Metagenome / Metatranscriptome Family F099500

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099500
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	97 residues
Representative Sequence	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ
Number of Associated Samples	59
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.47 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	89.32 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.757 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (36.893 % of family members)
Environment Ontology (ENVO)	Unclassified (42.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (41.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 33.67% Coil/Unstructured: 52.04%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF14520	HHH_5	5.83
PF06103	DUF948	1.94
PF08299	Bac_DnaA_C	1.94
PF17203	sCache_3_2	1.94
PF00990	GGDEF	1.94
PF04972	BON	1.94
PF03733	YccF	1.94
PF08734	GYD	1.94
PF00248	Aldo_ket_red	1.94
PF00072	Response_reg	0.97
PF01966	HD	0.97
PF06210	DUF1003	0.97
PF06314	ADC	0.97
PF07589	PEP-CTERM	0.97
PF02954	HTH_8	0.97
PF04228	Zn_peptidase	0.97
PF01527	HTH_Tnp_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	1.94
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	1.94
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.94
COG4768	Uncharacterized conserved protein YoxC, contains an MCP-like domain	Function unknown [S]	1.94
COG2321	Predicted metalloprotease	General function prediction only [R]	0.97
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.97
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.05 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	65.05 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	65.05 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	56.31 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	55.34 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
unclassified Syntrophaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae	55.34 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Syntrophaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	55.34 %
Unclassified	root	N/A	25.24 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006224\|Ga0079037_100237631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1659	Open in IMG/M
3300006224\|Ga0079037_100324762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1435	Open in IMG/M
3300006224\|Ga0079037_100402769	Not Available	1295	Open in IMG/M
3300006224\|Ga0079037_100408041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1287	Open in IMG/M
3300006224\|Ga0079037_100842996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	902	Open in IMG/M
3300006224\|Ga0079037_101228678	Not Available	745	Open in IMG/M
3300006224\|Ga0079037_101763165	Not Available	619	Open in IMG/M
3300006930\|Ga0079303_10532746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	510	Open in IMG/M
3300009009\|Ga0105105_10767911	Not Available	579	Open in IMG/M
3300009037\|Ga0105093_10028458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2415	Open in IMG/M
3300009053\|Ga0105095_10027636	All Organisms → cellular organisms → Bacteria	3056	Open in IMG/M
3300009053\|Ga0105095_10211610	Not Available	1062	Open in IMG/M
3300009078\|Ga0105106_10218438	Not Available	1389	Open in IMG/M
3300009078\|Ga0105106_10343469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1079	Open in IMG/M
3300009078\|Ga0105106_10698370	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009078\|Ga0105106_10888426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	634	Open in IMG/M
3300009082\|Ga0105099_10051883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2162	Open in IMG/M
3300009087\|Ga0105107_10091036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2148	Open in IMG/M
3300009087\|Ga0105107_10122018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1835	Open in IMG/M
3300009087\|Ga0105107_10320356	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300009087\|Ga0105107_10461556	Not Available	885	Open in IMG/M
3300009087\|Ga0105107_10755315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	676	Open in IMG/M
3300009091\|Ga0102851_12095239	Not Available	642	Open in IMG/M
3300009091\|Ga0102851_12235922	Not Available	623	Open in IMG/M
3300009111\|Ga0115026_10150313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1500	Open in IMG/M
3300009111\|Ga0115026_10864779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	712	Open in IMG/M
3300009119\|Ga0117938_104007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	990	Open in IMG/M
3300009131\|Ga0115027_10201330	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300009146\|Ga0105091_10630784	Not Available	556	Open in IMG/M
3300009153\|Ga0105094_10144338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1355	Open in IMG/M
3300009153\|Ga0105094_10156008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1301	Open in IMG/M
3300009153\|Ga0105094_10269307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	979	Open in IMG/M
3300009153\|Ga0105094_10274778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	969	Open in IMG/M
3300009153\|Ga0105094_10425232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	770	Open in IMG/M
3300009157\|Ga0105092_10076065	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300009157\|Ga0105092_10244290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1008	Open in IMG/M
3300009166\|Ga0105100_10203560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1179	Open in IMG/M
3300009166\|Ga0105100_10453408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	778	Open in IMG/M
3300009167\|Ga0113563_13028651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	569	Open in IMG/M
3300009167\|Ga0113563_13478688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	533	Open in IMG/M
3300009171\|Ga0105101_10581895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	555	Open in IMG/M
3300009552\|Ga0116138_1023740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1877	Open in IMG/M
3300012931\|Ga0153915_11421117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	811	Open in IMG/M
3300012931\|Ga0153915_11694210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	740	Open in IMG/M
3300012964\|Ga0153916_10837221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1000	Open in IMG/M
3300012964\|Ga0153916_11540324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	740	Open in IMG/M
3300012964\|Ga0153916_11966485	Not Available	655	Open in IMG/M
3300014496\|Ga0182011_10107574	Not Available	1942	Open in IMG/M
3300014883\|Ga0180086_1105747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	718	Open in IMG/M
3300017941\|Ga0187850_10020506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3815	Open in IMG/M
3300018005\|Ga0187878_1374015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	501	Open in IMG/M
3300018018\|Ga0187886_1242828	Not Available	683	Open in IMG/M
3300018070\|Ga0184631_10223321	Not Available	776	Open in IMG/M
3300022185\|Ga0079039_1232467	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300022593\|Ga0236338_1025834	Not Available	1384	Open in IMG/M
3300022653\|Ga0236337_1116127	Not Available	2324	Open in IMG/M
3300023311\|Ga0256681_11185842	Not Available	1145	Open in IMG/M
3300023311\|Ga0256681_12264178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1172	Open in IMG/M
3300025499\|Ga0207931_1035129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1057	Open in IMG/M
3300027713\|Ga0209286_1005462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4349	Open in IMG/M
3300027713\|Ga0209286_1005827	All Organisms → cellular organisms → Bacteria	4230	Open in IMG/M
3300027713\|Ga0209286_1125438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	949	Open in IMG/M
3300027713\|Ga0209286_1327750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	529	Open in IMG/M
3300027722\|Ga0209819_10290107	Not Available	564	Open in IMG/M
3300027723\|Ga0209703_1138756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	918	Open in IMG/M
3300027723\|Ga0209703_1221432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	690	Open in IMG/M
3300027726\|Ga0209285_10039948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1374	Open in IMG/M
3300027726\|Ga0209285_10177106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	665	Open in IMG/M
3300027731\|Ga0209592_1176079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	760	Open in IMG/M
3300027818\|Ga0209706_10091243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1520	Open in IMG/M
3300027818\|Ga0209706_10149526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1149	Open in IMG/M
3300027871\|Ga0209397_10384149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	685	Open in IMG/M
3300027877\|Ga0209293_10352434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	756	Open in IMG/M
3300027896\|Ga0209777_10156463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1873	Open in IMG/M
3300027900\|Ga0209253_10591145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	816	Open in IMG/M
3300027902\|Ga0209048_10043882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3695	Open in IMG/M
3300027902\|Ga0209048_10235865	Not Available	1312	Open in IMG/M
3300027955\|Ga0209078_1009681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2656	Open in IMG/M
3300032401\|Ga0315275_12627175	Not Available	519	Open in IMG/M
3300033408\|Ga0316605_10452945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1171	Open in IMG/M
3300033408\|Ga0316605_11433489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	670	Open in IMG/M
3300033413\|Ga0316603_11790902	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300033419\|Ga0316601_100322986	Not Available	1422	Open in IMG/M
3300033419\|Ga0316601_100514874	Not Available	1150	Open in IMG/M
3300033419\|Ga0316601_100850031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	904	Open in IMG/M
3300033419\|Ga0316601_102176206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	559	Open in IMG/M
3300033419\|Ga0316601_102373077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	534	Open in IMG/M
3300033433\|Ga0326726_10221189	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300033433\|Ga0326726_10382153	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300033433\|Ga0326726_10601341	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1057	Open in IMG/M
3300033433\|Ga0326726_11061555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	787	Open in IMG/M
3300033433\|Ga0326726_11908147	Not Available	578	Open in IMG/M
3300033434\|Ga0316613_11118793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	542	Open in IMG/M
3300033480\|Ga0316620_10224887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1586	Open in IMG/M
3300033481\|Ga0316600_11053834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	576	Open in IMG/M
3300033482\|Ga0316627_101759879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	636	Open in IMG/M
3300033483\|Ga0316629_11335339	Not Available	578	Open in IMG/M
3300033485\|Ga0316626_10770410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	842	Open in IMG/M
3300033486\|Ga0316624_10058547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2508	Open in IMG/M
3300033486\|Ga0316624_10710121	Not Available	886	Open in IMG/M
3300033489\|Ga0299912_10968740	Not Available	637	Open in IMG/M
3300033513\|Ga0316628_102539015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	676	Open in IMG/M
3300033521\|Ga0316616_102769893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	660	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	73.79%
Terrestrial	Environmental → Terrestrial	26.21%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	70.87%
Soil	Environmental → Terrestrial → Soil	20.39%
Peat	Environmental → Terrestrial → Peat	4.85%
Sediment	Environmental → Aquatic → Sediment	2.91%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.97%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	41.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.45%
Lake	Environmental → Aquatic → Freshwater → Lake	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	41.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	17.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	36.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.48%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	11.65%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.97%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009119	Lake sediment microbial communities from Leach Lake, MN	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300022653	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027955	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0079037_1002376312	3300006224	Freshwater Wetlands	MKKKIFILLSVSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGRECSIMTITSASSH*
Ga0079037_1003247622	3300006224	Freshwater Wetlands	MTKQIFILLSFSILLFSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0079037_1004027691	3300006224	Freshwater Wetlands	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWGLEDEHTLLFYRQNSPIAKVNLKGCTLTVSSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0079037_1004080413	3300006224	Freshwater Wetlands	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTRWGLEGDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0079037_1008429962	3300006224	Freshwater Wetlands	MEKKIFILLSFSILLFFPNMVLSDCLDLGGFTSWKVESDHTILFYKQNSPIAKVNLKGCKVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0079037_1012286782	3300006224	Freshwater Wetlands	MTKQIFILFSFSILLFSPSLVLSDCLDLGGFTRWEVEGDHTLLFYRQNSPVAKVNLKGCTVTASSTVHLKKSFVCDSDSLIVDGQECAIMTISSASSP*
Ga0079037_1017631652	3300006224	Freshwater Wetlands	MKIKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSGSSQ*
Ga0079303_105327461	3300006930	Deep Subsurface	KMKKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0105105_107679111	3300009009	Freshwater Sediment	MKKRIFILLSVSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0105093_100284583	3300009037	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDG
Ga0105095_100276361	3300009053	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYMCDSDSLIVDGQECAIMTITSASSQ*
Ga0105095_102116101	3300009053	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCNSDSLIVDGRECSIMTITSASSH*
Ga0105106_102184383	3300009078	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSSSSQ*
Ga0105106_103434691	3300009078	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLI
Ga0105106_106983701	3300009078	Freshwater Sediment	KKIFILLSFSILLSSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPVAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0105106_108884261	3300009078	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAI
Ga0105099_100518831	3300009082	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0105107_100910361	3300009087	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSGSSQ*
Ga0105107_101220182	3300009087	Freshwater Sediment	VRQAKYCEGEAWKEGIQKMKKKIFILLSFSILLFFPNLVLSDCLDFGGFSSWKVEGNHTILFYRQNSPIAKVNLKGCTVTESSTVSLTKNYVCNSDSLIVDGQECAIMTITSASSQ*
Ga0105107_103203563	3300009087	Freshwater Sediment	MKNKIFILLSFSILLFSPNLVLPDCLDLGGFTSWKVEGDHTILFYRQNSPMAKVNLKGCTVTESSTVGLKKSYVCDSDSLIVDGQECAIMTISSASSQ*
Ga0105107_104615561	3300009087	Freshwater Sediment	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTRWEVEGDHTLLFYRQNSPVAKVTLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0105107_107553151	3300009087	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGQECSIMTITSASSQ*
Ga0102851_120952391	3300009091	Freshwater Wetlands	LKMKKKIFILLSFSILLFSPSLVLSDCLDLGGFTRWGLEGDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0102851_122359221	3300009091	Freshwater Wetlands	MKKRIFILLSFSILLFSPNLALSDCLDLGSFTSWKVEGDHTILFYRQNSPMAKVNLKGCKVTASSTVRLTKNYVCDSDSLIVDGRECSIMTISSASSQ*
Ga0115026_101503132	3300009111	Wetland	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGRECSIMTITSASSH*
Ga0115026_108647791	3300009111	Wetland	EGRSLKNEKKIFILLSFSILLLSPNLVLPDCLDLGSFTSWKIEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYVCNSDSLIVDGQECHIMAITSGSSH*
Ga0117938_1040071	3300009119	Lake Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0115027_102013303	3300009131	Wetland	MKKKIFILFSFSILLFSPSLVLSDCLDLGGFTRWEVEGDHTLLFYRQNSPVAKVNLKGCTVTASSTVHLKKSFVCDSDSLIVDGQECAIMTISSASSP*
Ga0105091_106307842	3300009146	Freshwater Sediment	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTRWEVEGDHTLLFYRQNSPVAKVTLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECA
Ga0105094_101443382	3300009153	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGRECSIMTITSASSQ*
Ga0105094_101560082	3300009153	Freshwater Sediment	VRQAKYCEGEAWKEGVQKMKKKIFILLSFSILLFFPNLVLSDCLDFGGFTSWKVEGNHTILFYRQNSPIAKVNLKGCTVTESSTVSLTKNYVCNSDSLIVDGQECAIMTITSASSQ*
Ga0105094_102693072	3300009153	Freshwater Sediment	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTRWGLEDDHTLLFYRQNSPVAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0105094_102747781	3300009153	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSSSSQ*
Ga0105094_104252321	3300009153	Freshwater Sediment	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIATVNLKGCKVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0105092_100760652	3300009157	Freshwater Sediment	MKTKIFILLSSSILLFSPSLVLSDCLDLGGFTNWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVSLKKSYMCDSDSLIVDGQECAIMTISSASSP*
Ga0105092_102442901	3300009157	Freshwater Sediment	MKKKIFILLSFSIVLFSPSLVLPDCLDLGGFTGWQVEGDHTVLFYRQNSPIAKINLKGCTLTPASTVRLKKSYVCDNDSLIVDGQDCAIMTIDSASSQ*
Ga0105100_102035602	3300009166	Freshwater Sediment	VCQAKYCEGEAWKEGVQKMKKKIFILLSFSILLFFPNLVLSDCLDFGGFTSWKVEGNHTILFYRQNSPIAKVNLKGCTVTESSTVSLTKNYVCNSDSLIVDGQECAIMTITSASSQ*
Ga0105100_104534081	3300009166	Freshwater Sediment	MEKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIATVNLKGCKVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0113563_130286512	3300009167	Freshwater Wetlands	MKKKFILLSFSILLFSPNLVLSDCLDLGGFTNWKVEGGHTILFYRQNSPMAKVNLKGCTVTASSTVSLTKSYVCNSDSLIVDGRECAIMTITSASSQ*
Ga0113563_134786881	3300009167	Freshwater Wetlands	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0105101_105818951	3300009171	Freshwater Sediment	SFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPMAKVILKGCTVTESSTVRLKKSYVCDSDSLIVDGQECAIMTISSASSQ*
Ga0116138_10237402	3300009552	Peatland	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWEVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSGSSQ*
Ga0153915_114211171	3300012931	Freshwater Wetlands	MKKKMFILLSFSILLFSPNLVLSDCTDLGHFTSWNVQDNHTILFYRQNSPLAKVNLQGCTVTASSNIRLTKSYLCNGDVLIVDGRECTIMTITSASSQ*
Ga0153915_116942101	3300012931	Freshwater Wetlands	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYVCDSDSLIVDGQECAIMTIGSASSP*
Ga0153916_108372211	3300012964	Freshwater Wetlands	MKKKIFILLCFPILLFSPNLVLSDCLDLGGFTSWQVEGDHTILFYRQNSPIAKVNLKGCTVTAASTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ*
Ga0153916_115403241	3300012964	Freshwater Wetlands	MKKKIFILLSFSILLFSPNLVLSDCLDLGHFTSWNVQDNHTILFYRQNSPLAKVNLQGCTVAASSNIRLTKSYLCNGDVLIVDGRECTIMTITSASSQ*
Ga0153916_119664851	3300012964	Freshwater Wetlands	MKKKIFILLSFSILLFSPSLVLSDFLDLGGFTSWEVEGDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP*
Ga0182011_101075744	3300014496	Fen	MKKRLFILFSVSILLFSPNLVLSDCLDLGSFTSWKLEGDHTILFYRQNSPIAKVNLKGCTLTTSSTVGLTKSYVCNSDSLIVDGQECAIMTITSASSQ*
Ga0180086_11057471	3300014883	Soil	MKTKIFILLSFSILLLSPNLVLSDCLDIGSFTSWKIEGDHTILFYRQNSPIAKVNVKGCTVTESSTVRLTKSYVCNSDSLIVDGQECAIMTITSASSQ*
Ga0187850_100205066	3300017941	Peatland	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWEVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSGSSQ
Ga0187878_13740151	3300018005	Peatland	MKNKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSNVRLTKNYVCDSDSLIVDGQECAIMTITSASSQ
Ga0187886_12428281	3300018018	Peatland	KIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSGSSQ
Ga0184631_102233212	3300018070	Groundwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVRLTKNYMCDSDSLIVDGQECAIMTITSASSR
Ga0079039_12324672	3300022185	Freshwater Wetlands	MKNKIFILFSFSFLLFSPSLVLTDCLDLGGFTSWEVEGDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0236338_10258342	3300022593	Freshwater	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWEVQGDHTILFYRQNSPIAKVNLKGCTLTTSSTVGLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0236337_11161271	3300022653	Freshwater	MKKKIFILLSFSILLFSPNLVLSDCLDIGGFTSWKIEGDHTILFYRQNSPIAKVNLKGCTLTTSSTVGLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0256681_111858422	3300023311	Freshwater	MKKQLFILFSVSILLFSPNLVLSDCLDLGSFTNWRLEGDHTILFYRQNSPIAKVNLKGCTLTTSSTVGLTKSYVCNSDSLIIDGQECAIMTITSASSQ
Ga0256681_122641783	3300023311	Freshwater	MKKKIFILLSFSILLFSPNLVLSDCLDIGGFTSWKIEGDHTILFYRQNSPIAKVNLKGCTVTESSTVRLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0207931_10351292	3300025499	Arctic Peat Soil	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ
Ga0209286_10054624	3300027713	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGRECSIMTITSASSQ
Ga0209286_10058274	3300027713	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYMCDSDSLIVDGQECAIMTITSASSQ
Ga0209286_11254381	3300027713	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSGSSQ
Ga0209286_13277501	3300027713	Freshwater Sediment	IFILLSFSILLFFPNLVLSDCLDFGGFSSWKVEGNHTILFYRQNSPIAKVNLKGCTVTESSTVSLTKNYVCNSDSLIVDGQECAIMTITSASSQ
Ga0209819_102901071	3300027722	Freshwater Sediment	MKTKIFILLSFSILLFSPSLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVSLKKSYMCDSDSLIVDGQECAIMTISSASSP
Ga0209703_11387562	3300027723	Freshwater Sediment	MKKKIFILLSVSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSSSSQ
Ga0209703_12214321	3300027723	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSL
Ga0209285_100399481	3300027726	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIATVNLKGCKVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ
Ga0209285_101771061	3300027726	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGRECSIMTIT
Ga0209592_11760792	3300027731	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAIMTITSSSSQ
Ga0209706_100912432	3300027818	Freshwater Sediment	MKKKIFILLSFSILLFFPNLVLSDCLDFGGFSSWKVEGNHTILFYRQNSPIAKVNLKGCTVTESSTVSLTKNYVCNSDSLIVDGQECAIMTITSASSQ
Ga0209706_101495261	3300027818	Freshwater Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTIIFYRQNSPMAKVNLRGCKVTASSTVRLMKSYVCDSDSLIVDGQECSIMTITSASSQ
Ga0209397_103841491	3300027871	Wetland	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0209293_103524343	3300027877	Wetland	MKKKIFILLSVSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGRECSIMTITSASSH
Ga0209777_101564631	3300027896	Freshwater Lake Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDIGGFTSWQVQGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLMKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0209253_105911451	3300027900	Freshwater Lake Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGHFTSWNVQDDHTILFYRQNSPLAKVHLKGCTVTASSNIRLPKSYMCNSDILIVDGQECTIMTITSASSQ
Ga0209048_100438824	3300027902	Freshwater Lake Sediment	MKKKIFILLSFSILLFSPNLVLSDCLDLGSFTSWKVEGNHTILFYRQNSPIAKVNLKGCTVTESSTVRLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0209048_102358652	3300027902	Freshwater Lake Sediment	MKKKIFILLSFSILLFSPSLVLSDCLDIGGFTSWQVQGDHTILFYRQNSPIAKVNLKGCTVTASSTVGLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0209078_10096811	3300027955	Freshwater Sediment	LVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYMCDSDSLIVDGQECAIMTITSASSQ
Ga0315275_126271751	3300032401	Sediment	MKKKIFILLRFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPMAKVDLKGCTVTASSTVGLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0316605_104529453	3300033408	Soil	MTKQIFILLSFSILLFSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0316605_114334892	3300033408	Soil	KMKKKIFILLSFSILLFSPSLVLADCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGRECSIMTITSASSH
Ga0316603_117909022	3300033413	Soil	MTKQIFILFSFSILLFSPSLVLSDCLELGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0316601_1003229863	3300033419	Soil	MTKQIFILLSFSILLFSPSLVLSDCLDLGGFTRWEVEGDHTLLFYRQNSPVAKVNLKGCTVTASSTVHLKKSFVCDSDSLIVDGQECAIMTISSASSP
Ga0316601_1005148742	3300033419	Soil	MKKKIFILLSFSILLFSPSLVLSDCLDLGGFTSWEVEGDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQ
Ga0316601_1008500311	3300033419	Soil	MTKQIFILFSFSILLFSPSLVLSDCLDLGGFTSWGLEDDHTLLFYRQNSPIAKVNLKGCTVTASSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0316601_1021762061	3300033419	Soil	FSILLCSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCKVTASSTVRLTKNYMCDSDSLIVDSQECAIMTITSASSQ
Ga0316601_1023730771	3300033419	Soil	LEGRSLKNEKKIFILLSFSILLLSPNLVLPDCLDLGSFTSWKIEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYVCNSDSLIVDGQ
Ga0326726_102211892	3300033433	Peat Soil	MKKKIFILLSFSILLFSPNLVLSDCLDLGHFTSWNVQDNHTILFYRQNSPLAKVDLQGCTVTASSNIRLTKSYLCNGDVLIVDGRECTIMTITSASSQ
Ga0326726_103821532	3300033433	Peat Soil	MKKKIFILLSVSIQLFSPNLVLSDCLDIGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCTVTASSTVSLTKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0326726_106013412	3300033433	Peat Soil	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTGWKVQGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLTKSYVCDSDSLIVDGQECAIMTITSASSQ
Ga0326726_110615551	3300033433	Peat Soil	MKKRIFILLGFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTVLFYKQNSPIAKVNLKGCTVTASSTVSLTKSYMCNSDSLIVDGQECAIMTI
Ga0326726_119081471	3300033433	Peat Soil	MKTKIFILLSFSILLFSPSLVLSDCLDIGGFTSWQVQGDHTILFYRQNSPIAKVNLKGCTVTASSTVGLTKSYVCNSDSLIVDGKECAIMTITSASSQ
Ga0316613_111187931	3300033434	Soil	MKKKIFILLSFSILLFSPSLVLADCLDLGGFTSWKVEDDHTVLFYRQNSPIAKVNLKGCTVTESSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0316620_102248872	3300033480	Soil	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWEVQGDHTILFYRQNSPIATVNLKDCKVTASSTVRLMKSYVCDSDSLIVDGKECAIMTISSGSSR
Ga0316600_110538341	3300033481	Soil	MKKKIFILLSFSILLFSPSLVLADCLDLGGFTSWKVEGDHTVLFYRQNSPIAKVNLKGCTVTESSTVHLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0316627_1017598792	3300033482	Soil	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTESSTVHLKKSYVCDSDSLIVDGQECAI
Ga0316629_113353391	3300033483	Soil	MTKQIFILFSFSILLFSPSLVLSDCLDLGGFTRWEVEGDHTLLFYRQNSPVAKVNLKGCTVTASSTVHLKKSFVCDSDSLIVDGQECAIMTISSASS
Ga0316626_107704101	3300033485	Soil	MKKTIFILLSFSILLFSPGLVLSDCLDLGGFTSWKVEGDHTILFYRQNSPIAKVNLKGCTVTASSTVRLKKSYVCDSDSLIVDGQECAIMTISSASSP
Ga0316624_100585472	3300033486	Soil	MKKKIFILLSFSILLFSPNLVLSDCLDFGGFTSWEVQGDHTILFYRQNSPIATVNLKDCKVTASSTVRLMKSYVCDSDSLIVDGKECAIMTISSGSSR
Ga0316624_107101211	3300033486	Soil	MKTKIFILLCFSILLFSTSPVLSDCLDLGGFTSWKVEGDHTILLYKQNSPIVKVNLKGCKVTASSTVRLTKNYVCNSDSLIVDGQECAIMTITSASSQ
Ga0299912_109687401	3300033489	Soil	MKKKIFILLSFSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVRLTKSYMCDSDSLIVDGQECAIMTITSASSQ
Ga0316628_1025390151	3300033513	Soil	MKKKIFILSFSILLFSPNLVLSDCLDLGGFTSWEVQGDHTILFYRQNSPIAKVNLKGCTVTASSTVHLMKSYVCNSDSLIVDGQECAIMTITSASSQ
Ga0316616_1027698931	3300033521	Soil	MKKKIFILLSVSILLFSPNLVLSDCLDLGGFTSWKVQGDHTILFYRQNSPIAKVNLKGCKVTASSTVSLTKSYVCDSDSLIVDGKECAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099500

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences