Metagenome / Metatranscriptome Family F099366

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099366
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	85 residues
Representative Sequence	MPFDAATAAMYKAMCAKKNRDGLTGLGDVACWYNDKHGELQVLKGLTMFSIEMRKSGDPTEAIKAVARKVYERVK
Number of Associated Samples	88
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.12 %
% of genes near scaffold ends (potentially truncated)	87.38 %
% of genes from short scaffolds (< 2000 bps)	92.23 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.204 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (9.709 % of family members)
Environment Ontology (ENVO)	Unclassified (37.864 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.835 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.18% β-sheet: 23.30% Coil/Unstructured: 49.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00248	Aldo_ket_red	10.68
PF06445	GyrI-like	3.88
PF04405	ScdA_N	2.91
PF13646	HEAT_2	2.91
PF13360	PQQ_2	2.91
PF00069	Pkinase	1.94
PF07638	Sigma70_ECF	1.94
PF03995	Inhibitor_I36	1.94
PF07969	Amidohydro_3	1.94
PF02634	FdhD-NarQ	1.94
PF05050	Methyltransf_21	1.94
PF09163	Form-deh_trans	0.97
PF06776	IalB	0.97
PF07519	Tannase	0.97
PF00326	Peptidase_S9	0.97
PF01545	Cation_efflux	0.97
PF01625	PMSR	0.97
PF00487	FA_desaturase	0.97
PF02687	FtsX	0.97
PF02746	MR_MLE_N	0.97
PF12276	DUF3617	0.97
PF12704	MacB_PCD	0.97
PF07676	PD40	0.97
PF00406	ADK	0.97
PF01551	Peptidase_M23	0.97
PF12543	DUF3738	0.97
PF05988	DUF899	0.97
PF11154	DUF2934	0.97
PF00030	Crystall	0.97
PF13561	adh_short_C2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.77
COG2846	Iron-sulfur cluster repair protein YtfE, RIC family, contains ScdAN and hemerythrin domains	Posttranslational modification, protein turnover, chaperones [O]	2.91
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	1.94
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.94
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.94
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.97
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.97
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.97
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.97
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.97
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.97
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.97
COG5342	Invasion protein IalB, involved in pathogenesis	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.20 %
Unclassified	root	N/A	6.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.20 %
Unclassified	root	N/A	6.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.20 %
Unclassified	root	N/A	6.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.82 %
Unclassified	root	N/A	6.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	69.90 %
Unclassified	root	N/A	6.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.90 %
Unclassified	root	N/A	6.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Fimbriimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.90 %
Unclassified	root	N/A	6.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.94 %
Fimbriimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales	0.97 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.90 %
Unclassified	root	N/A	6.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.94 %
Fimbriimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae	0.97 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.97 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.90 %
Unclassified	root	N/A	6.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.94 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.97 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.97 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.90 %
Unclassified	root	N/A	6.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.94 %
Mesorhizobium loti R88b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti → Mesorhizobium loti R88b	0.97 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.97 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0637551	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0810058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300000550\|F24TB_11926506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300000550\|F24TB_11940855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300000891\|JGI10214J12806_10765931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300002121\|C687J26615_10030277	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300004156\|Ga0062589_100258689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1311	Open in IMG/M
3300004157\|Ga0062590_100095755	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300004157\|Ga0062590_101179169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300004480\|Ga0062592_101996379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300005093\|Ga0062594_101477037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300005187\|Ga0066675_10667329	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005295\|Ga0065707_10457161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300005295\|Ga0065707_11105594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005332\|Ga0066388_104772728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005336\|Ga0070680_101112085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300005338\|Ga0068868_101054224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300005340\|Ga0070689_100194726	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300005406\|Ga0070703_10159766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300005434\|Ga0070709_11424288	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005557\|Ga0066704_10530162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300005564\|Ga0070664_101692541	Not Available	599	Open in IMG/M
3300005569\|Ga0066705_10259893	Not Available	1101	Open in IMG/M
3300005618\|Ga0068864_101271942	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005718\|Ga0068866_10624951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	730	Open in IMG/M
3300005719\|Ga0068861_100284692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300005764\|Ga0066903_102657141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300005764\|Ga0066903_106331721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005840\|Ga0068870_11410916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005841\|Ga0068863_102743306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005843\|Ga0068860_102121681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300006358\|Ga0068871_101934616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300006797\|Ga0066659_11007682	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300006844\|Ga0075428_101825104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300006852\|Ga0075433_11754559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300006904\|Ga0075424_101748414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300006904\|Ga0075424_102295747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006914\|Ga0075436_100578290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300009100\|Ga0075418_10611400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300009137\|Ga0066709_100032062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5594	Open in IMG/M
3300009156\|Ga0111538_11474388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300009553\|Ga0105249_10386905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1426	Open in IMG/M
3300009609\|Ga0105347_1512008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300009678\|Ga0105252_10104314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300010047\|Ga0126382_11004236	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300010359\|Ga0126376_13229315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010362\|Ga0126377_10843136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300010373\|Ga0134128_11425971	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300010398\|Ga0126383_13201228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010399\|Ga0134127_11802577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300010399\|Ga0134127_12984843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300010403\|Ga0134123_10708088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300011405\|Ga0137340_1057109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300011428\|Ga0137456_1130137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012163\|Ga0137355_1066384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	690	Open in IMG/M
3300012166\|Ga0137350_1121484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012208\|Ga0137376_10698021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300012892\|Ga0157294_10097316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300012904\|Ga0157282_10098344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300012948\|Ga0126375_11552711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300012957\|Ga0164303_10462108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300012971\|Ga0126369_10157378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2144	Open in IMG/M
3300012971\|Ga0126369_13244507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300013297\|Ga0157378_11922709	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300013306\|Ga0163162_10311500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1706	Open in IMG/M
3300013308\|Ga0157375_12807383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300013308\|Ga0157375_12885591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300013308\|Ga0157375_13599985	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300014875\|Ga0180083_1075545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300015077\|Ga0173483_10570242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300015372\|Ga0132256_100450831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300015373\|Ga0132257_100751162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300017927\|Ga0187824_10268512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300018083\|Ga0184628_10253089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300018083\|Ga0184628_10592803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti → Mesorhizobium loti R88b	562	Open in IMG/M
3300023057\|Ga0247797_1041664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300024055\|Ga0247794_10222032	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300025899\|Ga0207642_10425511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300025917\|Ga0207660_10848414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300025930\|Ga0207701_10582938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300026089\|Ga0207648_10826974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300026095\|Ga0207676_12274466	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300028380\|Ga0268265_10507032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300028802\|Ga0307503_10528773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300028824\|Ga0307310_10711260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300028889\|Ga0247827_10703848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300031562\|Ga0310886_10093251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300031940\|Ga0310901_10434771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	577	Open in IMG/M
3300031943\|Ga0310885_10037475	All Organisms → cellular organisms → Bacteria → Acidobacteria	1938	Open in IMG/M
3300032000\|Ga0310903_10013975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2564	Open in IMG/M
3300032012\|Ga0310902_10564016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	751	Open in IMG/M
3300032013\|Ga0310906_10066904	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300032179\|Ga0310889_10060222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300032770\|Ga0335085_10854006	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300034354\|Ga0364943_0078561	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300034354\|Ga0364943_0094402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300034659\|Ga0314780_190963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300034664\|Ga0314786_116920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.90%
Host-Associated	Host-Associated	30.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.19%
Plants	Host-Associated → Plants	30.10%
Aquatic	Environmental → Aquatic	9.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.59%
Sediment	Environmental → Aquatic → Sediment	8.74%
Floodplain	Environmental → Terrestrial → Floodplain	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.62%
Loam	Environmental → Terrestrial → Soil → Loam	11.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012163	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_06375512	2228664021	Soil	TAAVYKAMCLKKTREGLTGLGDVACWYNDKHGELXVLKGLTMFSIEMRKSGDPTESIKGVARKVYDRVK
ICChiseqgaiiDRAFT_08100581	3300000033	Soil	EDAAATLGEAVKGPNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGLTMFSIXXXKSGDPTESIKGVARKVYDRVK*
F24TB_119265062	3300000550	Soil	KDPRATSMAEGPSSCEYTGSGLHVIQLNVIPLKAAEAGMYKLMCGKKSNEGLTGLGDVTCWYNEKHQEMQVLKGLTFFSIELRRSGDPTEAIKSAARKVYERLK*
F24TB_119408552	3300000550	Soil	GPRATAGPSMGGTSACEYSGPGIHKVNLNVMHLTPDMAAMYKALCAQKTKDGLTGLGDVACWYNEKHEELQVLKAGTFFSIELRKSGNPTEAIKGVAKKVYDRVK*
JGI10214J12806_107659312	3300000891	Soil	TKEDAAVALDEAVKGPNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK*
C687J26615_100302772	3300002121	Soil	DEAAVYRALCAXKGXEGLSGLGDVACWYSDEHEELQVLKGTTFFSIELQRSGNPTEAIKAVAKKVFDRLP*
Ga0062589_1002586892	3300004156	Soil	AVTGPKETFRPNGPSACEYTGSGIHKVQLTVYPLTAESAAVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK*
Ga0062590_1000957551	3300004157	Soil	AAMYKAMCAKKTNEGLTGLGDVACWYNNKHGELQVLKGLTMFSVELQKGGDPTEAIKGVARKVYERVK*
Ga0062590_1011791691	3300004157	Soil	NAANAGMYKAMCAKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK*
Ga0062592_1019963791	3300004480	Soil	MALNAANAGMYKAMCAKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK*
Ga0062594_1014770372	3300005093	Soil	GPRDTQSPNGPSACEYTGSGLHKVQLNVIPMTAQQAGMYKAMCAQKKHDGLTGLGETACWYNDKHAELQMLKGTMFLSIEMQRSGDPTEAIKAVAKKVYDRAK*
Ga0066675_106673292	3300005187	Soil	RTLCAQKGKEGLSALGDVACWYSDKHEELQVLKGLTFFSIELRRSGDPTEAIKGAAKRVFDQLR*
Ga0065707_104571611	3300005295	Switchgrass Rhizosphere	HVVHLNVIPLTAEGAEIYKAMCAQKGKEGLTGLGDATCWYNDKHGELQVLKGLTFFSIELRKSGDPTEAIKGVARKVYDRVK*
Ga0065707_111055942	3300005295	Switchgrass Rhizosphere	PDGASSCEYTGSGLHKVHLNVLPLTAATSAVYKAMCAQKGKDGLTGLGDVTCWYNDKHGELQVLKGLTFFSVELRKSGDPTEAIKTVARNVYGRLK*
Ga0066388_1021628062	3300005332	Tropical Forest Soil	MQLPADQAAIYKGLCAQKGHEGLTGLGETACWYNDKHEELQVLKGTTFFSIELRGKASPTEPIKAVAKRVFDQLR*
Ga0066388_1047727281	3300005332	Tropical Forest Soil	MAAAYKSLCDQKGKEGLSGLAPTACWYNDKHEELQVLKETTFFAIELRGSGNPTEPIKAAARKIFDQLK*
Ga0070680_1011120852	3300005336	Corn Rhizosphere	KGPNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK*
Ga0068868_1010542242	3300005338	Miscanthus Rhizosphere	PNGPSACEYTGSGIHKVQLTVYPLTAESAAVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK*
Ga0070689_1001947261	3300005340	Switchgrass Rhizosphere	AVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK*
Ga0070703_101597662	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ACEYEGSGLHRVHLNVMPFDAATAAMYKAMCAKKTNEGLTGLGDVACWYNNKHGELQVLKGLTMFSVELQKGGDPTEAIKAVARKVYERVK*
Ga0070709_114242881	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FDAATAAVYKGLCAKKGKEGLSGLGDTACWYSDKHEELQVLKGTTFFSIELRRSGDPTDAIKTLAKKIYDRVKP*
Ga0066704_105301621	3300005557	Soil	INLNLMRLSPGTAAVYRTLCAQKGKEGLSGLGDVACWYSDKHEELQVLKGLTFFSIELRKSGDPTEAIKGAAKRVFDQLR*
Ga0070664_1016925412	3300005564	Corn Rhizosphere	LTAAGAEIYKAMCAQKGKEGLTGLGDATCWYNDKHGELQVLKGLTFFSIELRKSGDPTEAIKGVARKVYNRVK*
Ga0066705_102598934	3300005569	Soil	PDMASMYKALCAQKSKDGLTGLGDVTCWYNDKHEELQVLKGGTFFSIELRKSGDPTEAIKGVAKKVFDQLK*
Ga0068864_1012719422	3300005618	Switchgrass Rhizosphere	ESAAVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK*
Ga0068866_106249511	3300005718	Miscanthus Rhizosphere	NVMPFTAETAAMYKTRSAQKGKDGLTGLGDAAIWYNDKHGELQVLKGLTFFSIQLRKSGDPTEAIKTVARKVYERMK*
Ga0068861_1002846921	3300005719	Switchgrass Rhizosphere	KVQLTVYPLTAESAAVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK*
Ga0066903_1026571411	3300005764	Tropical Forest Soil	EYAGSGINRINLSVIPLSGANASVYKAMCAQKKKEGLTGLGDTTCWYNDKHEELQVLKGTMFYSIELRRNGDPTEPIKAAAKKVYDRMK*
Ga0066903_1063317211	3300005764	Tropical Forest Soil	ASMYKAMCAQKNKDGLTGLGDTTCWYNDKHEELQVLKGTTFFSIEMRTSGDPTEPIKAVARKVYERVK*
Ga0068870_114109161	3300005840	Miscanthus Rhizosphere	AAVALGEAVKGPNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK*
Ga0068863_1021639291	3300005841	Switchgrass Rhizosphere	AQKGKDGLTGLGDVACWYNDKHGELQVLKGLTFFSIQLRKSGDPTEAIKTVARKVYERMK
Ga0068863_1027433061	3300005841	Switchgrass Rhizosphere	SLSLIPMTAATAGVYKGLCAQKNKDGLTGLGDTTCWYNDKHEELQVLKGLTFFTIEMRKSGDPTEAIKGVARKVYDRMK*
Ga0068860_1021216811	3300005843	Switchgrass Rhizosphere	YSGSGLHKVSLSLIPMTAATAGVYKGLCAQKNKDGLTGLGDTTCWYNDKHEELQVLKGLTFFTIEMRKSGDPTEAIKGVARKVYDRMQ*
Ga0068871_1019346161	3300006358	Miscanthus Rhizosphere	VMPMTAAIAAAYKGRCAQKNKDGLTGLGDVTCWYNDKHEELQVLKGLTFFSIEMHRSGDPTEAIKGVARK
Ga0066659_110076822	3300006797	Soil	KGFCAQKGKEGLSGLGEVACWYDDKHEELQVLKGTTFFSIELRAKGNPTEAIKAVAKKVFDQLR*
Ga0075428_1018251041	3300006844	Populus Rhizosphere	GIHSVNLNLIPLNAANAAMYKMMCAQKSKEGLTGLGDTTCWYNAKHGELQVLKGTTFFSIELRRSGDPTEPIKAVARKVYDRLK*
Ga0075433_117545592	3300006852	Populus Rhizosphere	SACEYTGSGIHSVHLNVIPFDAATAGTYKMMCAKKSKEGLTGLGDTTCWYNEKHGELQVLKGLTFFSIELRKSGDPTEAIKAVAQKVYGRLK*
Ga0075424_1017484142	3300006904	Populus Rhizosphere	TGGPSSCEYTGSGIHRVQVILRPFTAATAGVYKTMCAQKGKEGLSGLGDVTCWYNDKHEELQVLKGNAFFSIELRKSGDPTEAIKGVARKVYERLK*
Ga0075424_1022957471	3300006904	Populus Rhizosphere	KGKPSSCEYEGSGIHVVTVTVRPFDAATAAVYKAMCAKKTKEGLTGLGDVACWYNDKHGELQVLKGLTMFSVELRKSGDPTEAIKGVARKVYERVK*
Ga0075436_1005782901	3300006914	Populus Rhizosphere	SAGRSSASPGTTASACEYSGSGIHRINLNVMHFAPDMAAMYRAMCAQKGKEGLSGLGDTACWYNDKHEELQVLKGTTFFSIELRRSGNPTEPIKDVARKVFDRIK*
Ga0075418_106114003	3300009100	Populus Rhizosphere	MCAQKSKDGLTGLGDVACWYNDKHGELQVLKGLTMYSIELRKSGDPTEAIKGVARKVYERVK*
Ga0075418_108400352	3300009100	Populus Rhizosphere	VRGKSKEGLTGLGDTTCWYNAKHGELQVLKGTTFFSIELRRSGDPTEPIKAVARKVYDRLK*
Ga0066709_1000320625	3300009137	Grasslands Soil	LNLMRLSPGTAAVYRTLCAQKGKEGLSGLGDVACWYSDKHEELQVLKGLTFFSIELRKSGDPTEAIKGAAKRVFDQLR*
Ga0111538_114743882	3300009156	Populus Rhizosphere	MAEGPSSCEYSGSGIHSVNLNLIPLNAANAAMYKMMCAQKSKEGLTGLGDTTCWYNAKHGELQVLKGTTFFSIELRRSGDPTEPIKAVARKVYDRLK*
Ga0105249_103869051	3300009553	Switchgrass Rhizosphere	AAMYKAMCAQKTRDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK*
Ga0105347_15120082	3300009609	Soil	KGQPSSCDYEGSGLHHVQLNVMPFDAATAGVYKAMCLKKTREGLTGLGDVACWYNDRHGELQVLKGLTMFSIEMRKSGDPTEAIKGVAKKVYDRVK*
Ga0105252_101043142	3300009678	Soil	MPFDASTAAMYKAMCAKKNKDGLTGLGDVACWYNDKHGELQVLKGQTMFSINLSKSGDPTEAIKGVARKVYGRVK*
Ga0126382_110042362	3300010047	Tropical Forest Soil	SSCEYEGSGIHVVHLNVMHLTPDMASMYKALCAQKGKEGLTGLGDVTCWYNAKHEELQVLKGTTFFSIELRKGGDPTEAIKGVAKQVYGRVK*
Ga0126376_129166741	3300010359	Tropical Forest Soil	MCAQKKKEGLTGLGDTTCWYDEKHEELQVLKGTTFYSIELRRNGDPTEPIKAAAKKVYDRVK*
Ga0126376_132293152	3300010359	Tropical Forest Soil	APGGPSSCEYSGSGIHRVHLNVIPLTGANAAMYKAMCAQKGKAGLTGLGDVTCWYNDKHEELQVLKGLTFLSIELRKSGDPTEAIKGVARNVYGRLK*
Ga0126377_108431362	3300010362	Tropical Forest Soil	SIHLQVRQWTPEMAAAYKSLCDQKGKEGLSGLAPTACWYNDKHEELQVLKETTFFAIELRGSGNPTEPIKAAARKIFDQLK*
Ga0134128_114259711	3300010373	Terrestrial Soil	MCAQKKHDGLTGLGETACWYNDKHAELQMLKGTMFLSIEMQRSGDPTEAIKTVAKKVYDRAK*
Ga0126383_132012281	3300010398	Tropical Forest Soil	LHKVHLNVIPLTAATATIYKGMCAQKDKQGLTGLGDVTCWYNDKHAELQVLKGLTFFSIEFSGKGDPTEAIKGVARKVYDRLK*
Ga0134127_118025771	3300010399	Terrestrial Soil	QSNSIPSAKASSCEYSRSGIHRLNVAVRGFDAATAAMYKTLCAKKGKEGLTGLGDTACWYNDKHDELQVLKGLTFVTIQLRRNGDPTDSIKTVARKIYDRVKS*
Ga0134127_129848432	3300010399	Terrestrial Soil	GEAVAGQPKSTSMAEAASCSYSGSGIHEVTLNVMALTAANAGMYKAMCAKKTKDGLTGLGDVTCWYNDKHEELQVLKGMTFFSIDLRRSGDPTEAIKAVARKVYERVK*
Ga0134123_107080882	3300010403	Terrestrial Soil	MPFDAATAAMYKAMCAKKNRDGLTGLGDVACWYNDKHGELQVLKGLTMFSIEMRKSGDPTEAIKAVARKVYERVK*
Ga0137340_10571092	3300011405	Soil	GKGQPSSCEYEGSGLHRVQLTVMPFDASTAAVYKAMCAKKNKDGLTGLGDVACWYNDKHGELQVLKGPTMFSIEMRKSGDPTESIKAVARKVYERVK*
Ga0137456_11301371	3300011428	Soil	EYSGSGVHKVHVTVTPLTAANVGMYKAMCAQMPKDGLTGLGDAACWYNDKHEELNVVKGQTFFSIELRRSGNPTEAIKGVAKKVYDRMK*
Ga0137355_10663841	3300012163	Soil	NVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKVAARKVYDRVK*
Ga0137350_11214842	3300012166	Soil	ATSMGKGQPSSCEYEGSGLHRVQLTVMPFDASTAAVYKAMCAKKNKDGLTGLGDVACWYNDKHGELQVLKGQTMFSINLSKSGDPTEAIKGVARKVYERVK*
Ga0137376_106980211	3300012208	Vadose Zone Soil	ALGEAVKGPDASNMPDGTTSACEYTGSGLHKVNLNVMHLTPDMASMYKALCAQKSKDGLTGLGDVTCWYNDKHEELQVLKGGTFFSIELRKSGDPTEAIKGVAKKVFDQLK*
Ga0157294_100973162	3300012892	Soil	GLHTVHLNVMHFDAATAAVYKGLCAQKTKDGLTGLGEVSCWYNPKHEELQVLKGTTFLSIQMRRAGDPTEAIKGAAKKIYDALK*
Ga0157282_100983442	3300012904	Soil	EAASCEYSGSGIHSVNLNVMALNAANAGMYKAMCAKKGKDGLTGLGDVTCWYNDKHAELQVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK*
Ga0126375_115527111	3300012948	Tropical Forest Soil	IHSIQLSLWRLPASSLPMYKAMCAEKGAEGLAGLGDVACWYNDKHGELQVAKGTTFFSIELRRNGDPTEAIKAAARKVYDRAK*
Ga0164303_104621081	3300012957	Soil	GIHRVNVVVRVFDASTAAAYKAICAKKGKEGLTGLGDTACWYNDKHEELQAMKGTTFFSIELRRNGDPTDAIKTLAKKIYDRVKS*
Ga0126369_101573784	3300012971	Tropical Forest Soil	SSCEYSGSGLHKVHLNVIPLTAANATIYKGMCAQKDKQGLTGLGDVTCWYNDKHAELQVLKGLTFFSIEFSGKGDPTEAIKGVARKVYDRLK*
Ga0126369_132445072	3300012971	Tropical Forest Soil	VHLNVMHMAADMATMYKSLCAAKGKEGLTGLGDVNCWYNDKHEELQVLKGTTFFSIELRKSGDPTE
Ga0157378_119227091	3300013297	Miscanthus Rhizosphere	GLCAKKGKEGLSGLGDTACWYSDKHEELQVLKGTTFFSIELRRSGDPTDAIKTLAKKIYDRVKP*
Ga0163162_103115003	3300013306	Switchgrass Rhizosphere	CEYTGSGIHKVQLTVYPLTAESAAVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK*
Ga0157375_128073831	3300013308	Miscanthus Rhizosphere	GPDATSMGKGKASACEYEGSGLHRVHLNVMPFDAATAAMYKAMCAKKNRDGLTGLGDVACWYNDKHGELQVLKGLTMFSIEMQKGGDPTEAIKGVARKVYDRVK*
Ga0157375_128855911	3300013308	Miscanthus Rhizosphere	VHLNVIPLTAAGAEIYKAMCAQKGKEGLTGLGDATCWYNDKHGELQVLKGLTFFSIELRKSGDPTEAIKGVARKVYNRVK*
Ga0157375_135999852	3300013308	Miscanthus Rhizosphere	DQAAIYKGLCAQKSKDGLTGLGDVTCWYDNRHEELQVLKGTTMFSIELRVKGNPTETIKGVAKKVYDRLR*
Ga0180083_10755451	3300014875	Soil	RVQLTVMPFDASTAAMYKAMCAKKNKDGLTGLGDVACWYNDKHGELQVLKGQTMFSINLSKSGDPTEAIKGVARKVYGRVK*
Ga0173483_105702421	3300015077	Soil	ALGEAVKGPNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK*
Ga0132256_1004508311	3300015372	Arabidopsis Rhizosphere	PLTAEGAGIYKAMCAQKGKEGLTGLGDTTCWYNDQHGELQVLKGLTFFSIELRKSGDPTEAIKGVARKVYDRLK*
Ga0132257_1007511621	3300015373	Arabidopsis Rhizosphere	SARPNGPSSCEYEGSGIHVVHLNVIPFTAATAATYQGLCAKKSKEGLTGLGDTTCWYDDKHGELQVLKGTTFFSIELRKSGDPTEAIKGVARKVYDRLK*
Ga0187824_102685121	3300017927	Freshwater Sediment	SSCEYAGSGIHVVRLNVIPLTAATAGMYKGLCAQKGKEGLTGLGDVTCWYNDKHGELQVLKGLTFFSIELRKAGDPTEAIKGVARKVYDRVK
Ga0184628_102530892	3300018083	Groundwater Sediment	AAMYKAMCAKKNKDGLTGLGDVTCWYNDKHGELQVLKGQTMFSINLSKSGDPTEAIKVVTRKVYERVK
Ga0184628_105928032	3300018083	Groundwater Sediment	DLRVVNVMPLNNQTAAVYKGLCGKKTKDGLTGLGDVTCWYNEKHGELQVLKGLTFFSIQLTKAGDPTEAIKAVARKVYDRLK
Ga0247797_10416642	3300023057	Soil	KGPNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK
Ga0247794_102220322	3300024055	Soil	YKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK
Ga0207642_104255111	3300025899	Miscanthus Rhizosphere	NVMPFTAETAAMYKTRSAQKGKDGLTGLGDAAIWYNDKHGELQVLKGLTFFSIQLRKSGDPTEAIKTVARKVYERMK
Ga0207660_108484141	3300025917	Corn Rhizosphere	SCDYEGSGIHHVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK
Ga0207701_105829382	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAEAASCEYSGSGIHSVNLNVMALNAANAGMYKAMCAKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK
Ga0207712_106099821	3300025961	Switchgrass Rhizosphere	AKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK
Ga0207648_108269742	3300026089	Miscanthus Rhizosphere	ATNSPTGSSSCEYSGSGIHVVHLNVMPFTAETAAMYKTRSAQKGKDGLTGLGDAAIWYNDKHGELQVLKGLTFFSIQLRKSGDPTEAIKTVARKVYERMK
Ga0207676_122744661	3300026095	Switchgrass Rhizosphere	ESAAVYKGLCAKKNKDGLTGLGDATCWYNEKHEELQVLKGFTVLMIEVHRSGDPTEAIKGVARKVYDRVK
Ga0268265_105070322	3300028380	Switchgrass Rhizosphere	SMAEAASCEYSGSGIHSVNLNVMALNAANAGMYKAMCAKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK
Ga0307503_105287732	3300028802	Soil	KVHLNVMPLNNQTAAVYKGLCAKKTKDGLTGLGDVTCWYNEKHGELQVLKGLTFFSIVLSKSGDPTEAIKGVARKVYDRLK
Ga0307310_107112601	3300028824	Soil	VQLTVRPLSAAEAAMYTSLCAQKKKDGLTGLGNVTCWYNDKHEELQVLKGLTFFSIEIRRGGDPTEAIKAAAQKVYARVK
Ga0247827_107038482	3300028889	Soil	YKAMCAKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK
Ga0310886_100932512	3300031562	Soil	ALGEAVAGQPRSTSMAEAASCEYSGSGIHSVNLNVMALNAANAGMYKAMCAKKGKDGLTGLGDVTCWYNDKHAELHVLKGMTFFSIELRRSGDPTEAIKAVARKVYERVK
Ga0310901_104347711	3300031940	Soil	IPFDPATAAVYKAKCAQKSKDGLTGLGDVTCWYNDKHGELQVLKGNTFFSIELRKSGDPTEAIKAVARKVYERMK
Ga0310885_100374751	3300031943	Soil	GIHVVHLNVSPFDPATAAVYKAKCAQKSKDGLTGLGDVTCWYNDKHGELQVLKGNTFFSIELRKSGDPTEAIKAVARKVYERMK
Ga0310903_100139753	3300032000	Soil	PNATSMGKGKASACEYEGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK
Ga0310902_105640161	3300032012	Soil	VYKAKCAQKSKDGLTGLGDVTCWYNDKHGELQVLKGNTFFSIELRKSGDPTEAIKAVARKVYERMK
Ga0310906_100669044	3300032013	Soil	YKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYDRVK
Ga0310889_100602221	3300032179	Soil	EYVGSGLHRVQLNVMPMDTATAAMYKAMCLKKTREGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYERVK
Ga0335085_108540062	3300032770	Soil	ASMYKAMCAQKTKDGLTGLGDTTCWYNDKHEELQVLKGTTFFSIQMRRSGDPTEAIKAAARKVYDRMK
Ga0364943_0078561_60_287	3300034354	Sediment	MPLTNANAAMYKAMCAQKGKQGLTGLGDVTCWYNDQHGELQVLKGMTFFSIELRKSGDPTEAIKGVARKVYDRLK
Ga0364943_0094402_587_883	3300034354	Sediment	MGKGKPSSCEYEGSGIHRVQLTVMPFDATTAAMYKAMCAKKNKDGLTGLGDVTCWYNDKHGELQVLKGQTMFSINLSKSGDPTEAIKVVTRKVYERVK
Ga0314780_190963_3_293	3300034659	Soil	KGKASACEYEGSGLNRVQLNVMPFDAATAAMYKAMCLKKTRDGLTGLGDVACWYNDKHGELQVLKGLTMFSIEMQKGGDPTEAIKGVARKVYDRVK
Ga0314786_116920_152_448	3300034664	Soil	MGKGKASACEYEGSGLNRVQLNVMPFDAATAAMYKAMCLKKTRDGLTGLGDVACWYNDKHGELQVLKGMTMFSIDLSKSGDPTEAIKGVARKVYERVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099366

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences