Metagenome Family F099475

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099475
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	62 residues
Representative Sequence	HHGANWTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVILNPILDSSGNPLR
Number of Associated Samples	85
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.85 %
% of genes near scaffold ends (potentially truncated)	95.15 %
% of genes from short scaffolds (< 2000 bps)	91.26 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere (9.709 % of family members)
Environment Ontology (ENVO)	Unclassified (53.398 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.223 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.58% Coil/Unstructured: 82.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07690	MFS_1	6.80
PF08811	DUF1800	4.85
PF01165	Ribosomal_S21	3.88
PF00034	Cytochrom_C	2.91
PF01894	UPF0047	1.94
PF04519	Bactofilin	1.94
PF07508	Recombinase	1.94
PF12804	NTP_transf_3	0.97
PF00561	Abhydrolase_1	0.97
PF00248	Aldo_ket_red	0.97
PF01272	GreA_GreB	0.97
PF04909	Amidohydro_2	0.97
PF13358	DDE_3	0.97
PF00437	T2SSE	0.97
PF02687	FtsX	0.97
PF01548	DEDD_Tnp_IS110	0.97
PF07883	Cupin_2	0.97
PF13340	DUF4096	0.97
PF00849	PseudoU_synth_2	0.97
PF00589	Phage_integrase	0.97
PF13360	PQQ_2	0.97
PF01435	Peptidase_M48	0.97
PF02371	Transposase_20	0.97
PF01828	Peptidase_A4	0.97
PF04324	Fer2_BFD	0.97
PF04454	Linocin_M18	0.97
PF03050	DDE_Tnp_IS66	0.97
PF11700	ATG22	0.97
PF13432	TPR_16	0.97
PF00196	GerE	0.97
PF00756	Esterase	0.97
PF00072	Response_reg	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	4.85
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	3.88
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	1.94
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.94
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.94
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.94
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.97
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.97
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.97
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.71 %
Unclassified	root	N/A	1.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	37.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.94 %
Unclassified	root	N/A	1.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.97 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	35.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.85 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	1.94 %
Unclassified	root	N/A	1.94 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.97 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.97 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.97 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	33.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.94 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	1.94 %
Unclassified	root	N/A	1.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	33.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.94 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.94 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	1.94 %
Unclassified	root	N/A	1.94 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.97 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.97 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	33.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.56 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	1.94 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.94 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	1.94 %
Unclassified	root	N/A	1.94 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.97 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.97 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102115530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	632	Open in IMG/M
3300005334\|Ga0068869_101704017	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005345\|Ga0070692_10679867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005347\|Ga0070668_101253659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	673	Open in IMG/M
3300005459\|Ga0068867_102259527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005530\|Ga0070679_101719434	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005535\|Ga0070684_102307338	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005536\|Ga0070697_100524108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1038	Open in IMG/M
3300005538\|Ga0070731_10947963	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300005539\|Ga0068853_100115268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2391	Open in IMG/M
3300005539\|Ga0068853_100622988	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005543\|Ga0070672_101908557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	534	Open in IMG/M
3300005546\|Ga0070696_101232310	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300005563\|Ga0068855_100421797	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300005563\|Ga0068855_102159725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	560	Open in IMG/M
3300005586\|Ga0066691_10338963	Not Available	890	Open in IMG/M
3300005614\|Ga0068856_101785412	Not Available	627	Open in IMG/M
3300005618\|Ga0068864_101886564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300005842\|Ga0068858_101525680	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300005842\|Ga0068858_101773269	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005921\|Ga0070766_10705910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	683	Open in IMG/M
3300006057\|Ga0075026_100800997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	571	Open in IMG/M
3300006237\|Ga0097621_100181801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1817	Open in IMG/M
3300006755\|Ga0079222_12088580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300009098\|Ga0105245_12157863	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009100\|Ga0075418_12457507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	569	Open in IMG/M
3300009148\|Ga0105243_11839465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300009148\|Ga0105243_12067790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	605	Open in IMG/M
3300009174\|Ga0105241_10124701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2079	Open in IMG/M
3300009176\|Ga0105242_11101998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300009177\|Ga0105248_10266389	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300009177\|Ga0105248_11005806	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300009525\|Ga0116220_10182111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	907	Open in IMG/M
3300009545\|Ga0105237_12015525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	586	Open in IMG/M
3300009839\|Ga0116223_10350394	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300010373\|Ga0134128_10096862	All Organisms → cellular organisms → Bacteria → Proteobacteria	3354	Open in IMG/M
3300010375\|Ga0105239_10228381	All Organisms → cellular organisms → Bacteria → Acidobacteria	2088	Open in IMG/M
3300010379\|Ga0136449_103381778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	611	Open in IMG/M
3300010397\|Ga0134124_11599252	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010397\|Ga0134124_11963597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300011119\|Ga0105246_10898387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	794	Open in IMG/M
3300011120\|Ga0150983_10030954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	643	Open in IMG/M
3300011120\|Ga0150983_14676876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300011120\|Ga0150983_15791643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	562	Open in IMG/M
3300012019\|Ga0120139_1210050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	517	Open in IMG/M
3300012208\|Ga0137376_11810473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	501	Open in IMG/M
3300012210\|Ga0137378_10051685	All Organisms → cellular organisms → Bacteria	3700	Open in IMG/M
3300012285\|Ga0137370_10364490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300012363\|Ga0137390_10636620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1032	Open in IMG/M
3300012363\|Ga0137390_10802454	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012923\|Ga0137359_11657481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012929\|Ga0137404_10072947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2700	Open in IMG/M
3300012958\|Ga0164299_11264050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	562	Open in IMG/M
3300013102\|Ga0157371_10583734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300013105\|Ga0157369_10737618	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300013297\|Ga0157378_12425106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	576	Open in IMG/M
3300013307\|Ga0157372_12378752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300014166\|Ga0134079_10652727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	530	Open in IMG/M
3300014968\|Ga0157379_12289711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	538	Open in IMG/M
3300014969\|Ga0157376_10654254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300014969\|Ga0157376_12298216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	578	Open in IMG/M
3300014969\|Ga0157376_12872521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	521	Open in IMG/M
3300015241\|Ga0137418_11042302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	587	Open in IMG/M
3300020583\|Ga0210401_11100447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	653	Open in IMG/M
3300021432\|Ga0210384_10413406	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300021475\|Ga0210392_10451930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	942	Open in IMG/M
3300022309\|Ga0224510_10865215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	511	Open in IMG/M
3300025862\|Ga0209483_1175982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	870	Open in IMG/M
3300025906\|Ga0207699_11335885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	530	Open in IMG/M
3300025911\|Ga0207654_10190485	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300025914\|Ga0207671_10085506	All Organisms → cellular organisms → Bacteria → Acidobacteria	2370	Open in IMG/M
3300025914\|Ga0207671_10799327	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300025927\|Ga0207687_10752326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	829	Open in IMG/M
3300025927\|Ga0207687_10777830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	815	Open in IMG/M
3300025934\|Ga0207686_10057376	All Organisms → cellular organisms → Bacteria → Acidobacteria	2451	Open in IMG/M
3300025934\|Ga0207686_10378077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300025934\|Ga0207686_10497376	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300025939\|Ga0207665_10378227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1074	Open in IMG/M
3300025940\|Ga0207691_11692747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300026035\|Ga0207703_10299063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1467	Open in IMG/M
3300026041\|Ga0207639_10418437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1211	Open in IMG/M
3300026089\|Ga0207648_10360451	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300026089\|Ga0207648_11202339	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300027629\|Ga0209422_1159661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	503	Open in IMG/M
3300027862\|Ga0209701_10441230	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027905\|Ga0209415_10668552	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027911\|Ga0209698_10229714	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300029883\|Ga0311327_10846492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	531	Open in IMG/M
3300029999\|Ga0311339_11589476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	578	Open in IMG/M
3300031057\|Ga0170834_112978227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	646	Open in IMG/M
3300031122\|Ga0170822_14422751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	569	Open in IMG/M
3300031231\|Ga0170824_118495398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	641	Open in IMG/M
3300031232\|Ga0302323_102826073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	555	Open in IMG/M
3300031236\|Ga0302324_100950327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1175	Open in IMG/M
3300031236\|Ga0302324_102472110	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	635	Open in IMG/M
3300031474\|Ga0170818_107154164	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031525\|Ga0302326_10921912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1239	Open in IMG/M
3300031708\|Ga0310686_112555642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	527	Open in IMG/M
3300032018\|Ga0315272_10015321	All Organisms → cellular organisms → Bacteria	3499	Open in IMG/M
3300032180\|Ga0307471_101012623	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300032180\|Ga0307471_103530898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	553	Open in IMG/M
3300032421\|Ga0310812_10485333	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300034282\|Ga0370492_0425638	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.31%
Host-Associated	Host-Associated	43.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.43%
Plants	Host-Associated → Plants	43.69%
Aquatic	Environmental → Aquatic	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.59%
Peat	Environmental → Terrestrial → Peat	5.83%
Sediment	Environmental → Aquatic → Sediment	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Marine	Environmental → Aquatic → Marine	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.59%
Loam	Environmental → Terrestrial → Soil → Loam	11.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Sediment	Environmental → Aquatic → Marine → Sediment	0.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.97%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1021155302	3300000955	Soil	AEYDLEIYEENPEDHELHGANWTPGAKKIEGMVVGELPIRKDLRLLTEEGYSANFYLRDSFGTVVILDAMLDSSGKPVH*
Ga0068869_1017040171	3300005334	Miscanthus Rhizosphere	DHEHHGANWTPGAKKIEGTVVGELPIRKDLRLVTEEGYAVNFYLRDSFGSVVIVDPMLDTSGNPVR*
Ga0070692_106798671	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	NPEDHEHHGANWAPGTQKIEGTVVGELPIRKDLRLVTEEGYAVNFYLRDSFGSAVVLDAMLDSSGNPVR*
Ga0070668_1012536592	3300005347	Switchgrass Rhizosphere	GTVVGELPIRKDLRLVTEEGYAVNFYLRDSFGTVVILDALLDGSGNPVR*
Ga0068867_1022595272	3300005459	Miscanthus Rhizosphere	EHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0070679_1017194341	3300005530	Corn Rhizosphere	VGALPIRKDLQLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPLR*
Ga0070684_1023073381	3300005535	Corn Rhizosphere	TVIGELPIRKDLRLLTEEGYAVKFYLRDSFGSVVISDPMLDSSGNPVR*
Ga0070697_1005241082	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PEDHQHHGANWTPGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVISDPILDSSGNPVR*
Ga0070731_109479631	3300005538	Surface Soil	VVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVIVDPMLDSSGNPVR*
Ga0068853_1001152685	3300005539	Corn Rhizosphere	HKIEGTVVGDLPIRKDLRLLTEEGYSVNFYLRDSFGSVVVSDPILDSNGNPVR*
Ga0068853_1006229881	3300005539	Corn Rhizosphere	EGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0070672_1019085572	3300005543	Miscanthus Rhizosphere	PGAKKIEGTVVGELPIRKDLRLLTEEGYSLNFYLRDSFGTVVILSPMLDSSGNPVH*
Ga0070696_1012323102	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AEYDLEIYEENPEDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0068855_1004217971	3300005563	Corn Rhizosphere	KIEGTVVGELPLRKDLKLITEEGYAVNFYLRDSFGSVVVVDPILDSSGNRVH*
Ga0068855_1021597252	3300005563	Corn Rhizosphere	YEENPEDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0066691_103389631	3300005586	Soil	LEIYEENPEDHEHHGANWTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVSFYLRDSFGSVMI*
Ga0068856_1017854122	3300005614	Corn Rhizosphere	EGTVVGELPIRKDLRLVTEEGFALSFYLRDSFGSIVTLEPMLDSAGKPV*
Ga0068864_1018865641	3300005618	Switchgrass Rhizosphere	LEDHEHHGANYTPGARKIEGTVVGELPIRKDLSLLTEEGYSVNFYLRDSFGTVVILDAMLDSSGNPVH*
Ga0068858_1015256802	3300005842	Switchgrass Rhizosphere	EIYEENPEDHEHHGANWTPGEKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGTVVILDPMLDSSGNPVH*
Ga0068858_1017732691	3300005842	Switchgrass Rhizosphere	VGELPIRKDLRLVTEEGYAVNFYLRDSFGSVVIVDPMLDTSGNPVR*
Ga0070766_107059102	3300005921	Soil	HGANWTPGARKIEGTVVGELPIRRDLRLLTEEGYSLNFYLRDSFGSIVILDPMLDSSGNPVS*
Ga0075026_1008009972	3300006057	Watersheds	GTVVGELPIRKDLKLVTEEGYALSFYLRDGFGSIVILEPLLDSTGNPVC*
Ga0097621_1001818011	3300006237	Miscanthus Rhizosphere	LEIYEENPEDHEHHGANYTPGARKIEGTVVGALPIRKDLRLLTEEGYSVKFYLRDSFGTVVIVESMLDSSGNPVH*
Ga0079222_120885802	3300006755	Agricultural Soil	PGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0105245_121578631	3300009098	Miscanthus Rhizosphere	HHGANWTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPLR*
Ga0075418_124575071	3300009100	Populus Rhizosphere	NPEDHEHHGANWTPGAKKVEGTVVGELPIRKDLRLVTEEGYSLTFYLRDSFGSVVMLVPMLDSTGRPVN*
Ga0105243_118394652	3300009148	Miscanthus Rhizosphere	AEYDLEIYEENPEDHEHHGANWTPGAKKVEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPVL*
Ga0105243_120677902	3300009148	Miscanthus Rhizosphere	AKKIEGTVVGELPIRKDIRLLTEEGYSLNFYLRDSFGTVVILSPMLDSSGNPVH*
Ga0105241_101247013	3300009174	Corn Rhizosphere	WTPNAKKIEGTVVGELPIRKDLRLVTEEGYAVSFYLRDSFGSAVILDAMLDSSGNPVR*
Ga0105242_111019981	3300009176	Miscanthus Rhizosphere	VVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0105248_102663894	3300009177	Switchgrass Rhizosphere	VGALPIRKDLRLLTEEGYSVNFYLRDSFGSVVISNPILDSSGNPLR*
Ga0105248_110058061	3300009177	Switchgrass Rhizosphere	GAKKIEGTVVGELPIRKDLRLVTEEGYAVNFYLRDSFGSVVIVDPMLDTSGNPVR*
Ga0116220_101821112	3300009525	Peatlands Soil	DIAEYDLEIYEENPEDHQHHGANWTSGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVISDPILDSSGNPVR*
Ga0105237_120155252	3300009545	Corn Rhizosphere	VVGELPIRKDLRLVTEEGYAVNFYLRDSFGTVVILDPLLDGSGNPVR*
Ga0116223_103503942	3300009839	Peatlands Soil	LEIYEENPDDHEHHGANWTPNAKKIEGTVVGVLPIRKDLRLVTEEGYQLSFYLRDSFGSVVILESMLDSTGKPVC*
Ga0134128_100968621	3300010373	Terrestrial Soil	DLEIYEENPDDHEHHGANWTPGAKKIEGTVVGALPIRKDLRLLTEEGYSVDFYLRDSFGSVVILNPILDSSGNPLR*
Ga0105239_102283811	3300010375	Corn Rhizosphere	HHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0136449_1033817781	3300010379	Peatlands Soil	MPESSRQLEIYEENPEDHEHHGANWAPGAKKIVGTVVGALPIRKDLRLLTEEGYSVDFYLRDSFGSVVILNPMLDSSGNPVH*
Ga0134124_115992522	3300010397	Terrestrial Soil	ENPDDHERHGANWTPGARKIEGTVVGELPIRKDLRLVTEEGYSLSFYLRDSFGSVVVSDPMLDSAGNPVR*
Ga0134124_119635972	3300010397	Terrestrial Soil	YDLEIYEENPEDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0105246_108983872	3300011119	Miscanthus Rhizosphere	NPEDHEHHLANWTPGAKKIEGTVVGELPIRKDLRLVTEEGYAVSFYLRDSFGSIVILGPMLDGTGKPVC*
Ga0150983_100309541	3300011120	Forest Soil	EDHQHHGANWTPGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVILDPILDSSGNPVR*
Ga0150983_146768762	3300011120	Forest Soil	VVGALPIRQDLSLVTEEGYSLSFYLRDSFGSVVIMGPMLDSTGNPVRWGQQS*
Ga0150983_157916431	3300011120	Forest Soil	DLEIYEENPEDHEHHGANWTPGAKKIEGTVVGELPIRKDLRLVTEEGYSLSFYLRDSFGSVVVLDPMLDGTGNPVR*
Ga0120139_12100502	3300012019	Permafrost	EGTVVGELPIRKDLRLLTEEGYSVKFYLRDSFGSVVILDTMLDSNGNPVG*
Ga0137376_118104731	3300012208	Vadose Zone Soil	HHGANWAPGSKKIEGSVVGELPIRKDLRLLTEEGYSVKFYLRDSFGSVVILDPMLDSNGNPVR*
Ga0137378_100516854	3300012210	Vadose Zone Soil	EYDLEIYEENPEDHELHGANWTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGTVVILDAMLDSSGKPVH*
Ga0137370_103644901	3300012285	Vadose Zone Soil	GANWTPGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVILDPILDSSGNPVR*
Ga0137390_106366202	3300012363	Vadose Zone Soil	MISRSTRKNPEDHQHHGANWTPGAEKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDTFGSVVILDPILDSSGNPVR*
Ga0137390_108024541	3300012363	Vadose Zone Soil	LGAKKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDSFGSVVILEPMLDGSGNPVR*
Ga0137359_116574811	3300012923	Vadose Zone Soil	VVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVGISDPILDSSGN
Ga0137404_100729475	3300012929	Vadose Zone Soil	VVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVILDPILDSSGNPVR*
Ga0164299_112640502	3300012958	Soil	TPGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVISDPILDSSGNPVR*
Ga0157371_105837342	3300013102	Corn Rhizosphere	EYDLEIYEENPEDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0157369_107376181	3300013105	Corn Rhizosphere	PNAKKIEGTVVVELPIRKDLRLVTEEGYALSFYLRDSFGSIVILGPMLDSTGKPVG*
Ga0157378_124251062	3300013297	Miscanthus Rhizosphere	EYDLEIYEENTEDHEHHGANWTPGAKKVEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPVL*
Ga0157372_123787521	3300013307	Corn Rhizosphere	IYEENPEDHEHHGANWAPGTQKIEGTVVGELPIRKDLRLVTEEGYAVNFYLRDSFGSAVILDAMLDSSGNPVR*
Ga0134079_106527271	3300014166	Grasslands Soil	IYEENPEDHQHHGANWTPGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVILDPILDSSGNPVR*
Ga0157379_122897111	3300014968	Switchgrass Rhizosphere	HHGANWTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVILNPILDSSGNPLR*
Ga0157376_106542542	3300014969	Miscanthus Rhizosphere	HGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS*
Ga0157376_122982162	3300014969	Miscanthus Rhizosphere	GAKKIEGTVVGELPIRKDLRLLTEEDYSVNFYLRDSFGSVVILNPILDSSGNPLR*
Ga0157376_128725211	3300014969	Miscanthus Rhizosphere	NPEDHEHHGANYTPGAKKIEGTVVGELPVRKDLRLLTEEGYSVNFYLRDRFGTVVILDPMLDSSGNPVH*
Ga0137418_110423021	3300015241	Vadose Zone Soil	GLVVAEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVIVGPMLDSSGNPVR*
Ga0210401_111004471	3300020583	Soil	YEENPEDHEHHGANWTPGANKIEGTVVGKLPIRKDLRLLTEEGYSVKFYLRDSFGSVVISDPMLDSKGNPVR
Ga0210384_104134063	3300021432	Soil	EGTVVGKLPIRKDLRLLTEEGYSVNFYLRDSFGSVVISNPILDSSGNPLR
Ga0210392_104519301	3300021475	Soil	IAEYDLEIYEENPEDHEHHGANWTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDSFGSAVILDPILDSSGDPVR
Ga0224510_108652151	3300022309	Sediment	EYDLEIYEENPDDHEHHGANWIPGTKKIEGTVVGQLPIRKALRLLTEEGYSVKFFLRDSFGTVVISDPMLDSSGAPVR
Ga0209483_11759821	3300025862	Arctic Peat Soil	DHEHHGGNWTPGEKKIEGTVVGDLPIRKDLRLLTEEGYSLNFYLRDSFGSVVILDPMLDSYGNPVR
Ga0207699_113358852	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	NWTPGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVISDPILDSSGNPVR
Ga0207654_101904851	3300025911	Corn Rhizosphere	PGAKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPLR
Ga0207671_100855061	3300025914	Corn Rhizosphere	GDLPIRKDLRLLTEEGYSVNFYLRDSFGSVVVSDPILDSNGNPVR
Ga0207671_107993272	3300025914	Corn Rhizosphere	QKIEGTVVGELPLRKDLKLITEEGYAVNFYLRDSFGSVVVVDPILDSSGNRVH
Ga0207687_107523262	3300025927	Miscanthus Rhizosphere	AEYDLEIYEENPEDHEHHGANWTPGAKKVEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPVL
Ga0207687_107778301	3300025927	Miscanthus Rhizosphere	KKIEGTVVGELPIRKDLRLVTEEGFALSFYLRDSFGSIVTLEPMLDSAGKPV
Ga0207686_100573763	3300025934	Miscanthus Rhizosphere	SFRIGNAPKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPV
Ga0207686_103780771	3300025934	Miscanthus Rhizosphere	NPEDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS
Ga0207686_104973761	3300025934	Miscanthus Rhizosphere	KIEGTVVGELPIRKDLRLVTEEGYAVNFYLRDSFGSVVIVDPMLDTSGNPVR
Ga0207665_103782273	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVILDPILDSSGNPVR
Ga0207691_116927471	3300025940	Miscanthus Rhizosphere	EGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS
Ga0207703_102990632	3300026035	Switchgrass Rhizosphere	EHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS
Ga0207639_104184371	3300026041	Corn Rhizosphere	WTPGAHKIEGTVVGDLPIRKDLRLLTEEGYSVNFYLRDSFGSVVVSDPILDSNGNPVR
Ga0207648_103604511	3300026089	Miscanthus Rhizosphere	EENPEDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDPILDSSGKPVS
Ga0207648_112023391	3300026089	Miscanthus Rhizosphere	EDHEHHGGNWTPGAKKVEGTVVGALPIRKDLRLLTEEGYAVNFYLRDSFGSVVILDHILDSSGNPVT
Ga0209422_11596611	3300027629	Forest Soil	KIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVIVDPMLDSSGNPVR
Ga0209701_104412302	3300027862	Vadose Zone Soil	PGAEKIEGTVVGELPIRKDLRLLTEEGYSVKFYLRDTFGSVVILDPILDSSGNPVR
Ga0209415_106685522	3300027905	Peatlands Soil	DHEHHGANWTPNAKKIEGTVVGVLPIRKDLRLVTEEGYQLSFYLRDSFGSVVILESMLDSTGKPVC
Ga0209698_102297141	3300027911	Watersheds	GTVVGELPIRKDLSLLTEEGYRLNFYLKDGFGSVVVLDPMRDSSGNLVR
Ga0311327_108464921	3300029883	Bog	VVGALPIRKDLKLFTEEGYSVKFYLRDSFGSVVISDPMLDSNGKPVA
Ga0311339_115894761	3300029999	Palsa	TPGAKKIEGTVVAELPIRKDLGLVTEEGYSLSFYLRDSFGSVVVLEPMLDSTGNPVL
Ga0170834_1129782272	3300031057	Forest Soil	LEIYEENPEDHEHHGANWTPGAKKVEGTVVGELPIRKDLRLLTEEGYSVDFYLRDSFGSVVISNTILDSSGNPLR
Ga0170822_144227512	3300031122	Forest Soil	TYEENPEAHEHHGADWTPGVKKIESTVVGALPIRKDLRLLTEEGYSVDFYLRDSFGSVVISNPILDSSGNPLR
Ga0170824_1184953982	3300031231	Forest Soil	EENPEDHEHHGANWTPGAKKVEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVILNPILDSSGNPLR
Ga0302323_1028260732	3300031232	Fen	PDDHERHGDHWAPGAKIEGTVEGELPIRKDLRLVTEEGYSVKFYLRDTFGTVAISDPILDSSGKPLQ
Ga0302324_1009503272	3300031236	Palsa	MEPNWTPGAKKIEGTVVGELPIRKDLRLVTEEGYSLSFYLRDSFGSVVVLEPMLDSTGNPVL
Ga0302324_1024721102	3300031236	Palsa	GTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVILDPILDSRGNPVP
Ga0170818_1071541642	3300031474	Forest Soil	VGKLPIRKDLRLVTEEGYAVKFYLRDSFGSVVILDPMLDSSGNPVR
Ga0302326_109219122	3300031525	Palsa	NWTPGAKKIEGTVVGELPIRKDLRLVTEEGYSLSFYLRDSFGSVVVLEPMLDSTGNPVL
Ga0310686_1125556421	3300031708	Soil	PGAKKIEGTVVGELPIRKDLRLLTEEGYSVDFYLRDCFGSVVILNPIMDSNGNPLR
Ga0315272_100153215	3300032018	Sediment	EGTVVGELPIRKDLRLVTEEGYSLKFYLRDSFGSVVISEPMLDSNGNPVR
Ga0307471_1010126231	3300032180	Hardwood Forest Soil	AKKIEGTVVGKLPIRKDLRLLTEEGYSVNFYLRDSFGSVVIVDPMLDSSGNPVH
Ga0307471_1035308981	3300032180	Hardwood Forest Soil	PEDHEYHGANWTLGAKKIEGTVIGELPIRKDLRLLTEEGYSVKFYLRDSFGSVVILEPMLDPSGNPVR
Ga0310812_104853332	3300032421	Soil	WTPGAKKIEGTVVGELPIRKDLRLLTEEGYSVNFYLRDSFGSVVVLNPILDSSGNPLR
Ga0370492_0425638_395_538	3300034282	Untreated Peat Soil	VVGRLPIRKDLRLVTEEGYSVKFFLRDSFGTVAILDPMLDSSGNPMR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences