Metagenome / Metatranscriptome Family F099365

Basic Information
Family ID	F099365
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	49 residues
Representative Sequence	MLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Number of Associated Samples	96
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	99.03 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.388 % of family members)
Environment Ontology (ENVO)	Unclassified (28.155 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.864 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00069	Pkinase	66.99
PF07714	PK_Tyr_Ser-Thr	13.59
PF14332	DUF4388	1.94
PF02423	OCD_Mu_crystall	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	322.33
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.52 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	45.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	35.92 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	45.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	35.92 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	45.63 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	22.33 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7.77 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	45.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.33 %
Unclassified	root	N/A	1.94 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	45.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.33 %
Unclassified	root	N/A	1.94 %
Sorangiineae incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis	0.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	45.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.33 %
Unclassified	root	N/A	1.94 %
Minicystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis	0.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	45.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.33 %
Unclassified	root	N/A	1.94 %
Minicystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120265071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	957	Open in IMG/M
3300004047\|Ga0055499_10049905	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300004157\|Ga0062590_102613567	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005329\|Ga0070683_102394882	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005330\|Ga0070690_100014583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4664	Open in IMG/M
3300005331\|Ga0070670_102107695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	520	Open in IMG/M
3300005334\|Ga0068869_100725114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	849	Open in IMG/M
3300005367\|Ga0070667_101608698	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	611	Open in IMG/M
3300005406\|Ga0070703_10215607	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005438\|Ga0070701_11218141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	535	Open in IMG/M
3300005458\|Ga0070681_10704274	Not Available	926	Open in IMG/M
3300005458\|Ga0070681_10891065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	808	Open in IMG/M
3300005466\|Ga0070685_10233524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1211	Open in IMG/M
3300005543\|Ga0070672_100275181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1422	Open in IMG/M
3300005546\|Ga0070696_101234356	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005602\|Ga0070762_10244275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1114	Open in IMG/M
3300005834\|Ga0068851_10306125	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005842\|Ga0068858_101031363	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	806	Open in IMG/M
3300006358\|Ga0068871_101969754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	556	Open in IMG/M
3300006794\|Ga0066658_10292793	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300006954\|Ga0079219_11379009	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	628	Open in IMG/M
3300009094\|Ga0111539_12264092	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	630	Open in IMG/M
3300009176\|Ga0105242_11042008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M
3300009176\|Ga0105242_12274887	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	588	Open in IMG/M
3300009545\|Ga0105237_10926839	Not Available	878	Open in IMG/M
3300010333\|Ga0134080_10687592	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	506	Open in IMG/M
3300010366\|Ga0126379_13279676	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010371\|Ga0134125_11727751	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	681	Open in IMG/M
3300010397\|Ga0134124_10329418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1432	Open in IMG/M
3300010399\|Ga0134127_10614677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1117	Open in IMG/M
3300010400\|Ga0134122_11045690	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	804	Open in IMG/M
3300010401\|Ga0134121_11141764	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	775	Open in IMG/M
3300010403\|Ga0134123_12636033	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	570	Open in IMG/M
3300010867\|Ga0126347_1279310	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	618	Open in IMG/M
3300010869\|Ga0126359_1140094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1203	Open in IMG/M
3300011445\|Ga0137427_10032293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2056	Open in IMG/M
3300012232\|Ga0137435_1210301	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	595	Open in IMG/M
3300012898\|Ga0157293_10062096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300012899\|Ga0157299_10342288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300012902\|Ga0157291_10192406	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	640	Open in IMG/M
3300012904\|Ga0157282_10210351	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	634	Open in IMG/M
3300012910\|Ga0157308_10164545	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	720	Open in IMG/M
3300012984\|Ga0164309_11521393	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	573	Open in IMG/M
3300013105\|Ga0157369_10757886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	998	Open in IMG/M
3300013296\|Ga0157374_11192282	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	783	Open in IMG/M
3300013297\|Ga0157378_11735523	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	672	Open in IMG/M
3300013308\|Ga0157375_10865710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1049	Open in IMG/M
3300013308\|Ga0157375_12288546	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300014878\|Ga0180065_1094004	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	680	Open in IMG/M
3300014969\|Ga0157376_12261791	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	583	Open in IMG/M
3300014969\|Ga0157376_12607487	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	545	Open in IMG/M
3300015245\|Ga0137409_10149417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2138	Open in IMG/M
3300015372\|Ga0132256_100594143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1221	Open in IMG/M
3300015374\|Ga0132255_100366555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2090	Open in IMG/M
3300016270\|Ga0182036_11324165	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	601	Open in IMG/M
3300018000\|Ga0184604_10364223	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	515	Open in IMG/M
3300018060\|Ga0187765_11099246	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300019876\|Ga0193703_1073308	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	505	Open in IMG/M
3300020005\|Ga0193697_1031838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1318	Open in IMG/M
3300021180\|Ga0210396_10936905	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300021402\|Ga0210385_11069338	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	620	Open in IMG/M
3300021404\|Ga0210389_10708618	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	788	Open in IMG/M
3300021475\|Ga0210392_10324595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1109	Open in IMG/M
3300024224\|Ga0247673_1019429	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	903	Open in IMG/M
3300024251\|Ga0247679_1022425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1071	Open in IMG/M
3300025912\|Ga0207707_10219061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1657	Open in IMG/M
3300025912\|Ga0207707_10669393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	874	Open in IMG/M
3300025925\|Ga0207650_11283414	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025930\|Ga0207701_10666989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	882	Open in IMG/M
3300025931\|Ga0207644_10845064	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	766	Open in IMG/M
3300025935\|Ga0207709_11178755	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	631	Open in IMG/M
3300025944\|Ga0207661_10713232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	923	Open in IMG/M
3300025944\|Ga0207661_11031601	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	757	Open in IMG/M
3300026078\|Ga0207702_10149465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2123	Open in IMG/M
3300026078\|Ga0207702_11134204	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	776	Open in IMG/M
3300026215\|Ga0209849_1057442	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	682	Open in IMG/M
3300027867\|Ga0209167_10111306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1410	Open in IMG/M
3300027884\|Ga0209275_10099719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1485	Open in IMG/M
3300028072\|Ga0247675_1046986	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	639	Open in IMG/M
3300028592\|Ga0247822_11090440	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	663	Open in IMG/M
3300031344\|Ga0265316_10017045	All Organisms → cellular organisms → Bacteria	6288	Open in IMG/M
3300031366\|Ga0307506_10307819	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	622	Open in IMG/M
3300031546\|Ga0318538_10019205	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	3017	Open in IMG/M
3300031572\|Ga0318515_10374151	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	763	Open in IMG/M
3300031668\|Ga0318542_10338296	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	773	Open in IMG/M
3300031680\|Ga0318574_10789148	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	557	Open in IMG/M
3300031747\|Ga0318502_10652281	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	635	Open in IMG/M
3300031765\|Ga0318554_10796504	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	528	Open in IMG/M
3300031782\|Ga0318552_10083586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1559	Open in IMG/M
3300031793\|Ga0318548_10679170	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031798\|Ga0318523_10211072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	970	Open in IMG/M
3300031819\|Ga0318568_10498705	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	759	Open in IMG/M
3300031854\|Ga0310904_10589508	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031890\|Ga0306925_10808301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	972	Open in IMG/M
3300031908\|Ga0310900_10967051	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031938\|Ga0308175_101951765	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	658	Open in IMG/M
3300031944\|Ga0310884_10662531	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031996\|Ga0308176_12402482	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	562	Open in IMG/M
3300032025\|Ga0318507_10399678	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	598	Open in IMG/M
3300032043\|Ga0318556_10648087	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	550	Open in IMG/M
3300032052\|Ga0318506_10539452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	517	Open in IMG/M
3300032067\|Ga0318524_10296810	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	836	Open in IMG/M
3300032211\|Ga0310896_10801506	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	539	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.76%
Host-Associated	Host-Associated	25.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.90%
Plants	Host-Associated → Plants	25.24%
Aquatic	Environmental → Aquatic	4.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.83%
Sediment	Environmental → Aquatic → Sediment	3.88%
Marine	Environmental → Aquatic → Marine	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.40%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099365

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1202650712	3300002568	Soil	EGKRILSTTAATEESQARARRAAYRTLELAADMNEPIQLRKILLKKR*
Ga0055499_100499051	3300004047	Natural And Restored Wetlands	QEIVGEERRYYEDGRRMLIAAASAEEAQARARRAAYRTLELASETAEPLQLRRALGGRRR
Ga0062590_1026135672	3300004157	Soil	IMTQERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0070683_1023948821	3300005329	Corn Rhizosphere	SYYDLGKRLLIEATASEESQARARRAAYRTLELAGEGVEPNQLRKAFGKRRPLV*
Ga0070690_1000145834	3300005330	Switchgrass Rhizosphere	QMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGRRR*
Ga0070670_1021076951	3300005331	Switchgrass Rhizosphere	EQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0068869_1007251142	3300005334	Miscanthus Rhizosphere	RYYEQGKQMLVAAVAIEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0070667_1016086982	3300005367	Switchgrass Rhizosphere	LVAAVPTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070703_102156071	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LIAATTTEEAQARARRAAYRTLELAGETAEPLQLRRALGRRR*
Ga0070701_112181411	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	YEQGKGMLAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070681_107042741	3300005458	Corn Rhizosphere	YETGKAMLVVAVASEESQARARRSAYRTLELAGETVEPLQLRKALGKRR*
Ga0070681_108910651	3300005458	Corn Rhizosphere	EGRLMLIASATAEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR*
Ga0070685_102335242	3300005466	Switchgrass Rhizosphere	RYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070672_1002751811	3300005543	Miscanthus Rhizosphere	TEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0070696_1012343561	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	YEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070762_102442752	3300005602	Soil	GATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR*
Ga0068851_103061252	3300005834	Corn Rhizosphere	VEMVGEERGYYELGKRLLVEATASEESQARARRAAYRTLELAGEGVEPNQLRKAFGKRRPLV*
Ga0068858_1010313632	3300005842	Switchgrass Rhizosphere	TEESQARARRAAYRTLELAGETVEPLQLRKALGRRR*
Ga0068871_1019697541	3300006358	Miscanthus Rhizosphere	SARLLAEISDEERRYYEQGKGMLAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0066658_102927932	3300006794	Soil	MTQERRYYETGKAMLVAAVVSEESQARARRAAYRTLELAGETVEPLQLRKALGRRR*
Ga0079219_113790092	3300006954	Agricultural Soil	VGVTASEESQARARRSAYRTLELATEMSEPLQLRKAMAKRR*
Ga0111539_122640921	3300009094	Populus Rhizosphere	ERGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0105242_110420082	3300009176	Miscanthus Rhizosphere	AAVPTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0105242_122748872	3300009176	Miscanthus Rhizosphere	GVEIMTQERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0105237_109268391	3300009545	Corn Rhizosphere	TILTSERRYYEEGKRLLAQVATNEESQARGRRSCYRTLELATEMVEPLALRKLLPKKR*
Ga0134080_106875922	3300010333	Grasslands Soil	GKQILVAAVATEESQARARRAAYRTLELAGETLEPLQLRKALGKRR*
Ga0126379_132796762	3300010366	Tropical Forest Soil	LVASAVNEESQARARRSAYRTLELAGEMAEPLQLRKVLPKRR*
Ga0134125_117277512	3300010371	Terrestrial Soil	GAEIAEEERRYYEEGQRLLVGATVTEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0134124_103294182	3300010397	Terrestrial Soil	RYYEEGQRLLVAATVTEESQARARRAAYRTLELAGETVEPLALRKTLGKRK*
Ga0134127_106146772	3300010399	Terrestrial Soil	ATNEESQARGRRSAYRTLELANEMMEPLALRKILPKKR*
Ga0134122_110456902	3300010400	Terrestrial Soil	AATEESQARARRAAYRTLELVAEMHEPMQLRKILLKRR*
Ga0134121_111417641	3300010401	Terrestrial Soil	EESQARARRAAYRTLELAGETVEPLALRKTLGKRK*
Ga0134123_126360331	3300010403	Terrestrial Soil	VATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0126347_12793102	3300010867	Boreal Forest Soil	DDLLSQERRYYEEGKGLLALVALNEESQARGRRSAYRTLELATEATEPLQLRKLLPKKR*
Ga0126359_11400942	3300010869	Boreal Forest Soil	RYYEEGKRMLIAVTTTEESQARARRSAYRTLELAGETVEPLALRKTLGKRR*
Ga0137427_100322931	3300011445	Soil	MLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRRSG*
Ga0137435_12103012	3300012232	Soil	ATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0157293_100620961	3300012898	Soil	LVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0157299_103422882	3300012899	Soil	GVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0157291_101924061	3300012902	Soil	EIMTQERRYYELGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRRSG
Ga0157282_102103512	3300012904	Soil	VAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRRSG*
Ga0157308_101645451	3300012910	Soil	MLVAAVASEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0164309_115213932	3300012984	Soil	LAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0157369_107578861	3300013105	Corn Rhizosphere	EESQARARRAAYRTLELAGETVEPLALRKTLGKRR*
Ga0157374_111922822	3300013296	Miscanthus Rhizosphere	SASTEESQARARRAAYRTLELAADMHEPIQLRKILLKKR*
Ga0157378_117355231	3300013297	Miscanthus Rhizosphere	EESQARARRAAYRTLELAADMNEPIQLRKILLKKR*
Ga0157375_108657101	3300013308	Miscanthus Rhizosphere	ERRYYEEGQRLLVAATVTEESQARARRAAYRTLELAGETVEPLALRKTLGKRK*
Ga0157375_122885461	3300013308	Miscanthus Rhizosphere	ATNEESQARGRRSAYRTLELATEMAEPLALRKLLPKRR*
Ga0180065_10940042	3300014878	Soil	RYYEQGKQMLVAAVASEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0157376_122617911	3300014969	Miscanthus Rhizosphere	RRYYEQGKGMLAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0157376_126074871	3300014969	Miscanthus Rhizosphere	DEERRYYEQGKGMLAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0137409_101494171	3300015245	Vadose Zone Soil	QVALNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR*
Ga0132256_1005941431	3300015372	Arabidopsis Rhizosphere	RRYYEQGKQMLVASVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0132255_1003665551	3300015374	Arabidopsis Rhizosphere	IMGQERRYYESGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0182036_113241651	3300016270	Soil	LLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0184604_103642231	3300018000	Groundwater Sediment	VAAVTTEESQARARRAAYRTLELAGETAEPLQLRKALGRRR
Ga0187765_110992462	3300018060	Tropical Peatland	ALVASASNEESQARARRSAYRTLELAGEMAEPLQIRKALPKRR
Ga0193703_10733082	3300019876	Soil	AVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0193697_10318381	3300020005	Soil	TEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0210396_109369051	3300021180	Soil	STDFLDEERRYYDEGRRMLIASTATEESQARARRAAYRTLELAGETVEPLQLRKTLGKRR
Ga0210385_110693382	3300021402	Soil	GLLASVALNEESQARGRRSAYRTLELATEATEPLQLRKLLPKRR
Ga0210389_107086181	3300021404	Soil	RLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0210392_103245952	3300021475	Soil	KGLLASVALNEESQARGRRSAYRTLELATEATEPLQLRKLLPKKR
Ga0247673_10194291	3300024224	Soil	YEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0247679_10224251	3300024251	Soil	MLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0207707_102190612	3300025912	Corn Rhizosphere	RYYETGKAMLVVAVASEESQARARRSAYRTLELAGETVEPLQLRKALGKRR
Ga0207707_106693932	3300025912	Corn Rhizosphere	DEGRLMLIASATAEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR
Ga0207650_112834141	3300025925	Switchgrass Rhizosphere	LGVDMLSEERRYYELGKRMLTAVATTEESQARARRAAYRTLDLAGETAEPLQLRKALGKR
Ga0207701_106669891	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0207644_108450641	3300025931	Switchgrass Rhizosphere	LVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0207709_111787552	3300025935	Miscanthus Rhizosphere	QERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0207661_107132321	3300025944	Corn Rhizosphere	YEQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0207661_110316012	3300025944	Corn Rhizosphere	EEGKRILSATAATEESQARARRAAYRTLELAGDMNEPIQLRKILLKKR
Ga0207702_101494652	3300026078	Corn Rhizosphere	TDMVAEERRYYDEGRVLLTGAATTEESQARGRRAAYRTLELAGETVEPLALRRSLGRRR
Ga0207702_111342042	3300026078	Corn Rhizosphere	LRLLVGATVTEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0209849_10574421	3300026215	Soil	SLRYYEEGRLMLAAVATNEESQARGRRSAYRTLELATEMVEPLQLRKLLRKRR
Ga0209167_101113062	3300027867	Surface Soil	EGLRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0209275_100997192	3300027884	Soil	GATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0247675_10469861	3300028072	Soil	AATEESQARARRAAYRTLELAGDMNEPIQLRKILLKKR
Ga0247822_110904401	3300028592	Soil	QMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGRRR
Ga0265316_100170457	3300031344	Rhizosphere	EEGKRLLTAVALNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR
Ga0307506_103078191	3300031366	Soil	QERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0318538_100192053	3300031546	Soil	IVEEERRYYEEGMRLLIGATATEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318515_103741511	3300031572	Soil	YYEEGMRLLIGATATEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318542_103382962	3300031668	Soil	YEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318574_107891481	3300031680	Soil	TEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0318502_106522811	3300031747	Soil	QERRYYEEGKRLLTAAATNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR
Ga0318554_107965042	3300031765	Soil	LSEERRYYDEGKRMLIAAAGVEESQARARRAAYRTLELAMETAEPLQLRKALGKRR
Ga0318552_100835861	3300031782	Soil	GTEESQARARRAAFRTLELAGETVEPLQLRKAFGRRRSLV
Ga0318548_106791701	3300031793	Soil	VEEERRYYEEGMRLLIGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0318523_102110722	3300031798	Soil	GKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318568_104987051	3300031819	Soil	LGVEILGEERRYYEDGKQLLTAAAGTEESQARARRAAFRTLELAGETVEPLQLRKAFGRRRSLV
Ga0310904_105895081	3300031854	Soil	RLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0306925_108083011	3300031890	Soil	AGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0310900_109670511	3300031908	Soil	IMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0308175_1019517652	3300031938	Soil	LRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0310884_106625311	3300031944	Soil	RLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0308176_124024821	3300031996	Soil	RLLGTDMVADERRYYDEGRVLLTGAATTEESQARGRRSAYRTLELAGETVEPLALRRSLGRRR
Ga0318507_103996781	3300032025	Soil	EERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318556_106480872	3300032043	Soil	LLTQERRYYEEGKRLLMAAAQNEESQARGRRSAYRTLELADDMVEPLQLRKLLPKKR
Ga0318506_105394521	3300032052	Soil	LLTAVAVNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKRR
Ga0318524_102968102	3300032067	Soil	TLLTQERRYYEEGKRLLMAAAQNEESQARGRRSAYRTLELADDMVEPLQLRKLLPKRR
Ga0310896_108015061	3300032211	Soil	KQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR

Hidden Markov Model


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