Metagenome Family F099529

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099529
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	50 residues
Representative Sequence	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL
Number of Associated Samples	79
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.50 %
% of genes near scaffold ends (potentially truncated)	27.18 %
% of genes from short scaffolds (< 2000 bps)	83.50 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.340 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.592 % of family members)
Environment Ontology (ENVO)	Unclassified (42.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.835 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04002	RadC	13.59
PF01934	HepT-like	3.88
PF13470	PIN_3	2.91
PF13155	Toprim_2	2.91
PF12323	HTH_OrfB_IS605	1.94
PF01541	GIY-YIG	0.97
PF10431	ClpB_D2-small	0.97
PF04014	MazE_antitoxin	0.97
PF00499	Oxidored_q3	0.97
PF00199	Catalase	0.97
PF02661	Fic	0.97
PF11848	DUF3368	0.97
PF01850	PIN	0.97
PF04542	Sigma70_r2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	13.59
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	3.88
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	3.88
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.97
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.97
COG0839	NADH:ubiquinone oxidoreductase subunit 6 (chain J)	Energy production and conversion [C]	0.97
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.97
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.97
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
All Organisms	root	All Organisms	44.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
cellular organisms	root	All Organisms → cellular organisms	44.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	36.89 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.97 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.97 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	16.50 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.97 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	0.97 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	12.62 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	3.88 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.97 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.97 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	12.62 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2.91 %
Candidatus Scalinduaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae	0.97 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.97 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	12.62 %
Candidatus Denitrolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Candidatus Denitrolinea	0.97 %
Candidatus Scalindua	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua	0.97 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.97 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	12.62 %
Candidatus Denitrolinea symbiosum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Candidatus Denitrolinea → Candidatus Denitrolinea symbiosum	0.97 %
Candidatus Scalindua rubra	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	0.97 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.97 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_103478511	Not Available	585	Open in IMG/M
3300001213\|JGIcombinedJ13530_107587979	Not Available	521	Open in IMG/M
3300001213\|JGIcombinedJ13530_109100867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2417	Open in IMG/M
3300003432\|JGI20214J51088_10303141	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300003541\|JGI20214J51650_10710077	Not Available	704	Open in IMG/M
3300003999\|Ga0055469_10100976	Not Available	830	Open in IMG/M
3300004067\|Ga0055485_10187782	Not Available	582	Open in IMG/M
3300005093\|Ga0062594_102434032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	573	Open in IMG/M
3300005289\|Ga0065704_10027976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1788	Open in IMG/M
3300005289\|Ga0065704_10158462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1373	Open in IMG/M
3300005289\|Ga0065704_10170911	Not Available	1292	Open in IMG/M
3300005289\|Ga0065704_10693041	Not Available	564	Open in IMG/M
3300005294\|Ga0065705_10156454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1860	Open in IMG/M
3300005294\|Ga0065705_10719591	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005295\|Ga0065707_10048071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	845	Open in IMG/M
3300005471\|Ga0070698_100225564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1807	Open in IMG/M
3300005471\|Ga0070698_101124557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	734	Open in IMG/M
3300005985\|Ga0081539_10055824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2195	Open in IMG/M
3300006194\|Ga0075427_10111171	Not Available	516	Open in IMG/M
3300006845\|Ga0075421_100221763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2330	Open in IMG/M
3300006846\|Ga0075430_100826016	Not Available	764	Open in IMG/M
3300006847\|Ga0075431_101661945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	596	Open in IMG/M
3300006871\|Ga0075434_101539366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	674	Open in IMG/M
3300006904\|Ga0075424_102628372	Not Available	526	Open in IMG/M
3300006969\|Ga0075419_10412530	Not Available	927	Open in IMG/M
3300007614\|Ga0102946_1381027	Not Available	534	Open in IMG/M
3300009081\|Ga0105098_10833416	Not Available	500	Open in IMG/M
3300009146\|Ga0105091_10103544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1306	Open in IMG/M
3300009147\|Ga0114129_10266158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2295	Open in IMG/M
3300009147\|Ga0114129_11528033	Not Available	819	Open in IMG/M
3300009147\|Ga0114129_11846628	Not Available	734	Open in IMG/M
3300009153\|Ga0105094_10857614	Not Available	535	Open in IMG/M
3300009157\|Ga0105092_10520605	Not Available	683	Open in IMG/M
3300009162\|Ga0075423_11596154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	701	Open in IMG/M
3300009166\|Ga0105100_10122030	Not Available	1539	Open in IMG/M
3300009166\|Ga0105100_10912958	Not Available	548	Open in IMG/M
3300009168\|Ga0105104_10506352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	680	Open in IMG/M
3300009168\|Ga0105104_10744841	Not Available	566	Open in IMG/M
3300009168\|Ga0105104_10781064	Not Available	554	Open in IMG/M
3300009171\|Ga0105101_10029128	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	2678	Open in IMG/M
3300009179\|Ga0115028_10578630	Not Available	834	Open in IMG/M
3300009553\|Ga0105249_11915452	Not Available	665	Open in IMG/M
3300009804\|Ga0105063_1080493	Not Available	519	Open in IMG/M
3300010040\|Ga0126308_11202522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	536	Open in IMG/M
3300010041\|Ga0126312_10306752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1121	Open in IMG/M
3300010041\|Ga0126312_11026572	Not Available	604	Open in IMG/M
3300011003\|Ga0138514_100043923	Not Available	886	Open in IMG/M
3300011413\|Ga0137333_1000311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	13214	Open in IMG/M
3300011436\|Ga0137458_1086617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	885	Open in IMG/M
3300011445\|Ga0137427_10467222	Not Available	520	Open in IMG/M
3300012161\|Ga0137336_1023712	Not Available	1091	Open in IMG/M
3300012164\|Ga0137352_1004404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2331	Open in IMG/M
3300012201\|Ga0137365_10147962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1765	Open in IMG/M
3300012201\|Ga0137365_10920636	Not Available	637	Open in IMG/M
3300012228\|Ga0137459_1015911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2093	Open in IMG/M
3300012350\|Ga0137372_10063351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	3212	Open in IMG/M
3300012350\|Ga0137372_10617729	Not Available	793	Open in IMG/M
3300012353\|Ga0137367_10216115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1385	Open in IMG/M
3300012353\|Ga0137367_10336447	Not Available	1076	Open in IMG/M
3300012353\|Ga0137367_10589059	Not Available	779	Open in IMG/M
3300012354\|Ga0137366_10118151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2003	Open in IMG/M
3300012354\|Ga0137366_10320689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1138	Open in IMG/M
3300012355\|Ga0137369_10118542	Not Available	2144	Open in IMG/M
3300012356\|Ga0137371_10785501	Not Available	726	Open in IMG/M
3300012358\|Ga0137368_10224708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1316	Open in IMG/M
3300012358\|Ga0137368_10796066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	585	Open in IMG/M
3300012532\|Ga0137373_10582751	Not Available	845	Open in IMG/M
3300012676\|Ga0137341_1035924	Not Available	821	Open in IMG/M
3300013760\|Ga0120188_1048364	Not Available	541	Open in IMG/M
3300014255\|Ga0075320_1025021	Not Available	988	Open in IMG/M
3300014270\|Ga0075325_1201585	Not Available	531	Open in IMG/M
3300014304\|Ga0075340_1087686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	607	Open in IMG/M
3300014317\|Ga0075343_1208141	Not Available	514	Open in IMG/M
3300014320\|Ga0075342_1183530	Not Available	584	Open in IMG/M
3300014320\|Ga0075342_1188443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	578	Open in IMG/M
3300014322\|Ga0075355_1008032	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300014867\|Ga0180076_1026554	Not Available	972	Open in IMG/M
3300014873\|Ga0180066_1047343	Not Available	845	Open in IMG/M
3300014875\|Ga0180083_1060386	Not Available	792	Open in IMG/M
3300014881\|Ga0180094_1100355	Not Available	666	Open in IMG/M
3300014884\|Ga0180104_1154335	Not Available	678	Open in IMG/M
3300015259\|Ga0180085_1036219	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	1395	Open in IMG/M
3300015374\|Ga0132255_101348641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1077	Open in IMG/M
3300018075\|Ga0184632_10290829	Not Available	708	Open in IMG/M
3300018084\|Ga0184629_10268955	Not Available	894	Open in IMG/M
3300021090\|Ga0210377_10000193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	58646	Open in IMG/M
3300021090\|Ga0210377_10024947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4333	Open in IMG/M
3300021090\|Ga0210377_10417920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Candidatus Denitrolinea → Candidatus Denitrolinea symbiosum	792	Open in IMG/M
3300021090\|Ga0210377_10483070	Not Available	719	Open in IMG/M
3300025160\|Ga0209109_10296508	Not Available	773	Open in IMG/M
3300025313\|Ga0209431_10673018	Not Available	768	Open in IMG/M
3300025324\|Ga0209640_10444961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1064	Open in IMG/M
3300026095\|Ga0207676_10603686	Not Available	1054	Open in IMG/M
3300026118\|Ga0207675_101606561	Not Available	670	Open in IMG/M
3300027675\|Ga0209077_1047088	Not Available	1178	Open in IMG/M
3300027731\|Ga0209592_1018740	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300027955\|Ga0209078_1092836	Not Available	868	Open in IMG/M
3300028380\|Ga0268265_10567142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1080	Open in IMG/M
3300029304\|Ga0119857_1000062	All Organisms → cellular organisms → Bacteria	77088	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10169236	Not Available	605	Open in IMG/M
3300031949\|Ga0214473_10028450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6553	Open in IMG/M
3300034128\|Ga0370490_0099088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	953	Open in IMG/M
3300034128\|Ga0370490_0282757	Not Available	549	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.64%
Host-Associated	Host-Associated	20.39%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	39.81%
Aquatic	Environmental → Aquatic	38.83%
Plants	Host-Associated → Plants	20.39%
Bioreactor	Engineered → Bioreactor	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.83%
Freshwater	Environmental → Aquatic → Freshwater	17.48%
Sediment	Environmental → Aquatic → Sediment	14.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.74%
Marine	Environmental → Aquatic → Marine	6.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.97%
Unclassified	Engineered → Bioreactor → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.30%
Sediment	Environmental → Aquatic → Freshwater → Sediment	17.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.85%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.88%
Sand	Environmental → Terrestrial → Soil → Sand	1.94%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.97%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	17.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.71%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	12.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	12.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	6.80%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	4.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	3.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.94%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.97%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.97%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Anaerobic Bioreactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Anaerobic Bioreactor	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007614	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D1_MG	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012161	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027955	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029304	Anaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-Illumina	Engineered	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1034785112	3300001213	Wetland	MNTLEILVRILVTLIILYVLWLGYVVIVAYRWKQQDKLITRALAPRDEL*
JGIcombinedJ13530_1075879791	3300001213	Wetland	MNAFEILVRIVAALILLYILWHGYVVVVAYRWKQEDKLISRALASRDEP*
JGIcombinedJ13530_1091008672	3300001213	Wetland	MILETILTIVLTLFLLYILWHGYVVIVAYRWRSQDKLISRALAPRDDAL*
JGI20214J51088_103031412	3300003432	Wetland	MNTLEILVRIGVALIILYILWHGYVVIVAYRWKQQDKLISRALAPRDEL*
JGI20214J51650_107100773	3300003541	Wetland	MNAFAILFRIGAGLILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEL*
Ga0055469_101009763	3300003999	Natural And Restored Wetlands	MNAFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALA
Ga0055485_101877822	3300004067	Natural And Restored Wetlands	LVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0062594_1024340322	3300005093	Soil	MNTLEILVRIVLALIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDEVL*
Ga0065704_100279762	3300005289	Switchgrass Rhizosphere	MNAFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL*
Ga0065704_101584622	3300005289	Switchgrass Rhizosphere	MNTFEILVRILLALILLHILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0065704_101709113	3300005289	Switchgrass Rhizosphere	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0065704_106930412	3300005289	Switchgrass Rhizosphere	MILETILTIVLALFLLYILWHGYVVVVAYRWKQEDKLISRALTPRDDAL*
Ga0065705_101564543	3300005294	Switchgrass Rhizosphere	MNTFEILVRIVAGLILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEL*
Ga0065705_107195911	3300005294	Switchgrass Rhizosphere	MNTFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEAL*
Ga0065707_100480712	3300005295	Switchgrass Rhizosphere	MNTFEIFVRILLALIFLYILWHGYVVIVAYRWKQEDKLIS
Ga0070698_1002255643	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MILETILTIVLALFLLYILWHGYVVVVAYRWKQEDKLISRALAPRDDAL*
Ga0070698_1011245572	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNTFEILVRIVLALIFLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0081539_100558242	3300005985	Tabebuia Heterophylla Rhizosphere	MNTFEILVRIALALLFLYMLWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0075427_101111712	3300006194	Populus Rhizosphere	SQFHISGETMNTFEILVRILLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0075421_1002217631	3300006845	Populus Rhizosphere	TMILETILTIVLALFLLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0075430_1008260163	3300006846	Populus Rhizosphere	MILETILTIVLALFLLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0075431_1016619452	3300006847	Populus Rhizosphere	MNTFEILVRIALALLFLHMLWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0075434_1015393662	3300006871	Populus Rhizosphere	MNTFEILVRIVLALIFLYILWHGYVVIVAFRWKQEDE
Ga0075424_1026283721	3300006904	Populus Rhizosphere	MNTFEILVRIVLALIFLYILWHGYVVIVAFRWKQEDELISRALAPRDEVL*
Ga0075419_104125301	3300006969	Populus Rhizosphere	EILVRIALALLFLYMLWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0102946_13810271	3300007614	Soil	MNAFDILINILLVLIILYILWHGYVVVVAFRWKQADKLISRALAPRDEVL*
Ga0105098_108334162	3300009081	Freshwater Sediment	MNTFEILGRIVLALIFLYILWHGYVVIVAFRWKQEDKLISRALAPRDDVL*
Ga0105091_101035443	3300009146	Freshwater Sediment	MNAFEILVRIVLALIILYILWHGYVVIVAYRWRQADKLISRALAPRDESF*
Ga0114129_102661583	3300009147	Populus Rhizosphere	MNTFEILVRILLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0114129_115280331	3300009147	Populus Rhizosphere	MNTIEILVRLFLALSFLYILWHGYVVIVAYRWKHEDKLISRALAPRDEVL*
Ga0114129_118466283	3300009147	Populus Rhizosphere	RILLALIFLYILWHGYVVVVAYRWKQEDKLISRALAPRDELL*
Ga0105094_108576142	3300009153	Freshwater Sediment	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDDAL*
Ga0105092_105206051	3300009157	Freshwater Sediment	ILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALASRDEVL*
Ga0075423_115961542	3300009162	Populus Rhizosphere	MNTIEILVRIILALIFLYILWHGYVVVVAFRWKQEDKLISRALAPRDEVL*
Ga0105100_101220305	3300009166	Freshwater Sediment	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRD
Ga0105100_109129582	3300009166	Freshwater Sediment	MILETILTIALVLFFLDILWHGYVVIVAYRWKQADKLISRALAPRDET*
Ga0105104_105063522	3300009168	Freshwater Sediment	MNTFEILGRIVLALIFLYILWHGYVVVVAYRWKQADKLISRALAPRDDAL*
Ga0105104_107448411	3300009168	Freshwater Sediment	MILETILTIALVLFFLYILWHGYVVIVAYRWKQEDKLISRALAPRDDVL*
Ga0105104_107810641	3300009168	Freshwater Sediment	NPQNKSQFHNSGETMNAFEILVRIVLALSFLYILWHGYVVIVAYRWKQADKLISRALAPRDDAL*
Ga0105101_100291281	3300009171	Freshwater Sediment	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAP
Ga0115028_105786301	3300009179	Wetland	MNAFEILIRIVAALFLLYVLWHGYVVVIAYRWKQEDKLISRALAPRDEL*
Ga0105249_119154522	3300009553	Switchgrass Rhizosphere	MNTFEIFVRILLALIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDEVL*
Ga0105063_10804932	3300009804	Groundwater Sand	MNTFEILVRIVLALILLYILWHGYVVIVAYRWKQADKLISRALAPRDEVL*
Ga0126308_112025222	3300010040	Serpentine Soil	MNAFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0126312_103067522	3300010041	Serpentine Soil	MNTFEILVRFILALILRYILWHGYVVIVAYRWKQEDKLIFRALAPRDDAL*
Ga0126312_110265722	3300010041	Serpentine Soil	FEILVRIMLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEVL*
Ga0138514_1000439232	3300011003	Soil	MNTFEILVRIVLALILLYTLWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0137333_100031116	3300011413	Soil	MNTFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL*
Ga0137458_10866172	3300011436	Soil	MNAFEILVRIVLALVFLYILWHGYVVIVAYRWKQEDKLISRALAPRDEAL*
Ga0137427_104672222	3300011445	Soil	MNTFEILIRIVLALLILYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0137336_10237121	3300012161	Soil	MNTFEILVRIVLALLILYILWHGYIVLVAYRWKQEDKLISRALAPRDDVL*
Ga0137352_10044042	3300012164	Soil	MILETILTIALVLFFVYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL*
Ga0137365_101479622	3300012201	Vadose Zone Soil	MNTFEVLVRIVLAFIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDEVL*
Ga0137365_109206362	3300012201	Vadose Zone Soil	MNAFEILVRIVLALILLYILWHGYIVLVAYRWKQEDKLISRALAPRDEVL*
Ga0137459_10159112	3300012228	Soil	MNTFEILVRIVLALLILYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0137372_100633519	3300012350	Vadose Zone Soil	MNAFEILVRIVLALILLYILWHGYIVLVAYRWKQEDKLISRALAPRDDVL*
Ga0137372_106177292	3300012350	Vadose Zone Soil	MNTFEVLVRIVLAFIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDDVL*
Ga0137367_102161154	3300012353	Vadose Zone Soil	MNTFEVLVRIVLALIFLYILWHGYVGIVAYRWKQEDKLISR
Ga0137367_103364474	3300012353	Vadose Zone Soil	MNAFEILVRIVLALILLYILWHGYIVLVAYRWKQEDKLISR
Ga0137367_105890591	3300012353	Vadose Zone Soil	HISGESMNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0137366_101181514	3300012354	Vadose Zone Soil	MNAFEILVRIVLALIILYILWHGYVVIVAYRWKQEDKLISRALAPRDDVL*
Ga0137366_103206891	3300012354	Vadose Zone Soil	MNTFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEV
Ga0137369_101185424	3300012355	Vadose Zone Soil	MNAFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEVP*
Ga0137371_107855011	3300012356	Vadose Zone Soil	MNTFEILVRIVLALILLYILWHGYIVAVAYRWKQEDKLISRALAPRDDVL*
Ga0137368_102247085	3300012358	Vadose Zone Soil	MNVFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDDV
Ga0137368_107960662	3300012358	Vadose Zone Soil	MNAFEILVRIMLALILLYILWHGYVVVVAYRWKQEDKL
Ga0137373_105827512	3300012532	Vadose Zone Soil	MNTFEILIRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL*
Ga0137341_10359241	3300012676	Soil	KSQFHNSGETMNAFEILVRIVLASILLYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL
Ga0120188_10483642	3300013760	Terrestrial	CSTCSFNPQNKSQFYICGETMNAFEIFVCIVLALNFLYILWHGYVVVVAYRWKQEDKLISRALAPRDEF*
Ga0075320_10250213	3300014255	Natural And Restored Wetlands	MNAFEILVRIVLALILLYILWHGYVVIVAFRWRQADKLISRALAPRDEQL*
Ga0075325_12015852	3300014270	Natural And Restored Wetlands	MNAFEILVRILLALILLYILWHGYVVIVAFRWRQADKLISRALAPRDEQL*
Ga0075340_10876863	3300014304	Natural And Restored Wetlands	MNTFEILVRIVLALIFLYILWHGYVVIVAYRWKQADKLISRALAPRD
Ga0075343_12081411	3300014317	Natural And Restored Wetlands	MNTFEILIRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEAL*
Ga0075342_11835302	3300014320	Natural And Restored Wetlands	MNAFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDDVL*
Ga0075342_11884432	3300014320	Natural And Restored Wetlands	MHTFEILVRIVLALIFLYILWHGYVVIVAYRWKQADKLISRALAPRDEAL*
Ga0075355_10080323	3300014322	Natural And Restored Wetlands	MNTLEILVRIVVALIIFYILWHGYVVIVAYRWKQQDELISRALAPRDEL*
Ga0180076_10265542	3300014867	Soil	MNDFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL*
Ga0180066_10473431	3300014873	Soil	MNTFEILVRIVLALIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDEAL*
Ga0180083_10603861	3300014875	Soil	QNKSQFHISGETMNTFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEAL*
Ga0180094_11003551	3300014881	Soil	MNTFEILVRIVLALIFLYILWHGYVVIVAFRWKQEDKLISRALAPRDEVL*
Ga0180104_11543353	3300014884	Soil	IVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL*
Ga0180085_10362194	3300015259	Soil	MNTFEILVRIVLALIFLYILWHGYVVVVAYRWKQEDKLISRALAPRDEV
Ga0132255_1013486413	3300015374	Arabidopsis Rhizosphere	LFNPKNKSQFHNFGESMNTFEILVRIVLALIFLYILWHGYVVIVAFRWKQEDKLISRALAPRDQVL*
Ga0184632_102908291	3300018075	Groundwater Sediment	KSQFHIPGESMNTFEILVRIVLALIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDDIL
Ga0184629_102689553	3300018084	Groundwater Sediment	MILETILTIALVLFFVYILWHGYVVIVAFRWKQEDKLISRALAPRDEVR
Ga0210377_1000019362	3300021090	Groundwater Sediment	MILETILTIAMVLFFLYLLWHGYVVIVAYRWKQEDKLISRALAPRDDAL
Ga0210377_100249473	3300021090	Groundwater Sediment	MNAFEILVRIVFGLIVLYLLWNGYVVIVAYRNKQIDKLISRALAPRDDVL
Ga0210377_104179202	3300021090	Groundwater Sediment	MNTFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDDAL
Ga0210377_104830702	3300021090	Groundwater Sediment	MNNFEILVRIVLALIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDDIL
Ga0209109_102965082	3300025160	Soil	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDDVL
Ga0209431_106730181	3300025313	Soil	MILETILTIALVLFFLYILWHGYVVIVAYRWKQEDKLISRALAPRDDVL
Ga0209640_104449613	3300025324	Soil	MNTFEILVRILLALIFLYILWHGYVVLVAFRWKQEDKLISRALAPRDDVR
Ga0207676_106036861	3300026095	Switchgrass Rhizosphere	MNTFEILVRIVAGLILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEL
Ga0207675_1016065611	3300026118	Switchgrass Rhizosphere	EEIFEILVRIVLALIFLYILWHGYVVIVAYRWKQEDKLISRALAPRDEVL
Ga0209077_10470882	3300027675	Freshwater Sediment	MNAFEILVRIVLALIILYILWHGYVVIVAYRWRQADKLISRALAPRDESF
Ga0209592_10187403	3300027731	Freshwater Sediment	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL
Ga0209078_10928361	3300027955	Freshwater Sediment	MNTFEILVRIVLALILLYILWHGYVVVVAYRWKQEDKLISRALAPRDET
Ga0268265_105671422	3300028380	Switchgrass Rhizosphere	MNTFEILVRIVLALIFLYILWHGYVVVVAYRWKQEDKLISRALAPRDEVL
Ga0119857_10000627	3300029304	Anaerobic Bioreactor	MNIFDILIHISLALIILYILWHGYVVVVAFRWKQADKLISRALAPRDDTL
(restricted) Ga0255310_101692362	3300031197	Sandy Soil	MNTFEILVRIVLALLILYILWHGYIVLVAYRWKQEDKLISRALAPRDDAL
Ga0214473_100284508	3300031949	Soil	MNTFEILVRIVLALIFLYILWHGYVVIVAFRWKQEDKLISRALAPRDEAL
Ga0370490_0099088_530_682	3300034128	Untreated Peat Soil	MNTFEILVRIVLALILLYILWHGYVVIVAYRWKQEDKLISRALAPRDEAL
Ga0370490_0282757_146_298	3300034128	Untreated Peat Soil	LNTFDILVRVVLALIFLYILWHGYVVIVAYRWKQADKLISRALAPRDEAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters