Basic Information | |
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Family ID | F099536 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 58 residues |
Representative Sequence | ADFSVVLFRPNFMLASEEYPMKAHKNQWLLTMPSPPAIPGGGTNQGTHHGVWCADAFAVT |
Number of Associated Samples | 77 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.97 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.15 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.359 % of family members) |
Environment Ontology (ENVO) | Unclassified (26.214 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (54.369 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.15 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF02371 | Transposase_20 | 11.65 |
PF00582 | Usp | 1.94 |
PF13610 | DDE_Tnp_IS240 | 1.94 |
PF14104 | DUF4277 | 1.94 |
PF01609 | DDE_Tnp_1 | 1.94 |
PF12762 | DDE_Tnp_IS1595 | 1.94 |
PF11695 | DUF3291 | 0.97 |
PF13524 | Glyco_trans_1_2 | 0.97 |
PF07730 | HisKA_3 | 0.97 |
PF13649 | Methyltransf_25 | 0.97 |
PF01610 | DDE_Tnp_ISL3 | 0.97 |
PF13546 | DDE_5 | 0.97 |
PF00239 | Resolvase | 0.97 |
PF00589 | Phage_integrase | 0.97 |
PF13401 | AAA_22 | 0.97 |
PF08388 | GIIM | 0.97 |
PF15738 | YafQ_toxin | 0.97 |
PF00535 | Glycos_transf_2 | 0.97 |
PF13793 | Pribosyltran_N | 0.97 |
PF02441 | Flavoprotein | 0.97 |
PF08003 | Methyltransf_9 | 0.97 |
PF13646 | HEAT_2 | 0.97 |
PF13298 | LigD_N | 0.97 |
PF14706 | Tnp_DNA_bind | 0.97 |
PF00923 | TAL_FSA | 0.97 |
PF00496 | SBP_bac_5 | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG3547 | Transposase | Mobilome: prophages, transposons [X] | 11.65 |
COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 1.94 |
COG3293 | Transposase | Mobilome: prophages, transposons [X] | 1.94 |
COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 1.94 |
COG5421 | Transposase | Mobilome: prophages, transposons [X] | 1.94 |
COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 1.94 |
COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 1.94 |
COG0176 | Transaldolase/fructose-6-phosphate aldolase | Carbohydrate transport and metabolism [G] | 0.97 |
COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 0.97 |
COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 0.97 |
COG3464 | Transposase | Mobilome: prophages, transposons [X] | 0.97 |
COG3850 | Signal transduction histidine kinase NarQ, nitrate/nitrite-specific | Signal transduction mechanisms [T] | 0.97 |
COG3851 | Signal transduction histidine kinase UhpB, glucose-6-phosphate specific | Signal transduction mechanisms [T] | 0.97 |
COG4564 | Signal transduction histidine kinase | Signal transduction mechanisms [T] | 0.97 |
COG4585 | Signal transduction histidine kinase ComP | Signal transduction mechanisms [T] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 100.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300006049|Ga0075417_10232078 | Not Available | 881 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 21.36% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 8.74% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 6.80% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 6.80% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.83% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 4.85% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 4.85% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.88% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 3.88% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 3.88% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.91% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 2.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.94% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.94% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.97% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.97% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.97% |
Soil | Environmental → Terrestrial → Soil → Sand → Desert → Soil | 0.97% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.97% |
Agave | Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave | 0.97% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000041 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere | Host-Associated | Open in IMG/M |
3300000443 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly | Environmental | Open in IMG/M |
3300000652 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA | Host-Associated | Open in IMG/M |
3300000709 | Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance | Environmental | Open in IMG/M |
3300000754 | Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TB | Environmental | Open in IMG/M |
3300000858 | Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil | Environmental | Open in IMG/M |
3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300002899 | Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607) | Environmental | Open in IMG/M |
3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Host-Associated | Open in IMG/M |
3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300005166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 | Environmental | Open in IMG/M |
3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
3300005187 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 | Environmental | Open in IMG/M |
3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005562 | Agave microbial communities from Guanajuato, Mexico - As.Ma.e | Host-Associated | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005874 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 | Environmental | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Host-Associated | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006194 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 | Host-Associated | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
3300007790 | Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012478 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610 | Host-Associated | Open in IMG/M |
3300012484 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510 | Environmental | Open in IMG/M |
3300012497 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 | Host-Associated | Open in IMG/M |
3300012891 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2 | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026295 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026310 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028589 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1 | Environmental | Open in IMG/M |
3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300034671 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
ARcpr5oldR_0022383 | 3300000041 | Arabidopsis Rhizosphere | MGDFSVVLFRSDFVLAFEEHPVKVHKNQWLLILPSPPDLHRGAIHQGTYHG |
F12B_100804131 | 3300000443 | Soil | HFMLASEEYPMKVHKNQWLSAPLSSPDLPCGATNQGTHPGVWDAAAFPVT* |
ARCol0yngRDRAFT_10057531 | 3300000652 | Arabidopsis Rhizosphere | NFMLASEGYLVKVHKNQRLLTLPSPPNLPCGATNQGTYHGVWWADAFAVT* |
KanNP_Total_F14TBDRAFT_10253881 | 3300000709 | Soil | MLVSEEDLMKVHKNQWLLSLLFPPDIPCGATNQGTHPGVWDADAFPVT* |
JGI11851J11668_10001391 | 3300000754 | Soil | MGDFSVVLFRPHFMLASEGCPMKVHKNQWLSAILSSPDLPCGATNQGTHPGVWDADAFPVT* |
JGI11851J11668_10001411 | 3300000754 | Soil | NVEIFYLPADFSVVLFRPNFMLASEEHPMKVHKNQRLLTIPSPPDIPCGATNQGTHHGVWGADTFAVT* |
JGI10213J12805_101248522 | 3300000858 | Soil | MKEHKNQWLLTMPSPPAIPGGGTNQGTHHGVWRADA |
JGI1027J12803_1051797091 | 3300000955 | Soil | EGYPMKVHKNQRLLTLLSPPILPCGATNQGTYHGVWWTDALTVT* |
JGIcombinedJ43975_100188203 | 3300002899 | Soil | MLASEGYPMKVHKNQRLLTLPSLPNLPRGATNQGTYHGVWWTDAFAVT* |
JGI25406J46586_102346771 | 3300003203 | Tabebuia Heterophylla Rhizosphere | SVVLFRPNFMLVSEENPMKAHKNQWLLTMPSPPAIPCGGTNQGTHHGVGRADAFAVT* |
Ga0063455_1016482731 | 3300004153 | Soil | DFSVVLFRPHCMLASEGYLMKVHKNQRLLTLPSPPNLPCGATNQGTYHDVWWTDAFAVT* |
Ga0062590_1024088472 | 3300004157 | Soil | MGDFSVVLFRPNFMLASEGYPMKVHKNQRLLNLPSPPNLPCGATNQGTYHG |
Ga0066674_105499212 | 3300005166 | Soil | MGDFSVVLFRPNFMLFSEKNRVKVHTDQGLLTTPSPPALPCGATNQGTHHGVWGADTFA |
Ga0066683_106564751 | 3300005172 | Soil | TDFSVVLFRPNFMLVSEVHSMKVHKNQWLLTLPSPFDFPRGATNQGTPHGIWGADAFAVT |
Ga0066675_105199941 | 3300005187 | Soil | TDFSVVLFRPNFMLASEGYLIKVHTNQRLLTLPSPPNLPCGATHQGTYHGVWWTDAFAVT |
Ga0065704_103577992 | 3300005289 | Switchgrass Rhizosphere | LPLDRSLLMGDFSVVLFRPNFMLASEEHPMKVHKNQRLLTIPSSPDIPCGATNQGTHHGVWGADTFAVT* |
Ga0065704_103694492 | 3300005289 | Switchgrass Rhizosphere | MRKSWIELTDFSVVLFRPNFMLASEEYPMKAHKNQWLLTMLYPPAIPCGGANQGTHHGVWRADAFAVT* |
Ga0065705_100863602 | 3300005294 | Switchgrass Rhizosphere | MLVSEEYLMKAHKNQWLLNLLFPPDIPWGATNQGTHPRVWGADAIAVA* |
Ga0065705_101121022 | 3300005294 | Switchgrass Rhizosphere | MLASEGHCMKAHKNQWLLTMPSPPAIPCEGANQGIHHGVWGADAFAVA* |
Ga0065705_101649403 | 3300005294 | Switchgrass Rhizosphere | MLTSEEHPMKVNKNQWLLTIPSPPDTLCGATNQGTRHGVWGAVAFAVT* |
Ga0065707_101071931 | 3300005295 | Switchgrass Rhizosphere | MLVSEESSMKAHKNQWFLNLLSPPDFPCGVTNWGTHYGVWGAEAFAVT* |
Ga0065707_108558592 | 3300005295 | Switchgrass Rhizosphere | DFSVVLFRPNFMLASEEHLMKVHKNQWLSTMPSHPDLPYGATNQGLHHGVRGADAFAVT* |
Ga0066388_1013204391 | 3300005332 | Tropical Forest Soil | DFSVVLFRPNFMLASEEYPMKAHKYQWLLTMPSPPAIPGGGTNQGTHHGVWLANAFAVT* |
Ga0066388_1062834761 | 3300005332 | Tropical Forest Soil | MIRKKTVYHWMSFPDFSVVLFRPNFMLASEWYLVKVHKNQRLLTLPSPPNLPCGATNQGTYHGVWWADAFA |
Ga0066388_1078647192 | 3300005332 | Tropical Forest Soil | MLVSEEYPMKVHKNQWILTMPSPPAIPGGGTNQGTHHGVWCADAFA |
Ga0068869_1006126191 | 3300005334 | Miscanthus Rhizosphere | LMGDFSVVLFRPNFMLSSEGYPMKVHKNQRLLILPSPPNLPCGATNQGAHHDVWVQTPSQ |
Ga0068868_1009475242 | 3300005338 | Miscanthus Rhizosphere | VGEPPSTEIGVPNIPDFSVVLFRPNFMLASEEYPMKAHKNQWLLTMSSPPAIPGGGTNQRTHHGVWRADAFAVT* |
Ga0070700_1004382072 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MLASEEYPMKAHKNQWLLTMSSPPAIPGGGTNQRTHHGVWRADAFAVT* |
Ga0058697_103436321 | 3300005562 | Agave | PPDFSVMLIRPNFMLASEGYLVKVHTNQRLLTLPSPPNLPCGATNQGTYHGVWWADAFAVT* |
Ga0066708_106122531 | 3300005576 | Soil | TDFSVVLFRPNFMLASEGYPMKVHKNQWLSTLLSPPNLPCGATNQGTYHGVWGQMPSQ* |
Ga0066654_105391541 | 3300005587 | Soil | MLASEGYLVKAHKNQRLLTLPSPPNLPCGATNQGTYHGVWW |
Ga0068861_1019307721 | 3300005719 | Switchgrass Rhizosphere | DFSVVLFRPNFMLASEGYPMKVHKNQRLLNLPSPPNLPCGATNQGTYHGVWWADAFAVI* |
Ga0066903_1022571502 | 3300005764 | Tropical Forest Soil | HMKVPKNQWVWAMLSPPNLPGGGTNQGTHPGVWGADAYAVT* |
Ga0066903_1025235661 | 3300005764 | Tropical Forest Soil | MGDFSVVLFRPNFMLASEEYPMKAHKYQWLLTMPSPPAIPGGGTNQGTHHGVWLANAFAVT* |
Ga0066903_1031732671 | 3300005764 | Tropical Forest Soil | DFSVVLFRPNFMLVSEEYPMKAHKNQWFLTPPSPPDLPWGATNQGTHHGVWRADAFAGT* |
Ga0066903_1059633571 | 3300005764 | Tropical Forest Soil | DFSVVLFRPHFMLVSEEYPMKVHKNQWLLTMPSPPAIPGGGTNQGTHHGVWCADAFAVT* |
Ga0075288_10620712 | 3300005874 | Rice Paddy Soil | TDFSVVLFRPNFMLASEEYPMKAHKNQWLLTMLSPPAIPCGGANQGTHHGVWRADAFAVT |
Ga0081455_1000733214 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MGDFSVVPFRLNFMLFSEKNHVKALKNQWVLTTSSPPAIPCGGTNPGTHHVSVDTSVYER |
Ga0081455_108493742 | 3300005937 | Tabebuia Heterophylla Rhizosphere | GSLIADFSVVLFRPNFMLASEGYLVKVHKNQRLLTLPSPPNLPCGATNQGTYHGVWWADA |
Ga0081539_102129051 | 3300005985 | Tabebuia Heterophylla Rhizosphere | KPSDFSVVLFRPNFMLASEEYPMKAHKNQWLLTVLSPPAIPCGGTNQGTHHGVWRADTFAVT* |
Ga0066656_110832362 | 3300006034 | Soil | PDFSVVLFRPNFMLASEEHPMKTHKNQWLSTMPSPPAILWGATNQGTHHGVWGADAFAVT |
Ga0075417_100546563 | 3300006049 | Populus Rhizosphere | MGDFSVVLLQSDFMLASEEHPMKVHKNQWLSNLLSPPDVPRGATNQGTHPRGWGAGACAVT* |
Ga0075417_102320781 | 3300006049 | Populus Rhizosphere | MLVSEEYLMKVHKYQWLLNLLFPPDIPCGATNQGRHHGVWGADAIAVA* |
Ga0075417_104048492 | 3300006049 | Populus Rhizosphere | ADFSVVLFRPNFMLASEEYPMKAHKNQWLLTMPSPPAIPGGGTNQGTHHGVWCADAFAVT |
Ga0075427_100026203 | 3300006194 | Populus Rhizosphere | MSKVVVGLSTDFSVVLFRSDFVLVSEEHLMKMHKNQWLLTFCLPPDISWRAMNQGTHHG |
Ga0075427_100093553 | 3300006194 | Populus Rhizosphere | MGDFSVVLLQSDFMLASEEHPMKVHKNQWLSNLLSPPDIPRGATNQGTHPRGWGAGACAVT* |
Ga0066659_118881911 | 3300006797 | Soil | FRQQLLLASGVSRFPDFSVVLFRPNFMLASEGYPMKVHKNQWLSTLLSPPNLPCGATNQGTYHGVCGTDAFAVT* |
Ga0075428_1004577061 | 3300006844 | Populus Rhizosphere | MLASEGYLVKVHKNQRLLTLLSPPNLPCGATNQGTYHGVWWTDALT |
Ga0075428_1005686092 | 3300006844 | Populus Rhizosphere | MLASEGYPMKVHKNQRLLTLPSPPNLPRGATNQGTYYGVWWTDAFAVT* |
Ga0075428_1018157581 | 3300006844 | Populus Rhizosphere | DFSVVLFRPNFMLASEEHLMKVHKNQWFLTMPSSPDLPYGATNQGLHHGVRGADAFAVT* |
Ga0075421_1002670753 | 3300006845 | Populus Rhizosphere | MLASEEYPMKVHKNQWLPTLLSSPDLPCGATNQGTHPGVRDADAFPVT* |
Ga0075421_1002816902 | 3300006845 | Populus Rhizosphere | MVENCTDFSVVLFRPNFTLVSEGNPVKTHKNQRLLNPLCPLDISWGAMNQGTHDGIWGAGTFAVT* |
Ga0075421_1009302613 | 3300006845 | Populus Rhizosphere | MGDFSVVLFRPNCMLASEKHPMKVHKNQCVLTNSFPPDTPCGATNQGTQHGVWGANAFAVT* |
Ga0075430_1015323122 | 3300006846 | Populus Rhizosphere | MLASEEYPMKAHKNQWLLTMPSPPAIPGGGTNQGTHHGVWCADAFAVT* |
Ga0075431_1002909963 | 3300006847 | Populus Rhizosphere | MLVSEEYPMKAHKNQWLLIMPSPPAIPGGGTNQGTHHGVWRADAFAVTEMRQSTAM |
Ga0075433_109199812 | 3300006852 | Populus Rhizosphere | MFTPDFSVVLFRLDFMLASEEDPMKAHKNQWLLTMPSPPAIPCGAMNQGTHHGVWRADAFAVT* |
Ga0075425_1002366762 | 3300006854 | Populus Rhizosphere | MGDFSVVLFRSDCMLMSEEHPMKAHKNQWLLILPSPPDLPWGAIHQGTYHRVWGADAFAVT* |
Ga0075434_1020470411 | 3300006871 | Populus Rhizosphere | DFSVVLFRPNFMLASEEHLMKVHKNQWLLTMPSSPDLPYGATNQGLHHGVRGADAFAVT* |
Ga0075434_1022805191 | 3300006871 | Populus Rhizosphere | MKVHKNQWFLTLPSPPDIPYEAMNQGTHHGVWGAD |
Ga0075419_100903971 | 3300006969 | Populus Rhizosphere | MKAHKNQWLLTMPSPPAIPCGGTNQGTHHGVRRADTLAAT* |
Ga0075419_105301593 | 3300006969 | Populus Rhizosphere | SVVLFRSNFMLVSEEYPMKAHKNQWLLIMPSPPAIPGGGTNQGTHHGVWRADAFAVT* |
Ga0075419_113657051 | 3300006969 | Populus Rhizosphere | MAALPGNSAYEADFSVVLFRPDYMLASEEYPMKVHKNQWLPTLLSSPDLPCGATNQGTHPGVRDADAFPVT* |
Ga0099793_105544441 | 3300007258 | Vadose Zone Soil | PDFSVVLFRPNFMLTSEEHPMKAHKNQGLLTTPSPPVIPCGATNQGTHHGVWGADAFAVT |
Ga0105679_107752012 | 3300007790 | Soil | MGDFSVVPFRSDFVLVSEGNPVKTHKNQWLLNPLSPLDIPCEATNQGTYPRVGGADA |
Ga0099830_108691561 | 3300009088 | Vadose Zone Soil | SHQKFTESQDNTHGTDFSVVLFRPNFMLTSEEHPMKAHKNQGLLTTPSPPVIPCGATNQGTHHGVWGADAFAVT* |
Ga0105245_126120842 | 3300009098 | Miscanthus Rhizosphere | MKAHKNQWLLTMLSPPAIPCGGANQGTHHGVWRADAFAVT |
Ga0075418_125161231 | 3300009100 | Populus Rhizosphere | SLLMGDFSVVLFRPNFMLASEEHPMKVHKKSTALNLLSPPDILWGATNQGTHHGVWGADTFAVT* |
Ga0105249_114400311 | 3300009553 | Switchgrass Rhizosphere | LMGDFSVVLFRPNFMLASEGYPMKVHKNQRLLNLPSPPNLPCGATNQGTYHGVWWADAFAVI* |
Ga0126315_111859291 | 3300010038 | Serpentine Soil | ADFSVVLFRSDFLLVSKKNRMKMHRNQWVLDPLSPPDLPWGAMNQGTHHGVWGADTFAVT |
Ga0126312_102874861 | 3300010041 | Serpentine Soil | MLGSEEHPMKTHKNQRVLNPLFPPDSPWRVLNQGTHHGVWGADAFAVTQHGTTLSDV |
Ga0126312_104285332 | 3300010041 | Serpentine Soil | MLGSEEHPMKTHKNQRALNPLFPPDSPWRVLNQGTHHGVWGADAFAVTQHGTTLSDV |
Ga0126314_105681671 | 3300010042 | Serpentine Soil | PDFSVVLFRPNFMLASEEHLMKVHKNQWLLTMPSPPDFPYGATNQGLHHGVRGADAFAVT |
Ga0126380_107229982 | 3300010043 | Tropical Forest Soil | SEKNRMKVHKNQWLLNLLLPPDIPCGATKQGIHYDVWGTDAIAVA* |
Ga0126380_119640921 | 3300010043 | Tropical Forest Soil | NFMLASEEYPMKAHKNQWLLTMLSPPAIPCGGTNQGTHHGVWRVDTFAVT* |
Ga0126384_113004371 | 3300010046 | Tropical Forest Soil | LGVSADQLPDFSVVLFRPHFMLASEGYLMKVHKNQRLLILPSPPNLPGGATNQGTYHGVW |
Ga0126384_114380911 | 3300010046 | Tropical Forest Soil | MGDFSVVLFRPNFMLTSEKNPMKVLKNQWIPTLSSSHDLPCSATNQGTPHSGWGADAFV* |
Ga0126370_108889241 | 3300010358 | Tropical Forest Soil | MRAAKVSDFSVVLFRPNFMLASEEYPMKAHKNQWLLTMLSPPAIPCGGANQGTHHGVWRADAFAVT* |
Ga0126376_113859451 | 3300010359 | Tropical Forest Soil | DRERGHYWAVYLDPDFSVVLFRPDFMLASEGYPMKVHKNQRLLTLPSPLNLPCGATNQGAYHDVWWADAFAVT* |
Ga0137377_118377342 | 3300012211 | Vadose Zone Soil | SVVLFRPNFILVSEVHSMKVHKNQWLLTLPSPFDFPRGATNQGTPHGIWGADAFAVT* |
Ga0150985_1192452281 | 3300012212 | Avena Fatua Rhizosphere | AADFSVVLFRPNFMLASEEHPMKVHKNQRFLTLPSPPDIPWGATNQGTHHCVWGADAFAVT* |
Ga0150985_1230556971 | 3300012212 | Avena Fatua Rhizosphere | VSFLTSFLVQSQKYPMKARKNQWLSNLLSPPDIPCGATNQGTHHGVWGADAFAVT* |
Ga0157328_10001871 | 3300012478 | Arabidopsis Rhizosphere | MGDFSVVLFRSDFVLAFEEHPVKVHKNQWLLILPSPPDLHRGAIHQGTYHGVWGADAFAVT* |
Ga0157333_10216881 | 3300012484 | Soil | MGDFSVVLFRPNFMLASEDHLMKVHKNQWLSTMPSPPALPYGATNQGLHHGVRGADAFAGT* |
Ga0157319_10264921 | 3300012497 | Arabidopsis Rhizosphere | MGDFSVVLFRSDFVVASKEHPVKVHKNQWLLILPSPPDLHRGAIHQGTYHGVWGADAF |
Ga0157305_100220312 | 3300012891 | Soil | MGDFSVVLFRPNFMLASEGYPMKVHKNQRLLNLPSPPNLPCGATNQGTYHGVWWADAFAVI* |
Ga0137419_116364712 | 3300012925 | Vadose Zone Soil | DFSVVLFRPNFMLTSEEHPMKAHKNQGLLTTPSPPVLPCGATNQGTHHGVWGADAFAVT* |
Ga0137410_116726421 | 3300012944 | Vadose Zone Soil | MVFLSQGRNDSDFSVVLFRPNFMLTSEEHPMKAHKNQGLLTTPSPPVIPCGATNQGTHHGVWGADAFAVT* |
Ga0126369_132731781 | 3300012971 | Tropical Forest Soil | SVAVGLMGDFSVVLFRPHFMLASEEYPMKVHKNQWLLTMPSPPAIPGGGTNQGTHHGVWCADAFAVT* |
Ga0157375_103165291 | 3300013308 | Miscanthus Rhizosphere | MGDFSVVLFRPNFMLAFEEYPMKAHKNQWLLTMPSPPAIPCGGTNQGTHH |
Ga0157379_100515361 | 3300014968 | Switchgrass Rhizosphere | MEAAQRFVSTQYTDFSVVLFRPNFMLSSEGYPMKVHKNQRLLILPSPHNLPCGATNQGAHHDVWVQTPSQ* |
Ga0137409_102612813 | 3300015245 | Vadose Zone Soil | MGDFSVVLFRPNFMLTSEEHPMKAHKNQGLLTTPSPPVIPCGATNQGTHHGVWGADAFAVT* |
Ga0207669_103537861 | 3300025937 | Miscanthus Rhizosphere | YVQASDFSVVLFRPNFMLASEEYPMKAHKNQWLLTMSSPPAIPGGGTNQRTHHGVWRADAFAVT |
Ga0207712_117279412 | 3300025961 | Switchgrass Rhizosphere | PDFSVVLFRPNFMLASEEYPMKAHKNQWLLTMLSPPAIPCGGANQGTHHGVWRADAFAVT |
Ga0209234_10275612 | 3300026295 | Grasslands Soil | MGDFSVVLFRPNFMLVSEVHSMKVHKNQWLLTLPSPFDFPRGATNQGTPHGIWGADAFAV |
Ga0209239_10410402 | 3300026310 | Grasslands Soil | LFETDISCEFSRENETDFSVVLFRPNFMLVSEVHSMKVHKNQWLLTLPSPFDFPRGATNQGTPHGIWGADAFAVT |
Ga0209239_13756901 | 3300026310 | Grasslands Soil | LLLDRVIQTDFSVVLFRPNFMLASEGYPMKVHKNQWLSTLLSPPNLPCGATNQGTYHGVWGTDAFAVT |
Ga0209382_102748771 | 3300027909 | Populus Rhizosphere | MGDFSVVLLQSDFMLASEEHPMKVHKNQWLSNLLSPPDIPRGATNQGTHPRGWGAGACAV |
Ga0247818_112043381 | 3300028589 | Soil | VDNPDFSVVLFRPNLMLASDTYLMKAHKNQWLSNLLSLPDILRGATHQGTHHGIWGADAFAVT |
Ga0307504_102128821 | 3300028792 | Soil | NFMLTSEEHPMKAHKNQGLLTTPSPPVIPCGATNQGTHHGVWGADAFAVT |
Ga0307302_104907121 | 3300028814 | Soil | MGDFSVVLFRPNFMLASEEHLMKVHKNQWLSTIPSPPDLPYGATNQGLHHGVRGADAFAV |
Ga0306917_110117191 | 3300031719 | Soil | MQRLILPDFFVVLFRPNFMLVSEGYLMKMHKNQWVLNTLFPPDIPWGAIHQGTPHGVWSADTFAVT |
Ga0310900_100700002 | 3300031908 | Soil | MGDFSVVLFRPNFMLASEGYPMKAHKNQRLLTLPSPPNLPCGATNQGTYHGVWWADAFAV |
Ga0314796_098620_103_288 | 3300034671 | Soil | MGDFSVVLFRPNFMLASEGYPMKAHKNQRLLTLPSPPNLPCGATNQGTCHGVWWADAFAV |
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