Metagenome / Metatranscriptome Family F099557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099557
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	77 residues
Representative Sequence	RVTARGSGGSYAPARLSTPSLPLSQPSAGVYIPPPVNNPSAQINQLNHSFPLNGGLGLNPTNRDSYIRYNLTR
Number of Associated Samples	88
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.03 %
% of genes from short scaffolds (< 2000 bps)	91.26 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.417 % of family members)
Environment Ontology (ENVO)	Unclassified (23.301 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.427 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.77% β-sheet: 0.00% Coil/Unstructured: 77.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04392	ABC_sub_bind	5.83
PF06628	Catalase-rel	2.91
PF00857	Isochorismatase	0.97
PF08734	GYD	0.97
PF13505	OMP_b-brl	0.97
PF02518	HATPase_c	0.97
PF05036	SPOR	0.97
PF14534	DUF4440	0.97
PF03713	DUF305	0.97
PF13467	RHH_4	0.97
PF02668	TauD	0.97
PF03992	ABM	0.97
PF14319	Zn_Tnp_IS91	0.97
PF01546	Peptidase_M20	0.97
PF12680	SnoaL_2	0.97
PF03797	Autotransporter	0.97
PF00873	ACR_tran	0.97
PF00496	SBP_bac_5	0.97
PF01925	TauE	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.83
COG0753	Catalase	Inorganic ion transport and metabolism [P]	2.91
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.97
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.97
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.97
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.35 %
Unclassified	root	N/A	1.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	86.41 %
Unclassified	root	N/A	1.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	76.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.80 %
Unclassified	root	N/A	1.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	76.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.85 %
Unclassified	root	N/A	1.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	76.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.88 %
Unclassified	root	N/A	1.94 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	76.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.88 %
Unclassified	root	N/A	1.94 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16597710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3394	Open in IMG/M
2088090014\|GPIPI_17278646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1399	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1097718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300000787\|JGI11643J11755_11720589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10005585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2924	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1057523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300002914\|JGI25617J43924_10209923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300005332\|Ga0066388_108199779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300005436\|Ga0070713_100189586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1852	Open in IMG/M
3300005439\|Ga0070711_100079124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2337	Open in IMG/M
3300005445\|Ga0070708_101097814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300005546\|Ga0070696_100920080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300005713\|Ga0066905_101104351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300005713\|Ga0066905_102236157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300005764\|Ga0066903_105312278	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300006177\|Ga0075362_10193823	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300006581\|Ga0074048_10006869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300006581\|Ga0074048_11885973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300007076\|Ga0075435_100286499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1407	Open in IMG/M
3300009038\|Ga0099829_11232156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300009090\|Ga0099827_10046309	All Organisms → cellular organisms → Bacteria → Proteobacteria	3248	Open in IMG/M
3300009147\|Ga0114129_10595256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1433	Open in IMG/M
3300009156\|Ga0111538_12735803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300009168\|Ga0105104_10017821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4222	Open in IMG/M
3300010043\|Ga0126380_10668076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300010043\|Ga0126380_10675146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300010043\|Ga0126380_11877988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300010046\|Ga0126384_10344850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1239	Open in IMG/M
3300010046\|Ga0126384_11378314	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010047\|Ga0126382_11404038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300010047\|Ga0126382_11976752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300010047\|Ga0126382_12114864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300010321\|Ga0134067_10060061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1241	Open in IMG/M
3300010335\|Ga0134063_10724519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300010360\|Ga0126372_11469284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300010376\|Ga0126381_101133404	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300010376\|Ga0126381_102663559	Not Available	715	Open in IMG/M
3300010398\|Ga0126383_12656968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300010400\|Ga0134122_11554698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300012189\|Ga0137388_11253594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300012202\|Ga0137363_10269744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1388	Open in IMG/M
3300012202\|Ga0137363_11045638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300012205\|Ga0137362_10797614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	809	Open in IMG/M
3300012205\|Ga0137362_11473313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300012207\|Ga0137381_11414047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300012209\|Ga0137379_11092716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300012211\|Ga0137377_10225633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1800	Open in IMG/M
3300012582\|Ga0137358_10871926	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012882\|Ga0157304_1033581	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012923\|Ga0137359_10076411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2935	Open in IMG/M
3300012923\|Ga0137359_11208942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300012929\|Ga0137404_11627695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300012971\|Ga0126369_12894455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300012984\|Ga0164309_11048992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300012984\|Ga0164309_11698877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300012986\|Ga0164304_10617711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300014968\|Ga0157379_12505163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300016294\|Ga0182041_11673405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300016319\|Ga0182033_10987777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300016341\|Ga0182035_10874870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300016341\|Ga0182035_11091237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300016357\|Ga0182032_10079536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2247	Open in IMG/M
3300016371\|Ga0182034_10380765	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300018071\|Ga0184618_10498300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300018078\|Ga0184612_10415893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300018429\|Ga0190272_12994333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300019875\|Ga0193701_1033673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300021088\|Ga0210404_10913589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300021403\|Ga0210397_11496661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300021405\|Ga0210387_11861538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300021478\|Ga0210402_11370721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300025910\|Ga0207684_11692193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300025920\|Ga0207649_10610807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300025922\|Ga0207646_10377610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1280	Open in IMG/M
3300028712\|Ga0307285_10114206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300028755\|Ga0307316_10266055	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300028784\|Ga0307282_10403101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300028787\|Ga0307323_10062488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1319	Open in IMG/M
3300028876\|Ga0307286_10149391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300029636\|Ga0222749_10160930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300030904\|Ga0308198_1032791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300030997\|Ga0073997_12040673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300031200\|Ga0307496_10112371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031544\|Ga0318534_10317166	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300031713\|Ga0318496_10014164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3845	Open in IMG/M
3300031724\|Ga0318500_10143427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1119	Open in IMG/M
3300031744\|Ga0306918_10872470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031748\|Ga0318492_10587486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300031859\|Ga0318527_10395342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300031860\|Ga0318495_10285837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300031890\|Ga0306925_11283675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300031896\|Ga0318551_10281940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300031912\|Ga0306921_11748981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300031941\|Ga0310912_10833465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031946\|Ga0310910_10600964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	872	Open in IMG/M
3300031981\|Ga0318531_10165304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300032035\|Ga0310911_10255689	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300032059\|Ga0318533_10709712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300032060\|Ga0318505_10315914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300032065\|Ga0318513_10269184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300032261\|Ga0306920_101394779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300034644\|Ga0370548_099224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.26%
Plants	Host-Associated → Plants	5.83%
Aquatic	Environmental → Aquatic	2.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.85%
Sediment	Environmental → Aquatic → Sediment	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.58%
Loam	Environmental → Terrestrial → Soil → Loam	10.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00059820	2088090014	Soil	RAARRGSGGPYAPARLTPPSLPLAQQSTGVYIPPPVSNPSAQINQLNQSFQFNRGLGNNPTGRDSFIRYNLTR
GPIPI_00242420	2088090014	Soil	EAPTPRGPRRRARGSGGAYVPAYQPTPSLPQSQASTGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR
AF_2010_repII_A100DRAFT_10977181	3300000655	Forest Soil	RPRVTSRGSGGIYAPARLSPPSLGLPQQSTGVYIPPPVNNPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR*
JGI11643J11755_117205891	3300000787	Soil	QRAERPRGTARGSGGPYIAAPLRPPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR*
AF_2010_repII_A001DRAFT_100055854	3300000793	Forest Soil	RPRVTRRGSGGIYAPAYLSPPTVGLSQPSAAPYIPPPVANPSAQINQLNQSFPLNGGLGNNPTNRDAFIRYNLTR*
AP72_2010_repI_A100DRAFT_10575231	3300000837	Forest Soil	KRAARPRVTSRGSGGIYAPARLTPPSLGLPQQSTGVYIPPPVSNPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR*
JGI25617J43924_102099232	3300002914	Grasslands Soil	EQATKPAVRSRITARGSGGLYAPARLSPPSLALPQQSTGVYIPPPINNPSAQINQLNQSFPLNRGLGNNPTDRDSFIRYNLTR*
Ga0066388_1081997791	3300005332	Tropical Forest Soil	VTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0070713_1001895861	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QETKGAQQRPRVTARGSGGPYIAPVQRTPSLSLPQPSASPYIPPPINNPSERIKQLNESFPLNGGLGNNPTNRDDYIRYNLTR*
Ga0070711_1000791241	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RVGTRLAAPRRRAARRGSGGPYAPTRLTAPSLPLAQQSTGVYIPPPVSNPSAQINQLNQSFQFNRGLGNNPTGRDSFIRYNLTR*
Ga0070708_1010978141	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ARGSGGLYAPARLSPPSLALPQQSTGVYIPPPINNPSAQINQLNQSFPLNRGLGNNPTDRDSFIRYNLTR*
Ga0070696_1009200801	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RVTARGSGGSYAPARLSTPSLPLSQPSAGVYIPPPVNNPSAQINQLNHSFPLNGGLGLNPTNRDSYIRYNLTR*
Ga0066905_1011043511	3300005713	Tropical Forest Soil	EQEQPTKRAERPRVTARGSGGSYAPAPLSTPSLPLSQPSAGVYIPPPVSNPSAQINQLNHSFPLNGGLGLNPTNRDAYIRYNLTR*
Ga0066905_1021447021	3300005713	Tropical Forest Soil	ERPERSRLTVRGSSGRYVAPVQRAPSLTLSQPSSGPYIPPPVANPSERINQLNQSFPLNGGLGLNPSDRDSYIRYNLNR*
Ga0066905_1022361571	3300005713	Tropical Forest Soil	RPRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0066903_1053122781	3300005764	Tropical Forest Soil	GQETSKRTKRPQVSARGSGTYVAPLVPPTPSLTLTQPSVTPYIPPPINNPSERVMQYNQSFPFNAGLGNNPTGRDAYIRYNLNR*
Ga0075362_101938231	3300006177	Populus Endosphere	TQRAERPRLTVRGSGGRYVAPVQRAPSLTLSQPSAGPYIPPPVNNPSERINQLNQSFPLNGGLGNNPTNRDAYIRYNLNR*
Ga0074048_100068692	3300006581	Soil	EEQQQTQPSERAERPRGTARGSGGPYIAAPLRAPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLNR*
Ga0074048_118859732	3300006581	Soil	TARGSGGPYIAPVQRTPSLTLTQPSTGPYIPPPISNPSAQINQLNQSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0075435_1002864991	3300007076	Populus Rhizosphere	GSGGAYIPAYQPTPSLPQSQASTGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR*
Ga0099829_112321561	3300009038	Vadose Zone Soil	PRITARGSGGLYAPARLSPPSLALPQQSTGVYIPPPINNPSAQINQLNQSFPLNRGLGNNPTDRDSFIRYNLTR*
Ga0099827_100463091	3300009090	Vadose Zone Soil	AERTRVTRRGSSGAYNPAPLTPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLTR*
Ga0114129_105952561	3300009147	Populus Rhizosphere	PRVTTRGSGGIYAPARLSPPSLALPQQSTGVYIPPPINNPSAQINQLNQSFPVNRGLGNNPTDRDAYIRYNLTR*
Ga0111538_127358031	3300009156	Populus Rhizosphere	RRARGSGGAYIPAYQPTPSLPQSQASTGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR*
Ga0105104_100178211	3300009168	Freshwater Sediment	GEAQQEPAAERPGRSRLTVRGSGGRYVAPPQRAPSLTLSQPSTGPYIPPPVANPSERITQLNQSFPLNGGLGNNPTNRDAYIRYNFNR*
Ga0126380_106680763	3300010043	Tropical Forest Soil	VTARGSGGSYAPARLSTPSLGLPQPSTGVYIPPPINNPSAQINQLNQSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0126380_106751461	3300010043	Tropical Forest Soil	VTARGSGGSYAPARLSTSPGLPQPSTGVYIPPPISNPSAQINQLNHSFPLNGGLGLNPTDRGAYIRYNLTR*
Ga0126380_118779881	3300010043	Tropical Forest Soil	RRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0126384_103448501	3300010046	Tropical Forest Soil	PVRRRVTARGSGGSYAPARLRTPSLGPPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTGRDAYIRYNLTR*
Ga0126384_113783142	3300010046	Tropical Forest Soil	RRRVRGSGGPYIPAYQPAPSLPLSQPSVGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR*
Ga0126382_114040381	3300010047	Tropical Forest Soil	AERPRITRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0126382_119767522	3300010047	Tropical Forest Soil	PRVTARGSGGSYAPAPLSTPSLPLSQPSAGVYIPPPVSNPSAQINQLNHSFPLNGGLGLNPTNRDSYIRYNLTR*
Ga0126382_121148642	3300010047	Tropical Forest Soil	EQQATKRAARARVTSRGSGGIYAPARLSPPSLALPQQPTGVYIPPPVSNPSAQIDQLNHSFPLSRGLGNNPTDRDSFIRYNLTR*
Ga0134067_100600611	3300010321	Grasslands Soil	QATKPAVRPRVTRRGSGGIYAPARLTPPSLALPQQSTGVYIPPPVNNPSAQINQLNQSFPLNRGLGNNPTDRDAFIRYNLTR*
Ga0134063_107245191	3300010335	Grasslands Soil	RVTRRGSGGIYAPARLTSPSLALPQQSTGVYIPPPVNNPSAQIDQLNHSFPLNRGLGNNPTDRDAFIRYNLTR*
Ga0126372_114692842	3300010360	Tropical Forest Soil	RGERTRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR*
Ga0126381_1011334042	3300010376	Tropical Forest Soil	GSSGAYNPAPLTPPSLPLSQPSTGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0126381_1026635592	3300010376	Tropical Forest Soil	LTARGSSGTYITPPLRTPSRSLPEPSAGPYIPPPINNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR*
Ga0126383_126569681	3300010398	Tropical Forest Soil	SSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR*
Ga0134122_115546982	3300010400	Terrestrial Soil	GTRLAAPRRRAARRGSGGPYVPARLIPPSLPQQSTGVYIPPPVSNPSAQINQLNQSFQFNKGLGNNPTGRDSFIRYNLTR*
Ga0137388_112535941	3300012189	Vadose Zone Soil	EQATKPAVRPRITARGSGGLYAPARLSPPSLALPQQSTGVYIPPPINNPSAQINQLNQSFPLNRGLGNNPTDRDSFIRYNLTR*
Ga0137363_102697443	3300012202	Vadose Zone Soil	TRRGSSGAYNPAPLTPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLTR*
Ga0137363_110456381	3300012202	Vadose Zone Soil	PRVTARGSGGPYAPARLSTPSLPLSQPSTGVYIPPPVSNPSAQINQLNHSFPLNQGLGHNPTDRDAYIRYNLTR*
Ga0137362_107976142	3300012205	Vadose Zone Soil	VTARGSGGSYAPARLSTPSLPLSQPSAGVYIPPPVNNPSAQINQLNHSFPLNGGLGLNPTNRDAYIRYNLTR*
Ga0137362_114733131	3300012205	Vadose Zone Soil	EQATKPVVRPRITSRGSGGIYAPARLTPPSVPLAQPSTGVYIPPAVSNPSAQIHDLNQGFQFNRGLGNNPTDRDSFIRYNLTR*
Ga0137381_114140471	3300012207	Vadose Zone Soil	TTRAQRPRVTARGSGGSYAPARLSTPSLPLSQPSAGVYIPPPVNNPSAQINQLNHSFPLNGGLGLNPTNRDSYIRYNLTR*
Ga0137379_110927161	3300012209	Vadose Zone Soil	RGSGGIYAPARLTPPSLGLPQQSTGVYIPPPVNNPSAQIDQLNHSFPLNRGLGNNPTDRDAFIRYNLTR*
Ga0137377_102256331	3300012211	Vadose Zone Soil	KPAVRRRVTTRGSGGIYAPARLTPPSLGLPQQSTGVYIPPPVNNPSAQIDQLNHSFPLNRGLGNNPTDRDAFIRYNLTR*
Ga0137358_108719261	3300012582	Vadose Zone Soil	RGSGGPYIPSLQPTPSLPVPQASVGTYIPPPVNNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR*
Ga0157304_10335811	3300012882	Soil	PRVTARGSGGPYIAPVQRTPSLSLPQPSASPYIPPPINNPSERIKQLNESFPLNGGLGNNPTNRDEYIRYNLTR*
Ga0137359_100764111	3300012923	Vadose Zone Soil	TKPVVRPRITSRGSGGIYAPARLTPPSVPLAQPSTGVYIPPAVSNPSAQIHDLNQGFQFNRGLGNNPTDRDSFIRYNLTR*
Ga0137359_112089422	3300012923	Vadose Zone Soil	ERTRITRRGSSGAYNPAPLTPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLTR*
Ga0137404_116276951	3300012929	Vadose Zone Soil	PRVTTRGSGGPYAPARLSTPSLALPQQSAAPYIPPPINNPSGQINQLNQSFPLNRGLGNNPTDRDAYIRYNLTR*
Ga0126369_128944552	3300012971	Tropical Forest Soil	PTNRAERRRLTARGSAGSYAPARLSTPSLPLSQPSTGVYIPPPVSNPSAQINQLNHSLPLNGGLGLNPTNRDAYIRYNLTK*
Ga0164309_110489921	3300012984	Soil	KPARAGTRLAAPRRRAARRGSGGPYAPARLTPPSLPLAQQSTGVYIPPPVSNPSAQINQLNQSFQFNKGLGNNPTDRDSFIRYNLTR*
Ga0164309_116988771	3300012984	Soil	SGEQETKGAQQRPRVTARGSGGPYIAPVQRTPSLSLPQPSASPYIPPPINNPSERIKQLNESFPLNGGLGNNPTNRDDYIRYNLTR*
Ga0164304_106177112	3300012986	Soil	PTPRGPRRRARGSGGAYIPAYQPTPSLPQSQASTGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR*
Ga0157379_125051632	3300014968	Switchgrass Rhizosphere	VTTRGSSGSYVAPPPRTPSLTLTQPSAGAYISPPGNNPSERIHQLNQSFPLNGGLGNNPTHRDAYIRYNLTR*
Ga0182041_116734052	3300016294	Soil	ERTRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR
Ga0182033_109877772	3300016319	Soil	VTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR
Ga0182035_108748702	3300016341	Soil	ERTRVTRRGSSGAYNPAPLTPPSLPLSQPSTGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLTR
Ga0182035_110912372	3300016341	Soil	PVRRRVTARGSGGSYAPARLSTPSLGLPQPSTGVYIPPPINNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0182032_100795361	3300016357	Soil	RGSGGSYAPARLSTPSLGLPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0182034_103807651	3300016371	Soil	AERSRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0184618_104983001	3300018071	Groundwater Sediment	RGSSGAYIAPLQRTPSLALPQPSAAPYIPPPVNNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0184612_104158931	3300018078	Groundwater Sediment	RGSGGPYIAAPLRTPSLTLTQPPAGPYIPPPVNNPSERINQLNQSFPLNRGLGNNPTDRDAYIRYNLNR
Ga0190272_129943332	3300018429	Soil	QQQEQKQPTQRAERPRVTPRGSSGRYIASPQPTPSLTLTQPSVGPYIPPPVNNPSERINQLNQSFPLNRGLGNNPTDRDAYIRYNLNR
Ga0193701_10336731	3300019875	Soil	TQRAGRSRVTARGSGGPYMAAPLRPPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR
Ga0210404_109135892	3300021088	Soil	PRGPRRRARGSGGPYIPAYQPTPSLPQSQASTGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR
Ga0210397_114966611	3300021403	Soil	RARGSGGAYIPAYQPTPSLPQSQASTGVYIPPPVSNPSAQINQLNQSFPFNAGLGNNPTNRDAYIRYNLTR
Ga0210387_118615381	3300021405	Soil	RITRRGSSGAYNPAVLTPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLTR
Ga0210402_113707211	3300021478	Soil	ARRGSGGPYAPARLTPPSLPLAQQSTGVYIPPPVSNPSAQINQLNQSFQFNRGLGNNPTGRDSFIRYNLTR
Ga0207684_116921931	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GEEQATTRAQRPRVTARGSGGSYAPARLSTPSLPLSQPSAGVYIPPPVNNPSAQINQLNHSFPLNGGLGLNPTNRDAYIRYNLTR
Ga0207649_106108072	3300025920	Corn Rhizosphere	QRAAPAGEQETKGAPRPRVTARGSGGPYIAPVQRTPSLSLPQPSASPYIPPPINNPSERIKQLNESFPLNGGLGNNPTNRDEYIRYNLTR
Ga0207646_103776102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AAPRRRVARRGSGGPYAPARLTPPSLPLAQQSTGVYIPPPVSNPSAQINQLNQSFQFNRGLGNNPTGRDSFIRYNLTR
Ga0307285_101142061	3300028712	Soil	ARGEEQQQTQPTQRAGRPRVTARGSGGPYIAAPLRAPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR
Ga0307316_102660551	3300028755	Soil	RAGRPRVTARGSGGPYIAAPLRAPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR
Ga0307282_104031012	3300028784	Soil	RGEEQQQTQPTQRAGRPRVTARGSGGPYIAAPLRAPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR
Ga0307323_100624882	3300028787	Soil	QATKRAERPRLTARGSSGAYIAPLQRTPSLSLPQPSAAPYIPPPVNNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0307286_101493913	3300028876	Soil	EQATKRAERPRLTARGSGGPYIAPVQRTPSLTLTQPSTGPYIPPPISNPSAQINQLNQSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0222749_101609301	3300029636	Soil	PKRAERTRITRRGSSGAYNPAVLTPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLPR
Ga0308198_10327911	3300030904	Soil	PTQRAERPRVTSRGSGGPYIAAPLRTPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR
Ga0073997_120406733	3300030997	Soil	EEPEQAIKREQRPRLTTRGSSGPYVAPIQRTPSLSLPQSPAAVYTPPPINNPSEQIKQLNESFPLNRGLGNNPTNRDEYLRYNLTR
Ga0307496_101123712	3300031200	Soil	EQQQTQPAQRAGRSRVTARGSGGPYIAAPLRPPSLTLTQPSAGPYIPPPINNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLTR
Ga0318534_103171661	3300031544	Soil	VRRRVTARGSGGSYAPTRLSTPSLGLPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTGRDAYIRYNLTR
Ga0318496_100141644	3300031713	Soil	PPVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0318500_101434273	3300031724	Soil	VTQRPVRRRVTARGSGGSYAPARLSTPSLGLPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTGRDAYIRYNLTR
Ga0306918_108724701	3300031744	Soil	CGERTRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR
Ga0318492_105874862	3300031748	Soil	VTTRGSGGPYAPARLSTPSLALPQPSAGPYIPPPVNNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0318527_103953421	3300031859	Soil	GEEQATKPAPRPRVTRRGSGGIYAPAYLSPPTVGLSQPSAAPYIPPPVANPSAQINQLNQSFPLNGGLGNNPTNRDAFIRYNLTR
Ga0318495_102858372	3300031860	Soil	ITQRPVRRRVTTRGSGGPYAPARLSTPSLALPQPSAGPYIPPPVNNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0306925_112836752	3300031890	Soil	RVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR
Ga0318551_102819403	3300031896	Soil	EEEVTQRPVRRRVTARGSGGSYAPARLSTPSLGLPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTGRDAYIRYNLTR
Ga0306921_117489812	3300031912	Soil	RTRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR
Ga0310912_108334651	3300031941	Soil	TQRPVRRRVTTRGSGGPYAPARLSTPSLALPQPSAGPYIPPPVNNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0310910_106009641	3300031946	Soil	RAARRGSGGPYAPARLTPPSLPLAQPSTGVYIPPPVSNPSAQINQLNQSFQFNRGLGNNPTGRDSFIRYNLTR
Ga0318531_101653041	3300031981	Soil	TRRGSSGAYNPALLTPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDAYIRYNLTR
Ga0310911_102556891	3300032035	Soil	RRRVTARGSGGSYAPARLSTPSLGLPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTGRDAYIRYNLTR
Ga0318533_107097121	3300032059	Soil	ADGWDRGSGGSYAPAPLSTPSLPLSQPSAGVYIPPPVSNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0318505_103159142	3300032060	Soil	QEEVTQRPVRRRVTTRGSGGPYAPARLSTPSLALPQPSAGPYIPPPVNNPSAQINQLNHSFPLNGGLGNNPTNRDAYIRYNLTR
Ga0318513_102691843	3300032065	Soil	ARGSGGSYAPTRLSTPSLGLPQPSTGVYIPPPISNPSGQINQLNHSFPLNGGLGNNPTGRDAYIRYNLTR
Ga0306920_1013947791	3300032261	Soil	RGERTRVTRRGSSGAYNPALLSPPSLPLSQPSAGVYIPPPVANPSAQINQLNQSFPLNGGLGLNPTNRDSYIRYNLTR
Ga0370548_099224_3_257	3300034644	Soil	QTQPTQRAERLRVTARGSGGPYIAAPLRTPSLTLTQPSVTPYIPPPVNNPSERINQLNQSFPLNGGLGNNPTNRDDYIRYNLNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences