Metagenome / Metatranscriptome Family F099525

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	116 residues
Representative Sequence	GRYHGGRIDLCTKDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQIAPLLPEATDAPTLARLYELLTGREPITPAAR
Number of Associated Samples	88
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	88.35 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (19.417 % of family members)
Environment Ontology (ENVO)	Unclassified (31.068 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.864 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.68% β-sheet: 0.00% Coil/Unstructured: 55.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
a.211.1.7: HD domain from Cas3-like	d4qqwa1	4qqw	0.56455
d.92.1.14: Anthrax toxin lethal factor, N- and C-terminal domains	d4dv8a2	4dv8	0.56415
d.92.1.0: automated matches	d4iuwa_	4iuw	0.54709
d.92.1.14: Anthrax toxin lethal factor, N- and C-terminal domains	d1j7na1	1j7n	0.53165
c.37.1.12: ABC transporter ATPase domain-like	d1sgwa1	1sgw	0.52933

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01979	Amidohydro_1	16.50
PF13147	Obsolete Pfam Family	3.88
PF00496	SBP_bac_5	2.91
PF12344	UvrB	1.94
PF03704	BTAD	1.94
PF00005	ABC_tran	1.94
PF00486	Trans_reg_C	0.97
PF00497	SBP_bac_3	0.97
PF02151	UVR	0.97
PF08281	Sigma70_r4_2	0.97
PF00400	WD40	0.97
PF04430	DUF498	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.94
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.94
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.97
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	36.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.07 %
Unclassified	root	N/A	1.94 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.07 %
Unclassified	root	N/A	1.94 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.68 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	10.68 %
Unclassified	root	N/A	1.94 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.71 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	5.83 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	4.85 %
Unclassified	root	N/A	1.94 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.71 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	4.85 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4.85 %
Unclassified	root	N/A	1.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.71 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	4.85 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4.85 %
Unclassified	root	N/A	1.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.71 %
unclassified Ilumatobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter	4.85 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4.85 %
Unclassified	root	N/A	1.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	36.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.71 %
Ilumatobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter → Ilumatobacter sp.	4.85 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4.85 %
Unclassified	root	N/A	1.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9054397	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1032	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13947198	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	682	Open in IMG/M
3300000890\|JGI11643J12802_10121308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter → Ilumatobacter sp.	893	Open in IMG/M
3300000956\|JGI10216J12902_101428650	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300000956\|JGI10216J12902_105295479	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300000956\|JGI10216J12902_117366985	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	776	Open in IMG/M
3300004463\|Ga0063356_103826107	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	648	Open in IMG/M
3300004479\|Ga0062595_100792152	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300004643\|Ga0062591_100747126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300005344\|Ga0070661_100028326	All Organisms → cellular organisms → Bacteria	4040	Open in IMG/M
3300005406\|Ga0070703_10028456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1671	Open in IMG/M
3300005438\|Ga0070701_10552800	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	755	Open in IMG/M
3300005444\|Ga0070694_100705273	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005455\|Ga0070663_100071367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2527	Open in IMG/M
3300005467\|Ga0070706_101852624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter → Ilumatobacter sp.	548	Open in IMG/M
3300005471\|Ga0070698_100961475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter → Ilumatobacter sp.	801	Open in IMG/M
3300005577\|Ga0068857_101062591	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	781	Open in IMG/M
3300005713\|Ga0066905_100676113	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300006049\|Ga0075417_10204523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300006049\|Ga0075417_10273889	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006058\|Ga0075432_10001503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7616	Open in IMG/M
3300006196\|Ga0075422_10000602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9496	Open in IMG/M
3300006196\|Ga0075422_10307471	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006577\|Ga0074050_11654985	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	692	Open in IMG/M
3300006581\|Ga0074048_12682392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1652	Open in IMG/M
3300006581\|Ga0074048_13232546	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006844\|Ga0075428_100281428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1789	Open in IMG/M
3300006845\|Ga0075421_100637310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter → Ilumatobacter sp.	1247	Open in IMG/M
3300006845\|Ga0075421_101133697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300006845\|Ga0075421_102590100	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	527	Open in IMG/M
3300006847\|Ga0075431_101200303	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	721	Open in IMG/M
3300006847\|Ga0075431_101326572	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300006852\|Ga0075433_10335976	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1335	Open in IMG/M
3300006853\|Ga0075420_100121950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2295	Open in IMG/M
3300006880\|Ga0075429_101069872	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300006904\|Ga0075424_100007719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10463	Open in IMG/M
3300007076\|Ga0075435_101176968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	671	Open in IMG/M
3300009094\|Ga0111539_11356855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300009148\|Ga0105243_10349490	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1357	Open in IMG/M
3300009156\|Ga0111538_11828148	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300009157\|Ga0105092_10017262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3799	Open in IMG/M
3300009168\|Ga0105104_10482655	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	696	Open in IMG/M
3300009814\|Ga0105082_1015034	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1134	Open in IMG/M
3300009815\|Ga0105070_1032129	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	942	Open in IMG/M
3300009817\|Ga0105062_1006601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1727	Open in IMG/M
3300009823\|Ga0105078_1032843	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	641	Open in IMG/M
3300010047\|Ga0126382_10928044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	756	Open in IMG/M
3300011412\|Ga0137424_1079517	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	651	Open in IMG/M
3300012355\|Ga0137369_11045197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	538	Open in IMG/M
3300012896\|Ga0157303_10322609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	502	Open in IMG/M
3300012948\|Ga0126375_10514027	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	896	Open in IMG/M
3300013308\|Ga0157375_11488714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → unclassified Ilumatobacter → Ilumatobacter sp.	799	Open in IMG/M
3300015200\|Ga0173480_10663179	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	649	Open in IMG/M
3300015371\|Ga0132258_11497518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1704	Open in IMG/M
3300015372\|Ga0132256_102338423	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	638	Open in IMG/M
3300017965\|Ga0190266_10210124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	939	Open in IMG/M
3300017997\|Ga0184610_1279239	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	552	Open in IMG/M
3300018031\|Ga0184634_10188101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300018056\|Ga0184623_10238374	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300018067\|Ga0184611_1119177	Not Available	925	Open in IMG/M
3300018072\|Ga0184635_10001494	All Organisms → cellular organisms → Bacteria	6826	Open in IMG/M
3300018072\|Ga0184635_10243360	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300018074\|Ga0184640_10362330	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018076\|Ga0184609_10156200	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1052	Open in IMG/M
3300018076\|Ga0184609_10335574	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	706	Open in IMG/M
3300018078\|Ga0184612_10204631	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300018084\|Ga0184629_10604614	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	559	Open in IMG/M
3300018469\|Ga0190270_12536816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300019259\|Ga0184646_1237752	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300022694\|Ga0222623_10259845	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	669	Open in IMG/M
3300025925\|Ga0207650_10261354	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1404	Open in IMG/M
3300026067\|Ga0207678_10095309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2543	Open in IMG/M
3300026116\|Ga0207674_11178307	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300027163\|Ga0209878_1045974	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300027577\|Ga0209874_1058179	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	987	Open in IMG/M
3300027873\|Ga0209814_10262255	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300027909\|Ga0209382_11946582	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027961\|Ga0209853_1019606	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300028711\|Ga0307293_10014539	All Organisms → cellular organisms → Bacteria	2249	Open in IMG/M
3300028744\|Ga0307318_10194425	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300028793\|Ga0307299_10005488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4398	Open in IMG/M
3300028803\|Ga0307281_10134606	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	857	Open in IMG/M
3300028811\|Ga0307292_10274386	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300028814\|Ga0307302_10361901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	716	Open in IMG/M
3300028814\|Ga0307302_10417067	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	664	Open in IMG/M
3300028819\|Ga0307296_10099927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1554	Open in IMG/M
3300028819\|Ga0307296_10162777	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1207	Open in IMG/M
3300028819\|Ga0307296_10521383	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	650	Open in IMG/M
3300028828\|Ga0307312_10898825	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	587	Open in IMG/M
3300030336\|Ga0247826_10247805	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300030336\|Ga0247826_11044838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300030336\|Ga0247826_11383784	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	568	Open in IMG/M
3300030606\|Ga0299906_10315987	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1218	Open in IMG/M
3300030619\|Ga0268386_10873093	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	566	Open in IMG/M
3300031226\|Ga0307497_10527451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300031908\|Ga0310900_10977424	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031949\|Ga0214473_12297445	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	517	Open in IMG/M
3300031965\|Ga0326597_11600140	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	621	Open in IMG/M
3300032179\|Ga0310889_10259881	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300032211\|Ga0310896_10878982	Not Available	518	Open in IMG/M
3300033550\|Ga0247829_11234373	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	619	Open in IMG/M
3300034176\|Ga0364931_0039201	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	1412	Open in IMG/M
3300034354\|Ga0364943_0336403	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.90%
Host-Associated	Host-Associated	30.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.37%
Plants	Host-Associated → Plants	30.10%
Aquatic	Environmental → Aquatic	15.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.21%
Sediment	Environmental → Aquatic → Sediment	12.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.88%
Freshwater	Environmental → Aquatic → Freshwater	2.91%
Floodplain	Environmental → Terrestrial → Floodplain	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.62%
Sand	Environmental → Terrestrial → Soil → Sand	6.80%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00397180	2088090015	Soil	AIDWSIRRYREAGLAGLPDLEVYLHRSHDACNGGIGLYHGGRIDLCTEDSSDPYRRKFALHEMAHAWIESNVDTAVLDRFMDVRGIAAWNDRSFDWKDRGTEQAAEIVTWGLGEGQIAPLLPEATDAPTLARLYELLTGREPITPAAR
ICChiseqgaiiFebDRAFT_139471982	3300000363	Soil	GGLEGMPPLEVYLHGSRDSCNGNLGLYLAGRIDLCTKGLLQPYGRHFALHEMAHAWTEANGSRERLGRFMRIRGIATWNDRHLPWRERGAEQAAEIISWGLGEGEIQPVLPTPVDAETLASLYELLTGRAPITPAAAG*
JGI11643J12802_101213081	3300000890	Soil	KFALHEMAHAWIESNVDTAVIDRFMDVRGIAAWNDRSFDWKDRGTEQAAEIVTWGLGEGQIAPLLPEATDAPTLARLYELLTGREPITPAAR*
JGI10216J12902_1014286502	3300000956	Soil	KFALHEMAHGWIETNVDGAILDRFMDIRGIVAWNDRSYDWKRRGTEQAAEIVTWGIGDGEVSPLLPEAVDTPTLARLYELLTGREPITPAAR*
JGI10216J12902_1052954792	3300000956	Soil	KFALHEMAHGWIETNVGGAVLDRFMEVRGIAAWNDRSSDWKQRGTEQAAEIVTWGLGEGEIAPLLPEALDAPALGRLYELLTGREPITPAAR*
JGI10216J12902_1173669851	3300000956	Soil	LAGLPDLEVYLHRSHDACNGGIGLYHEGRIDLCTKDTSEPYQRKFALHEMAHAWTEANVDTAVLDRFMDIRGIAAWNDRSFDWKERGTEQAAEIVTWGLGEGQISPLLPEATDAPTLARLYELLTGREPITPAVR*
Ga0063356_1038261072	3300004463	Arabidopsis Thaliana Rhizosphere	MPSLDVYLHRSHEACNEGIGLYHAGRIDLCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMGIRGITHWNDRSDDWRDRGTEQAAEIITWGLGEGEIAPLLPETVDVRTLAGLYQLLTGREPITPAAR*
Ga0062595_1007921522	3300004479	Soil	WTEAHIESAILNRFMDIRGIAHWNDPSDDWKDRGTEQAAEVITWGVGEGEIAPLLPETVDVRTLAGLYELLTGREPITPAAR*
Ga0062591_1007471262	3300004643	Soil	WTEANVPGDVLRAFMQRQRVADWNDRSYPWKERGTEQAAEVVTWGLGEGEIAPLLPEVPDPRTLASLYEMLTGRAPITPAAA*
Ga0070661_1000283261	3300005344	Corn Rhizosphere	LEVYVHPSNRGCRDGIGYYLAGRIDLCTTASSEPYQRKFALHEMAHGWIETNVDGGVLDRFMRVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPQALDAPALARLYELLTGRDPITPATR*
Ga0070703_100284561	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GANAAEERAIDWSLRRYREAGLEGMPDLEVYVHRSHEGCRDGIGYYLAGRIDLCTAASSQPYQRKFALHEMAHGWIETNVDGGVLDRFMRVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPEALDAPALARLYELLTGRDPITPATR*
Ga0070701_105528002	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0070694_1007052732	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ERAIDWSIRRYREAGLEGMPDLEVYVHPSNRGCRDGIGYYLAGRIDLCTTASSEPYQRKFALHEMAHGWIETNVDGGVLDRFMRVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPVALDAPALARLYELLTGRDPITPATR*
Ga0070663_1000713673	3300005455	Corn Rhizosphere	RGCGDGIGYYLAGRIDLCTTASSEPYQRKFALHEMAHGWIETNVDGGVLDRFMRVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPEALDAPALARLYELLTGRDPITPATR
Ga0070706_1018526242	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RKFALHEMAHAWIESNVDTAVLERFMDVRGIAAWNDRSFEWKDRGTEQAAEIVTWGRGEGHIAPLLPEATDAPTLARLYELLTGREPITPAAR*
Ga0070698_1009614752	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GGRIDLCTEDSSDPYRRKFALHEMAHAWIESNVDTAVLERFMDVRGIAAWNDRSFEWKDRGTEQAAEIVTWGLGEGHIAPLLPEATDAPTLARLYELLTGREPITPAAR*
Ga0068857_1010625912	3300005577	Corn Rhizosphere	GRYHGGRIDLCTKDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQIAPLLPEATDAPTLARLYELLTGREPITPAAR*
Ga0066905_1006761131	3300005713	Tropical Forest Soil	SEPYQRKLALHEMAHAWTEANLPAEVLRAFMQRQRIVAWNDRSCPWKERGTEQAAEVITWGLGEGQIAPLLPEVPDAATLASLYEMLTGRAPITPATA*
Ga0075417_102045231	3300006049	Populus Rhizosphere	LHEMAHAWIATNVGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA*
Ga0075417_102738892	3300006049	Populus Rhizosphere	PSLDVYLHRSHEACNEGIGLYHAGRIELCTKTSSEPYQRKFALHEMAHARTESNVEPAILDRFMQVRGIATWNDRSYDWKERGTEQAAEIVTWGLGEGEIAPLLPETVDVRTLAGLYELLTGREPITPAAR*
Ga0075432_100015031	3300006058	Populus Rhizosphere	YLHRSHEACNEGIGLYHAGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075422_100006021	3300006196	Populus Rhizosphere	EGIGLYHAGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075422_103074712	3300006196	Populus Rhizosphere	MAHAWIATNIGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA*
Ga0074050_116549851	3300006577	Soil	RLEGMPDLDVYLHRADEPCDGGLGLYFAGRIDLCTKESSEPYQRKFALHEMAHGWIEANVSTEVLQRFMDLRGIAAWNDRSFDWKERGTEQAAEIITWGLGEGEIAPLLPEITDPETLTSLYRLLTDLEPITPAA*
Ga0074048_126823922	3300006581	Soil	AAEERAIDWSIRRYREAGLEGMPDLDVYLHRADEPCDGGLGLYFAGRIDLCTKESSEPYQRKFALHEMAHGWIEANVSTEVLQRFMDLRGIAAWNDRSFDWKERGTEQAAEIITWGLGEGEIAPLLPEITDPETLTSLYRLLTDLEPITPAA*
Ga0074048_132325462	3300006581	Soil	ERAIDWSIRRYREAGLAGMPDLEIHLHRSHDPCNGGLGLYVAGRIDLCTAASSEPYQRKFALHEMAHGWIETNVDGQVLDRFMDIRGITAWNDRSYDWKQRGTEQAAEIVTWGLGEGEISPLLPEAVDGPTLARLYELITGREPITPAAR*
Ga0075428_1002814281	3300006844	Populus Rhizosphere	RYGEAGLRNMPPLDIHMYRDHGPCNGGLGLANQGRIELCTKSSSEPYQRRFALHEMAHAWIATNVGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA*
Ga0075421_1006373102	3300006845	Populus Rhizosphere	SSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075421_1011336971	3300006845	Populus Rhizosphere	MYRDHGPCNGGLGLANQGRIELCTKSSSEPYQRRFALHEMAHAWIATNVGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA*
Ga0075421_1025901001	3300006845	Populus Rhizosphere	AEERTIDWALRRYRIAGLDEMPNLEVVLHRSDEGCNGGIGLYYSGRIDLCTKDASEPYQRKFALHEMAHAWTEANIDTQVLERFMDVRGIAAWNDRSFDWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTARDPVTPAAR*
Ga0075431_1012003031	3300006847	Populus Rhizosphere	DVYLHRSHEACNEGIGLYHAGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075431_1013265721	3300006847	Populus Rhizosphere	FALHEMAHAWIATNVGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA*
Ga0075433_103359761	3300006852	Populus Rhizosphere	LDVYLHRSHEACNEGIGLYHAGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075420_1001219503	3300006853	Populus Rhizosphere	AEELAVDWALHRYRLAGLEDMPSLDVYLHRSHEACNEGIGLYHAGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075429_1010698722	3300006880	Populus Rhizosphere	SERYQRKFALHEMAHAWTEANVDAQVLERFMDVRGIAAWNDRSFDWKERGTEQVAEIITWGLGEGEIAPLLPEVPDTETLASLYEMLTGRAPITPAAA*
Ga0075424_10000771912	3300006904	Populus Rhizosphere	GIGLYHAGRIELCTKTSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLAGLYELLTGREPITPAAR*
Ga0075435_1011769682	3300007076	Populus Rhizosphere	YGEAGLRNMPPLDIHMYRDHGPCNGGLGLANQGRIELCTKSSSQPYQRRFALHEMAHAWIATNVGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA*
Ga0111539_113568551	3300009094	Populus Rhizosphere	LHEMAHGWIEANVVGTVLDRFMQVRGIAAWNDRSFDWKQRGTEQAAEIVTWGLGEGEISPLLPQALDAPALARLYELLTGREPITPAAR*
Ga0105243_103494901	3300009148	Miscanthus Rhizosphere	LDVYLHRSHEACNEGIGLYHAGRIELCSKTSSEPYQRKFALHEMAHAWTEAQIKGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLARLYELLTGREPITPAAR*
Ga0111538_118281481	3300009156	Populus Rhizosphere	EPYQRKIALHEMSHAWTEANVPGDVLRAFMQRQRVADWNDRRYPWKERGTEQAAEVITWGLGEGEIAPLLPVVPDAKTLASLYEMLTGRTPITPAAA*
Ga0105092_100172621	3300009157	Freshwater Sediment	AWTEAKVDAEVLGRFMDVRGTAAWNDRSIVWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTGREPITPAA*
Ga0105104_104826552	3300009168	Freshwater Sediment	VQRGIGLYHGGRIDLCTEDSSEPYRRKFALHEIAHAWIESNVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIVTWGLGEGQISPLLPEATDAPTLARLYELLTGREPITPAAR*
Ga0105082_10150342	3300009814	Groundwater Sand	WAIRRYHTAGLDGMPNLEVVLHRSDEGCNGGIGLYYSGRIDLCTKDASEPYQRKFALHEMAHAWTEANVDAEVLGRFMDVRGIAAWNDRSFVWKERGTEQVAEIITWGLGEGEIAPLLPEITDRETLARLYRLLTARDPITPAAR*
Ga0105070_10321291	3300009815	Groundwater Sand	LDGMPNLEVALHRSDEACNGGIGLYYAGRIDLCTKDASEPYQRRFALHEMAHAWTEANVDAEVLGRFMDVRGIAAWNDRSFVWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTARDPITPAAR*
Ga0105062_10066013	3300009817	Groundwater Sand	LFFAGRIDLCTEGLLEPYARKFALHEMAHAWIEANLPDEQLVRFLRIRGIATWNDQRLPWKERGAEQAAEIITCGLGEGQISPLLPEATDAPTLARLYELLTGREPITPAAR*
Ga0105078_10328431	3300009823	Groundwater Sand	HDACNGGIGLYHGGRIELCTKDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDIRAIAAWNDRSLDWKERGTEQAAEIITWGLGEGQISPLLPEATDAPTLARLYELLTGREPITPAAR*
Ga0126382_109280442	3300010047	Tropical Forest Soil	LSYEGRIELCTKDSSEAYQRKFALHEMAHSWIATNVGGDVLAAFMQRQGVEEWNDRSFPWKERGTEQAAEVITWGLGEGGIAPLLPETLDPKTLTSLYEMLTGRAPITPAAA*
Ga0137424_10795171	3300011412	Soil	IDLCTKASSEPYQRKHALHEMAHAWTEANIDTATLERFMDIRGIATWNDRSFDWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTARDPITPAAR*
Ga0137369_110451971	3300012355	Vadose Zone Soil	REAGLEGMPDLEVYVHRSNEGCGDGIGYYLQGRIDLCTTASSEPYQRKFALHEMAHGWIETNVDGEVLNRFMRIRGIATWKDRSFDWKDRGTEQAAEIVTWGLGEGEIAPLLPDALDAPALARLYELLTGREPITPAAR*
Ga0157303_103226091	3300012896	Soil	HMYRDHGPCNGGLGLANQGRIELCTKSSSEPYQRRFALHEMAHAWIATNVGGDVLVTFMQRQGIDGWNDRTAPWKERGTEQAAEVITWGLGEGEIAPLLPEPLDPATLASLYEMLTGRTPITRAAD*
Ga0126375_105140272	3300012948	Tropical Forest Soil	PPLEIYVHRSHDDCDGGLGLYFAGRVDLCTKDSSEPYQRKFALHEAAHAWVEANVPREILRTFMQRQQVVAWNDRSLPWKERGTEQAAEIITWGLDEGEIAPLLPEVPPTATLASLYEMLTGRSPHHPPAA*
Ga0157375_114887142	3300013308	Miscanthus Rhizosphere	SSEPYQRKFALHEMAHAWTEAHIEGAILNRFMEIRGIAHWNDRSEDWKDRGTEQAAEIITWGLGEGEIVPLLPEAVDVRTLARLYELLTGREPITPAAR*
Ga0173480_106631792	3300015200	Soil	GEAGLENLPPLDVRLYRDHGPCNGGLGLSFHGRIELCTKGSSEPYQRKFALHEMAHSWIDANVGGDVLVTFMQRQGIDGWNDRTAPWKERGTEQAAEVITWGLGEGEIAPLLPEPLDPATLASLYEMLTGRTPITPAAD*
Ga0132258_114975183	3300015371	Arabidopsis Rhizosphere	AVDWALHRYRLAGLEDMPSLDVYLHRSHEACNGGIGLYHAGRIELCTKNSSEPYQRKFALHEMAHAWTEAHIEGAILNRFMGIRGITHWNDRSDDWKDRGTEQAAEIITWGLGEGEIAPLLPETVDVRTLAGLYQLLTGREPITPAAR*
Ga0132256_1023384231	3300015372	Arabidopsis Rhizosphere	LEVHLHRSHDDCQGGLGLYFAGGIELCTKDSSEPYQRKIALHEMAHAWTETNVPGDVLRAFMQRQRVADWNDRSYPWKERGTEQAAEVITWGLGEGEIAPLLPVVPDAKTLASLYEMLTGRTPITPAAA*
Ga0190266_102101242	3300017965	Soil	CTEDSSEPYRRKFALHEMAHAWIESNVDTAVLERFMDVRGIAAWNDRSFERKDRGTEQAAEIVTWGLGEGEIAPLLPEATDASTLARLYELLTGREPITPAAR
Ga0184610_12792391	3300017997	Groundwater Sediment	MAHAWSEANVDAEVLERFMDVRGIAAWNDRSFDWKERGTEQVAEIVTWGLGEGEIAPLLPEITDPETLARLYRLLTARDPITPAAR
Ga0184634_101881011	3300018031	Groundwater Sediment	GCNGGLGLYHAGRIDLCTATSSEPYQRKFALHEMAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKQRGTEQAAEIVTWGLGEGEIAPLLSTRVDAETLASLYVLLTGHAPITLAAAG
Ga0184623_102383741	3300018056	Groundwater Sediment	LHEMAHAWTEANVDAEVLERFMDVRGIAAWNDRSFDWKERGTEQVAEIITWGLGEGEIAPLLPESTDPETLARLYRLLTARDPITPAAR
Ga0184611_11191771	3300018067	Groundwater Sediment	MAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKQRGTEQAAEIVTWGLGEGEIAPLLSTRVDAETLASLYVLLTGHAPI
Ga0184635_100014941	3300018072	Groundwater Sediment	FALHEMAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKQRGTEQAAEIVTWGLGEGEIAPLLSTRVDAETLASLYVLLTGHAPITLAAAG
Ga0184635_102433602	3300018072	Groundwater Sediment	FALHEMAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKHRGTEQAAEIVTWGLGEGEISPLLPEAVDGPTLARLYELITGREPITPAAS
Ga0184640_103623301	3300018074	Groundwater Sediment	RKFALHEMAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKQRGTEQAAEIVTWGLGEGEIAPLLSTRVDAETLASLYVLLTGHAPITLAAAG
Ga0184609_101562002	3300018076	Groundwater Sediment	MAHAWSEANVDAEVLERFMDVRGIAAWNDRSFDWKQRGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTAREPITPAAR
Ga0184609_103355741	3300018076	Groundwater Sediment	DWAIRRYRIAGLDAMPNLEVFLHRSDEACNGGIGLYNSGRIDLCTKESSEPYQRKFALHEMAHAWTEANVDATALDRFMDVRGIASWNDRSFDWKERGTEQVAEIISWGLGEGEIAPLLPEITGPETLARLYRLLTARDPITPAAR
Ga0184612_102046311	3300018078	Groundwater Sediment	PSALMRYKVDPRPEGGDMFMDVRGIASWNDRSFDWKERGTEQVAEIISWGLGEGEIAPLLPEITGPETLARLYRLLTARDPITPAAR
Ga0184629_106046142	3300018084	Groundwater Sediment	CRYREAGLDGMPSLEVYLHRSQDQCNGGIGYYLAGQIDLCTKASSEPYRRKFALHEMAHAWTETNVDPAVLERFMDVRGIAAWNDKSFDWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTARDPITPAAR
Ga0190270_125368162	3300018469	Soil	HEMAHAWTEANIDAEVLGRFMDLRGIAAWNDRSFDWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTDLEPISPAA
Ga0184646_12377521	3300019259	Groundwater Sediment	EMAHAWTEANVDGEVLDRFMDVRGIASWNDRSFDWKERGTEQVAEIITWGLGEGDIAPLLPEITDPETLARLYRLLTARDPITPAAR
Ga0222623_102598451	3300022694	Groundwater Sediment	HDACNGSIGLYHGGRIDLCTEDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQISPLLPEATDAPTLVRLYELLTGREPITPAA
Ga0207650_102613542	3300025925	Switchgrass Rhizosphere	GLYHGGRIDLCTEDSSDPYRRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQIAPLLPEATDAPTLARLYELLTGREPITPAAR
Ga0207678_100953091	3300026067	Corn Rhizosphere	YVHQSNRGCGDGIGYYLAGRIDLCTTASSEPYQRKFALHEMAHGWIETNVDGGVLDRFMRVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPEALDAPALARLYELLTGRDPITPATR
Ga0207674_111783072	3300026116	Corn Rhizosphere	SEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQIAPLLPEATDAPTLARLYELLTGREPITPAAR
Ga0209878_10459741	3300027163	Groundwater Sand	QRKFALHEMAHAWTEANVDTAVLERFMDIRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQISPLLPEATDAPTLARLYELLTGREPITPAAR
Ga0209874_10581792	3300027577	Groundwater Sand	ASEPYQRKFALHEMAHAWTEANVDGEVLDRFMDVRGIASWNDRSFDWKGRGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTARDPITPAAR
Ga0209814_102622552	3300027873	Populus Rhizosphere	YQRRFALHEMAHAWIATNVGGDVLAAFMQRQRVTDWNDRSFPWKERGTEQAAEVITWGLGEGEIAPLLPEVPDAQTLASLYEMLTGRAPITPAAA
Ga0209382_119465822	3300027909	Populus Rhizosphere	AWTEANVDPQVLERFMDVRGIAAWNDRSFDWKERGTEQVAEIITWGLGEGAIAPLLPGITDAETLARLYRLLTARDPITPAAR
Ga0209853_10196063	3300027961	Groundwater Sand	MPNLEVVLHRSDEGCNGGIGLYYSGRIDLCTKDASEPYQRKFALHEMAHAWTEANVDAEVLGRFMDVRGIAAWNDRSFVWKERGTEQVAEIITWGLGEGEIAPLLPEITDPETLARLYRLLTARDPITPAAR
Ga0307293_100145393	3300028711	Soil	HGWRIDLCTEDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDIRGIAAWNDRSLDWKERGTEQAAEILTWGLGEGQISPLLPEATDAPSLARLYELLTGREPITPAAR
Ga0307318_101944251	3300028744	Soil	KFALHEMAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKQRGTEQAAEIVTWGLGEGEISPLLPEAVRAPNLARLYELLTGREPITPAAR
Ga0307299_100054881	3300028793	Soil	WSIRRYSEAGLAGLPDLEVYLHRSHDACNGSIGLYHGGRIDLCTEDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQISPLLPEATDAPTLVRLYELLTGREPITPAAR
Ga0307281_101346062	3300028803	Soil	AAEELVIDWSIRRYREAGLDGMPDLEVYLHRSQDQCNGGIGYYLAGRIDLCTKASSEPYQRKFALHEMAHGWIEANVDAATLDRFMGLRGIDAWNDRIADEWKDRGTEQAAEIVTWGLGEGEIAPLLPEVVDAPTLSRLYELLTGREPITPAAR
Ga0307292_102743861	3300028811	Soil	PYRRKFALHEMAHGWIETNVDGAVLDRFMDIRGIAAWNDRSYDWKHRGTEQAAEIVTWGLGEGEISPLLPEAVDGPTLARLYELITGREPITPAAS
Ga0307302_103619012	3300028814	Soil	RIDLCTEDSSDPYRRKFALHEMAHAWIESNVDTAVLERFIDVRGIAAWNDRSLDWKERGTEQAAEIVTWGLGEGEISPILPEAVDAPTLARLYELLTGREPITPAAR
Ga0307302_104170672	3300028814	Soil	IDLCTKDASEPYQRKFALHEMAHAWTEANVDAEVLVRFMDVRGIAAWNDRSFDWKERGTEQVAEIITSGLGAGEIAPLLPDQITDPIADRELADLFELLTGRRPITQID
Ga0307296_100999272	3300028819	Soil	GWIETNVDPVILDRFMDIRRIAAWNDRSFDWKDRGTEQAAEIVTWGLGEGEIAPLLPEKVDAPTLSRLYELLTGREPITPAA
Ga0307296_101627771	3300028819	Soil	DACNGSIGLYHGGRIDLCTEDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQISPLLPEATDAPTLVRLYELLTGREPITPAAR
Ga0307296_105213832	3300028819	Soil	RAIDWSIRRYREAGLARMPDLEVYLHRSHDACNGGIGLYHAGRIDLCTAASSEPYQRKFALHEMAHGWIEANVDGAVLDRFMEIRGIAAWNDRSYDWKQRGTEQAAEIVTWGLGEGEISPLLPDTTDSPTLARLYELLTGRTPITPAAR
Ga0307312_108988251	3300028828	Soil	GRIDLCTEDSSEPYQRKFALHEMAHAWTEANVDTAVLERFMDVRGIAAWNDRSLDWKERGTEQAAEIITWGLGEGQISPLLPEATEAPTLVRLYELLTGREPITPAAR
Ga0247826_102478051	3300030336	Soil	LEVYVHRSHEGCRDGIGYYLAGRIDLCTAASSEPYQRKFALHEMAHGWIETNVDGAVLDRFMQVRGIAAWNDRTFDWKQRGTEQAAEIVTWGLGEGEISPLLPEALDAPALARLYELLTGREPITPAAR
Ga0247826_110448382	3300030336	Soil	LEVYVHRSHEGCRDGIGYYLAGRIDLCTRASSEPYQRKFALHEMAHGWIETNVDGAVLDRFLQVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPEALDAPTLGRLYELLTGREPITPAAG
Ga0247826_113837841	3300030336	Soil	EPYARKFALHEMAHAWTDANLPDEVLDRFLRIRGIATWNDQRVPWRERGAEQAAEIITWGLGEGEIAPLLPTPVDAETLASLYSLLTGRAPITLAAA
Ga0299906_103159872	3300030606	Soil	AVQERAINWSIRRYREAGLDGMPDIEVYLHRSHEECNGGLGLYHAGRIDLCTATSSEPYQRKFALHEMAHGWIETNVDGVVLDRFMDIRGIAAWNDRSYDWKQRGAEQAAEIITWGLGEGEIAPLLPTSVDPETLASLYVLLTGHAPITLAAAG
Ga0268386_108730932	3300030619	Soil	GGLGLYHAGRIDLCTKDSSEPYQRKFALHEVAHGWVESNVDPEVLDRFMDIRGVAAWSDRNFAWKERGTEQAAEIITWGLGEGEIAPLLPETTDTETLARLYRLLTARDPITPAAS
Ga0307497_105274511	3300031226	Soil	ALHEMAHGWIETNVDGAVLDRFMQVRGIVTWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPEALDAPALARLYELLTGRQPITPAAR
Ga0310900_109774241	3300031908	Soil	HRSQEGCRDGIGYYLDGRIDLCTAASSEPYQRKFALHEMAHGWIETNVDGAVLDRFLQVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPDALDAPALGRLYELLTGRGPITPAAR
Ga0214473_122974452	3300031949	Soil	LDVYLHSSRDACRGALGRYKAGRIDLCTKDSSEPYAKKFALHEMAHAWVESNLDPTGMERFMDVRGLSIWNDARYPWKERGSEQVAEIITWGLGEGEVAPLLPEATDAATLAALFEMLTGRPPINPNAQI
Ga0326597_116001401	3300031965	Soil	RGLYHAGRIDLCTATSSEPYQRKFALHEMAHGWIETNVDGVVLDRFMDIRGIAAWNDRSYDWKQRGAEQAAEIITWGLGEGEIAPLLPTSVDPETLASLYVLLTGHAPITLAAAG
Ga0310889_102598812	3300032179	Soil	GRIDLCTRASSEPYQRKFALHEMAHGWIETNVDDAVLDRFLQVRGIATWNDRSFDWKQRGTEQAAEIVTWGLGEGAIAPLLPEALDAPTLGRLYELLTGREPITPAAG
Ga0310896_108789822	3300032211	Soil	RRYREAGLEGMPDLEVYVHPSNRGCRDGIGYYLAGRIDLCTTASSEPYQRKFALHEMAHGWIETNVDGAVLDRFMRDRGIAAWNDPSFDWKQRGTEQAAEIVTWGLGEGEIAPLLPEIVDASTLTRMYELLTGREPITPAAR
Ga0247829_112343731	3300033550	Soil	GLEGLPPLEVVLHGSRTPCDGYLGLYLAGRIDLCTEGLLEPYARKFALHEMAHAWTEANLPDEVLDRFLRIRGIATWNDQRLPWKERGAEQAAEIITWGLGEGEIAPLLRTPVDAETLASLYVLLTGRAPITLAAA
Ga0364931_0039201_1051_1410	3300034176	Sediment	MPNLEVFLHRSDEGCNGGIGLYYSGRIDLCTKDASEPYQRKFALHEMAHAWTEANVDAEVLERFMDVRGISAWNDRSFDWKERGTEQVAEIVAWGLGEGEIAPLLPEITDPETLARLYRL
Ga0364943_0336403_250_576	3300034354	Sediment	RIDLCTKASSEPYQRKFALHEMAHGWIEANVDAAILDRFMDLRGIDAWNDRIADDWKDRGTEQAAEIVTWGLGEGEIAPLLPEVVDAPTLSRLYELLTGREPITPAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences