Metagenome / Metatranscriptome Family F099592

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099592
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	62 residues
Representative Sequence	MLGYMSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Number of Associated Samples	78
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.17 %
% of genes near scaffold ends (potentially truncated)	37.86 %
% of genes from short scaffolds (< 2000 bps)	89.32 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (23.301 % of family members)
Environment Ontology (ENVO)	Unclassified (33.981 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.019 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.08% β-sheet: 6.15% Coil/Unstructured: 70.77%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00355	Rieske	57.28
PF00121	TIM	6.80
PF12146	Hydrolase_4	2.91
PF00162	PGK	1.94
PF09423	PhoD	1.94
PF07681	DoxX	1.94
PF04069	OpuAC	0.97
PF00198	2-oxoacid_dh	0.97
PF02780	Transketolase_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	6.80
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	1.94
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.94
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.94
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.34 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	53.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	53.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	53.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Paracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium	10.68 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	2.91 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.94 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.97 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Paracidobacterium acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	10.68 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2.91 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1.94 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.97 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Paracidobacterium acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	10.68 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2.91 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1.94 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.97 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10149566	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300002245\|JGIcombinedJ26739_100080689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3020	Open in IMG/M
3300004080\|Ga0062385_10941623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	576	Open in IMG/M
3300004080\|Ga0062385_11013190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	558	Open in IMG/M
3300004082\|Ga0062384_101174974	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300004082\|Ga0062384_101382995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	518	Open in IMG/M
3300004092\|Ga0062389_102887920	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300004092\|Ga0062389_104547403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	522	Open in IMG/M
3300004152\|Ga0062386_100463245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1026	Open in IMG/M
3300004635\|Ga0062388_102558663	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005591\|Ga0070761_10378595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	861	Open in IMG/M
3300005591\|Ga0070761_10591089	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005602\|Ga0070762_10257561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1087	Open in IMG/M
3300005995\|Ga0066790_10408610	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006176\|Ga0070765_100476670	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300007265\|Ga0099794_10425445	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300007788\|Ga0099795_10402456	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009665\|Ga0116135_1057481	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300010864\|Ga0126357_1170926	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010866\|Ga0126344_1270725	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010876\|Ga0126361_10207619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	795	Open in IMG/M
3300011120\|Ga0150983_14831483	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300011269\|Ga0137392_11266199	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012203\|Ga0137399_10696062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	855	Open in IMG/M
3300012929\|Ga0137404_10421598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1180	Open in IMG/M
3300014495\|Ga0182015_10033826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3908	Open in IMG/M
3300014501\|Ga0182024_10071770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5238	Open in IMG/M
3300014501\|Ga0182024_10268596	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300014501\|Ga0182024_12193268	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300018047\|Ga0187859_10726884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	566	Open in IMG/M
3300019187\|Ga0184584_106767	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300020579\|Ga0210407_11421708	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300020583\|Ga0210401_10061914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3524	Open in IMG/M
3300020583\|Ga0210401_10096863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2772	Open in IMG/M
3300021181\|Ga0210388_10842492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	793	Open in IMG/M
3300021181\|Ga0210388_11182030	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300021402\|Ga0210385_10875267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	690	Open in IMG/M
3300021403\|Ga0210397_11631190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	501	Open in IMG/M
3300021406\|Ga0210386_10499573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1051	Open in IMG/M
3300021406\|Ga0210386_11220930	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300021420\|Ga0210394_10280970	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300021474\|Ga0210390_10294618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1374	Open in IMG/M
3300021474\|Ga0210390_11102649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	645	Open in IMG/M
3300021477\|Ga0210398_11519879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	521	Open in IMG/M
3300022530\|Ga0242658_1112689	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300024288\|Ga0179589_10167812	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300027002\|Ga0209110_1024657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	713	Open in IMG/M
3300027692\|Ga0209530_1033646	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300027767\|Ga0209655_10088156	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300027795\|Ga0209139_10095887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1044	Open in IMG/M
3300027853\|Ga0209274_10430934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	682	Open in IMG/M
3300027855\|Ga0209693_10127506	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300027879\|Ga0209169_10265018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	901	Open in IMG/M
3300027895\|Ga0209624_10520766	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300027908\|Ga0209006_10758820	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300028746\|Ga0302233_10060433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1539	Open in IMG/M
3300028746\|Ga0302233_10210835	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300028747\|Ga0302219_10027293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2134	Open in IMG/M
3300028747\|Ga0302219_10119101	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300028789\|Ga0302232_10230119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	921	Open in IMG/M
3300028906\|Ga0308309_11054403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	703	Open in IMG/M
3300029943\|Ga0311340_10207234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1966	Open in IMG/M
3300029943\|Ga0311340_10836616	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300029943\|Ga0311340_11007608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	684	Open in IMG/M
3300029999\|Ga0311339_11581773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	580	Open in IMG/M
3300029999\|Ga0311339_11671641	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300030007\|Ga0311338_10922473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	856	Open in IMG/M
3300030043\|Ga0302306_10173183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	832	Open in IMG/M
3300030053\|Ga0302177_10317911	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300030399\|Ga0311353_10363623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1310	Open in IMG/M
3300030503\|Ga0311370_10018347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10814	Open in IMG/M
3300030520\|Ga0311372_11716082	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300030524\|Ga0311357_10482644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1157	Open in IMG/M
3300030618\|Ga0311354_10347826	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300031231\|Ga0170824_113754223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	665	Open in IMG/M
3300031231\|Ga0170824_115450540	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031233\|Ga0302307_10653238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	529	Open in IMG/M
3300031234\|Ga0302325_10840375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1287	Open in IMG/M
3300031236\|Ga0302324_100240804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2835	Open in IMG/M
3300031236\|Ga0302324_101955740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	738	Open in IMG/M
3300031236\|Ga0302324_102597950	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031446\|Ga0170820_10770312	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031524\|Ga0302320_11813709	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031525\|Ga0302326_11225353	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300031592\|Ga0310117_129661	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031708\|Ga0310686_100278063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300031708\|Ga0310686_105074057	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300031708\|Ga0310686_111817949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	822	Open in IMG/M
3300031708\|Ga0310686_114796236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	811	Open in IMG/M
3300031708\|Ga0310686_117925895	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300031753\|Ga0307477_10741021	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031754\|Ga0307475_10993585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	660	Open in IMG/M
3300031871\|Ga0316036_115896	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031955\|Ga0316035_113814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	626	Open in IMG/M
3300031962\|Ga0307479_10753143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	951	Open in IMG/M
3300032028\|Ga0316052_108362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	631	Open in IMG/M
3300032119\|Ga0316051_1012993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	708	Open in IMG/M
3300032515\|Ga0348332_11871342	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300032515\|Ga0348332_12285655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	750	Open in IMG/M
3300032515\|Ga0348332_12558075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	757	Open in IMG/M
3300033828\|Ga0334850_015361	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300034124\|Ga0370483_0059420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1217	Open in IMG/M
3300034124\|Ga0370483_0188801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.35%
Aquatic	Environmental → Aquatic	11.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.19%
Peat	Environmental → Terrestrial → Peat	25.24%
Freshwater	Environmental → Aquatic → Freshwater	11.65%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	25.24%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	25.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	23.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.97%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.97%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031592	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031955	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032028	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101495661	3300001593	Forest Soil	VYLKALQKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCKY*
JGIcombinedJ26739_1000806892	3300002245	Forest Soil	MSEKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY*
Ga0062385_109416231	3300004080	Bog Forest Soil	MLSSMSDKTHQSPTTPFYKKALRTWTYYIFPEGVQEEAGDFADEEAARVASWKTYRTWQANGCKY*
Ga0062385_110131901	3300004080	Bog Forest Soil	MLGYMSDKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY*
Ga0062384_1011749741	3300004082	Bog Forest Soil	MLGYMSDKTQQSPTVPVYNKALGKWTFYIFPEGVEQAAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0062384_1013829951	3300004082	Bog Forest Soil	MLSSMSDKTHQSPTTPFYKKALRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY*
Ga0062389_1028879202	3300004092	Bog Forest Soil	MLGYMSEKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY*
Ga0062389_1045474031	3300004092	Bog Forest Soil	MLGCMSDKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY*
Ga0062386_1004632451	3300004152	Bog Forest Soil	MLGYMSDKTQQSPTVPIYIKALRKWTYYIFPEGVEQEAGDFADEEAARAASWKTYRAWQANGCKY*
Ga0062388_1025586631	3300004635	Bog Forest Soil	YMSDKTQQSPTVPVYNKALGKWTFYIFPEGVEQAAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0070761_103785953	3300005591	Soil	MLSSMSDKTHQSPTTPFYKKAPRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY*
Ga0070761_105910891	3300005591	Soil	MSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCKY*
Ga0070762_102575612	3300005602	Soil	MLGCMSDKTQQSPTVPVYIKALRKWTFYIFPEGVEQEAGDFPDEEAARVASWKTYRTWQANGCKY*
Ga0066790_104086101	3300005995	Soil	QSPTVPFYKKAIRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY*
Ga0070765_1004766702	3300006176	Soil	MLGCMSDKTQQSPTVPVYKKDLRKWTFYIFPEGVQQEAGEFPDEEAARVASWKTYRTWQANGCKY*
Ga0099794_104254451	3300007265	Vadose Zone Soil	MSDKTQQSPTVPVYNKALGKWTFSIFPEGVEQVAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0099795_104024561	3300007788	Vadose Zone Soil	MLGCMSDKTQQSPTVPVFNKALGKWTFYIFPEGVEQAAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0116135_10574813	3300009665	Peatland	MLGYMSDKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY*
Ga0126357_11709262	3300010864	Boreal Forest Soil	MLGYMSDKTQQSPTVPVYNKVLRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY*
Ga0126344_12707251	3300010866	Boreal Forest Soil	TVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY*
Ga0126361_102076192	3300010876	Boreal Forest Soil	MLGYMSDKTHQSPTVPVYNKALRKWTYYIFPDGVEQEAGDFPDEEPARVASWKTYRASQANGC
Ga0150983_148314831	3300011120	Forest Soil	TQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCKY*
Ga0137392_112661992	3300011269	Vadose Zone Soil	MLGCMSDKTQQSPTVPVYNKALGKWTFSIFPEGVEQVAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0137399_106960622	3300012203	Vadose Zone Soil	MLGCMSDKTQQSPTVPVYNKALGKWTFYIFPEGVEQAAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0137404_104215982	3300012929	Vadose Zone Soil	MLGCMSDKTQQSPTVPVFNKALGKWTFYIFPEGVEQVAGDFPDEESARVASWKTYRTWQANGCKY*
Ga0182015_100338262	3300014495	Palsa	MSDKTQQSPTVPIYKKALQKWTYYIFPEGVEQEAGDFEDEETARVASWKTYRTWQANGCKY*
Ga0182024_100717702	3300014501	Permafrost	MLGYMSDKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARAASWKTYRTWQANGCKY*
Ga0182024_102685962	3300014501	Permafrost	MLACMSDKTQQSPTVPVYKKDLRKWTFYIFPEGVQQEAGEFPDEEAARVASWKTYRTWQANGCKY*
Ga0182024_121932682	3300014501	Permafrost	VPVYKKDLRKWTFYIFPEGVQQEAGEFPDEEAARVASWKTYRTWQANGCKY*
Ga0187859_107268841	3300018047	Peatland	MLGYMSDKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVSSWKTYRAWQANGCKY
Ga0184584_1067671	3300019187	Soil	QSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCKY
Ga0210407_114217082	3300020579	Soil	TVSVYNKALRKWTYFIFPAGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0210401_100619144	3300020583	Soil	MLLILFEPSTKKQNQPSERMLGYMNDKTQQSPSVPVYKKDLRKWTYYIFPNGVEQEAGDFADEEAARVSSWKTYRAWQANGCKY
Ga0210401_100968633	3300020583	Soil	MLGCMSDKTQQSPTVPVYIKALRKWTFYIFPEGVEQEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0210388_108424921	3300021181	Soil	MLGYMSDKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASW
Ga0210388_111820302	3300021181	Soil	MLGYMSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0210385_108752672	3300021402	Soil	MLGYMSDKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY
Ga0210397_116311902	3300021403	Soil	MLGYMSDKTQQSPTVPVYNKALRKWTYYLFPEGVEQEAGDSPDEETARVASWKTYRTWQANGCKY
Ga0210386_104995733	3300021406	Soil	MSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCK
Ga0210386_112209302	3300021406	Soil	MLGCMSDKTQQSPTVPVYKKDLRKWTFYIFPEGVQQEAGEFPDEEAARVASWKTYRTWQANGCKY
Ga0210394_102809703	3300021420	Soil	TQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0210390_102946182	3300021474	Soil	MLGYMNDKTQQSPSVPVYKKDLRKWTYYIFPNGVEQEAGDFADEEAARVSSWKTYRAWQANGCKY
Ga0210390_111026491	3300021474	Soil	MLGCMSDKTQQSPTVPVYIKALRKWTCYIFPEGVEQEAGDLPDEEAARVASWKTYRTWQANGCKY
Ga0210398_115198791	3300021477	Soil	MLGYMSDKTQQSPTVPVYIKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0242658_11126891	3300022530	Soil	QSPTVPVYIKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRSWQANGCKY
Ga0179589_101678123	3300024288	Vadose Zone Soil	MLGCMSDKTQQSPTVPVFNKALGKWTFYIFPEGVEQAAGDFPDEESARVASWKTYRTWQANGCKY
Ga0209110_10246573	3300027002	Forest Soil	MNDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARAASWKTYRAWQANGCK
Ga0209530_10336462	3300027692	Forest Soil	MSDKTQQSPTVPVYLKALQKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCK
Ga0209655_100881562	3300027767	Bog Forest Soil	MLSSMSDKTHQSPTTPFYKKALRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0209139_100958871	3300027795	Bog Forest Soil	MSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQ
Ga0209274_104309343	3300027853	Soil	SICGEPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCKY
Ga0209693_101275062	3300027855	Soil	MSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCK
Ga0209169_102650182	3300027879	Soil	MLSSMSDKTHQSPTTPFYKKAPRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0209624_105207661	3300027895	Forest Soil	HDQPVERMLGYMSEKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY
Ga0209006_107588201	3300027908	Forest Soil	MLSSMSEKTHQSPTTPFYKKAPRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0302233_100604333	3300028746	Palsa	MSDKTQQSPTVPIYKKALQKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCK
Ga0302233_102108352	3300028746	Palsa	MLGYMSEKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARAASWKTYRTWQANGCKY
Ga0302219_100272935	3300028747	Palsa	MSDKTQQSPTVPIYKKALQKWTYYIFPEGVEQEAGDFEDEETARVASWKTYRTWQANGCK
Ga0302219_101191012	3300028747	Palsa	MLGYMSEKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY
Ga0302232_102301191	3300028789	Palsa	HGAYARHMSEKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFEDEETARVASWKTYRTWQANGCKY
Ga0308309_110544031	3300028906	Soil	MLGYMSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGC
Ga0311340_102072343	3300029943	Palsa	MLGYMSDKMQQSPTVPFYDKALRKWTFYIFPEGVQKEAGDFQDEETARAASWKSYRAWQANDCRY
Ga0311340_108366163	3300029943	Palsa	LGYMSEKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARAASWKTYRTWQANGCKY
Ga0311340_110076082	3300029943	Palsa	MSDKTHQSPTVPIYKKDLQKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCK
Ga0311339_115817732	3300029999	Palsa	MLGYMNDKTQQSPSVPFYKKALQKWTYYIFPDGVEQEAGDFADEEAARVSSWKSYRAWQANGCKY
Ga0311339_116716412	3300029999	Palsa	MSEKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKMYRTWQANGCK
Ga0311338_109224732	3300030007	Palsa	MLGYMSDKTQQSPTVPVNIKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0302306_101731831	3300030043	Palsa	MLGYMSDKTQQSPTVPVYIKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRT
Ga0302177_103179111	3300030053	Palsa	PVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCKY
Ga0311353_103636232	3300030399	Palsa	MLGYMSEKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARAASWKTYRTWQA
Ga0311370_1001834711	3300030503	Palsa	MSEKTHQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCK
Ga0311372_117160822	3300030520	Palsa	MLGYMSEKTHQSPTVPVYIKALRKWTYYIFPEGVEQEAGDFPDEETARVASWKTYRAWQANGCKY
Ga0311357_104826442	3300030524	Palsa	MSDKTHQSPTTPFYKKALRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCK
Ga0311354_103478261	3300030618	Palsa	PVYNKALRKWTFYIFPEGVEQEAGDFPDEETARAASWKTYRTWQANGCKY
Ga0170824_1137542231	3300031231	Forest Soil	MLGYMSDKTHQSPTVPVYNKALRKWTFSIFPDGVEQVAGDFPDEETARLASWKSYRAWQANGCKY
Ga0170824_1154505401	3300031231	Forest Soil	MLGYMSDKTQQSPTVPVYNKALGKWTFSIFPEGVEQVAGDFPDEESARAASWKTYRTWQANGCKY
Ga0302307_106532381	3300031233	Palsa	MLSSMSDKTHQSPTTPFYKKALRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCK
Ga0302325_108403752	3300031234	Palsa	MSDKTHQSPTVPFYKKAIRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCK
Ga0302324_1002408041	3300031236	Palsa	MLSSMSDKTHQSPTVPFYKKAIRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0302324_1019557401	3300031236	Palsa	MLSSMSDKTHQSPTTPFYKKAPRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRAWQANGCKY
Ga0302324_1025979501	3300031236	Palsa	KTHQSPTTPFYKKALRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0170820_107703121	3300031446	Forest Soil	QQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0302320_118137093	3300031524	Bog	TTPFYKKAPRTWTYYIFPEGVQEEAGDFPDEETARVASWKTYRTWQANGCRY
Ga0302326_112253532	3300031525	Palsa	MLACMSDNTHQSPTVPFYKKALGKWTYYIFPEGVQKEAGDFPDEETARVASWKTYRAWQANDCKY
Ga0310117_1296612	3300031592	Soil	QQSPTVPVYLKALQKWTYYIFPEGVEQEAGDFADEETARVASWKMYRTWQANGCKY
Ga0310686_1002780631	3300031708	Soil	GGWRMLSSMSDKTHQSPTVPFYKKAIRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0310686_1050740573	3300031708	Soil	MLGYMSDKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRTWQANGCKY
Ga0310686_1118179493	3300031708	Soil	RMLSSMSEKTHQSPTTPFYKKAPRTWTYYIFPEGVEQEAGDFADEETARIASWKTYRTWQANGCKY
Ga0310686_1147962362	3300031708	Soil	MSDKTQQSPTVPVYNKALRKWTYFIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCK
Ga0310686_1179258953	3300031708	Soil	MLGCMSDKTQQSPTVPVYKKDLRKWTFYIFPEGVQQEAGDFADEEAARVASWKTYRTWQANGCKY
Ga0307477_107410211	3300031753	Hardwood Forest Soil	CMSDKTQQSPTVPVYNKALRKWTFSIFPEGVEQEAGEFPDEEAARAASWKTYRAWQANGCKY
Ga0307475_109935852	3300031754	Hardwood Forest Soil	MLGCMSDKTQQSPTVPVYNKALRKWTFYIFPEGVEQEAGDFPDEETARVASWKTYRT
Ga0316036_1158961	3300031871	Soil	QSPTVPVYLKALQKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCKY
Ga0316035_1138143	3300031955	Soil	ARHMSDKTQQSPTVPVYLKALQKWTYYIFPEGVEQEAGDFADEETARVASWKTYRTWQANGCKY
Ga0307479_107531432	3300031962	Hardwood Forest Soil	MLGCMSDKTQQSPTVPVYNKALRKWTFSIFPEGVEQEAGEFPDEEAARAASWKTYRAWQANGCKY
Ga0316052_1083621	3300032028	Soil	PTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCKY
Ga0316051_10129933	3300032119	Soil	AYARHMSDKTQQSPTVPVYNKALRKWTYYIFPEGVEQEAGDFADEETARVASWKTYRAWQANGCKY
Ga0348332_118713421	3300032515	Plant Litter	QQSPSVPVYKKDLRKWTFYIFPEGVQQEAGDFADEEAARVASWKTYRTWQANGCKY
Ga0348332_122856551	3300032515	Plant Litter	KTHQSPTVPFYKKAIRTWTYYIFPEGVQEEAGDFPDEEAARVASWKTYRTWQANGCKY
Ga0348332_125580753	3300032515	Plant Litter	KTQQSPTVPVYLKALQKWTYYIFPEGVEQEAGDFADEETARIASWKTYRTWQANGCKY
Ga0334850_015361_1266_1421	3300033828	Soil	VPIYKKALQKWTYYIFPEGVEQEAGDFEDEETARVASWKTYRTWQANGCKY
Ga0370483_0059420_259_456	3300034124	Untreated Peat Soil	MLGYMSDKTHQSPTVPVYNKALRKWTYYIFPDGVEQEAGDFPDEEAARVASWKTYRAWQANGCKY
Ga0370483_0188801_135_362	3300034124	Untreated Peat Soil	MRQQNQPAERMLAYMNEKTHQSPSVPVYKKALRTWTYYIFPEGVEQEAGDFADEEAARAASWKTYRAWQANGCKY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099592

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences