Metagenome Family F099527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099527
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	138 residues
Representative Sequence	MAMDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIKDAIQGSDEWRRVHEPKK
Number of Associated Samples	87
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.98 %
% of genes near scaffold ends (potentially truncated)	29.13 %
% of genes from short scaffolds (< 2000 bps)	83.50 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.476 % of family members)
Environment Ontology (ENVO)	Unclassified (33.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.689 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.12% β-sheet: 0.00% Coil/Unstructured: 18.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01343	Peptidase_S49	18.45
PF00072	Response_reg	4.85
PF13374	TPR_10	2.91
PF13428	TPR_14	1.94
PF09976	TPR_21	0.97
PF01451	LMWPc	0.97
PF13145	Rotamase_2	0.97
PF13432	TPR_16	0.97
PF13181	TPR_8	0.97
PF14224	DUF4331	0.97
PF04093	MreD	0.97
PF01708	Gemini_mov	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	36.89
COG2891	Cell shape-determining protein MreD	Cell wall/membrane/envelope biogenesis [M]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.88 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	78.64 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	78.64 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.94 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	78.64 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.94 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	78.64 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.94 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	78.64 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.94 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100361419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2500	Open in IMG/M
3300000956\|JGI10216J12902_100019795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	704	Open in IMG/M
3300000956\|JGI10216J12902_102023803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	520	Open in IMG/M
3300000956\|JGI10216J12902_117135364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	513	Open in IMG/M
3300004156\|Ga0062589_102032992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	584	Open in IMG/M
3300004157\|Ga0062590_100915441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	823	Open in IMG/M
3300004480\|Ga0062592_100635529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	915	Open in IMG/M
3300004480\|Ga0062592_101142675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	724	Open in IMG/M
3300004643\|Ga0062591_101244766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	728	Open in IMG/M
3300005341\|Ga0070691_10424132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	754	Open in IMG/M
3300005345\|Ga0070692_10083106	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300005354\|Ga0070675_100234755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1601	Open in IMG/M
3300005354\|Ga0070675_100828916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	846	Open in IMG/M
3300005356\|Ga0070674_100817592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	806	Open in IMG/M
3300005365\|Ga0070688_100303792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1154	Open in IMG/M
3300005466\|Ga0070685_10811707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	690	Open in IMG/M
3300005549\|Ga0070704_100136083	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300005617\|Ga0068859_102715653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	544	Open in IMG/M
3300006195\|Ga0075366_10401813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	843	Open in IMG/M
3300006641\|Ga0075471_10003665	All Organisms → cellular organisms → Bacteria → Proteobacteria	9972	Open in IMG/M
3300006880\|Ga0075429_100289960	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300006880\|Ga0075429_100779797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	837	Open in IMG/M
3300006894\|Ga0079215_10622623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	709	Open in IMG/M
3300006969\|Ga0075419_11485247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	508	Open in IMG/M
3300007094\|Ga0102532_1183760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1416	Open in IMG/M
3300009094\|Ga0111539_10660606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1217	Open in IMG/M
3300009094\|Ga0111539_10735200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1149	Open in IMG/M
3300009094\|Ga0111539_12144323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	648	Open in IMG/M
3300009100\|Ga0075418_10324141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1644	Open in IMG/M
3300009156\|Ga0111538_10184386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	2649	Open in IMG/M
3300009156\|Ga0111538_10573674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1430	Open in IMG/M
3300009156\|Ga0111538_11197384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	960	Open in IMG/M
3300009156\|Ga0111538_11713484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	792	Open in IMG/M
3300009177\|Ga0105248_10226402	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300009553\|Ga0105249_12212460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	623	Open in IMG/M
3300009610\|Ga0105340_1079546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1299	Open in IMG/M
3300010045\|Ga0126311_11001572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	683	Open in IMG/M
3300010399\|Ga0134127_10594892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1134	Open in IMG/M
3300010403\|Ga0134123_10462742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1183	Open in IMG/M
3300011415\|Ga0137325_1128552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	579	Open in IMG/M
3300012038\|Ga0137431_1048386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1163	Open in IMG/M
3300012043\|Ga0136631_10249999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	699	Open in IMG/M
3300012469\|Ga0150984_121809336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	504	Open in IMG/M
3300012682\|Ga0136611_10000413	All Organisms → cellular organisms → Bacteria	27695	Open in IMG/M
3300012896\|Ga0157303_10081841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	742	Open in IMG/M
3300012903\|Ga0157289_10295479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	571	Open in IMG/M
3300012984\|Ga0164309_10467850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	957	Open in IMG/M
3300012985\|Ga0164308_10211339	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300012987\|Ga0164307_10793553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	752	Open in IMG/M
3300012987\|Ga0164307_11578819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	555	Open in IMG/M
3300013296\|Ga0157374_10289588	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300013306\|Ga0163162_10988168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	951	Open in IMG/M
3300014326\|Ga0157380_10691295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1024	Open in IMG/M
3300014969\|Ga0157376_10023366	All Organisms → cellular organisms → Bacteria	4838	Open in IMG/M
3300015200\|Ga0173480_10678941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	643	Open in IMG/M
3300015371\|Ga0132258_12784521	Not Available	1218	Open in IMG/M
3300015374\|Ga0132255_102168079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	847	Open in IMG/M
3300017792\|Ga0163161_10178726	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300017965\|Ga0190266_10126092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1105	Open in IMG/M
3300018067\|Ga0184611_1263422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	607	Open in IMG/M
3300018432\|Ga0190275_11400735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	776	Open in IMG/M
3300018469\|Ga0190270_12403638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	589	Open in IMG/M
3300018476\|Ga0190274_10050896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	2997	Open in IMG/M
3300018481\|Ga0190271_10828653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1050	Open in IMG/M
3300018481\|Ga0190271_12028614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	684	Open in IMG/M
3300018481\|Ga0190271_12502590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	618	Open in IMG/M
3300019377\|Ga0190264_10086347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1419	Open in IMG/M
3300020009\|Ga0193740_1064011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	559	Open in IMG/M
3300020020\|Ga0193738_1011372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	2895	Open in IMG/M
3300020074\|Ga0194113_10034638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	5181	Open in IMG/M
3300020083\|Ga0194111_10078006	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300020084\|Ga0194110_10009662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	10827	Open in IMG/M
3300020202\|Ga0196964_10036498	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300020202\|Ga0196964_10053042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1715	Open in IMG/M
3300020578\|Ga0194129_10390196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	735	Open in IMG/M
3300023275\|Ga0247776_10229620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	696	Open in IMG/M
3300025635\|Ga0208147_1089559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	753	Open in IMG/M
3300025732\|Ga0208784_1116500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	797	Open in IMG/M
3300025872\|Ga0208783_10067088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1614	Open in IMG/M
3300025893\|Ga0207682_10534228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	555	Open in IMG/M
3300025925\|Ga0207650_10573738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	947	Open in IMG/M
3300025930\|Ga0207701_10853145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	765	Open in IMG/M
3300025936\|Ga0207670_11558751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	562	Open in IMG/M
3300025941\|Ga0207711_10348591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1371	Open in IMG/M
3300026075\|Ga0207708_10071322	All Organisms → cellular organisms → Bacteria	2661	Open in IMG/M
3300027533\|Ga0208185_1062455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	889	Open in IMG/M
3300028007\|Ga0247718_1005386	All Organisms → cellular organisms → Bacteria	3807	Open in IMG/M
3300028809\|Ga0247824_10290806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	917	Open in IMG/M
3300031562\|Ga0310886_10518951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	721	Open in IMG/M
3300031824\|Ga0307413_10070008	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300031852\|Ga0307410_11211517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	658	Open in IMG/M
3300031892\|Ga0310893_10013618	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300031903\|Ga0307407_11278794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	575	Open in IMG/M
3300031940\|Ga0310901_10103082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1033	Open in IMG/M
3300031943\|Ga0310885_10304543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	824	Open in IMG/M
3300031995\|Ga0307409_100480969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1205	Open in IMG/M
3300031995\|Ga0307409_101725038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	655	Open in IMG/M
3300032002\|Ga0307416_103038580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	561	Open in IMG/M
3300032012\|Ga0310902_10984215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	585	Open in IMG/M
3300032017\|Ga0310899_10328179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	717	Open in IMG/M
3300032017\|Ga0310899_10676708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	522	Open in IMG/M
3300032126\|Ga0307415_100217650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1529	Open in IMG/M
3300034149\|Ga0364929_0013598	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.05%
Host-Associated	Host-Associated	34.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.51%
Plants	Host-Associated → Plants	34.95%
Aquatic	Environmental → Aquatic	15.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.13%
Freshwater	Environmental → Aquatic → Freshwater	6.80%
Sediment	Environmental → Aquatic → Sediment	4.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.85%
Marine	Environmental → Aquatic → Marine	3.88%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.97%
Floodplain	Environmental → Terrestrial → Floodplain	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.30%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.83%
Lake	Environmental → Aquatic → Freshwater → Lake	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Coastal	Environmental → Aquatic → Marine → Coastal	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.91%
Ice	Environmental → Aquatic → Freshwater → Ice	1.94%
Sand	Environmental → Terrestrial → Soil → Sand	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.97%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.94%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007094	Freshwater lake microbial communities from Singapore - a non-axenic Oscillatoriales culture (M13A)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300028007	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-1-E_D	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1003614192	3300000559	Soil	MAIDRSRLITTILLVVVVILVGQVYWQQRRIEQMQFSMEFQQKQFDEQAGKLAADRLKGHRGDVMQAAQWLHQYYASDEGLRRPDGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIRDAIQGSDEWRRAHSAKK*
JGI10216J12902_1000197952	3300000956	Soil	MAMDRSRLITTILLVVVVVLLGQVYWQNRRIAQLQSSMEFQQRQFETQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQSSDEWRRVHAPK*
JGI10216J12902_1020238031	3300000956	Soil	MAIDRSRLITTILAVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFSEQTGKLAAEKLKGHRADVMQAAQWLHEYYGSDEGLRRPDGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQLIRNAIQGSDEWRRVHAPKK*
JGI10216J12902_1171353642	3300000956	Soil	WQNRRIAQLQSSMEFQQRQFEAQAGKLAAEKLKGYRGDIMQSAQWLHDYYKSPEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHAAK*
Ga0062589_1020329921	3300004156	Soil	MPMDRFRLITTILVVVIVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRANGLWRSDQKQPDFEAIGAWVMDVYLNARIEGKTDDEAKKMITDAIQGSDEWRRVHESKK*
Ga0062590_1009154411	3300004157	Soil	MAMDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRANGLWRSDQKQPDFEAIGAWVMDVYLNARIEGKTDDEAKKMITDAIQGSDEWRR
Ga0062592_1006355291	3300004480	Soil	MAMDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRANGLWRSDQKQPDFEAIGAWVMDVYLNARIEGKTDDEAKKMITDAIQGSDEWRRVHESKK*
Ga0062592_1011426752	3300004480	Soil	MAIDRSRLVTTILLVVVVVLIGQVYWQNRRIAQLQSSLEFQQRQFEEQVGKLAAEKLKNNRADVMQAAQWLHHYYASPEGLHRADGLWRSDQKQPDFEAIGAWIIDVYLTARVEG
Ga0062591_1012447661	3300004643	Soil	MAIDRSRLITTILLVIVIILIGQVYWQQRRIEQMQFSMEFQQRQFDEQVGKLAADRLKGHRGDVMQAAQWLHHYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIMDAIQGSDEWRRAHAPKK*
Ga0070691_104241322	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQSAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQMIKDAIQGSDEWRRVHESKK*
Ga0070692_100831062	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQMIKDAIQGSDEWRRVHESKK*
Ga0070675_1002347551	3300005354	Miscanthus Rhizosphere	LITTILLVIVIILIGQVYWQQRRIEQMQFSMEFQQRQFDEQVGKLAADRLKGHRGDVMQAAQWLHHYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMITDAIQGSDEWRRAHAPKK*
Ga0070675_1008289161	3300005354	Miscanthus Rhizosphere	MAMDRSRLITTILLVVVIILLGQVYWQNRRIAQLQTSMEFQQKQFDAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHASK*
Ga0070674_1008175921	3300005356	Miscanthus Rhizosphere	MPMDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRSDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQMIKDAIQGSDEWRRVHESKK*
Ga0070688_1003037922	3300005365	Switchgrass Rhizosphere	MAIDRSRLITTILLVVVVVLIGQVYWQNRRIAQLQSSIEFQQRQFEQQVGKLAAEKLKNNRADVMQAAQWLHQYYASPEGLRRPDGLWRPDQKQPDFEAIGAWIIDVYLTARIEGKTDEEAKKMIKDAIQGSDEWKRVHPAK*
Ga0070685_108117072	3300005466	Switchgrass Rhizosphere	VVVVLIGQVYWQNRRIAQLQSSIEFQQRQFEQQVGKLAAEKLKNNRADVMQAAQWLHQYYASPEGLRRPDGLWRPDQKQPDFEAIGAWIIDVYLTARIEGKTDEEAKKMIKDAIQGSDEWKRVHPAK*
Ga0070704_1001360832	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRLINTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQMIKDAIQGSDEWRRVHESKK*
Ga0068859_1027156531	3300005617	Switchgrass Rhizosphere	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRSDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQMIKDAIQGSD
Ga0075366_104018132	3300006195	Populus Endosphere	MAIDRSRLITTVLLVVVVVLGGWVYWQKSRIAQLESSMAFQQRQFEAQVDKLAAEKLKGQRGNVLQAAQWLHEYYKSDDGLKRADGLWRSDQKQPDFEALGAWIFDVYLNARVEGKSEEEARKMIMDAIRGSDEWHRVHPAAK*
Ga0075471_100036652	3300006641	Aqueous	MDRSRLISTVLGIVILVLVGQVYWQSRRITQLQSSMEFQQRQFEAQVGKLATERLKGHRGDVMQAAQWLHQYYAADEGLRRADGLWRSDLKQPDFEALGAWIIDVYMNARVEGKTDEEAKQLIKDAIQGSDEWKRVHSK*
Ga0075429_1002899602	3300006880	Populus Rhizosphere	MDRSRLLTTILVVVVVILIGQVYWQQRRIQQLQFSMAFQQRQFDDQAGKLAAERLKGYRADVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEALGAWIIDVYLNARVEGQTDEEAKKSIKDAIQGSDEWRRVHETKK*
Ga0075429_1007797971	3300006880	Populus Rhizosphere	MAIERSRLITTVLLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEEQAGKLAAEKLKGYRGDVMQAAQWLHQYYASPEGLRRADGLWRSDQKQPDFEALGAWVIDVYLNARVEGKTDEEAKKMITDAIQGS
Ga0079215_106226231	3300006894	Agricultural Soil	MDRSRLLTTILVVVVVVLIGQVYWQHRRIEQLQFSMEFQQRQFDEQSGKLASEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEALGAWVIDVYLNARVEGKSDEEAKKLIKDAIQGSDEWRRVHEPKK*
Ga0075419_114852471	3300006969	Populus Rhizosphere	MAIDRSRLITTILLIIVVVLIGQVYWQQRRIEQMQFSMEFQQRQFNEQAGKLAVERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMITDAIQGSDEWRRA
Ga0102532_11837602	3300007094	Freshwater Lake	MDRSRLISTVLGIVILVLVGQVYWQSRRITQLQSSMEFQQRQFEAQVGKLAAERLKGHRGDVMQAAQWLHQYYAADEGLRRADGLWRSDLKQPDFEALGAWIIDVYMNARVEGKTDEEAKQLIKDAIQGSDEWKRVHSK*
Ga0111539_106606062	3300009094	Populus Rhizosphere	VILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIKDAIQGSDEWRRVHEKK*
Ga0111539_107352001	3300009094	Populus Rhizosphere	MAIDRSRLITTILLVIVVVLVGQVYWQQRRIEQMQFSMEFQQRQFNEQVGKLAVERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKSDEEAKKMITDAIRSSDEWRRAHAPKK*
Ga0111539_121443231	3300009094	Populus Rhizosphere	MDRSRLLTTILVVVVVILIGQVYWQQRRIQQLQFSMAFQQRQFDDQAGKLAAERLKGYRADVMQAAQWLHQYYASDEGLRRTDGLWRSDQKQPDFEALGAWIIDVYLNARVEGQTDEEAKKSIKDAIQGSDEWRRVHETKK*
Ga0075418_103241412	3300009100	Populus Rhizosphere	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRGDVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIKDAIQGSDEWRRVHAK*
Ga0111538_101843863	3300009156	Populus Rhizosphere	MAIDRSRLITTILLIIVVVLIGQVYWQQRRIEQMQFSMEFQQRQFNEQAGKLAVERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKSDEEAKRMITDAIRGSDEWRRAHAPKK*
Ga0111538_105736742	3300009156	Populus Rhizosphere	MDRSRLLTTILVVVVVILIGQVYWQQRRIQQLQFSMAFQQRQFDDQAGKLAAERLKGYRADVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEALGAWIIDVYLNARVEGKTDEEAKKSIKDAIQGSDEWRRVHETKK*
Ga0111538_111973841	3300009156	Populus Rhizosphere	DRSRLITTILLIVVVVLIGQVYWQQRRIEQMQFSMEFQQKQFDEQAGKLAAERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDAEAKKMITDAIQGSDEWRRAHAPKK*
Ga0111538_117134842	3300009156	Populus Rhizosphere	MAMDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIKDAIQGSDEWRRVHEPKK*
Ga0105248_102264022	3300009177	Switchgrass Rhizosphere	MDRSRLITSLLLIVVVVLIGQVFWQQRRISQMQSSMEFQQRQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHTAK*
Ga0105249_122124601	3300009553	Switchgrass Rhizosphere	MAIDRSRLITTILLVLVVILIGQVYWQQRRIEQMRVSMEFQQKQFDQQAGKLAADRLKGHRADVMNAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDEEAKKMIRDAIQGSDEWRRAHA
Ga0105340_10795462	3300009610	Soil	MDRSRLITTILVVVVVILIGQVYWQQRRITQMQFAMDFQQKQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARIEGKTDEEAKKLIRDAIQGSDEWRRVHESKK*
Ga0126311_110015721	3300010045	Serpentine Soil	MAIDRSRLVTTILLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQVSKLAAEKLKNQRGNVLQASQWLHEYYKSDEGLRRADGLWRPDQRQPDFEALGAWIFDVYLNARVEGKSEDEARKMITDAIQGSDEWRRVHATK*
Ga0134127_105948922	3300010399	Terrestrial Soil	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRPDQKQPDFEAIGAWIIDVYLNARIEGKTDDEAKKMIKDAIQGSDEWRRVHGPKK*
Ga0134123_104627422	3300010403	Terrestrial Soil	MAIDRSRLITTILLVIVIILGGQVYWQQRRIEQMQFSMEFQQRQFDEQVGKLAVDRLKGHRADVMQAAQWLHHYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMITDAIQGSDEWRRAHAAKK*
Ga0137325_11285521	3300011415	Soil	MDRSRLITTILVVVVVILIGQVYWQQRRITQMQFAMDFQQKQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDEEAKQLIKDAIQGSDEWRRVHEAKK*
Ga0137431_10483862	3300012038	Soil	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARIEGKTDEEAKKMIRDAIQGSDEWRRVHEPKK*
Ga0136631_102499992	3300012043	Polar Desert Sand	MAIDRSRILTTILLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQVGKLAAEKLKNQRGNVLQAAQWLHDYYKSDEGLRRADGLWRPDQKQPDFEALGAWIFDVYLNARVEGKSDEEARKLITDAIQGSDEWRRVHAAK*
Ga0150984_1218093362	3300012469	Avena Fatua Rhizosphere	GQVYWQNRRIAQLQSSMEFQQRQFEAQVGKLAAEKLKNNRADVMQAAQWLHEYYKSPEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARIEGKTDAEAKQLIKDAIQGSDEWKRVHAAK*
Ga0136611_1000041311	3300012682	Polar Desert Sand	MAIDRSRILTTLLLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQVGKLAAEKLKNQRGNVLQAAQWLHDYYKSDEGLRRADGLWRPDQKQPDFEALGAWIFDVYLNARVEGKSDEEARKLITDAIQGSDEWRRVHATK*
Ga0157303_100818411	3300012896	Soil	MDRSRLITTILLVVVIILLGQVYWQNRRIAQLQASMEFQQRQFEAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHASK*
Ga0157289_102954791	3300012903	Soil	MAIDRSRLITTILLVIVIILIGQVYWQQRRIEQMQFSMEFQQRQFDEQVGKLAADRLKGHRGDVMQAAQWLHHYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIMDAIQGSDEWRRVHSK*
Ga0164309_104678501	3300012984	Soil	MDRSRLITSLLLIVVVVLVGQVFWQQRRISQMQSSMEFQQHQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHSAK*
Ga0164308_102113393	3300012985	Soil	WQQRRISQMQSSMEFQQRQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHTAK*
Ga0164307_107935531	3300012987	Soil	MDRSRLITTILLVVVVVLLGQVYWQNRRIAQLQTSMEFQQKQFDAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHASK*
Ga0164307_115788191	3300012987	Soil	MDRSRLITSLLLIVVVVLVGQVFWQQRRISQMQSSMEFQQHQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWK
Ga0157374_102895881	3300013296	Miscanthus Rhizosphere	LITSLLLIVVVVLIGQVFWQQRRISQMQSSMEFQQRQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHSAK*
Ga0163162_109881682	3300013306	Switchgrass Rhizosphere	MDRSRLITSLLLIVVVVLIGQVFWQQRRISQMQSSMEFQQRQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHSAK*
Ga0157380_106912952	3300014326	Switchgrass Rhizosphere	MDRSRLITTILLVVVVILLGQVYWQNRRIAQLQTSMEFQQKQFDAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARFEGKTDAEAKKLITDAIQGSDEWRRVHASK*
Ga0157376_100233663	3300014969	Miscanthus Rhizosphere	MDRSRLITSLLLIVVVVLVGQVFWQQRRISQMQSSMEFQQHQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHTAK*
Ga0173480_106789411	3300015200	Soil	MDRSRLITTILLVVVVILLGQVYWQNRRIAQLQTSMEFQQKQFDAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHASK*
Ga0132258_127845212	3300015371	Arabidopsis Rhizosphere	MAMDRSRLLTSLLLIVVVVLVGQVFWQQRRISQLQNSMEFQQRQFEEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLRRPNGLWREDQKQPDFEALGAWIYDIYLNARVEGKSEEEARKLITDAIQGSDEWRRVHSGK*
Ga0132255_1021680792	3300015374	Arabidopsis Rhizosphere	GQVFWQQRRISQMQSSMEFQQRQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHSAK*
Ga0163161_101787262	3300017792	Switchgrass Rhizosphere	MDRSRLITSLLLIVVVVLVGQVFWQQRRISQMQSSMEFQQHQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEEEARKLITDAIQGSDEWKRVHSAK
Ga0190266_101260921	3300017965	Soil	MAIDRSRILTTILLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQVGKLAAEKLKNQRGNVLQAAQWLHDYYKSDQGLRRADGLWRSDQKQPDFEALGAWIFDVYLNARVEGKSEEEARKLITDAIQGSDEWRRVHAAK
Ga0184611_12634221	3300018067	Groundwater Sediment	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMHFAQEFQQKQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRSDGLWRNDQKQPDFEAIGAWIIDVYLNARIEGKTDEEAKQLIKDAIQGSDEWKRVHAK
Ga0190275_114007352	3300018432	Soil	MAIDRSRLLTTILVVVVVILIGQVYWQQRRIQQLEFSMDFQQRQFDEKTGELAAERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEALGAWIIDVYLNARVEGKSDEEAKQLIKDAIQGSDEWRRVHAPKK
Ga0190270_124036381	3300018469	Soil	MAMDRSRLITTILLVVVVILLGQVYWQNRRITQLQSSMEFQQRQFEAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARVESKTDEEAKKMIKDAIQGSDEWRRVHASK
Ga0190274_100508962	3300018476	Soil	MAIDRSRLITTILLIIVVILIGQVYWQQRRIEQMQFSMEFQQKQFDEQAGKLAAERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDAEAKKMITDAIQGSDEWRRVHAAKK
Ga0190271_108286532	3300018481	Soil	MAIDRSRLLTTILVVVVVILIGQVYWQQRRIQQLQFSMEFQQRQFDERAGKLAAEKLKGYRSDVMQAAQWLHRFYASDEGLRRSDGLWRSDQKQPDFEALGAWIIDVYLNARVEGKSDEEAKQLIKAAIQGSDEWRRVHEPKK
Ga0190271_120286141	3300018481	Soil	MAIDRSRILTTILLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQVGKLAAEKLKNQRGNVLQAAQWLHEYYKSDEGLRRADGLWRPDQKQPDFEALGAWIFDVYLNARVEGKSDEEARKLITDAIQGSDEWRRVHSK
Ga0190271_125025901	3300018481	Soil	MAIDRSRLITTILLVIVVILIGQVYWQQRRIEQMQFSMEFQQKQFDEQVGKLAAERLKGHRADVMNAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDIYLNARIEGKTDAEAKKLITDAIQGSDEWRRVHAAKK
Ga0190264_100863471	3300019377	Soil	MAIDRSRLLTTILAVVVVILIGQVYWQQRRIQQLEFSMDFQQRQFEEKTGELAAERLKGHRADVMQAAQWLHQYYASEEGLRRPDGLWRPDQKQPDFEALGAWIIDVYLNARVEGKSDEEAKQLIKDAIQGSDEWRRVHAPKK
Ga0193740_10640112	3300020009	Soil	QYNLCRMAIDRSRLITTILAVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFSEQSGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRPDGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQLIRDAIQGSDEWRRVHAPKK
Ga0193738_10113723	3300020020	Soil	MAIDRSRLITTILAVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFSEQSGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRPDGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQLIRDAIQGSDEWRRVHAPKK
Ga0194113_100346384	3300020074	Freshwater Lake	MDRSRPITTVLLVIVVVLLGQVYYQNRRTSQLQASMDFQQRQFEQQVGKLAAERLKGHRADLMQAAQWLHQYYASDEGLRRADGLWRSDLKQPDFEAIGAWVLDVYLNARVEGKTDEQAKQLVRDAIQGSDEWRRLHATK
Ga0194111_100780063	3300020083	Freshwater Lake	MDRSRSITTVLLVIVVVLLGQVYYQNRRTSQLQASMDFQQRQFEQQVGKLAAERLKGHRADLMQAAQWLHQYYASDEGLRRTDGLWRSDLKQPDFEAIGAWVLDVYLNARVEGKTDEQAKQLV
Ga0194110_100096627	3300020084	Freshwater Lake	MDRSRSITTVLLVIVVVLLGQVYYQNRRTSQLQASMDFQQRQFEQQVGKLAAERLKGHRADLMQAAQWLHQYYASDEGLRRADGLWRSDLKQPDFEAIGAWVLDVYLNARVEGKTDEQAKQLVRDAIQGSDEWRRLHATK
Ga0196964_100364982	3300020202	Soil	MDRSRLITTVLLVVVVILIGQVYWQNNRIGQLQSSMEFQQTQFDQQVGKLAAERLKGHRADIMQAAQWLHQYYASDEGLRRADGLWRSDQQQPDFEALGAWIMDVYLNARVEGKTDEEAKQIIKDAIQGSDEWKRVHSR
Ga0196964_100530421	3300020202	Soil	MDRSRLITSILIIVVVVLIGQVFWQQRRISQLQYAMEFQQRQFEEQSGKLAAEKLKNHRSDVVQAAQWLHEYYKSDAGLRRANGLWRDDQKQPDFEAIGAWIYDVYLNARVEGKTEEEARKLITDAIQGSDEFRRVHAAK
Ga0194129_103901961	3300020578	Freshwater Lake	MMDRSRSITTVLLVIVVVLLGQVYYQNRRTSQLQASMDFQQRQFEQQVGKLAAERLKGHRADLMQAAQWLHQYYASDEGLRRADGLWRSDLKQPDFEAIGAWVLDVYLNARVEGKTDEQAKQLVR
Ga0247776_102296201	3300023275	Plant Litter	MAMDRSRLITTILLVVVIILLGQVYWQNRRIAQLQTSMEFQQKQFDAQAGKLAAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHASK
Ga0208147_10895591	3300025635	Aqueous	MDRSRLISTVLGIVILVLVGQVYWQSRRITQLQSSMEFQQRQFEAQVGKLATERLKGHRGDVMQAAQWLHQYYAADEGLRRADGLWRSDLKQPDFEALGAWIIDVYMNARVEGKTDEEAKQLIKDAIQGSDEWKRV
Ga0208784_11165001	3300025732	Aqueous	MDRSRLISTVLGIVILVLVGQVYWQSRRITQLQSSMEFQQRQFEAQVGKLAAERLKGHRGDVMQAAQWLHQYYAADEGLRRADGLWRSDLKQPDFEALGAWIIDVYMNARVEGKTDEEAKQLIKDAIQGSDEWKRVHSK
Ga0208783_100670881	3300025872	Aqueous	SRLISTVLGIVILVLVGQVYWQSRRITQLQSSMEFQQRQFEAQVGKLATERLKGHRGDVMQAAQWLHQYYAADEGLRRADGLWRSDLKQPDFEALGAWIIDVYMNARVEGKTDEEAKQLIKDAIQGSDEWKRVHSK
Ga0207682_105342281	3300025893	Miscanthus Rhizosphere	MAIDRSRLITTILLVIVIILIGQVYWQQRRIEQMQFSMEFQQRQFDEQVGKLAADRLKGHRGDVMQAAQWLHHYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMIMDAIQ
Ga0207650_105737382	3300025925	Switchgrass Rhizosphere	MAMDRSRLITTILLVVVIILLGQVYWQNRRIAQLQTSMEFQQKQFDAQAGKLSAEKLKGYRADIMQSAQWLHQYYASPEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARVEGKTDAEAKKLITDAIQGSDEWRRVHASK
Ga0207701_108531452	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDRSRLITTILLVVVVVLIGQVYWQNRRIAQLQSSIEFQQRQFEQQVGKLAAEKLKNNRADVMQAAQWLHQYYASPEGLRRPDGLWRPDQKQPDFEAIGAWIIDVYLTARIEGKTDEEAKKMIKDAIQGSDEWKRVHPAK
Ga0207670_115587511	3300025936	Switchgrass Rhizosphere	IGQVYWQNRRIAQLQSSIEFQQRQFEAQVGKLAADKLKNNRADVMQAAQWLHQYYASPEGLRRPDGLWRPDQKQPDFEAIGAWIIDVYLTARIEGKTDEEAKKMIKDAIQGSDEWKRVHPAK
Ga0207711_103485911	3300025941	Switchgrass Rhizosphere	MDRSRLITSLLLIVVVVLIGQVFWQQRRISQMQSSMEFQQRQFDEQSGKLAIEKLRNHRGEVVQAAQWLHEYYKSDAGLKRPNGLWREDQKQPDFEAFGAWIYDVYLNARVEGKSEAEARKLI
Ga0207708_100713222	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRLITTILVVVVVILIGQVYWQQRRIAQMQFAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRAEGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKQMIKDAIQGSDEWRRVHESKK
Ga0208185_10624552	3300027533	Soil	MSMDRSRLITTILVVVVVILIGQVYWQQRRITQMQFAMDFQQKQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEAIGAWIIDVYLNARIEGKTDEEAKKLIRDAIQGSDEWRRVHESKK
Ga0247718_10053863	3300028007	Soil	MDRSRLITTILAIVVVVLIGQVYWQNRRITQLQSSMEFQQRQFEQQVGKLAAERLKGHRGDVMQAAQWLHQYYASDEGLRRSDGLWRSDQKQPDFEAIGAWVIDVYMNARVEGKTDEEAKQLIKDAIQGSDEWKRVHAQK
Ga0247824_102908061	3300028809	Soil	MAIDRSRLVTTILLLIVIILAGQVYWQQRRIEQMQFSMEFQRKQFDEQVGKLAAERLKGHRADVMLAAQWLHQYYASDAGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDEEAKKMITDAIQGSDEWRRVHAAKK
Ga0310886_105189512	3300031562	Soil	MAIERSRLITTVLLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEEQAGKLAAEKLKGYRGDVMQAAQWLHQYYASPEGLRRADGLWRSDQKQPDFEALGAWVIDVYLNARVEGKTDEEAKQLIKDAIQGSDEWRRVHEKK
Ga0307413_100700082	3300031824	Rhizosphere	MAIDRSRLLTTVLVVVVIVLIGQVYWQRNRIAQQQNAMEFQQRQFDEQAGQLAAERLKGYRSDIMQAAQWLHEYYASDEGLRRPDGLWRGDQKQPDFEAIGAWVMDVYLNARVEGKTDEQAKQMIKDAIQGSDEWKRVHAPK
Ga0307410_112115171	3300031852	Rhizosphere	MAIDRSRLLTTILVVVVIVLIGQVYWQRNRIAQQQNAMEFQQRQFDEQAGQLAAERLKGYRADIMQAAQWLHQYYASDEGLRRADGLWRSDLKQPDFEAFGAWIMDVYLNARVEGKTDDEAKQMIKDAIQGSDEWKRVHAPK
Ga0310893_100136182	3300031892	Soil	MAIDRSRLITTILLVLVVILIGQVYWQQRRIEQMRVSMEFQQKQFDQQAGKLAADRLKGHRADVMNAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDEEAKKMIRDAIQGSDEWRRAHAPKK
Ga0307407_112787941	3300031903	Rhizosphere	MAIDRSRILTTILLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQVNKLAAEKLKNQRGNVLQAAQWLHEYYKSDEGLKRADGLWRPDQKQPDFEALGAWIFDVYLNAKVEGKTEE
Ga0310901_101030822	3300031940	Soil	MAIDRSRLITTILLVLVVILIGQVYWQQRRIEQMRVSMEFQQKQFDQQAGKLAADRLKGHRADVMNAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDEEAKKMITDAIQGSDEWRRAHAPKK
Ga0310885_103045432	3300031943	Soil	QRRLEQMQVSMEFQQKQFDQQVGKLASDRLKGHRGDVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARVEGKTDEEAKKMITDAIQGSDEWRRAHAPKK
Ga0307409_1004809692	3300031995	Rhizosphere	MAIDRSRLLTTILLVVVVVLLGQVYWQNRRIAQLQSSMEFQQRQFETQVSKLAAEKLKNQRGNVLQASQWLHEYYKSDEGLRRADGLWRPDQKQPDFEALGAWIFDVYLNAKVEGKSEEEARKMITDAIQGSDEWRRMHATK
Ga0307409_1017250381	3300031995	Rhizosphere	MAIDRSRLLTTILVVVVIVLIGQVYWQRNRIAQQQNAMEFQQRQFDEQAGKLAAERLKGYRADIMQAAQWLHQYYASDEGLRRADGLWRSDLKQPDFEAFGAWIMDVYLNARVEG
Ga0307416_1030385801	3300032002	Rhizosphere	MAIDRSRLITTVLLVVVVVLIGQVYWQNRRIAQLQSSMEFQQRQFEAQAGKLAAEKLKNQRGDVMQAAQWLHQYYASPEGLRRADGLWRPDQKQPDFEAIGAWIIDVYLNARVEGKTDEEAKQMIKDAIQGSDEWKRVHASK
Ga0310902_109842151	3300032012	Soil	MAMDRSRLITTILLVVVVILIGQVYWQNRRIAQLQSSMEFQQRQFEAQVGKLAAEKLKNQRGNVLQAAQWLHEYYKSPEGLRRADGLWRPDQKQPDFEALGAWIFDVYLNARVEGKSEEEARKLITDAIQGSDEWRRVHSAK
Ga0310899_103281791	3300032017	Soil	MDRSRLLTTILVVVVVILIGQVYWQQRRIQQLQFSMEFQQRQFDEQAGKLAAERLKGYRADVMMAAQWLHQYYASDEGLRRADGLWRSDQKQPDFEALGAWIMDVYLSARVEGKTDE
Ga0310899_106767081	3300032017	Soil	MAIDRSRLITTILLVIVVVLVGQVYWQQRRIEQMQFSMEFQQRQFNEQVGKLAVERLKGHRADVMQAAQWLHQYYASDEGLRRADGLWRPDQKQPDFEAIGAWVIDVYLNARIEGKSDEEAKRMITDAIRGSDEWRR
Ga0307415_1002176502	3300032126	Rhizosphere	MAIDRSRLLTTILVVVVIVLIGQVYWQRNRIAQQQNAMEFQQRQFDEQAGKLAAERLKGYRADIMQAAQWLHQYYASDEGLRRADGLWRSDLKQPDFEAFGAWIMDVYLNARVEGKTDDEAKQMIKDAIQGSDEWKRVHAPK
Ga0364929_0013598_877_1302	3300034149	Sediment	MDRARLITTILVVVVVILIGQVYWQQRRITQMQSAMDFQQRQFDEQAGKLAAEKLKGHRADVMQAAQWLHQYYASDAGLRRADGLWRSDQKQPDFEAIGAWVIDVYLNARIEGKTDEEAKKMITDAIQGSDEWRRVHESKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099527

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences