NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099437

Metagenome / Metatranscriptome Family F099437

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099437
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 42 residues
Representative Sequence KEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKRI
Number of Associated Samples 73
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 93.20 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.524 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(73.786 % of family members)
Environment Ontology (ENVO) Unclassified
(95.146 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.204 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.50%    β-sheet: 20.83%    Coil/Unstructured: 66.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00856SET 6.80
PF01327Pep_deformylase 1.94
PF13432TPR_16 0.97
PF00961LAGLIDADG_1 0.97
PF04820Trp_halogenase 0.97
PF137592OG-FeII_Oxy_5 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 1.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.52 %
All OrganismsrootAll Organisms17.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001735|JGI24520J20079_1005225All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300002242|KVWGV2_10862577Not Available683Open in IMG/M
3300002488|JGI25128J35275_1124134Not Available513Open in IMG/M
3300002514|JGI25133J35611_10130380Not Available708Open in IMG/M
3300002518|JGI25134J35505_10108499Not Available598Open in IMG/M
3300002760|JGI25136J39404_1040510Not Available859Open in IMG/M
3300002760|JGI25136J39404_1054934All Organisms → cellular organisms → Bacteria → Proteobacteria738Open in IMG/M
3300005514|Ga0066866_10228817Not Available647Open in IMG/M
3300005604|Ga0066852_10333899All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300006308|Ga0068470_1586954Not Available504Open in IMG/M
3300006736|Ga0098033_1088431All Organisms → Viruses885Open in IMG/M
3300006738|Ga0098035_1177550Not Available716Open in IMG/M
3300006738|Ga0098035_1187200Not Available694Open in IMG/M
3300006751|Ga0098040_1190599Not Available601Open in IMG/M
3300006753|Ga0098039_1113282All Organisms → Viruses932Open in IMG/M
3300006753|Ga0098039_1249198Not Available597Open in IMG/M
3300006753|Ga0098039_1288248Not Available549Open in IMG/M
3300006754|Ga0098044_1099021Not Available1196Open in IMG/M
3300006754|Ga0098044_1239202Not Available705Open in IMG/M
3300006754|Ga0098044_1417695Not Available503Open in IMG/M
3300006789|Ga0098054_1053114Not Available1549Open in IMG/M
3300006789|Ga0098054_1070490Not Available1323Open in IMG/M
3300006793|Ga0098055_1363842Not Available537Open in IMG/M
3300006793|Ga0098055_1405089Not Available505Open in IMG/M
3300006923|Ga0098053_1092690Not Available610Open in IMG/M
3300006924|Ga0098051_1178016Not Available558Open in IMG/M
3300006927|Ga0098034_1210161Not Available542Open in IMG/M
3300006928|Ga0098041_1194430Not Available650Open in IMG/M
3300008050|Ga0098052_1031055All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon2428Open in IMG/M
3300008050|Ga0098052_1227816Not Available717Open in IMG/M
3300008050|Ga0098052_1232344Not Available709Open in IMG/M
3300008050|Ga0098052_1281194Not Available631Open in IMG/M
3300008050|Ga0098052_1324148Not Available580Open in IMG/M
3300008216|Ga0114898_1194760Not Available565Open in IMG/M
3300008217|Ga0114899_1030206All Organisms → Viruses → environmental samples → uncultured virus2028Open in IMG/M
3300009414|Ga0114909_1007779All Organisms → Viruses → Predicted Viral4048Open in IMG/M
3300009414|Ga0114909_1079650Not Available922Open in IMG/M
3300009428|Ga0114915_1130637Not Available725Open in IMG/M
3300009602|Ga0114900_1120928Not Available700Open in IMG/M
3300009603|Ga0114911_1152997Not Available646Open in IMG/M
3300010149|Ga0098049_1122375Not Available809Open in IMG/M
3300010149|Ga0098049_1169623Not Available672Open in IMG/M
3300010149|Ga0098049_1174708Not Available661Open in IMG/M
3300010150|Ga0098056_1180100Not Available709Open in IMG/M
3300010150|Ga0098056_1328888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275502Open in IMG/M
3300010151|Ga0098061_1094961Not Available1114Open in IMG/M
3300010151|Ga0098061_1269453Not Available590Open in IMG/M
3300010151|Ga0098061_1303168Not Available549Open in IMG/M
3300010153|Ga0098059_1276828Not Available644Open in IMG/M
3300010153|Ga0098059_1354373Not Available557Open in IMG/M
3300010155|Ga0098047_10068421Not Available1393Open in IMG/M
3300010155|Ga0098047_10116932Not Available1038Open in IMG/M
3300010155|Ga0098047_10257025Not Available663Open in IMG/M
3300010155|Ga0098047_10273328Not Available640Open in IMG/M
3300017704|Ga0181371_1064069Not Available596Open in IMG/M
3300017705|Ga0181372_1015518Not Available1321Open in IMG/M
3300017714|Ga0181412_1097242Not Available695Open in IMG/M
3300017772|Ga0181430_1104942Not Available839Open in IMG/M
3300018968|Ga0192894_10243511Not Available601Open in IMG/M
3300020361|Ga0211531_1126179Not Available683Open in IMG/M
3300021791|Ga0226832_10383096All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium589Open in IMG/M
(restricted) 3300024520|Ga0255047_10270232Not Available862Open in IMG/M
3300025045|Ga0207901_1006086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium1756Open in IMG/M
3300025045|Ga0207901_1020717Not Available900Open in IMG/M
3300025046|Ga0207902_1020769All Organisms → Viruses771Open in IMG/M
3300025049|Ga0207898_1020473Not Available838Open in IMG/M
3300025052|Ga0207906_1028756Not Available766Open in IMG/M
3300025066|Ga0208012_1062974Not Available526Open in IMG/M
3300025084|Ga0208298_1010988Not Available2217Open in IMG/M
3300025085|Ga0208792_1086623Not Available554Open in IMG/M
3300025096|Ga0208011_1081088Not Available709Open in IMG/M
3300025096|Ga0208011_1111119Not Available573Open in IMG/M
3300025099|Ga0208669_1012518All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2325Open in IMG/M
3300025103|Ga0208013_1018286All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C1752110Open in IMG/M
3300025108|Ga0208793_1181258Not Available538Open in IMG/M
3300025110|Ga0208158_1113741Not Available631Open in IMG/M
3300025118|Ga0208790_1085467Not Available936Open in IMG/M
3300025118|Ga0208790_1182690Not Available562Open in IMG/M
3300025128|Ga0208919_1250692Not Available514Open in IMG/M
3300025131|Ga0209128_1078129Not Available1118Open in IMG/M
3300025131|Ga0209128_1128728Not Available782Open in IMG/M
3300025131|Ga0209128_1142217All Organisms → Viruses726Open in IMG/M
3300025131|Ga0209128_1157288Not Available675Open in IMG/M
3300025133|Ga0208299_1104725All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.950Open in IMG/M
3300025138|Ga0209634_1261136Not Available620Open in IMG/M
3300025141|Ga0209756_1315585Not Available545Open in IMG/M
3300025151|Ga0209645_1147266Not Available728Open in IMG/M
3300025267|Ga0208179_1084774Not Available647Open in IMG/M
3300025268|Ga0207894_1081507Not Available549Open in IMG/M
3300025277|Ga0208180_1113272Not Available587Open in IMG/M
3300025296|Ga0208316_1034892Not Available1142Open in IMG/M
3300025301|Ga0208450_1007176Not Available3916Open in IMG/M
3300025305|Ga0208684_1075972Not Available873Open in IMG/M
3300025873|Ga0209757_10231187Not Available587Open in IMG/M
3300025873|Ga0209757_10285406Not Available525Open in IMG/M
3300027906|Ga0209404_10744116Not Available663Open in IMG/M
3300027906|Ga0209404_11157670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275532Open in IMG/M
3300028192|Ga0257107_1227151Not Available525Open in IMG/M
3300028535|Ga0257111_1113546Not Available848Open in IMG/M
3300031811|Ga0310125_10147347Not Available1224Open in IMG/M
3300032820|Ga0310342_102776771All Organisms → Viruses585Open in IMG/M
3300033742|Ga0314858_188345Not Available530Open in IMG/M
3300034695|Ga0372840_165265Not Available660Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine73.79%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean12.62%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.91%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.94%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.94%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.94%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.97%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.97%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.97%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.97%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300005604Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63EnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300018968Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_068 - TARA_N000000713 (ERX1782205-ERR1712096)EnvironmentalOpen in IMG/M
3300020361Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025296Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300028535Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500mEnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034695Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500mEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24520J20079_100522543300001735MarineSFKKLLKSLVIPNPKWTGFMSYENKKGRYVVHSILNGKRI*
KVWGV2_1086257713300002242Marine SedimentQKEAMSCKRLLKSLITPNPKWTGLLNYTNKKGRSVTHRILNGKRI*
JGI25128J35275_112413433300002488MarineEEKEAMSFKKILKSLVEPNPKWTGFLNYTNKKGRHVTHSILNGKKI*
JGI25133J35611_1013038013300002514MarineEEKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKRI*
JGI25134J35505_1010849913300002518MarineKEAMSYKKLLKSLVTLNPKWTGWITYKNKKDKYVKHNILKGKRICEVL*
JGI25136J39404_104051013300002760MarineIEDKEAMSYKKLLKSLVASNPKWAGWIAYKNKKDKYVKHSILNGKRK*
JGI25136J39404_105493413300002760MarineEAMSFKKLLKSLVIPNPKWTGFMSYENKKGRYVVHSILNGKRI*
Ga0066866_1022881733300005514MarineDKEAMSFKKLLKSLITPNPKWTGFMSYENKKGRYIVHSILNGKRI*
Ga0066852_1033389913300005604MarineGETTEKEGMSFKKMLKSLVNPNPKFEGAISYTNKKGRYVCHSISKGKRI*
Ga0068470_158695413300006308MarineESMSFKKLLKSLVTRNPKWTGFISYENKKGRFVTHSILNGKKI*
Ga0098033_108843143300006736MarineLKSLVNPNPKWTGFMSYENKKGRWITHSILNGKRI*
Ga0098035_117755013300006738MarineKLLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRI*
Ga0098035_118720033300006738MarineLKSLVNPNPKWAGWIAYKNKKGKYVKHGILNGKKK*
Ga0098040_119059913300006751MarineKESMSFKKLLKSLITPNPKWTGLLNYNNKKGRSVTHSIKDGKKI*
Ga0098039_111328233300006753MarineEKESMFFKKLLKSLVTPNPKWTGLLNYNNKKGRTVTHIIKNGKRI*
Ga0098039_124919833300006753MarineLKSLVTPNPKWAGWIAYKNKKGKYVRHSILNGKRI*
Ga0098039_128824823300006753MarineKKLLKSLVTPNPKWTGMIVYKNKKGRDTGHAILRGKKHGVCEKI*
Ga0098044_109902113300006754MarineAMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKKI*
Ga0098044_123920213300006754MarineVLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKKI*
Ga0098044_141769533300006754MarineFKKLLKSLITPNPKWAGWIAYKNKKGKYVRHSILNGKRI*
Ga0098054_105311413300006789MarineKESMSFKKLLKSLVTLNPKWTGLLNYTNKKGRSVTHRILKGKRI*
Ga0098054_107049013300006789MarineKILKSLVSTNPKWTGFLHYTNKKGRPVTHDILNGKKI*
Ga0098055_136384233300006793MarineEEIEKEAMSFKKVLKSLVTPNPKWAGWIAYKNKKGKYVKHSILNGKRI*
Ga0098055_140508913300006793MarineMSFKKILKSLVEPNPKWTGFLNYTNKKGRYVTHSILNGKKI*
Ga0098053_109269013300006923MarineEDKEAMSFKKLLKSLTTPNPKWTGWIAYKNKKDTYIKHSILNGKRV*
Ga0098051_117801613300006924MarineMSFKKLLKSLVIPNPKWTGFMSYENKKGRYVVHSILNGKRI*
Ga0098034_121016113300006927MarineKEEMSFKKLLKSLVTSNPKWTGFMSYENKKGRYVVHSILNGKKI*
Ga0098041_119443013300006928MarineQEEMSFKKVLKSLVTSNPKWTGFMSYENKKGRYVVHSILNGKKI*
Ga0098052_103105513300008050MarineEEEKEAMSFKKILKSLVEPNPNWTGSLEYTNKKGRQVAHLIVKGKRHGEYR*
Ga0098052_122781643300008050MarineEVEKEGMSFKKILKSLVEPNPKWTGFLNYTNKKGRFVTHSILNGKKI*
Ga0098052_123234433300008050MarineEIEKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGRKI*
Ga0098052_128119413300008050MarineEAMSYKKLLKSLVTPNPKWTGWIAYKNKKDKYVKHSILNGKRI*
Ga0098052_132414833300008050MarineLKSLVNPNPKWAGWIAYKNKKGKYVKHSILNGKRV*
Ga0114898_119476033300008216Deep OceanLKSLITPNPKWTGWISYKNKKDKYVKHSILNGKRI*
Ga0114899_103020613300008217Deep OceanLKSLVNPNPKWAGWIAYKNKKGKYVKHSILNGKRK*
Ga0114909_100777913300009414Deep OceanKEAMSFKKLLKSLVIPNPKWTGFMSYENKKGRYVVHSILNGKRI*
Ga0114909_107965043300009414Deep OceanLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRI*
Ga0114915_113063733300009428Deep OceanEEKESMSYKKLLKSLVTPNPKWTGFISYENKKGRFVTHSILNGKKI*
Ga0114900_112092813300009602Deep OceanSYKKLLKSLVASNPKWAGWIAYKNKKDNYVKHSILNGKRV*
Ga0114911_115299743300009603Deep OceanEKEAMSFKKLLKSLVIPNSKWTGWIVYKNKKNKYVKHNILNGKQI*
Ga0098049_112237513300010149MarinePEEEKESMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKKI*
Ga0098049_116962333300010149MarineLKSLVSTNPKWTGFLHYTNKKGRPVTHDILNGKKI*
Ga0098049_117470833300010149MarineSFKKTLKSLVSTNPKWTGFLHYTNKKGRPVTHDILNGKKI*
Ga0098056_118010013300010150MarineKEAMSFKKLLKSLVTPNPKWTGLLNYTNKKGRSVTHRILGGKRI*
Ga0098056_132888813300010150MarineESMSFKKVLKSLVSTNPKWTGFMSYENKKGRWVTHSILNGKKI*
Ga0098061_109496113300010151MarinePEEEKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKRV*
Ga0098061_126945313300010151MarineEKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKRI*
Ga0098061_130316823300010151MarineDEEKEAMSYKKLLKSLVTLNPKWTGWITYKNKKDRYVKHNILKGKKVCEVL*
Ga0098059_127682813300010153MarineKEAMSFKKLLKSLITPHPKWTGWIAYQNKKDKYVKHSILNGKRI*
Ga0098059_135437313300010153MarineKEAMSYKKLLKSLVTPNPKWTGRIAYKNKKDRYVEHSILNGKRI*
Ga0098047_1006842173300010155MarineSFKKLLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRI*
Ga0098047_1011693213300010155MarineSMSFKKLLKSLVTLNPKWTGLLNYTNKKGRSVTHRILKGKRI*
Ga0098047_1025702513300010155MarineKEAMSFKKVLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKRI*
Ga0098047_1027332813300010155MarineIEDKEAMSFKKLLKSLVNPNPKWAGWIAYKNKKGKYVKHSILNGKRV*
Ga0181371_106406913300017704MarineNILKSLVNTNPKLTGFMSYENKKGRYVVHSILNGKKI
Ga0181372_101551813300017705MarineIESMSFKKLLKSLVTLNPKWTGLLNYTNKKGRSVTHRILKGKRI
Ga0181412_109724213300017714SeawaterLLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKRI
Ga0181430_110494213300017772SeawaterLLKSLVTPNPKWTGFISYENKKGRSVTHSILNGKKI
Ga0192894_1024351133300018968MarineHGEKESMSYKKLLKSLVTTAPKWTGFMCYENKKGRWVTHSILNGKKI
Ga0211531_112617933300020361MarineEDEEKEAMSYKKLLKSLVTLNPKWTGWIAYKNKKDRYVKHIILKGKKV
Ga0226832_1038309613300021791Hydrothermal Vent FluidsKESMSYKKLLKSLVTPNPKWTGFISYENKKGRFVTHSILNGKKI
(restricted) Ga0255047_1027023243300024520SeawaterEKEGMSFKKILKSLVNINPKWTGFLNYTNKKGRYVTHSILNGKKI
Ga0207901_100608613300025045MarineLKSLVTPNPKWTGFISYTNKKGRWVTHSILQGKRI
Ga0207901_102071743300025045MarineFKKLLKSLVEPNPKWTGFMSYENKKGRYVVHSIKDGKRI
Ga0207902_102076913300025046MarineSFKKLLKSLVIPNPKWTGFMSYENKKGRYVVHSILNGKRI
Ga0207898_102047313300025049MarineYKKLLKSLVTSNPKWTGWIAYKNKKNKYVKHNILNGRRT
Ga0207906_102875613300025052MarineLLKSLVAPDPKWTGFISYENKKGRFVTHSILNGKKI
Ga0208012_106297413300025066MarineSFKKILKSLVSTNPKWTGFLHYTNKKGRPVTHDILNGKKI
Ga0208298_101098813300025084MarineKPEEEWEMVDKESMSFKKLLKSLVTLNPKWTGLLNYTNKKGRSVTHRILKGKRI
Ga0208792_108662313300025085MarineMSFKKVLKSLVTPNPKWTGWIAYKNKKKRMVYHNILNGKRT
Ga0208011_108108813300025096MarineEEEKEGMSFKKILKSLVEPNPNWTGSLEYTNKKGRQVAHLIVKGKRHGEYR
Ga0208011_111111933300025096MarineEEKEAMSYKKLLKSLVTLNPKWTGWITYKNKKDRYVKHNILKGKKVCEVL
Ga0208669_101251883300025099MarinePEEEWEMVDKESMSFKKLLKSLVTLNPKWTGLLNYTNKKGRSVTHRILKGKRI
Ga0208013_101828693300025103MarineKKILKSLVNTNPKWTGFMSYENKKGRWVTHSILNGKRI
Ga0208793_118125833300025108MarineEKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKRI
Ga0208158_111374113300025110MarineKLLKSLVTSNPKWTGFMSYENKKGRYVVHSILNGKKI
Ga0208790_108546713300025118MarineKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKKI
Ga0208790_118269033300025118MarineKESMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKKI
Ga0208919_125069213300025128MarineKKEEKESMSFKKLLKSLVTPNPKWTGFISYENKKGRFVTHSILKGKRI
Ga0209128_107812913300025131MarineKEAMSFKKLLKSLVTPNPKWTGLLNYTNKKGRSVTHRILNGKRV
Ga0209128_112872813300025131MarineKILKSLVNTNPKWTGFLHYTNKKGRPVTHDILNGKKI
Ga0209128_114221713300025131MarineSFKKLLKSLVTSNPKWTGFMSYENKKGRYVVHSILNGKRI
Ga0209128_115728833300025131MarineVLKSLVTSNPKWTGFMSYENKKGRYVVHSILNGKKI
Ga0208299_110472533300025133MarineFKKLLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRI
Ga0209634_126113633300025138MarineLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKRI
Ga0209756_131558513300025141MarineKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRMVTHSILNGKRI
Ga0209645_114726643300025151MarineAMSFKKILKSLVEPNPKWTGFLNYTNKKGRHVTHSILNGKKI
Ga0208179_108477433300025267Deep OceanLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRI
Ga0207894_108150713300025268Deep OceanMSFKKLLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRV
Ga0208180_111327233300025277Deep OceanKEAMSFKKLLKSLITPNPKWTGWIAYQNKKDKYVKHSILNGKRI
Ga0208316_103489243300025296Deep OceanSYKKLLKSLVTPNPKWTGWIAYKNKKDKYVKHSILNGKRI
Ga0208450_1007176143300025301Deep OceanFKKLLKSLVNPNPKWAGWIAYKNKKGKYVKHSILNGKRV
Ga0208684_107597243300025305Deep OceanFKKLLKSLVTPNPKWTGFMSYENKKGKYVVHSILNGKRV
Ga0209757_1023118733300025873MarineSKKLLKSLITPNPKWAGWIAYKNKKGKYIKHSILNGKRV
Ga0209757_1028540613300025873MarineKKEEKEAMSFKKLLKSLVTPNPKWTGFISYENKKGRFVTHSILNGKKI
Ga0209404_1074411613300027906MarineVEKEAMSFKKLLKSLVTPNPKWTGFMSYENKKGRYVVHSILNGKKI
Ga0209404_1115767013300027906MarineKKILKALITPNPKWTGYISYKNKKKRMVYHNILNGKRT
Ga0257107_122715113300028192MarineYKKLLKSLVTSNPKWTGFISYENKKGRFVTHSILNGKRI
Ga0257111_111354613300028535MarineEEKESMSFKKLLKSLVTPNPKWTGFISYENKKGRFVTHSILNGKKI
Ga0310125_1014734713300031811MarineEKESMSYKKLLKSLVTPNPKWTGFISYENKKGRFVTHSILNGKKI
Ga0310342_10277677133300032820SeawaterESMSFKKLLKSLVTPNPKWTGLLNYTNKKGRSVTHNILKGKRI
Ga0314858_188345_390_5303300033742Sea-Ice BrineEEKEEGGRRKLLKSLVTPNPKWTGFISYENKKGRFVTHSILNGKKI
Ga0372840_165265_2_1363300034695SeawaterVTEDGKKEEKESMSFKKLLKSLVTPNSKWTGFISYENKKGRFVTH


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