Metagenome / Metatranscriptome Family F099448

Basic Information
Family ID	F099448
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	78 residues
Representative Sequence	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG
Number of Associated Samples	62
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.52 %
% of genes near scaffold ends (potentially truncated)	20.39 %
% of genes from short scaffolds (< 2000 bps)	83.50 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (77.670 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (34.952 % of family members)
Environment Ontology (ENVO)	Unclassified (92.233 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.379 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1LPaug09P26500mDRAFT_10250871 2LP_A_09_P20_500DRAFT_10509192 3JGI26238J51125_10451972 4JGI26382J51730_10903532 5Ga0066380_102904172 6Ga0066368_101057792 7Ga0066375_100492412 8Ga0068504_11093341 9Ga0068504_11093362 10Ga0068504_11093372 11Ga0068469_12095862 12Ga0068469_12352592 13Ga0068470_11499203 14Ga0068479_11275842 15Ga0068471_13158703 16Ga0068471_16261686 17Ga0068471_16264971 18Ga0068471_16279753 19Ga0068471_16294945 20Ga0068478_12816132 21Ga0068472_104826042 22Ga0068472_105506242 23Ga0068472_106710982 24Ga0068472_110585811 25Ga0068501_11548841 26Ga0068477_11820353 27Ga0068477_14645723 28Ga0068502_11276943 29Ga0068502_11698912 30Ga0068502_16887023 31Ga0068482_11868912 32Ga0068482_11868922 33Ga0068482_12166092 34Ga0068482_13080052 35Ga0068482_14943932 36Ga0068481_11315794 37Ga0068481_15116143 38Ga0068481_15180082 39Ga0068481_15233062 40Ga0068503_104587852 41Ga0068503_104778172 42Ga0068503_104778181 43Ga0068503_105205863 44Ga0068503_105223331 45Ga0068503_105456843 46Ga0068503_105465502 47Ga0068493_102595652 48Ga0068493_102629042 49Ga0066372_100673592 50Ga0066372_101348192 51Ga0066372_101939413 52Ga0066372_104462772 53Ga0105019_10279923 54Ga0105020_12914603 55Ga0114996_106921052 56Ga0114993_100663772 57Ga0105173_10167993 58Ga0181432_10665781 59Ga0181432_11192561 60Ga0211656_101839793 61Ga0211646_100904403 62Ga0211646_100953872 63Ga0211646_101285774 64Ga0211623_101871033 65Ga0211553_100734042 66Ga0211536_104040402 67Ga0206684_10564533 68Ga0206695_15181292 69Ga0206680_101639003 70Ga0206681_102174882 71Ga0206681_102935112 72Ga0206681_103627971 73Ga0226832_101339062 74Ga0232646_10160193 75Ga0209041_10919952 76Ga0209657_10040445 77Ga0209667_10465451 78Ga0208750_10929421 79Ga0209753_11533902 80Ga0209432_11176482 81Ga0209019_10209302 82Ga0209019_10994642 83Ga0209752_10212282 84Ga0209752_10214592 85Ga0209228_10334691 86Ga0209089_105008702 87Ga0257108_12289151 88Ga0257107_10110696 89Ga0257121_12012033 90Ga0257109_11302882 91Ga0257112_101691653 92Ga0257112_102314042 93Ga0302118_100592203 94Ga0310124_102414343 95Ga0315319_105149463 96Ga0315318_105346841 97Ga0315316_107246621 98Ga0315327_104820242 99Ga0315329_101706052 100Ga0315329_102898203 101Ga0310345_112219161 102Ga0310345_114526412 103Ga0310345_116685683
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1LPaug09P26500mDRAFT_10250871 2Ga0066375_100492412 3Ga0068469_12352592 4Ga0068472_110585811 5Ga0068503_104587852 6Ga0209228_10334691
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1LPaug09P26500mDRAFT_10250871 2Ga0066375_100492412 3Ga0068469_12352592 4Ga0068472_110585811 5Ga0068503_104587852 6Ga0209228_10334691
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.79% β-sheet: 0.00% Coil/Unstructured: 28.21%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07230	Portal_Gp20	57.28
PF03420	Peptidase_S77	8.74
PF04984	Phage_sheath_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.97

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	22.33 %
Unclassified	root	N/A	77.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.67 %
Viruses	superkingdom	All Organisms → Viruses	22.33 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.56 %
Unclassified	root	N/A	77.67 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.56 %
Unclassified	root	N/A	77.67 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.56 %
Unclassified	root	N/A	77.67 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.85 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.56 %
Unclassified	root	N/A	77.67 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.56 %
Unclassified	root	N/A	77.67 %

Name	Rank	Taxonomy	Distribution
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.56 %
Unclassified	root	N/A	77.67 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000247\|LPaug09P26500mDRAFT_1025087	Not Available	800	Open in IMG/M
3300000260\|LP_A_09_P20_500DRAFT_1050919	Not Available	516	Open in IMG/M
3300003478\|JGI26238J51125_1045197	Not Available	919	Open in IMG/M
3300003601\|JGI26382J51730_1090353	Not Available	607	Open in IMG/M
3300005948\|Ga0066380_10290417	Not Available	502	Open in IMG/M
3300006002\|Ga0066368_10105779	Not Available	968	Open in IMG/M
3300006019\|Ga0066375_10049241	All Organisms → Viruses → Predicted Viral	1418	Open in IMG/M
3300006304\|Ga0068504_1109334	Not Available	573	Open in IMG/M
3300006304\|Ga0068504_1109336	Not Available	639	Open in IMG/M
3300006304\|Ga0068504_1109337	Not Available	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.94%
Inlet	Environmental → Aquatic → Marine → Inlet	0.97%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.53%
Oceanic	Environmental → Aquatic → Marine → Oceanic	70.87%
Strait	Environmental → Aquatic → Marine → Strait	1.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.80%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	34.95%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.97%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	6.80%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	29.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	15.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.97%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.97%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	34.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.45%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	6.80%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.80%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.83%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.85%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.94%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.97%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.97%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	10.68%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.91%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.97%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000247	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 500m	Environmental	Open in IMG/M
3300000260	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300003601	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M

Showing 1 to 10 of 62 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug09P26500mDRAFT_10250871	3300000247	Marine	MMKTSKPYKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDKQVKQWIKDKSLTDDLLVXAIKNVMKERIKNG*
LP_A_09_P20_500DRAFT_10509192	3300000260	Marine	MKTSKPYKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDKQVKQWIKDKSLTDDLLVGAIKNVMKERIKNG*
JGI26238J51125_10451972	3300003478	Marine	MRTSKPHKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNVIKNVMKERIKNG*
JGI26382J51730_10903532	3300003601	Marine	MMRTSKPHKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNVIKNVMKERIKNG*
Ga0066380_102904172	3300005948	Marine	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDMLEKPELDVVNESDKQVKQWIKDKTLTDDLLVNAIKNVMKERVKNG*
Ga0066368_101057792	3300006002	Marine	EMTRMKISKQQKTMKAILKVKTQSFLDNYEKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0066375_100492412	3300006019	Marine	MEMKISKPYKTMKSILKIKTQSFLDNYKKDIFQNMLKKPEVEVVNDSDKQIKQWIKEGTFTNDLLVDAIKNVMKER
Ga0068504_11093341	3300006304	Marine	MKEMTKMEMRTSKPYKTMKSILKIKTQSFLDNYKKDIFQNVLKKPEVDVVNDSDKQVKQWIKEETFTDDLLVDAIKNVMKERIKNG*
Ga0068504_11093362	3300006304	Marine	MRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDIVNESDKQVKQWIKDKTLTEDLLVDAIKNVMKERIKNG*
Ga0068504_11093372	3300006304	Marine	MEMRTSKPYKTMKSILKVKTQSFLDNYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068469_12095862	3300006306	Marine	MEMRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068469_12352592	3300006306	Marine	MRTSKPYKTMKSIFKVKTQSFIDVYKKNLFQDILEKPELDVVNESDKQVKQWIKEETLTDDLL
Ga0068470_11499203	3300006308	Marine	MMRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTEDLLVDAIKNVMKERIKNG*
Ga0068479_11275842	3300006309	Marine	MRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068471_13158703	3300006310	Marine	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDGTLTDNLLVDAIKNVMKERIKNG*
Ga0068471_16261686	3300006310	Marine	MKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068471_16264971	3300006310	Marine	MRTSKPHKTMKSILKVKTQSFIDSYKKNLFQGILEKPELDVVNESDKQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG*
Ga0068471_16279753	3300006310	Marine	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068471_16294945	3300006310	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068478_12816132	3300006311	Marine	MRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKNG*
Ga0068472_104826042	3300006313	Marine	MEMRTSKPYKTMKSILKVKTQSFIDFYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERINNG*
Ga0068472_105506242	3300006313	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG*
Ga0068472_106710982	3300006313	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTEDLLVDAIKNVMKERIKNG*
Ga0068472_110585811	3300006313	Marine	KVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKHG*
Ga0068501_11548841	3300006325	Marine	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVDA
Ga0068477_11820353	3300006326	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERINNG*
Ga0068477_14645723	3300006326	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068502_11276943	3300006336	Marine	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068502_11698912	3300006336	Marine	MKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLIDAIKNVMKERIKNG*
Ga0068502_16887023	3300006336	Marine	MEMRTSKPYKTMKSILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKNG*
Ga0068482_11868912	3300006338	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068482_11868922	3300006338	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068482_12166092	3300006338	Marine	MKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068482_13080052	3300006338	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTEDLLVDAIKNVMKERIKNG*
Ga0068482_14943932	3300006338	Marine	MRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNGYNK
Ga0068481_11315794	3300006339	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDIVNESDKQVKQWIKDKTLTEDLLVDAIKNVMKERIKNG*
Ga0068481_15116143	3300006339	Marine	MEMRTSKPYKTMKSILKVKTQSFIDAYKKNLFQGILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068481_15180082	3300006339	Marine	MRTSKPYKTMKSILQVKTQSFIDTYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068481_15233062	3300006339	Marine	MRMKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKNG*
Ga0068503_104587852	3300006340	Marine	MKISKQQKTMKTILKIKTQSFLDNYKKNLFQDILKKPEIDVVNKSDKQVKQWIKEGTLTDDLLVGAIKNVMKESDLY
Ga0068503_104778172	3300006340	Marine	MRTSKPYKTMKSILKVKTQSFIDYYKKNLFQDILEKPELDVVNKSDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068503_104778181	3300006340	Marine	MKISKQQKTMKAILKVKTQSFLDSYKKNLFQDILKKSELDIVNESDKQVKQWIKDKTLTEDLLV
Ga0068503_105205863	3300006340	Marine	MRMKISKQQKTMKTILKIKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068503_105223331	3300006340	Marine	LKIKTQSFLDNYKKNLFQDILKKPEIDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKNG*
Ga0068503_105456843	3300006340	Marine	MRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTFTDDLLVDAIKNVMKERIKNG*
Ga0068503_105465502	3300006340	Marine	MEMRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG*
Ga0068493_102595652	3300006341	Marine	MTKMKTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0068493_102629042	3300006341	Marine	MKISKQQKTMKTILKIKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG*
Ga0066372_100673592	3300006902	Marine	MKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPEFDVVNENDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG*
Ga0066372_101348192	3300006902	Marine	MRTSKPYKTMKSILKVKTQSFIDSYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNAIKNVMKERVKNG*
Ga0066372_101939413	3300006902	Marine	MRTSKPHKTMKSILKVKTQSFIDAYKKNLFQGILEKPELDVVNESDKQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG*
Ga0066372_104462772	3300006902	Marine	MKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG*
Ga0105019_10279923	3300007513	Marine	MRTSKPYKTMKSILKVKTQSFIENYKKNLFQDILEKPELDIVNESDKQVKEWIKDGTLTDNLLVNAIKNVMKERIKNG*
Ga0105020_12914603	3300007514	Marine	MKSILKVKTQSFIENYKKNLFQDILEKPELDIVNESDKQVKEWIKDGTLTDNLLVNAIKNVMKERIKNG*
Ga0114996_106921052	3300009173	Marine	MKTSKPHKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDTQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG*
Ga0114993_100663772	3300009409	Marine	MKTSKPYKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDTQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG*
Ga0105173_10167993	3300009622	Marine Oceanic	TKMEMRISKPYKTMKSILKIKTQSFLDNYKKNLFQDMLKKTELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG*
Ga0181432_10665781	3300017775	Seawater	QKKMKWEMTKMEMRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG
Ga0181432_11192561	3300017775	Seawater	IRRMMMRTSKPYKTMKSILKVKTQSFIDVYKKNLFQNILEKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG
Ga0211656_101839793	3300020375	Marine	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG
Ga0211646_100904403	3300020383	Marine	MKISKQQKTMKSILKIKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG
Ga0211646_100953872	3300020383	Marine	MRTSKPYKTMKSILKVKTQSFIDSYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNAIKNVMKERVKNG
Ga0211646_101285774	3300020383	Marine	KTMKSILKVKTQSFIDTYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG
Ga0211623_101871033	3300020399	Marine	MRTSKPYKTMKSILKVKTQSFIDSYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLINAIKNVMKERIKNG
Ga0211553_100734042	3300020415	Marine	MKTSKPYKTMKSILKVKTQSFIDTYKKNLFQDILEKPELEVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG
Ga0211536_104040402	3300020426	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERINNG
Ga0206684_10564533	3300021068	Seawater	MKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDGTLTDNLLVDAIKNVMKERIKNG
Ga0206695_15181292	3300021348	Seawater	MRTSKPHKTMKSILKVKTQSFIDAYKKNLFQGILEKPELDVVNESDKQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG
Ga0206680_101639003	3300021352	Seawater	MRTSKPHKTMKSILKVKTQSFIDSYKKNLFQGILEKPELDVVNESDKQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG
Ga0206681_102174882	3300021443	Seawater	MRMKISKQQKTMKTILKIKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG
Ga0206681_102935112	3300021443	Seawater	MRTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNG
Ga0206681_103627971	3300021443	Seawater	MRTSKPYKTMKSILKVKTQSFIDSYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKNG
Ga0226832_101339062	3300021791	Hydrothermal Vent Fluids	MEMRNSKPYKTMKSILKVKTQSFLDSYKKNLFQDIVEKPELDVVNESDKQVKQWIKDGTLTDNLLVNAIKTVMKERIKNG
Ga0232646_10160193	3300021978	Hydrothermal Vent Fluids	MEMRTSKPYKTMKSILKIKTQSFLDNYKKDIFQNMLKKPEVDVVNDSDKQIKQWIKEETLTDDLLVDAIKNVMKERIKNG
Ga0209041_10919952	3300025623	Marine	MRTSKPHKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNVIKNVMKERIKNG
Ga0209657_10040445	3300025676	Marine	MRTSKPHTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNVIKNVMKERIKNG
Ga0209667_10465451	3300025707	Marine	IRRMMMMRTSKPHKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNVIKNVMKERIKNG
Ga0208750_10929421	3300026082	Marine	MKISKQQKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG
Ga0209753_11533902	3300027622	Marine	NQKKMTREMTRMKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKHG
Ga0209432_11176482	3300027630	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG
Ga0209019_10209302	3300027677	Marine	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDMLEKPELDVVNESDKQVEQWIKDKTLTDDLLVNAIKNVMKERVKNG
Ga0209019_10994642	3300027677	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKERIKHG
Ga0209752_10212282	3300027699	Marine	MKISKQQKTMKSILKVKTQSFIDNYKKNLFQDMLEKPELDVVNESDKQVKQWIKDKTLTDDLLVNAIKNVMKERVKNG
Ga0209752_10214592	3300027699	Marine	MKISKQQKTMKSILKIKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKGRIKHG
Ga0209228_10334691	3300027709	Marine	LTTSLLQEAWDTRLEMTKMEMRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDVVNESDEQVKKWIKDKTLTDDLLVNAIKNVMKERIKNG
Ga0209089_105008702	3300027838	Marine	MKTSKPYKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDTQVKQWIKDKSLTDDLLVDAIKNVMKERIKNGXYNK
Ga0257108_12289151	3300028190	Marine	MRTSKPYKTMKSILKVKTQSFIDNYKKDMFQDTLEKPKVDVVNDSDKQVKQWIKEETFTDDLLVDAIKNVMKERIKNG
Ga0257107_10110696	3300028192	Marine	MKTSKPYKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDKQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG
Ga0257121_12012033	3300028198	Marine	MMRTSKPHKTMKSILKVKTQSFIDNYKKNLFQDILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNVIKNVMKERIKNGXYNK
Ga0257109_11302882	3300028487	Marine	MKISKQQKTMKAILKVKTQSFLDNYKKNLFQDILKKPKLDVVNESDKQVKQWIKDKTLTEDLLVDAIKNVMKERIKNG
Ga0257112_101691653	3300028489	Marine	ISKQQKTMKDILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG
Ga0257112_102314042	3300028489	Marine	MRTSKPYKTMKSILKVKTQSFIDSYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVD
Ga0302118_100592203	3300031627	Marine	MKTSKPYKTMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDTQVKQWIKDKSLTDDLLVDAIKNVMKERIKNG
Ga0310124_102414343	3300031804	Marine	MKMEMTTSKPYKTMKSILKIKTDSFLDTYKKDIFQNMLKKTEVDVVNDSDKQVKQWIKEGALTNDLLVDAIKNIMKERIKNG
Ga0315319_105149463	3300031861	Seawater	MEMRTSKPYKTMKSILKVKTQSFIDNYKKNLFQDMLEKPELDVVNESDKQVKQWIKDKTLTDDLLVNAIKNVMKERVKNG
Ga0315318_105346841	3300031886	Seawater	MKTSKPYKTMKSILKVKTQSFIDVYKKNLFQDILKKPELDVVNESDKQVKQWIKEETLTDDLL
Ga0315316_107246621	3300032011	Seawater	MRTSKAQTTMKSILKVKTQSFIDNYKKNLFQDILKKPELDVVNESDEQVKKWIKDKTLTDDLLVNAIKNVMKERIKNG
Ga0315327_104820242	3300032032	Seawater	MRTSKPHKTMKSILKVKTQSFIDSYKKNLFQGILEKPELDVVNESDKQVKQWIKDKSLTDDLLVDAIKNVMKERIKNGXYNK
Ga0315329_101706052	3300032048	Seawater	MKTSKPYKNMKSILKVKTQSFIDVYKKNLFKDILEKPELDVVNESDKQVKQWIKDKSLTDDLLVGAIKNVMKERIKNG
Ga0315329_102898203	3300032048	Seawater	MRMKISKQQKTMKTILKIKTQSFLDNYKKNLFQDILKKPEIDVVNESDKQVKQWIKEGTLTDDLLVGAIKNVMKERIKHG
Ga0310345_112219161	3300032278	Seawater	MRTSKPYKTMKSILKVKTQSFIDAYKKNLFQDILKKPELDIVNESDKQVKQWIKEETLTDDLLVDAIKNVMKERIKNGXYNK
Ga0310345_114526412	3300032278	Seawater	MKISKQQKTMKTILKVKTQSFLDNYKKNLFQDILKKPELDVVNESDKQVKQWIKDKTLTDDLLVDAIKNVMKER
Ga0310345_116685683	3300032278	Seawater	MRTSKPHKTMKSILKVKTQSFIDAYKKNLFQGILEKPELDVVNESDKQVKQWIKDKTLTDDLLVNAIKNVMKERIKNG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099448

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences