NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099519

Metagenome / Metatranscriptome Family F099519

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099519
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 161 residues
Representative Sequence SAVLVMLLVVYSCVLTIGLPVLERARPTAAIAENLRPQLAPDDRVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTNTAR
Number of Associated Samples 84
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 20.39 %
% of genes from short scaffolds (< 2000 bps) 21.36 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (78.641 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.417 % of family members)
Environment Ontology (ENVO) Unclassified
(23.301 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(33.981 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 36.84%    β-sheet: 23.98%    Coil/Unstructured: 39.18%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF07731Cu-oxidase_2 1.94
PF13302Acetyltransf_3 0.97
PF01314AFOR_C 0.97
PF00111Fer2 0.97
PF01799Fer2_2 0.97
PF07732Cu-oxidase_3 0.97
PF13425O-antigen_lig 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 2.91
COG2414Aldehyde:ferredoxin oxidoreductaseEnergy production and conversion [C] 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.64 %
All OrganismsrootAll Organisms21.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000858|JGI10213J12805_10128306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1091Open in IMG/M
3300005293|Ga0065715_10431884All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium841Open in IMG/M
3300005333|Ga0070677_10207189All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium950Open in IMG/M
3300006196|Ga0075422_10124934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1008Open in IMG/M
3300006894|Ga0079215_10282076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300009053|Ga0105095_10089081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1670Open in IMG/M
3300011412|Ga0137424_1017323All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1059Open in IMG/M
3300011422|Ga0137425_1056915All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium894Open in IMG/M
3300018067|Ga0184611_1162469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium792Open in IMG/M
3300018422|Ga0190265_11341749All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium831Open in IMG/M
3300018429|Ga0190272_10700583All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium912Open in IMG/M
3300018429|Ga0190272_11436619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300020020|Ga0193738_1068290All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1051Open in IMG/M
3300025893|Ga0207682_10132555All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1113Open in IMG/M
3300027513|Ga0208685_1044045All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium970Open in IMG/M
3300027533|Ga0208185_1040219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1138Open in IMG/M
3300027723|Ga0209703_1110669All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1049Open in IMG/M
3300027731|Ga0209592_1174254All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium764Open in IMG/M
3300031562|Ga0310886_10426436All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300031852|Ga0307410_11162174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300032005|Ga0307411_10897976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300034257|Ga0370495_0171878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil13.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment5.83%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.83%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.91%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.94%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.94%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.94%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.97%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.97%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.97%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009527Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold CreekEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300011430Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2EnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022309Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027364Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027723Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034760Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMSEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10213J12805_1012830613300000858SoilARPTAAIAEHLRPQLAAEDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLDKKGAYILMLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
JGI10216J12902_10508892723300000956SoilIARFKVDRYLYPAAPACCLLAARAWMSVSVLRPNVAAVRDTVYTRWSVIALGIILVAVGGLSAFSIFDLGLDLPPAAVVIPVSLAAGGLVLESTILRRKSVSPAVFAAVVAMLLVIYASALTIGIPVLERARPTEAVAESLRPKLAAGDEVALYRLEKWRFSLRYYLERPLGRLQGPEDVEQFISSKGNYILMLDEDFNRLRDSGINLRAVSTRPAVTGTTGKGLRRQKWGALVVATSDDTPRTTETVR*
Ga0062589_10102823713300004156SoilRKAVSPLVFSAVLVMLLVVYSCVMMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKRGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0062592_10123418013300004480SoilTTILRRKAVSPWVFSAVLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKRGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0068993_1040108513300005183Natural And Restored WetlandsRVVSPTLFTSLVIALLVMYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLTNKGGYILMLDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0065704_1024975423300005289Switchgrass RhizosphereAIVIPISLAAGGAALAVVTFRQRVVSPTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0065715_1043188423300005293Miscanthus RhizosphereVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKRSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRHQKWGALVVVTSDDTPRTTNTTR*
Ga0065707_1068519923300005295Switchgrass RhizospherePKLAANEQVGLYRLEKWRFSLRYYLERPVSRLQSEGEVREFLNTKGGYVLMLDEDFNRLRKDGINLRAVAERPAVTGTTGKGLRRQKWGSLVVATSDDTPRTVEKPR*
Ga0070677_1020718913300005333Miscanthus RhizosphereGLSLFDLGLELPRAALLIPAGLAAGGVVLLATILGRKSASPVMFSAVVVMLLVVYSCVLTIGLPLLERARPTAAVAEHLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILLSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRHQKWGALVVATSDDTPRTTNTAR*
Ga0070675_10076760813300005354Miscanthus RhizospherePLLERARPTATIAEDLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPADVKEFLHKKGSYILMSDEDLARLRHDGVNLRAVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0070673_10237320113300005364Switchgrass RhizosphereFSLFDLGFDLPPAAMLIPVSMAAGGAVLGAAVVRRRAVTPSVFGAVLTMLLVIYGCVLTMGLPVLERARPTEALADSLRPRLSERDQVALYRLEKWRFSLRYYLQRPLGTLERPDDVRQFIAGNGGYILMLDEDFARLRSVGINLRAVSERPAVTGTTGKGLRRQKW
Ga0070704_10154763113300005549Corn, Switchgrass And Miscanthus RhizosphereAAGGAALAVVTFRQRVVSPTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0068859_10182354313300005617Switchgrass RhizosphereIVIPISLAAGGAALAVVTFRQRVVSPTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLTNRGGYILMLDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0068861_10017858313300005719Switchgrass RhizosphereVTFRQRVVSPTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0075422_1012493433300006196Populus RhizosphereVLTIGLPLLEQARPTAAIAETLRPQLAADDQVGLYRLEKWRFSLRYYLERPLSKLQEPSDVKEFLDKKGGYILMSDEELARLRNDGVHLRAVSERPAVTGTTGRGFRRQKWGSLVVATSDDTPRTTNTAR*
Ga0075420_10012434113300006853Populus RhizosphereFSAVVVMLLVVYSCVLTIGLPLLEQARPTAAIAETLRPQLAADDQVGLYRLEKWRFSLRYYLERPLSKLQEPSDVKEFLDKKGGYILMSDEELARLRNDGVHLRAVSERPAVTGTTGRGFRRQKWGSLVVATSDDTPRTTNTAR*
Ga0079217_1056174913300006876Agricultural SoilAVARDNACTRWSAVTLGGILVLAGVVSGFTLFDLGLELPRAALLIPISLAAGGVVLAMTILRRRAVSPSLFGAVIVMLLVIYGSVATIGLPVLERARPTAALADSLRPKLAADDQVALYRLEKWRFSLRYYLERPLGRLQEPDDVRKFLTDKGGYILMLDEDYARLRNDGINLRSVAERRAVTGTTGTGLRKQKWGALVVATSDDTPRR*
Ga0079217_1098526913300006876Agricultural SoilVADSLRPKLNESDQIGLYRLEKWRFSLRYYLERPIDRLQDPGDVKEFLTNKGGYILMLDEDFARLRNDGVNLRAVSKRPAVTGTAGKGLRRQKWGALIVATSDDTPRTTEKP*
Ga0079217_1102594813300006876Agricultural SoilGLELPRAAMVIPASLVAGGLMLEAAIVRRKAVSPQLFGAMVVMLLVVYGSVLAIGIPLLERARPTAAIAENLRPKLAAGDRIGLYRLEKWRFSLRYYLERPLGRLQDPEDVRKFLTSKGDYILMLDEDFARLREDGIRLRAVSERAAVTGTTGKGLRRQKWGALVVATSDDTPRTTDTPQPR*
Ga0075429_10022432413300006880Populus RhizospherePLLEQARPTAAIAETLRPQLAADDQVGLYRLEKWRFSLRYYLERPLSKLQEPSDVKEFLDKKGGYILMSDEELARLRNDGVHLRAVSERPAVTGTTGRGFRRQKWGSLVVATSDDTPRTTNTAR*
Ga0079215_1028207613300006894Agricultural SoilRAALMIPISLAAAGLLMEATILRRRAVSPTLFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADTLRPKLDADDQVALYRLEKWRFSLRYYLERPLGRLQEPADVRRFLTNNGGYILMLDEDFARLRRDGINLKSVAERPAVTGTTGKGLRKQKWGALVVATSDDTPRR*
Ga0079215_1079563513300006894Agricultural SoilDLAAARDNIFARWSVVMLGGILVIAAAVSGFSLFDLGLELPQAALLIPLSLAVGGVVLEATLLRRKAVSPFAFGAVLVMLLVIYACVVAIGLPVLERARPSEAVADNLRPNLSADDQVALYRLEKWRFSLRYYLERPLDRLEEPADVRRFLTGKGNYILMLDEDFARLRKDGINLRAVSEQPAVTGTIGKGLRRQKWGSLVVAISDDTPRTTDTPRSR*
Ga0079215_1081164523300006894Agricultural SoilIPVTLAAGGLMLEATILRRKAVSPFLFGSVLVTLLVIYGCVLAIGVPVLERARPTEAVADSLRPKLSADDEVALYRLEKWRFSLRYYLERPLGRLQNPEDVRKFLTSKGDYILMLDEDFARLREDGIKLRAVSERAAVTGTTGKGLRRQKWGALVVATSDDTPRTTDTPQPR*
Ga0079218_1072063113300007004Agricultural SoilGIVSGVTLFDLGLELPRAALMIPISLAAAGVLMEATILRRRVVSPTLFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADTLRPKLDADDQVALYRLEKWRFSLRYYLERPLGRLQEPADVRRFLTNNGGYILMLDEDFARLRRDGINLKSVAERPAVTGTTGKGLRKQKWGALVVATSDDTPRK*
Ga0079218_1143912313300007004Agricultural SoilLGAILVAAGIVSGVTLFDLGLELPRAALMIPISLAAAGVLMEATILRRRVVSPTLFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADTLRPKLHADDQVALYRLEKWRFSLRYYLERPLGRLQEPADVRKFLTDNGGYILMLDEDFARLRRDGINLKSVAERPAVTGTTGKGLRKQKWGALVVATSDDTPRR*
Ga0079218_1196232223300007004Agricultural SoilGSVLMMLLVIYVCVLAIGVPVLERARPTEAVADSLRPKLSEDDRVGLYRLEKWRFSLRYYLERPLSRLQSPADVKAFLTGRGDYILLLDEDFARLREDGIKLRAVSERAAVTGTTGKGLRRQKWGALVVATSDDTPRAPDNPRAR*
Ga0079218_1207459223300007004Agricultural SoilDLPQAALLIPLSLAVGGVVLEATLLRRKAVSPFAFGAVLVMLLVIYACVVAIGLPVLERARPSEAVADNLRPNLSADDQVALYRLEKWRFSLRYYLERPLGRLEEPADVRKFLTGKGNYILMLDEDFARLRKDGINLRAVSEQPAVTGTIGKGLRRQKWGSLVVAISDDTPRTTDTPRSR
Ga0079218_1318814813300007004Agricultural SoilVAGGLMLEAAIVRRKAVSPQLFGAMVVMLLVVYGSVLALGIPLLERARPTAAIAENLRPKLAAGDRIGLYRLEKWRFSLRYYLERPVSRLQEPQDVREFLTTKGGYILLLDEDFARLRNTGVNLRAVSERPAVTGTTGRGLRRQKWGSLIVATSDDTPRTLER*
Ga0105095_1008908123300009053Freshwater SedimentMFRQRAVSPLLFGSLVTTLLVIYACVAAIGLPVLESTRPTAAVAESLRPKLAADEQIGLYRLEKWRFSLRYYLERPVSRLQSSTEVRDFLNTRRGYVLMLDEDFARLQHEGVRLRVVAERPAVTGTTGKGLRRQKWGALVVATSDDTPRTTER*
Ga0105106_1097409513300009078Freshwater SedimentRAVSPALFGWLVATLLVIYACVAAIGLPVLERTRPTAVVAETLRPRLAADERVGLYRLEKWRFSLRYYLERPVNRLQNPADVRDFLNTGGYVLMLNEDFARLRQDGIKLRAVAEQPAVTGTTGKGLRRQKWGALVVATSDDTPRTSESSR*
Ga0114129_1114682413300009147Populus RhizosphereSVYRSDLAVARDNIFARWSLATLAIILVAVGTVAGLSLFDLGLELPRAALFIPISLAAGGIVLGGTILRRQRVSPTLFGAVLVMLLVVYSCVLAIGLPLLERARPTAAVAETLRPKLAVGDKVALYRLEKWRFSLRYYLERPLGRLQDPADVRKFLNDKGVYILMLDEDFARLRSDGLNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTAETAR*
Ga0105100_1005192213300009166Freshwater SedimentIGLPVLESTRPTAAVAESLRPKLAADEQIGLYRLEKWRFSLRYYLERPVSRLQSSTEVRDFLNTRRGYVLMLDEDFARLQHEGVRLRVVAERPAVTGTTGKGLRRQKWGALVVATSDDTPRTTER*
Ga0105101_1011802033300009171Freshwater SedimentLFGSLVTTLLVIYACVAAIGLPVLESTRPTAAVAESLRPKLAADEQIGLYRLEKWRFSLRYYLERPVSRLQSSTEVRDFLNTRRGYVLMLDEDFALLQHEGVRLRVVAERPAVTGTTGKGLRRQKWGALVVATSDDTPRTTER*
Ga0114942_146072923300009527GroundwaterFGAVLGMLLVVYSCVMTIGLPLLERSRPTAAIAEHLRPQLAADDQLGLYRLEKWRFSLRYYLERPLSKLQDPSDVTEFLNKKGGYILILDEDFARLRNEGVNLRTVTERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTETGH*
Ga0126307_1105893713300009789Serpentine SoilARAWMSLSAVRSDVGAARTNTFTRWSVIALAGILVGAGAVSAFSLFDLGFDLPPAAMLIPISMAAGGGVLGAAVVRRGAVTPSVFGAVLTMLLVIYGCVLTMGLPVLERARPTEALADSLRPRLSERDQVALYRLEKWRFSLRYYLQRPLGTLQQPDDVRQFIAGSGGYILMLDEDFARLRSDGINLRAVSERPAVTGTTGKGLRRQKWGSLVVATSD
Ga0126313_1059094813300009840Serpentine SoilKGADGLILVAAGAVSAFSLFDLGFDLPAAAMLIPISMAAGGAVLGAAVVRRGAVTPSVFGAVVTMLLVIYGCVLTMGLPVLERARPTEALADSLRPRLSERDQVALYRLEKWRFSLRYYLQRPLGTLQQPDDVRQFIAGSGGYILMLDEDFARLRSDGINLRAVSERPAVTGTTGKGLRRQKWGSLVVATSDDTPRTQPTTR*
Ga0126304_1059674813300010037Serpentine SoilCLLAARAWMSLSADRSDAGAARNNTFTRWSVIALAGILVGAGAVSAFSLFDLGFDLPPAAMLIPISMAAGGAVLGAAVVRRGAVTPSVFGAVLTMLLVIYGCVLTMGLPVLERARPTEALADSLRPRLSERDQVALYRLEKWRFSLRYYLQRPLGTLQQPDDVRQFIAGSGGYILMLDEDFARLRSDGINLRAVSERPAVTGTTGKGLRRQKWGSLVVATSDDTPRTQPTTR*
Ga0126311_1057937913300010045Serpentine SoilILVGAGAVSAFSLFDLGFDLPPAAMLIPISMAAGGAVLGAAVVQRGAVTPSVFGAVLTMLLMIYGCVLTMGLPVLERARPTEALADSLRPRLSERDQVALYRLEKWRFSLRYYLQRPLGTLQQPDDVRQFIAGSGGYILMLDEDFARLRSDGINLRAVSERPAVTGTTGKGLRRQKWGSLVVATSDDTPRTQPTTR*
Ga0137424_101732313300011412SoilRRKAVSPLVFSAVLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0137425_105691523300011422SoilPLVFSAVLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0137423_118053613300011430SoilNLSAARDNTFVRWSVAALGAILVVSGIVASLALFDLGLDLPRAALLIPASLAAGGVVLETTILRRKAVSPLVFSAVLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVAGTTGRGLRRQKWGSLVVATSDDTPRT
Ga0157216_1039174013300012668Glacier Forefield SoilVTLGVILVAAGIVSGFTIFDLGLDLPRAALLIPISLAVSGVVMEATILRRRAVSATLFAAVVVMLLVIYGSVAALGLPVLERARPTEALADSLRPKLEADDHVALYRLEKWRFSLRYYLERPLGRLQEPADVRKFLTAKGGYILMLDEDFARLRQDGINLRSVAERPAVTGTTGTGLRKQKWG
Ga0157295_1008209813300012906SoilMSLSARRPDLSAARDNVFVRWSVAALGAILVAVGIIAGLSLFDLGLDLPRAALLIPASLAAGGVVLVAAILGRKTASPMVFSAVLVMLLVVYSCVLTIGLPVLERARPTAAIAENLRPQLAPDDRVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRHQKWGALVVVTSDDTPRTTNTAR*
Ga0157283_1019999323300012907SoilLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0157306_1025924513300012912SoilLLVIYACVAAIGLPLLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR*
Ga0157380_1272155913300014326Switchgrass RhizosphereTALLIPVSLAACGVMLEATILRHRAVSPILFGVVLTMLLGVYSSALAIGLPVLERARPTAAIAENLRPRLTADDQVGLYRLEKWRFSLRYYLDRPVSRLQEPSDVKDFLARKGGYILVLDEDLDRLRKDGVNLRTVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTRENP*
Ga0180090_108273513300014866SoilASLALFDLGLDLPRAALLVPASLAAGGVVLETTILRRKAVSPLVFSAVLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0173480_1110027613300015200SoilRWSVIALAGILVAAGAVSAFSLFDLGFDLPPAAMLIPVSMAAGGAVLGAAVVRRRAVTPSVFGAVLTMLLVIYGCVLTMGLPVLERARPTEALADSLRPRLSERDQVALYRLEKWRFSLRYYLQRPLGTLERPDDVRQFIAGNGGYILMLDEDFARLRSVGINLRAVSERPAVTGT
Ga0173480_1120934223300015200SoilAEHLRPQLAADDQIGLYRLEKWRFSLRYYLERPLSRLQEPADVKEFLDKKGGYILMLDEDLARLRGEGVRLKTVSERPAVTGTTGKGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0173478_1062166713300015201SoilGLSLFDLGLELPRGALLIPAGLAAGGVVLLATILGRKSASPVMFSAVVVMLLVVYSCVLTIGLPLLERARPTAAVAEHLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILLSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR*
Ga0132255_10241283623300015374Arabidopsis RhizosphereFTRWSIATLGLVLVAASVVAAYSLFDLGLELPPSALLIPLCLALGGCVVFVKVFRNRLASPLLFGSLVSLLLVIYASIAVIGLPVLERTRPTASVATGLRGKLAANEHVGLYRLDKWRFSLRYYLERPVNALETSGDVQKFLSTQRGYVLMFDEDFEKLKKDGVKLRAVAEQPAVTGTTGKGLRRQKWGALVVAISDDTPRTEEKSR*
Ga0180121_1039839513300017695Polar Desert SandLFAAPVVMLLVVYGIVVTIGLPVLERARPTAAVAEGLRSRLSEGDRVGLYRLEKWRFSLRYYLERPVSRLQHPADVQDFFNQSRNGYVLMLDEDFATLRGEGVNLRAVSERPAVTGTTGRGLRKQKWGALVVATLDDTPRTADPAVR
Ga0136617_1107819613300017789Polar Desert SandGFELPRAAVLMPLAVVAGGAALLIAIVRRRPVSPLLFAAPVVMLLVVYGIVVTIGLPVLERARPTAAVAEGLRSRLSEGDRVGLYRLEKWRFSLRYYLERPVSRLQHPADVQDFFNQSRNGYVLMLDEDFATLRGEGVNLRAVSERPAVTGTTGRGLRKQKWGALVVATLDDTPRTADPAVR
Ga0190266_1068858523300017965SoilAGGVVLVATILGRKTASPMVFSAVLVMLLVVYSCVLTIGLPVLERARPTAAIAENLRPRLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTNTAR
Ga0184634_1053696123300018031Groundwater SedimentPTAAIAEHLRPQLAADDQVGLYRLEKWRFSLRYYLERPLSRLQEPADVKEFLDKKGGYILMLDEDLARLRGEGVRLKTVSERPAVTGTTGKGLRRQKWGSLVVATSDDTPRTTNTAR
Ga0184611_116246913300018067Groundwater SedimentVYSCVLTIGLPVLERARPTAAIAENLRPQLAPDDKVGLYRLEKWRFSLRYYLERPLSRLQEPAEVKEFLHKKGSYILLSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR
Ga0190265_1104144513300018422SoilFKVDRYVYPAAPACCLLAARAWMSVSVIRPDLVAARDNVFARWSVVMLGGILVAAAAVSGFSLSDLGLDLPTAALLVPLSLAVGGGVVLEATILRRKAVSPAVFGAVLVMLLVIYACAVAIGLPLLERARPTEVVADSLRPNLSADDQVALYRLDKWRFSLRYYLERPLGRLEEPADVRKFLTGKGNYILMLDEDFARLRKDGINLRAVSEQPAVTGTVGKGLRRQKWGSLVVAISDDTPRTTDTPRSR
Ga0190265_1134174913300018422SoilTVVLVMLLLVYSVVLAIGMPLLERARPTAALAESLRPKLAAGDQIGLYRLEKWRFSLRYYLERPLSRLQNPSDVKEFLSKGGYILMLDEDLAHLRKDGMPLRSVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTKEKP
Ga0190272_1070058313300018429SoilPISLAAGGVVLEATILRRRAVSPTLFGAVVVMLLVIYGSVAAFGLPVLERARPTEAVADSLRPKLAADDQVALYRLEKWRFSLRYYLERPLGRLQHPDDVREFLTTSKGNYILMLDEDFAQLRKEGISLRAVAERPAVIGTTGKGLRRQKWGALVVATSDDTPRIMEKK
Ga0190272_1143661913300018429SoilIGLYRLEKWRFSLRYYLERPVTRLHHAGDVHDFFTKSERGYVLMNDEEFARLRSEGMNLRAVSERPAVTGTTGRGLRRQKWGALVVATLDDTPRTTPPAVK
Ga0190272_1160092513300018429SoilAGIVSGFTIFDLGLELPRATLLIPISLAVSGLVMEATILRRRAVSATLFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADSLRPKLAAEDHVALYRLEKWRFSLRYYLERPLGRLQEPADVRKFLTDKGGYILMLDEDFARLRQDGINLRSVAERPAVTGTTGTGLRQQKWGALVVATSDDTPRK
Ga0190272_1182598913300018429SoilAILGILLVIIGAFAGFSLFDLGLELPRAAVLMPVSLVVGGAALLVTIARRRAVSPILFAAIVSMLLVIYGSVVMIGLPVLERARPTAAVAEGLRSRLADSDQVGLYRLEKWRFSLRYYLERPVTRLHHASDVQEFFTRSNRGYVLMLDEEFARLRSEGVNLRAVSEQPAVTGTTGRGFRRQKWGALVVATLDDTPRTADPAVK
Ga0190269_1154348413300018465SoilARDNVYARWSVIALGVILVAAGGVSAFSLFDLGLDLPLAAVVMPISLIAGGLVLEGTILRRRSVSPMVFAAVLVMLLVIYAAALRIGLPVLERARPTVAVADSLRPKLAAGDEVALYRLEKWRFSLRYYLERPLGRLQEPADVEKFITAQGDYILMLDEDFKRLRESGINLRAVSTRPAVTGT
Ga0190270_1223182113300018469SoilGLSLFDLGLDLPRAALLIPASLAAGGVVLVATILGRKTASPMVFSAVLVMLLVVYSCVLTIGLPLLERARPTAAIAEHLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR
Ga0190270_1274660823300018469SoilVAIGLPVLERARPTEVVADSLRPNLSADDQVALYRLEKWRFSLRYYLERPLGRLEEPADVRKFLTGKGTYILMLDEDFARLRKDGINLRAVSEQPAVTGTVGKGLRRQKWGSLVVAISDDTPRTTDTPRSR
Ga0173481_1078735213300019356SoilSAVLVMLLVVYSCVLTIGLPVLERARPTAAIAENLRPQLAPDDRVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTNTAR
Ga0193738_106829043300020020SoilAVAGSLRPNLAAGDEVALYRLEKWRFSLRYYLERPLGKLQDPADVRKFITGDGDYILMLDEDFNRLRDSGINLRAVSALPAVTGTTGKGLRRQKWGSLVVATSDDTPRTTETPP
Ga0210380_1006268013300021082Groundwater SedimentERARPTAAIAEHLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTA
Ga0224500_1037864213300022213SedimentLAAGGLALGAAILRRGAVSPRLFGVVLVMLLVVYSSVLAIGLPVLERARPTAAIEGNLRPKLAADDQIGLYKLEKWRFSLRYYLERPLSRLQSASDVKQFLSDKGGYILLLDEDFARLREDGVSLRVVSQRPAVTGTSGRGLRRQKWGALIVATSDDTPRPMEQPR
Ga0224510_1056469913300022309SedimentRPDLAAARDNIFARWSVAAVGIILVLAGAIAGLSLFDLGLDLPQSSVLIPVSLAAGGLALGAAILRRGAVSPRLFGVVLVMLLVVYSSVLAIGLPVLERARPTAAIEGNLRPKLAADDQIGLYKLEKWRFSLRYYLERPLSRLQSASDVKQFLSDKGGYILLLDEDFARLREDGVSLRVVSQRPAVTGTSGRGLRRQKWGALIVATSDDTPRPMEQPR
Ga0247799_102715523300023072SoilAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR
Ga0207682_1013255533300025893Miscanthus RhizosphereRLEDLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPADVKEFLHKKGSYILMSDEDLARLRHDGVNLRAVSERPAVTGTTGRGLRHQKWGALVVATSDDTPRTTNTAR
Ga0207701_1102151323300025930Corn, Switchgrass And Miscanthus RhizosphereLIPASLAAGGVVLVATILGRKTASPMVFSAVLVMLLVVYSCVLTIGLPLLERARPTAAVAEHLRPQLAPDDQVGLYRLEKWRFSLRYYLERPLSKLQEPAEVKEFLHKKGSYILMSDEDLARLRHDGVNLRAVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTSNTAR
Ga0207675_10142544013300026118Switchgrass RhizosphereTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR
Ga0209967_107387513300027364Arabidopsis Thaliana RhizosphereAGLVMEATILRSRAVSPTLFGAVVAVLLVVYACVLTMGLPLLERARPTAATAENLRLKLSADDQIGLYRLEKWRFSLRYYLERPVDRLQDPADVRDFLTKKGGYILMLDEDFARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGALIVATSDDTPRTTEKPR
Ga0208685_104404513300027513SoilLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR
Ga0208185_104021913300027533SoilVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR
Ga0209818_121666713300027637Agricultural SoilSGFTLFDLGLELPRAALLIPISLAAGGVVLAMTILRRRAVSPSLFGAVIVMLLVIYGSVATIGLPVLERARPTAALADSLRPKLAADDQVALYRLEKWRFSLRYYLERPLGRLQEPDDVRKFLTDKGGYILMLDEDYARLRNDGINLRSVAERRAVTGTTGTGLRKQKWGALVVATSDDTPRR
Ga0209703_111066933300027723Freshwater SedimentAIGLPVLESTRPTAAVAESLRPKLAADEQIGLYRLEKWRFSLRYYLERPVSRLQSSTEVRDFLNTRRGYVLMLDEDFARLQHEGVRLRVVAERPAVTGTTGKGLRRQKWGALVVATSDDTPRTTER
Ga0209592_117425413300027731Freshwater SedimentRPTAAVAESLRPKLAADEQIGLYRLEKWRFSLRYYLERPVSRLQSSTEVRDFLNTRRGYVLMLDEDFARLQHEGVRLRVVAERPAVTGTTGKGLRRQKWGALVVATSDDTPRTTER
Ga0209486_1025348713300027886Agricultural SoilSLSVFRPNVTAARDNVFARWSIVTLGAILVAAGIVSGVTLFDLGLELPRAALMIPISLAAAGVLMEATILRRRVVSPTLFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADTLRPKLDADDQVALYRLEKWRFSLRYYLERPLGRLQEPADVRRFLTNNGGYILMLDEDFARLRRDGINLKSVAERPAVTGTTGKGLRKQKWGALVVATSDDTPRK
Ga0209486_1108226513300027886Agricultural SoilELPRAALMIPISLAAAGVLMEATILRRRVVSPTLFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADTLRPKLGADDQVALYRLEKWRFSLRYYLERPLGRLQEPADVRKFLTDNGGYILMLDEDFARLRRDGINLKSVAERPAVTGTTGKGLRKQKWGALVVATSDDTPRR
Ga0299907_1109514313300030006SoilILIPLCLAAGGAALIVTIVRRQTVSPVLFGTVVALLLVVYGSVVVIGLPVLERARPSAAVAGDLRSRLAEGDQVGLYGLEKWRFSLRYYLERPVSRLEHPGDVGDFLRKFERAYVLMLDEDFVRLRSQGVGLRAVSERPAVTGTAGRGLRRQKWGALVVATSDDTPRTEPALR
Ga0299906_1058200313300030606SoilLVLEATILGRKAVSPMVFGAVLVMLLVIYGSVLTMGLPVLERARPTEAVADTLRPRLSADDQVALYRLEKWRFSLRYYLERPLGRLQNPTDVRDFLTTKGGYILMLDEDFARLRKDGVNLRAVSQRPAVTGTTGKGLRRQKWGALVVAISDDTPRTKEKP
Ga0299914_1095291923300031228SoilDSLRPNLSADDQVALYRLEKWRFSLRYYLERPLGRLQEPADVRNFLTGKGNYILMLDEDFARLRKDGINLRAVSERPAVTGTIGKGLRRQRWGTLVVAISDDTPRTTQTPRSR
Ga0310886_1042643613300031562SoilLLERARPTAAVAANLRPKLSADDQIGLYRLEKWRFSLRYYLERPVDRLQDPADVKDFLSKKGGYILMLDEDFARLRADGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTETPR
Ga0310886_1086275313300031562SoilPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR
Ga0307410_1116217423300031852RhizospherePKLAVDDQVALYRLEKWRFSLRYYLERPLGRLQDPADVRKFLDNKGGYILMLDEDFARLRSDGVSLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTPETAR
Ga0307407_1079072023300031903RhizosphereQFIPISLAAAGLVLEATILRRQRVSPTVFGAVLVMLLVVYSCVLAIGLPLLERARPTAAVAQTLRPKLAVDDQVALYRLEKWRFSLRYYLERPLGRLQDPADVRKFLDNKGGYILMLDEDFARLRSDGVSLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTPETAR
Ga0307412_1232638013300031911RhizosphereAMLIPISMAAGGAVLGAAVLRRSAVSPSVFGAVLVMLLVIYGCVLTMGVPVLARARPTEALADSLRPRLSARDQVALYRLEKWRFSLRYYLERPLGTLQQPDDVRQFIAGSGGYILMLDEDFARLRSDGINLRAVSERPAVTGTTGKGLRRQKWGSLVVATSDDTP
Ga0310885_1038299013300031943SoilVVSPTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR
Ga0310885_1072799413300031943SoilPRAAVLIPISLAAAGLIVEATILRRRAVSPALFGAVIVMLLLVYACVLTMGLPLLERARPTAAVAANLRPKLSADDQIGLYRLEKWRFSLRYYLERPVDRLQDPADVKDFLSKKGGYILMLDEDFARLRADGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTETPR
Ga0307416_10322743813300032002RhizospherePPAAVLIPISLAAGGLVLETTILRRRAVTPTLFASMLVMLLVIYICVLTIGLPLLERARPTAAVADSLRPKLTKDDRIGLYRLEKWRFSLRYYLERPVDRLQNAADVKEFLTTKSGYLLMLDEDFTRLRDEGVNLRAISERPAVTGTTGKGLRRQKWGALIVATSDDTPRTTNKP
Ga0310897_1062840613300032003SoilGGVVLETTILRRKAVSPLVFSAVLVMLLVVYSCVLMMGLPLLERARPTAAIAENLRPQLAADDQVGIYRLEKWRFSLRYYLERPLSKLQEPADVKEFLNKKGGYILLLDEDLARLRSDGVRLKTVSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTNTAR
Ga0307411_1089797613300032005RhizosphereLRPKLAVDDQVALYRLEKWRFSLRYYLERPLGRLQDPADVRKFLDNKGGYILMLDEDFARLRSDGVSLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTPETAR
Ga0307411_1216252513300032005RhizosphereAVSIIAGLALFDLGLDLPRTTLLIPLSLAAGGLVLEATILRQRAVSPILFGGVVVMLLAVYGCLTVIGLPLLERARPTEALAESLRPKLSADDHVALYRLEKWRFSLRYYLDRPLGRLNQADDVREFLTTKGGYILMLDEDFARLRGEGVSLRAVAERRAVTGTTGKGLRRQK
Ga0310906_1045826423300032013SoilLMALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR
Ga0310899_1015134113300032017SoilRAAVLIPISLAAAGLIVEATILRRRAVSPALFGAVIAMLLLVYACVLTMGLPLLERARPTAAVAANLRPKLSADDQIGLYRLEKWRFSLRYYLERPVDRLQDPADVKDFLSKKGGYILMLDEDFARLRNDGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTETPR
Ga0310896_1029670213300032211SoilRYVYPAAPACCLLAARAWMSVGTFQSDLTVARNNVFARWSVIVLGIVLFIAGAVASFSLFDLGLELPRAAVLIPISLAAAGLIVEATILRRRAVSPALFGAVIVMLLLVYACVLTMGLPLLERARPTAAVAANLRPKLSADDQIGLYRLEKWRFSLRYYLERPVDRLQDPADVKDFLSKKGGYILMLDEDFARLRADGVNLRAVSERPAVTGTTGRGLRRQKWGALVVATSDDTPRTTETPR
Ga0370495_0171878_359_6913300034257Untreated Peat SoilDDRIGLYRLEKWRFSLRYYLERPLSRLQDSSDVRQFLTTKGGYILMLDEDYARLRKDGVNLRAHSERPAVTGTTGRGLRRQKWGSLVVATSDDTPRTTEKPRQDVPKATP
Ga0370495_0180127_219_6533300034257Untreated Peat SoilVSPTTFGAVVVMLLVIYGSVAAFGLPVLERARPTEALADSLRPKLEADDQVALYRLEKWRFSLRYYLERPLGKLQEPADVRKFLTDNGGYILMLDEDFARLRRDGINLRSVAERPAVTGTTGTGLRKQKWGALVVATSDDTPRK
Ga0314780_109127_2_4993300034659SoilAAGGAALAVVTFRQRVVSPTLFTSLLVALLVIYACVAAIGLPVLESTRPTAAVAAGLRPKLAANERVGLYRLEKWRFSLRYYLEHPVSRLQNSGEVKEFLNNKGGYILMFDEDFTRLRNDGVKLRSVDERRAVTGTTGKGLRRQKWGALVVATSDDTPRTEEKPR
Ga0334948_124778_62_5383300034760Sub-Biocrust SoilMVLGGILVIAGVVSGFTLFDLGLELPRAALLIPISLAASGVVLEITMLRRRAVSPALFGAVIVMLLVIYASVSTIGLPVLERARPTEALADSLRPQLAADDQVALYRLEKWRFSLRYYLERPLGRLQDPNDVREFLTDKGGYILMLDEDFARLRSNGIN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.