NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F099554

Metagenome Family F099554

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099554
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 94 residues
Representative Sequence VLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAAYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Number of Associated Samples 78
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 40.78 %
% of genes near scaffold ends (potentially truncated) 32.04 %
% of genes from short scaffolds (< 2000 bps) 85.44 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.078 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.505 % of family members)
Environment Ontology (ENVO) Unclassified
(32.039 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(35.922 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 66.67%    β-sheet: 0.00%    Coil/Unstructured: 33.33%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF04964Flp_Fap 13.59
PF01478Peptidase_A24 2.91
PF09594GT87 1.94
PF16976RcpC 1.94
PF08308PEGA 1.94
PF07811TadE 1.94
PF00072Response_reg 0.97
PF02643DUF192 0.97
PF13519VWA_2 0.97
PF10812DUF2561 0.97
PF00884Sulfatase 0.97
PF02894GFO_IDH_MocA_C 0.97
PF02038ATP1G1_PLM_MAT8 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 13.59
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.97
COG1430Uncharacterized conserved membrane protein, UPF0127 familyFunction unknown [S] 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.08 %
UnclassifiedrootN/A35.92 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c2108414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium848Open in IMG/M
3300000858|JGI10213J12805_10782637Not Available585Open in IMG/M
3300000956|JGI10216J12902_100481755Not Available721Open in IMG/M
3300000956|JGI10216J12902_101144491All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2838Open in IMG/M
3300000956|JGI10216J12902_101380918All Organisms → cellular organisms → Bacteria → Acidobacteria3998Open in IMG/M
3300000956|JGI10216J12902_102195826Not Available843Open in IMG/M
3300000956|JGI10216J12902_103685913All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium903Open in IMG/M
3300000956|JGI10216J12902_111336076Not Available826Open in IMG/M
3300000956|JGI10216J12902_112041397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1767Open in IMG/M
3300000956|JGI10216J12902_112134735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium872Open in IMG/M
3300004157|Ga0062590_102807911Not Available520Open in IMG/M
3300004463|Ga0063356_100833031Not Available1292Open in IMG/M
3300004463|Ga0063356_103732606Not Available656Open in IMG/M
3300004463|Ga0063356_104903643Not Available575Open in IMG/M
3300005093|Ga0062594_100607261Not Available960Open in IMG/M
3300005290|Ga0065712_10784303Not Available517Open in IMG/M
3300005293|Ga0065715_10854069Not Available590Open in IMG/M
3300005295|Ga0065707_10145461All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1720Open in IMG/M
3300005333|Ga0070677_10074656All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300005353|Ga0070669_100916405All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium749Open in IMG/M
3300005356|Ga0070674_100276779Not Available1328Open in IMG/M
3300005471|Ga0070698_101711253All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300006046|Ga0066652_101054663Not Available770Open in IMG/M
3300006178|Ga0075367_10492672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium777Open in IMG/M
3300006844|Ga0075428_100000017All Organisms → cellular organisms → Bacteria147833Open in IMG/M
3300006845|Ga0075421_100664425All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300006846|Ga0075430_100674926All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300006876|Ga0079217_10006763All Organisms → cellular organisms → Bacteria → Proteobacteria3487Open in IMG/M
3300006876|Ga0079217_10066624All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300006880|Ga0075429_100942543Not Available755Open in IMG/M
3300006894|Ga0079215_10778807All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300006918|Ga0079216_10262072All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium995Open in IMG/M
3300006918|Ga0079216_11799052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300006918|Ga0079216_11996309Not Available503Open in IMG/M
3300007004|Ga0079218_10140896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1741Open in IMG/M
3300007004|Ga0079218_10466444All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300007004|Ga0079218_11031475Not Available829Open in IMG/M
3300007004|Ga0079218_11072328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300009094|Ga0111539_10000002All Organisms → cellular organisms → Bacteria983359Open in IMG/M
3300009147|Ga0114129_10720896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1280Open in IMG/M
3300009609|Ga0105347_1009499All Organisms → cellular organisms → Bacteria → Proteobacteria3366Open in IMG/M
3300010036|Ga0126305_10018953All Organisms → cellular organisms → Bacteria → Proteobacteria3594Open in IMG/M
3300010037|Ga0126304_10215207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1258Open in IMG/M
3300010041|Ga0126312_11457264Not Available507Open in IMG/M
3300010045|Ga0126311_10340069All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1141Open in IMG/M
3300010166|Ga0126306_11386150Not Available581Open in IMG/M
3300011400|Ga0137312_1013294All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300011415|Ga0137325_1018622All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1377Open in IMG/M
3300011422|Ga0137425_1009234All Organisms → cellular organisms → Bacteria1962Open in IMG/M
3300014265|Ga0075314_1086897Not Available660Open in IMG/M
3300014866|Ga0180090_1087065Not Available559Open in IMG/M
3300014875|Ga0180083_1145820All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300015248|Ga0180079_1034019Not Available700Open in IMG/M
3300015373|Ga0132257_101833486Not Available780Open in IMG/M
3300017789|Ga0136617_10606281All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium858Open in IMG/M
3300018051|Ga0184620_10168365Not Available716Open in IMG/M
3300018063|Ga0184637_10439482All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium770Open in IMG/M
3300018067|Ga0184611_1008841All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2797Open in IMG/M
3300018072|Ga0184635_10048428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1637Open in IMG/M
3300018079|Ga0184627_10064456All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1909Open in IMG/M
3300018084|Ga0184629_10455759Not Available670Open in IMG/M
3300018422|Ga0190265_11558723Not Available773Open in IMG/M
3300018429|Ga0190272_10046860All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2472Open in IMG/M
3300018429|Ga0190272_10653497All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium935Open in IMG/M
3300018429|Ga0190272_12571284Not Available556Open in IMG/M
3300018432|Ga0190275_10051999All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3425Open in IMG/M
3300018432|Ga0190275_10059708All Organisms → cellular organisms → Bacteria3224Open in IMG/M
3300018469|Ga0190270_10343278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1353Open in IMG/M
3300018469|Ga0190270_10975248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium872Open in IMG/M
3300018469|Ga0190270_12578940All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300018469|Ga0190270_13432741Not Available503Open in IMG/M
3300019377|Ga0190264_10551828Not Available806Open in IMG/M
3300020020|Ga0193738_1033638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1584Open in IMG/M
3300020020|Ga0193738_1073627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1003Open in IMG/M
3300021412|Ga0193736_1008543All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1260Open in IMG/M
3300025289|Ga0209002_10535733Not Available641Open in IMG/M
3300025325|Ga0209341_10325510All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1261Open in IMG/M
3300025926|Ga0207659_10983819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300025930|Ga0207701_10181177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1858Open in IMG/M
3300025937|Ga0207669_10244141All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300027533|Ga0208185_1077175Not Available789Open in IMG/M
3300027637|Ga0209818_1003129All Organisms → cellular organisms → Bacteria3195Open in IMG/M
3300027886|Ga0209486_10145905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1299Open in IMG/M
3300027886|Ga0209486_10411462Not Available822Open in IMG/M
3300027907|Ga0207428_10000004All Organisms → cellular organisms → Bacteria727800Open in IMG/M
3300028889|Ga0247827_11084653Not Available549Open in IMG/M
3300030606|Ga0299906_10095298Not Available2367Open in IMG/M
3300030619|Ga0268386_10696984Not Available663Open in IMG/M
3300031228|Ga0299914_11136673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300031229|Ga0299913_11495470Not Available629Open in IMG/M
3300031548|Ga0307408_100423280All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1149Open in IMG/M
3300031858|Ga0310892_11352723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300031901|Ga0307406_10388013All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300031908|Ga0310900_10046990All Organisms → cellular organisms → Bacteria2510Open in IMG/M
3300031908|Ga0310900_10895123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300031943|Ga0310885_10271733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium866Open in IMG/M
3300031944|Ga0310884_10869896Not Available555Open in IMG/M
3300031995|Ga0307409_100874830All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium911Open in IMG/M
3300032017|Ga0310899_10407381All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300032157|Ga0315912_10536997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium931Open in IMG/M
3300033407|Ga0214472_11051414Not Available717Open in IMG/M
3300034147|Ga0364925_0055201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1356Open in IMG/M
3300034147|Ga0364925_0121821All Organisms → cellular organisms → Bacteria935Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil12.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.68%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil7.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.83%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.94%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.97%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300011400Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2EnvironmentalOpen in IMG/M
3300011415Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300014265Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2EnvironmentalOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300014875Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10DEnvironmentalOpen in IMG/M
3300015248Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10DEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300021412Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_210841413300000033SoilMALAMCNKVVWKRVRDLAATLAVLAVLFAMLMAINPRVRERFAEMTASVQGRDMNSSIGPVGNAAHAAMSIGSDYASDNPFLFAFLVVAVVLFMLMLRS*
JGI10213J12805_1078263723300000858SoilRVRELCVPAGACVPQSGTRAPQRTQRRHLAAYCKQGTALATSNEAVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
JGI10216J12902_10048175523300000956SoilMVLAIHIKVVKKKARELGATLAVLAVLFGMLMAINPQVRERFSEMTASMKSGEMNSSIGPMGNAAYAAVSVGSDYAADNPFLFSFLVVAVILFMLMLRN*
JGI10216J12902_10114449113300000956SoilLAATLAMLVVLFGLLMAINPRVRERFGEMTMSVQGRDVNASFGPLGNAAYAAMSIGQDYAVDNPILFSFLVVAVVLFMLMLRT*
JGI10216J12902_10138091823300000956SoilLAATAAVLVVLFGMLMAINPRVRERFGEMSASVQTRDVNSSLGPVGNAAHAAMSIGTDYAADNPVLFSFLVVAVVLFMLMLRS*
JGI10216J12902_10219582623300000956SoilMSIKVVLKKARDFAATLGVLMVLFGMLMAINPRVREKFAAIMSTRGTDMNSSLGPVSNAAYAAMSIGSDYASDNPYLFSFLVVAIVLFMLMVRS*
JGI10216J12902_10368591313300000956SoilRDLAMTLAVLVVLFGMLMATNPRVRGQFAEMTKTAEGRESLGHVQNAAYAAIAIGSDYAGDNPFLFSFLVAAVVLFILMLRS*
JGI10216J12902_11133607623300000956SoilMGCAGEGTVLAMCIKVVWKKVRDLAATLAVLAVLFGMLMAINPRVREKFAQMMSTRGGDVNSSIGPVSNAAYAAMSIGSDYASDNPYLFSFLVVAVVLFMLMVRS*
JGI10216J12902_11204139713300000956SoilVLKKVRDLAATLGVLVLLFGMLMVINPRVRERFTEMTASVQGRESLGPVQNAAYAAMSIGSDYAADNPFLFSFLVVAVVLFMLMLRT*
JGI10216J12902_11213473523300000956SoilVLKKIQDLAATLAVLALLFGTIMAFNPRVHERFNEMTANVQGRESLGPVRNAAYAVMSIGADYASDNPFLFTFTVAAVVLFMLMLRS*
Ga0062590_10280791113300004157SoilLAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAIDNPILFSFLVVAVVLF
Ga0063356_10083303113300004463Arabidopsis Thaliana RhizosphereMAATLAVLAVLFGTIMAVNPRVHERFNEMTANVQGRESLGPVRNAAYAVMSIGADYASDNPFLFSFTVAAVVLFMLMLRS*
Ga0063356_10373260613300004463Arabidopsis Thaliana RhizosphereVLKRIQDLAATLAVLALLFGTIMAFNPRVHERFNEMTANVQGRESLGPVRNAAYAVLSIGADYASDNPFLFSFTVAAVVLFMLMLRS*
Ga0063356_10490364313300004463Arabidopsis Thaliana RhizosphereLAATLAMLVVLFGLLMAINPRMRERFGEMTMSVQGRDVNASFGPLGNAAYAAMSIGQDYAIDNPILFSFLVVAVVLFMMMLRT*
Ga0062594_10060726123300005093SoilVLKKVQDLAAALAVLAVLFGTLMVINPRVREQFSEMTTNVQGRESLGPVQNAAYAVMSIGADYASDNPFLFTFLVAAVVLFMLMVRS*
Ga0065712_1078430313300005290Miscanthus RhizosphereAARCKQGTALATSTEVVLKKVRDLAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAIDNPILFSFLVVAVVLFMLMLRT*
Ga0065715_1085406923300005293Miscanthus RhizosphereLAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAIDNPILFSFLVVAVVLFMLMLRT*
Ga0065707_1014546113300005295Switchgrass RhizosphereMALAKGIKVVWKKVRDLTATMAVLVVMFGMLMAINPRVRERFSELTMSVQGGRDVNSSISPVSNAAYAAVSIGTDYASGNPFLFSFLVVAVILFMLMLRS*
Ga0070677_1007465623300005333Miscanthus RhizosphereMYHLAAYCKQGTPLATSKEVVLKKVRDLAATLAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0070669_10091640523300005353Switchgrass RhizosphereAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0070674_10027677923300005356Miscanthus RhizosphereMYHLAAYCKQGTPLATSKEVVLKKVRDLAATLAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAHAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0070698_10171125323300005471Corn, Switchgrass And Miscanthus RhizosphereFAMLMAINPRVRERFAEMTAKVQGGDMDSSIGPAGNAAHAAMSIGSDYASDNPFLFAFLVVAVVLFMLMLRS*
Ga0066652_10105466323300006046SoilMRELSARIGCCVAQSGTRGPQRTQMGHLGAHCKQGTPLATSKEVVLKKVRDLAATLAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVGNPILFSFLVVAVVLFMMMLRT*
Ga0075367_1049267223300006178Populus EndosphereMMLLVTFMAINPRGRERFDEMMTTRVQGSDVRSSLGPISHAAHAAVAIGSDYAVDNPVLFSFLVVAAVLFMLMLRS*
Ga0075428_1000000171313300006844Populus RhizosphereVLVVLFGMLMTINPRVRERFVEMTTGVQGRDVNSSLGPLGNAAFAAVSIGQDYAIGNPVLFSFLVVAVVLFMMMLRT*
Ga0075421_10066442523300006845Populus RhizosphereVLKKVRDLAATLAVLVVLFGMLMTINPRVRERFVEMTTGVQGRDVNSSLGPLGNAAFAAVSIGQDYAIGNPVLFSFLVVAVVLFMMMLRT*
Ga0075430_10067492623300006846Populus RhizosphereMLVVLFGLLMAVNPRVRERFGEMTMSVQGRDVNASFGPLGNAAYAAMSIGQDYAVDNPILFSFLVVAVVLFM
Ga0079217_1000676323300006876Agricultural SoilVRQFGTRCPQHAYSCDLSPYCKQGTPLAISKEAVLKKIRDLAATLAVLAVLFGMIMAINPRVHERFAELTTSVQGRESLGPVQNAAYAAMSIGSDYAADNPFLFAFLVAAVVLFMLMLRS
Ga0079217_1006662423300006876Agricultural SoilMPLAMRREVVLKKVRDLAVTLAVLVVLFGMLMAINPRVREQFNEMTRTVQGRESLGPVQNAAYAAISIGSDYATDNPFLFSFLVAAVVLFILMLRS*
Ga0075429_10094254323300006880Populus RhizosphereVVASLRGVPQTGHDDCDNKDVVLKKVQDLAATLAVLALLFGTIMAFNPRVHERFNEMTANVQGRESLGPVRNAAYAVMSIGADYASDNPFLFTFTVAAVVLFMLMLRS*
Ga0079215_1077880713300006894Agricultural SoilLRDVIATLAVLAVLFAMLIAINPRVREHFGEMTASVQGRDMSSSIGTVSSAAHAATSIGSDYAAGNPFLFAFLVVAVVLFMMMLRS*
Ga0079216_1026207223300006918Agricultural SoilMRREVVLKKLRDLAVTLAVLVVLFGMLMAINPRVREQFNEMTRTVQGRESLGPVQNAAYAAVSIGSDYAADNPFLFSFLVAAVVLFMLMLRS*
Ga0079216_1179905223300006918Agricultural SoilVLFGMLMAINPRVREQFNEMTRTVQGRESLGPVQNAAYAAISIGSDYATDNPFLFSFLVAAVVLFILMLRS*
Ga0079216_1199630913300006918Agricultural SoilMLVVLFGMIMAINPRVRERFAELTSGVHGRESLGPMQNAAYAAMSIGSDYAGDNPYLFSFLVVAIVLFMLMLRS*
Ga0079218_1014089623300007004Agricultural SoilMRVITSFKACPGQGMPLAMYNKVVWKKLRDVAATLAVLAVLFAMLMALNPRVRERFAEMTASVQGRDMNSSVGPVSNAAYAAVSIGSDYASDNPFLFAFLVAAVVLFMLMLRS*
Ga0079218_1046644433300007004Agricultural SoilVYRGQGMVLAIQIKVVKKKARELGATLAVLAALFGMLMAINPQVRERFSEMTASMKSGEMNSSIGPVGNAAYAAMSIGSDYAADNPFLFSFLVVAVILFMLMLRN*
Ga0079218_1103147523300007004Agricultural SoilMPLAMRREVVLKKVRDLAVTLAVLVVLFGMLMAMNPRVREQFNETTRTVQGRESLEPVQNAAYAAISIGSDYATDNPFLFSFLVAAVVLFILMLRS*
Ga0079218_1107232813300007004Agricultural SoilVATLAVLAVMFAMIMALNPRVHDRFAELTTGVQGREPLGPLQKAAYAAVSIGSDYAAENPYLFSFLVVAALLFMLMLRS*
Ga0111539_100000023073300009094Populus RhizosphereVGRRVAQSGTRGPQRSQERHLAAYCKQGTPIATSKKVVLKKVRDLAATLAVLVVLFGMLMTINPRVRERFVEMTTGVQGRDVNSSLGPLGNAAFAAVSIGQDYAIGNPVLFSFLVVAVVLFMMMLRT*
Ga0114129_1072089623300009147Populus RhizosphereVLKKVQDLAATLAVLALLFGTIMAFNPRVHERFNEMTANVQGRESLGPVRNAAYAVMSIGADYASDNPFLFTFTVAAVVLFMLMLRS*
Ga0105347_100949923300009609SoilVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0126305_1001895323300010036Serpentine SoilVALCEWGTVLAMGTPLVWKKARDLGATLAVLAVLFGMLMAINPRVRERFGEMTANVQGGHVDSSLGPVSNAAYAAMSIGSDYASDNPFLFAFLVAAVVLFMLMLRN*
Ga0126304_1021520713300010037Serpentine SoilARDLGATLAVLAVLFGMLMAINPRVRERFGEMTANVQGGHVDSSLGPVSNAAYAAMSIGSDYASDNPFLFAFLVAAVVLFMLMLRN*
Ga0126312_1145726423300010041Serpentine SoilVLKRVRDLAATLAVLVLLFGMLLAINPRVRERFAEMTTNVQGGESLGPVQNAASAAVSIGSDYAADNPFLFWFVVAAVVLFMLMVR
Ga0126311_1034006923300010045Serpentine SoilMGITLVWKKARDLGATLAVLAVLFGMLMAINPRVRERFGEMTANVQGGHVDSSLGPVSNAASAAMSIGSDYASDNPFLFAFLVAAVVLFMLMLRN*
Ga0126306_1138615013300010166Serpentine SoilVWKKVRDLGATLTVLAVMFGMLMAINPRVRERFGEMTATVQGGGVDSSIAPMSSAASAAVAIGADYASDNPFLFAFCVAAVVLFMLMLRN*
Ga0137312_101329433300011400SoilVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAAYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0137325_101862213300011415SoilVLKKVRDLAATLAVLAVLFGMLLAINPRVREKFAGMMSTRGTDMNSSLGPVSNAAYAAMSIGSDYASDNPFLFSFLVVAIVLFMLMVRS*
Ga0137425_100923423300011422SoilVLKKVRELAATLAVRVVVVGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0075314_108689713300014265Natural And Restored WetlandsLAATLAVLVVLFGMLMAVNPRVRERFGEMTTSVQGRDMNSSLGPVSNAAHAAISIGSDYATDNPVLFSFLVVAALLLVLMLRS*
Ga0180090_108706513300014866SoilQRTQRHHLAEYCKQGTALATSTEAVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAALSIGQDYAVDNPILFSFLVVAVVLFMMMLRT*
Ga0180083_114582013300014875SoilATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAAYAAMSIGQDYAIDNPILFSFLVVAVVLFMLMLRT*
Ga0180079_103401913300015248SoilMVLAMCIKVVWKKVRDLTATLAVLAVMFGMLMAINPCVREKFAEMMSTRGRDVNSSIGPVSNAAYAAMSIGSDYASDNPFLFSFLVVAVVLFMLMVRS*
Ga0132257_10183348613300015373Arabidopsis RhizosphereMARSGTRNLQRTQAHHLAACWKQGTPIATSKEVVLKKVRDLAATLAVLVVLFGMLMTINPRVRERFVDMTTGVQGHDVNSSLGPLGNAAYAAVSIGQDYAVGNPVLFSFLVVAVVLFMMMLRT*
Ga0136617_1060628113300017789Polar Desert SandMSTKVVWRKVRDLGATLAVLAVLFGMLMAINPRVRERFGEMMSANVGRDMNSSLGPVGNAAYAAMSIGSDYAAGNPFLFSFLVVAVILFMLMFRS
Ga0184620_1016836513300018051Groundwater SedimentMQRRYLAACCKQGTALATGTEVVVKKARDLAATLAVLVVLFAMLAAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMML
Ga0184637_1043948223300018063Groundwater SedimentTPLASVKEVVLKKLRDLAATLAVLVVLFGMLMAINPRVRERFGEMTMMSVQGRDMNSSLGPLGNAAYAAMSIGSDYASDNPVLFSFLVVAVVLFMLMLRS
Ga0184611_100884113300018067Groundwater SedimentMQRRYLAACCKQGTALATGTEVVVKKARDLAATLAVLVVLFAMLAAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0184635_1004842813300018072Groundwater SedimentGTEVVVKKARDLAATLAVLVVLFAMLAAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0184627_1006445623300018079Groundwater SedimentVLKKLRDLAATLAVLVVLFGMLMAINPRVRERFGEMTMMSVQGRDMNSSLGPLGNAAYAAMSIGSDYASDNPVLFSFLVVAVVLFMLMLRS
Ga0184629_1045575913300018084Groundwater SedimentMAVLAVLFGMLMAINPRVRERFLESVQGGRDVNSSISPVSNAAYAAVSIGTDYAADNPFLFSFLVVAVILFMLMLRS
Ga0190265_1155872313300018422SoilMPLAMYNKVVWKRLRDLAVTLAVLAVLFAMLMAINPRVRERFAEMTASVQGRDMNSSVGPVSNAAYAAMSIGSDYALDNPFLFAFLVAAAVLFMLMLTSRW
Ga0190272_1004686013300018429SoilVTLAVLAVLFAMLMALNPRVRERFAEMTASVQGRDMNSSVGPVGNAAYAAVSIGSDYASDNPILFAFLVAAAVLFMLMLRS
Ga0190272_1065349713300018429SoilMAIAMDIKVVGKKARDLAATLAVLAVLFGILMAVNPRVREQFAAMTSRVQSRGSLGTVQNAAYAAVSIGSDYAADNPFLFAFLVAAVVLFMLMLRS
Ga0190272_1257128423300018429SoilMPLATCNKVVWKKVRELAATLAVLGVLFAMLMAINPRVRERFAEMTATVQGGDLNSSVGPVGNAAYAAVSIGSDYAGDNPFLFSFLVVAVVLFMLMLRN
Ga0190275_1005199933300018432SoilMPPTGQGIVLAMCRKVVWKKVRELAVTLAVLGVLFAMLMAINPRVREHFGEMTASVQGGDMNSSIGSVSNAAHAATSIGSDYAAGNPFLFAFLVVAIVLFMMMLRS
Ga0190275_1005970823300018432SoilMALAMDIKVVWKKARDLAATLAVLTVLFGILMAVNPRVREQFAAMTSTVQDGESLGPVQNAAYAAVSIGSDYAADNPYLFSLLVVAVVLFMLMLTMLRS
Ga0190270_1034327823300018469SoilPLAMYNKVVWKKLRDFAATLAVLAVLFAMLMALNPRVRERFAEMTASVQSRDLNSSVGPVGNAAYAAVSIGSDYASDNPFLAAFLVAAGVLFMLMLRNRW
Ga0190270_1097524813300018469SoilMSIKVVLKKVRDLAVTLAVLAVLFGLLLAINPRVREKFAGMMSTRGTEMNSSLGPVSNAAYAAMSIGSDYASDNPFLFSFLVVAIVLFMLMVRS
Ga0190270_1257894023300018469SoilAVLFAMLMAINPRVRERFAEMTVSVQGRDMNSSVGPVGNAAYAAMSIGSDYASDNPFLFAFLVAAAVLFMLMLRS
Ga0190270_1343274123300018469SoilVGTKVVWRKIRDLGATLAVLAVLFGILMAINPRVRERFSEMMTANVGRDMNSSLGPVGNAAYAAMSIGSDYASGNPFLFSFLVVAVILFMLMVRS
Ga0190264_1055182823300019377SoilMPLAMYNKVVWKRLRDLAVTLAVLAVLFAMLMAINPRVRERFAEMTSSVQGRDMNSSVGPVSNAAYAAMSIGSDYASDNPFLFAFLVAAVVLFMLMLTSRW
Ga0193738_103363843300020020SoilMRISVVLKKARELGVTLAVLAVLFGMLMAMNPRVRERFGEMTASVQSGDVNSSIGPVGNAAYAAMSIGSDYAADNPFLFSFLVVAVILFML
Ga0193738_107362713300020020SoilDTSAATRVIAPLMGCTGEGMVLAMCIKVVWKKVRDLTATLAVLAVLFGMLMAINPRVRDKFAEMMSTRGRDVNSSIGPVSNAAYAAMSIGSDYASDNPFLFGFLVVAVVLFMLMVRS
Ga0193736_100854313300021412SoilMSIKVVLKKVRDLAATLGVLAVLFGMLLAINPRVREKFAGMMSTRSTDVNSSLGPVSNAAYAAMSIGSDYASDNPFLFSFLVVAVVLFMLMVRS
Ga0209002_1053573313300025289SoilVWKKIRDLTATLAVLVVLFGMLMAINPRVRERFGEMTASVQGRDMNSSIGPVGNAAYAAMSIGSDYAADNPFLFSFLVVAVVLFMLMLRT
Ga0209341_1032551013300025325SoilVLATDQEVVWKKIRDLTATLAVLVVLFGMLMAINPRVRERFGEMTASVQGRDMNSSIGPVGNAAYAAMSIGSDYAADNPFLFSFLVVAVVLFMLMLRT
Ga0207659_1098381923300025926Miscanthus RhizosphereTLAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAHAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0207701_1018117733300025930Corn, Switchgrass And Miscanthus RhizosphereMCHLGAHCKQGTPLATSKEVVLKKVRDLAATLAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAHAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0207669_1024414123300025937Miscanthus RhizosphereMYHLAAYCKQGTPLATSKEVVLKKVRDLAATLAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAHAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0208185_107717513300027533SoilLCAPTGTHVPQSGTRAPQRTQRHHLAEYCKQGTALATSTEAVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0209818_100312953300027637Agricultural SoilVLKKIRDLAATLAVLAVLFGMIMAINPRVHERFAELTTSVQGRESLGPVQNAAYAAMSIGSDYAADNPFLFAFLVAAVVLFMLMLRS
Ga0209486_1014590513300027886Agricultural SoilNKVVWKKLRDVAATLAVLAVLFAMLMALNPRVRERFAEMTASVQGRDMNSPVGPVSNAAYAAVSIGSDYASDNPFLFAFLVAAVVLFMLMLRS
Ga0209486_1041146223300027886Agricultural SoilRDLAATLAMLVVLFGMIMAINPRVRERFAELTSGVHGRESLGPMQNAAYAAMSIGSDYAGDNPYLFSFLVVAIVLFMLMLRS
Ga0207428_100000043493300027907Populus RhizosphereVLVVLFGMLMTINPRVRERFVEMTTGVQGRDVNSSLGPLGNAAFAAVSIGQDYAIGNPVLFSFLVVAVVLFMMMLRT
Ga0247827_1108465313300028889SoilCKQGTALATSTEAVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0299906_1009529813300030606SoilVWKKTRDLAATLAVLAVLFGMLMAINPRVRERFAELTSSVQGRESLGPVQNAAYAAMSIGSDYAADNPFLFSFLVVAVVLFMLMLRT
Ga0268386_1069698413300030619SoilVWKKLRDLVATLAVLGVLFAMLMAINPRVRERFGDMTASVQGRDMNSSIGPVSNAAYAAMSIGSDYAADNPFLFAFLVVAVVLFMLMLRN
Ga0299914_1113667313300031228SoilRLRELFTRAGCRVRQSGTQGPQRAYSRHLVTCCEQGTPLAMGKKVVWKKARDLAATLTVLVVLFGMLMAINPRVRERFGEMTTSVQSRDMNSSLGPVSNAAYAAMSIGSDYAADNPFLFSFLVVAVILFMLMLRT
Ga0299913_1149547023300031229SoilMRIEVVLKKARDLAATLAVLVVLFGMLMAINPRVRDQFGQMTTSVQGRESLGPMQNAAYAAVSIGSDYAADNPFLFSFL
Ga0307408_10042328013300031548RhizosphereMLVVLFGLMVTINPRMRERFGEMTMSVQGRDVNASFGPLGNAAYAAMSIGQDYAVDNPILFAFLVVAVVLFMAMLRT
Ga0310892_1135272323300031858SoilTFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0307406_1038801323300031901RhizosphereVLKKVRDLAATLAMLVVLFGLMVTINPRMRERFGEMTMSVQGRDVNASFGPLGNAAYAAMSIGQDYAVDNPILFAFLVVAVVLFMAMLRT
Ga0310900_1004699023300031908SoilVLKKVQDLAAALAVLAVLFGTLMVINPRVREQFSEMTTNVQGRESVGPVQNAAYAVMSIGADYASDNPFLFTFLVAAVVLFMLMVRS
Ga0310900_1089512313300031908SoilKKARDLAATLAVLVVLFAMLAAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0310885_1027173313300031943SoilTALATSTEAVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVNSSLGPLGNAAYAAVSIGQDYAIDNPILFSFLVVAVVLFMMMLRT
Ga0310884_1086989623300031944SoilVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0307409_10087483023300031995RhizosphereDLAATLAMLVVLFGLMVTINPRMRERFGEMTMSVQGRDVNASFGPLGNAAYAAMSIGQDYAVDNPILFAFLVVAVVLFMAMLRT
Ga0310899_1040738113300032017SoilGTALATSTEAVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0315912_1053699713300032157SoilLRGWGTALAMGITVVWKKARDLGATLAVLAVLFGMLMAINPRVRERFGEMTANVQGGHVDSSLGPVSNAAYAAMSIGSDYASDNPFLFAFLVAAVVLFMLMLRN
Ga0214472_1105141413300033407SoilMRIEVVWKKARDLTATLGVLVVLFGMLMAINPRVRERFGEMTASVQGRDMNSSLGPVGNAAYAAISIGSDYAADNPFLFSFLVVAVVLFMLMLRT
Ga0364925_0055201_927_11753300034147SedimentLAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAVYAAMSIGQDYAVDNPILFSFLVVAVVLFMMMLRT
Ga0364925_0121821_618_8873300034147SedimentVLKKVRELAATFAVLVVLFGMLMAINPRVRERFGEMTTSVQGRDVSSLGPLGNAAYAAVSIGQDYAVDNPILFSFLVVAVVLFMMMLRT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.