Metagenome Family F099489

Overview

Basic Information

• Family ID: F099489
• Family Type: Metagenome
• Number of Sequences: 103
• Average Sequence Length: 41 residues
• Representative Sequence: MSDVAAYHVLFPVQGGMWTGYSQSTYLPALETIHDMLP
• Number of Associated Samples: 10
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 50.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.97 %
• Associated GOLD sequencing projects: 6
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (99.029 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.48%
  β-sheet: 0.00%
  Coil/Unstructured: 51.52%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF12325	TMF_TATA_bd	0.97
PF00067	p450	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
All Organisms	root	All Organisms	0.97 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
cellular organisms	root	All Organisms → cellular organisms	0.97 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.97 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.97 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.97 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.97 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.97 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.97 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.97 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.97 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.03 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.97 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002175|JGI20166J26741_11978828	Not Available	781
3300027891|Ga0209628_10043203	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	4285

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Category

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Type

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated
3300006226	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_100232032	3300001544	Termite Gut	MSDVAAYYVFVCALFPVQGGMWTHTQIHDMLPHHS*
JGI20163J15578_100367765	3300001544	Termite Gut	VTAYHVFVCALFXVQGGMWTAVPYLPALETTHTQIHDMLSHR*
JGI20163J15578_100389025	3300001544	Termite Gut	MSDVAAYHVLFPVQGVMWTPPIPALEKTHTQIHDMLPHHS*
JGI20163J15578_102999443	3300001544	Termite Gut	MSDAAAYHVLFPVQGGMCTGYSQSTYLPALETTHTQIHDMLPHRS*
JGI20163J15578_103554413	3300001544	Termite Gut	MSDVAAYHILFPVQGGMWTAVHIPHYTTQALIHDMLPHHSQ*
JGI20163J15578_104055872	3300001544	Termite Gut	MSDVAAYHILFVVQRGMWTGYSQFTYLSALQTIHDMLPHRS*
JGI20163J15578_108039081	3300001544	Termite Gut	MSDVAAYHVLECALFPVQGGMWTGYLPALETTHK*
JGI20163J15578_108268352	3300001544	Termite Gut	IMSDVAAYHVLFPVQGGMWTGYSQSTYLPALETTHTLIHDIYM*
JGI20165J26630_105724192	3300002125	Termite Gut	MNDVATYHVFLCVLFPVQGVMWTASTYLPALDFIFIH*
JGI20165J26630_105985991	3300002125	Termite Gut	MSDVAAYYVFVYALFPIQGRYVESTYLTALETTYTQIHDMLSHRS*
JGI20165J26630_106378672	3300002125	Termite Gut	MSDVAAYHVFVCALFPVQRGAVQSTYLSALETTHTQIHDML
JGI20165J26630_106689142	3300002125	Termite Gut	MSDVAAYVFVYAFPVQXGMWTGYSQSTYLPALETTHTQIHDMLSHRS*
JGI20164J26629_102621652	3300002127	Termite Gut	MSGVAAYHVLFPVQGGMWTGYXQSTYLPALETIHDMLPHRS*
JGI20164J26629_103636261	3300002127	Termite Gut	MSDVAAYNVLFPVHGGMWTGYSQSTYLHALQTIHDMLPHH
JGI20164J26629_104726902	3300002127	Termite Gut	MSDMAAYHVFIASPHIPALETTHTQIHDMLTHHT*
JGI20164J26629_105388851	3300002127	Termite Gut	GTPFNDDDSNTYLFPVQGGMWTGYSHSTYLPALETIHDMLSDHS*
JGI20166J26741_100217824	3300002175	Termite Gut	MSDVATYHVLFPVQGGMWSGYSQSTYLHALETTHTQIHDMLPHHS*
JGI20166J26741_100325616	3300002175	Termite Gut	MSDVAAYHVLFPVQVGMWPVPYLPALETTHTHTQTHDMLPHRS*
JGI20166J26741_100640902	3300002175	Termite Gut	MIDVAAYHVLFPVQGGMWTGYSQSTYLPALETIHD
JGI20166J26741_104216481	3300002175	Termite Gut	MSDVAAYHVWFPVQGGMWTAVQSTYRPALETIHDMLPHHS*
JGI20166J26741_108855472	3300002175	Termite Gut	VAAYHILFPVQGGMWTGYSQSTYLPALETTHTQIQDMLPHHL*
JGI20166J26741_114457651	3300002175	Termite Gut	MSDVTAYHVLFVVQGGMWAGYSQSTYLPALDTTHDMLPHHS*
JGI20166J26741_114484571	3300002175	Termite Gut	MSVVAAYRVFMYALFPVQGGMWTGYSQSTYLPALETTHTQIHDMLPQRS*
JGI20166J26741_114650054	3300002175	Termite Gut	MSNVAAYHVLFPVQGGMWTGYSQSTYLPALEHAVTIKS*
JGI20166J26741_114820431	3300002175	Termite Gut	MSDVATYLVLVCGLFPVQGGMWTGYSQSTYLPALETIHDMMPHHS*
JGI20166J26741_116020711	3300002175	Termite Gut	MSDVAAYHVLVCALFPVWGGMWTDYSQSTYLPALETIHDMLPHHS*
JGI20166J26741_116420221	3300002175	Termite Gut	MSDVAAYHVLTCALFTGAGGMWTGYSQSTYLPALETTHTQVHDMLPHHS*
JGI20166J26741_116542954	3300002175	Termite Gut	YFIIMSDVAAYHVLFVVQGGMWTGYSQSTYLPALQTIHDALPHRS*
JGI20166J26741_116722183	3300002175	Termite Gut	MSDVAAYHVLFPVKGGMSTGYSQSTYLPALETTHTQIHDMLPHYS*
JGI20166J26741_116925951	3300002175	Termite Gut	MSDVAAYHVLFPVQGGSQSTHIPALQTIHDMLPHHS*
JGI20166J26741_116974861	3300002175	Termite Gut	MSDVAAYHVFMCALFPVQGGMWTLFPVQGGMCESTYLPALETTHTQIHDMLPHHS*
JGI20166J26741_117945791	3300002175	Termite Gut	MSDVAAYHVLFPVQEGMWTGYRQSTYLPALETIHGMLPHHS*
JGI20166J26741_118768141	3300002175	Termite Gut	MSDAAAYRVLFPVQGVMWTVYSQYTYLPALETTHTQIHDTLLHHA*
JGI20166J26741_119210441	3300002175	Termite Gut	MSGVAVYHVLFPVQGGMWTGYSQSTYLPALETIHDIL
JGI20166J26741_119342397	3300002175	Termite Gut	MSDVAVYNVFVCALFPVQGGMWTAVHYLPALETTHTQIHDMLPHHS*
JGI20166J26741_119788282	3300002175	Termite Gut	MSDVAAYHVLFAVQVGMWTGYSQSTYLPALQTIHDMLPHHSY*
JGI20166J26741_122411602	3300002175	Termite Gut	MSDVAAYHILFPVQGGVWTAVQSTHLPALETIHDMLPHHS*
JGI20166J26741_122521341	3300002175	Termite Gut	MSDVAAYRVLFPVQGGTWTGYTQSTYLPALETIHDILPH
JGI20163J26743_103409971	3300002185	Termite Gut	MSDVAAYHVLFAVQGGVWTGYSQSTYLPALETIHDML
JGI20163J26743_103987111	3300002185	Termite Gut	MIDVAAYHVFVCALFPVQGGMWTGQSTYLPALETTHT
JGI20163J26743_107115951	3300002185	Termite Gut	SIIMSDVATYHVLFPVQGGMWSGYSQSTYLHALETTHTQIHDMLPHHS*
JGI20163J26743_107839821	3300002185	Termite Gut	IMSDVAAYHVLFPVQGGMWTGYSQSTYLPALETTHTHIHDMLPQHS*
JGI20163J26743_108058191	3300002185	Termite Gut	SDVAAYPVFVCALFPVQGGMWTASPHIPALETTHTQIQDMLPHHS*
JGI20163J26743_108706002	3300002185	Termite Gut	MSDVAAYHVLFVVQGGMWTDYSQSTYLPALQTIHDMLQHH
JGI20163J26743_109119272	3300002185	Termite Gut	MSLIIISDVAAYHVLFPVQGGMWTGYSQSTYLPALETI
JGI20163J26743_110032591	3300002185	Termite Gut	VSDVAAYHVLFPVQGVMWTGYSQSTYLPALETIHDMLPHRS
JGI20163J26743_111002292	3300002185	Termite Gut	VSDVAAYHVLVRTLFPVQGDVWTGYSQSTHLPALE
JGI20163J26743_111371901	3300002185	Termite Gut	SDVAAYHVLFPVQGGMWTGYTQSTYLPALETTHTQKHDMLPHH*
JGI20163J26743_111809292	3300002185	Termite Gut	MSDVATYLVLVCGLFPVQGGMWTGYSQSTYLPALET
JGI20163J26743_112360031	3300002185	Termite Gut	MIDVAAYRVFVCVLFPVQGGMWTGYSQSTYLPALETIHDML
JGI20163J26743_112437083	3300002185	Termite Gut	MSDVAAYHVFVCALFPVQEDSGLQSTYLPALETTHTQI
JGI20163J26743_112613652	3300002185	Termite Gut	MWKTIIRLYNVLNVLVCALFPVQGGMWTGYGIPALGTTHTLIHDMLPHHS*
JGI20163J26743_114590435	3300002185	Termite Gut	VAAYRVLFPVQGGTWTGQSTYHPALETTHTQIHDMLPHRT*
Ga0099364_103381414	3300006226	Termite Gut	MSVVAAYRIFVCALFLVQGGMWTGYRQSTYLPAPETTRNFS*
Ga0099364_104265951	3300006226	Termite Gut	VFVCTLFPVQGGMWTGYRQSTYLPALETTYKQIHAILPQHS*
Ga0099364_104590032	3300006226	Termite Gut	MSVVAAYHIFVCSLFLVQGGMWTGYSQFTYLPAPETKHTQIYDMLPQHS*
Ga0099364_105006941	3300006226	Termite Gut	MSVVAAYHVFVCMLFPVQGGMWTGQSTYLPALETT*
Ga0099364_108072031	3300006226	Termite Gut	MSVVAAYHMFVCALFLVQRGTWTGYNQSTYLSALETTHTQIYDT
Ga0209531_100675021	3300027558	Termite Gut	HMAAYNVFVCALFPVQGGMWTGYSQFTYLPALVTKHTQIHDMLPHRS
Ga0209531_100960711	3300027558	Termite Gut	AAYHAFPVQGGMWAGYSQPTYLLALEMHDMLPRRL
Ga0209531_101432811	3300027558	Termite Gut	MIDVAAYHVFVCALFPVQGGMWTGQSTYLPALETTHTQ
Ga0209628_100245651	3300027891	Termite Gut	YEYFITHIMSDVAAYHVFVCALFPMQGGMSIYLPALETMHTQKHDMLPHRL
Ga0209628_100432031	3300027891	Termite Gut	MSDVAAYHVLFPVQGGMWTGYTQSTYLPALETTHTQKHDMLPHH
Ga0209628_101317244	3300027891	Termite Gut	MIDVAAYRVFVCVLFPVQGGMWTGYSQSTYLPALET
Ga0209628_102447711	3300027891	Termite Gut	MSDVAAYHVFVCALFPVQGGMWTGYSQYTYLPALETIHDMLP
Ga0209628_105512301	3300027891	Termite Gut	MFDVAAYPVFVCALFAVQGDMWTGYSQSTYLPALQT
Ga0209628_105971391	3300027891	Termite Gut	MSGVAAYHVLFPVQGGMWTGYSQSTYLPALETIHDML
Ga0209628_106446042	3300027891	Termite Gut	MSDVATYLVLVCGLFPVQGGMWTGYSQSTYLPALETIH
Ga0209628_108028842	3300027891	Termite Gut	MSDVAAHRVLFPVQGGMWTGYSQSTYLPALETIHD
Ga0209628_112323461	3300027891	Termite Gut	MSDMAAYHVLQGGMWTGYSQSTYLPALETIHDMLP
Ga0209737_100211675	3300027904	Termite Gut	MSDVAAYHVFVCALFPYLPALETMHTQIHDMLPHH
Ga0209737_100763851	3300027904	Termite Gut	MSDVAAYHVFMCALFPVQGGMWTLFPVQGGMCESTYLPALETTHTQIHDMLPHHS
Ga0209737_101268283	3300027904	Termite Gut	MSDVAAYHVLFPAQGGMWTGYSQSTYLPALETIHDM
Ga0209737_101446791	3300027904	Termite Gut	VSDVAAYHVFVCALFPVQGGMWTGYGQSTYLPALETTHTQIHD
Ga0209737_104692832	3300027904	Termite Gut	ESSVIISDVAAYHILFPVQGGMWTGYSQSTYLPALETTHTQIQDMLPHHL
Ga0209737_104973021	3300027904	Termite Gut	MSDVAAYHVLFAVQGGMWTGYSQSTYLPALQTIHDMLPHR
Ga0209737_106761811	3300027904	Termite Gut	MSDVAAYHVLFPVQGGMWTGYSQSTYLPALETIHDMLP
Ga0209737_106830291	3300027904	Termite Gut	MINVAAYRVFVCALFPVQGGMWTGQSTYHLALETIRTRYAAT
Ga0209737_106902511	3300027904	Termite Gut	MSDVAAYHVFVCTLFPLQGGVWIGCSQSTHLPAMETT
Ga0209737_106932762	3300027904	Termite Gut	MFDVAAYPVFVCALFAVQGDMWTGYSQSTYLPALQTTHTQI
Ga0209737_107609291	3300027904	Termite Gut	MSDVATYLVLVCGLFPVQGGMWTGYSQSTYLPALETIHDM
Ga0209737_108820981	3300027904	Termite Gut	MSDVAAYHVFVCALFPVQGGMWTAQQSTYLPALETTHTQIH
Ga0209629_100020671	3300027984	Termite Gut	MSDVAAYHVLVCVLFPVQGGMWTGQTTYLPALETIHDMLPHHS
Ga0209629_100296121	3300027984	Termite Gut	MSDVEAYHVLFAVQGDMWTGYSQSTYLPALQTIHDMLPHHS
Ga0209629_100441711	3300027984	Termite Gut	MIDVAAYRVFVCVLFPVQGGMWTGYSQSTYLPALETIHDM
Ga0209629_100449241	3300027984	Termite Gut	MSDVEAYHVLFPVQGGMWTGYSQSTYLPALETIHDMLPHHS
Ga0209629_100545121	3300027984	Termite Gut	MIDVAAYHVFVCALFPVQGGMWTGQSTYLPALETTHTQIHDM
Ga0209629_101147401	3300027984	Termite Gut	MRDVAAYHVLFPAQGGMWTGYSQSTYLPALETIHDM
Ga0209629_101427663	3300027984	Termite Gut	MSDVAAYHVFVCALFPVQRGAVQSTYLSALETTHTQIHDMLPH
Ga0209629_102383791	3300027984	Termite Gut	YEYFIIMSDVAAYHVLFPVQGGMWTGYSQSTYLLALETLHDMLPHRS
Ga0209629_102455581	3300027984	Termite Gut	MSDVAAYHVLFPVQGGMWTGYSQSTYLPALETTHTLIHDIYM
Ga0209629_102733311	3300027984	Termite Gut	MSDVAAYHVFVCALFPVQGGMWTGYSQSTYLPALETTHTQI
Ga0209629_103163032	3300027984	Termite Gut	MSVVAAYHVYVCALFPVQGGMWTGYSQSTYLPALETIHDMLPH
Ga0209629_103308171	3300027984	Termite Gut	MSDVAAYHVLFPVQGGMWTGYSQSTYLPALETIHDMLQH
Ga0209629_103358283	3300027984	Termite Gut	MSDVAAYHVFVCALFPVQGGMWTAQQSTYLPALETTHTQIHDM
Ga0209629_103423681	3300027984	Termite Gut	MSDVAAYHVFVCALFPVQGGMWTGHSQSTYLPALETTHTQIHDMLPHHS
Ga0209629_104205781	3300027984	Termite Gut	MSDVAAYHVLFPVQGGMWTGYSQSTYLPALETIHDM
Ga0209629_104232161	3300027984	Termite Gut	MSDVAAYRVLVCALFPVLGGMWTASTYLPALETTHT
Ga0209629_104349101	3300027984	Termite Gut	MSDVAAHHVLFVVQGGMWTGYSQSTYLPALQTIHDMLPH
Ga0209629_104630651	3300027984	Termite Gut	MIDVATYHVLFPVQGGMWTGYSQSTYLPALETIHDMLP
Ga0209629_106225661	3300027984	Termite Gut	MSDVAAHRVLFPVQGGMWTGYSQSTYLPALETIHDML
Ga0209629_108804011	3300027984	Termite Gut	MRDVAAYHVLFPVQGGVWSDYSQSTYLPALETIHDMLPH
Ga0209629_109035621	3300027984	Termite Gut	MSDVATYHVLFPVQGGMWTGYSQSTYLPALETIHDMLQ