Metagenome / Metatranscriptome Family F099300

Basic Information
Family ID	F099300
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	49 residues
Representative Sequence	MGVMKELHLEITTCDLCYGTGWLYFGNSEDFDTESCDCNPHQLFITKENN
Number of Associated Samples	80
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.44 %
% of genes near scaffold ends (potentially truncated)	21.36 %
% of genes from short scaffolds (< 2000 bps)	45.63 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (78.641 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.417 % of family members)
Environment Ontology (ENVO)	Unclassified (50.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.223 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1JGI12421J11937_100417546 2B570J14230_100108091 3B570J29648_1064013 4B570J29032_1088081033 5B570J40625_10002558519 6B570J40625_10003702811 7B570J40625_1000485127 8B570J40625_1000729967 9B570J40625_1001095174 10B570J40625_1007268851 11JGI25917J50250_10114493 12JGI25922J50271_100113679 13JGI25922J50271_100145083 14JGI25922J50271_100833012 15Ga0066182_101100772 16Ga0066179_102198663 17Ga0007748_116439202 18Ga0070374_100518032 19Ga0070374_102035243 20Ga0070374_103854482 21Ga0070374_106401163 22Ga0068876_101996143 23Ga0049080_102471242 24Ga0078894_112452211 25Ga0070743_1000196013 26Ga0070743_100854972 27Ga0070744_100194812 28Ga0070744_100345592 29Ga0102873_10045431 30Ga0102873_10163582 31Ga0102874_10162322 32Ga0102877_10084081 33Ga0102819_10971792 34Ga0102914_10778145 35Ga0102897_10745162 36Ga0102871_10547151 37Ga0102902_12446752 38Ga0114340_10366734 39Ga0114341_100218562 40Ga0114341_100364574 41Ga0114341_105149472 42Ga0114346_10189386 43Ga0114346_10862126 44Ga0114336_1001877102 45Ga0102831_10149256 46Ga0114978_1000867813 47Ga0114981_101902855 48Ga0114982_100852410 49Ga0114982_10751102 50Ga0102883_10725774 51Ga0136551_10017598 52Ga0137575_100356491 53Ga0153801_100113111 54Ga0157498_10008113 55Ga0207193_102596711 56Ga0211732_12464154 57Ga0211736_104181607 58Ga0211733_112503853 59Ga0211729_103996975 60Ga0208326_10001029 61Ga0208697_100124111 62Ga0208858_10437513 63Ga0208232_10040826 64Ga0208224_10057194 65Ga0207942_10062986 66Ga0208855_10022052 67Ga0213921_10047482 68Ga0222713_100597797 69Ga0214917_103933641 70Ga0214921_1000471633 71Ga0244777_1000102023 72Ga0244777_109015862 73Ga0244775_100703862 74Ga0244775_100907392 75Ga0244775_102336932 76Ga0244776_1000088949 77Ga0244776_106973264 78Ga0256304_10872911 79Ga0208026_10071376 80Ga0208173_10127304 81Ga0208810_10406685 82Ga0209552_100030719 83Ga0209651_100018725 84Ga0208133_10934701 85Ga0209135_10393152 86Ga0209551_100011837 87Ga0209599_1000020036 88Ga0209617_100787262 89Ga0209444_101470324 90Ga0209500_1000805411 91Ga0209358_101274741 92Ga0209358_105673162 93Ga0247723_100200123 94Ga0247723_100229112 95Ga0315909_1000133046 96Ga0315903_109943951 97Ga0334980_0000095_39205_39357 98Ga0334994_0031988_2403_2555 99Ga0335019_0008917_5266_5418 100Ga0335012_0050412_945_1097 101Ga0335035_0626126_428_565 102Ga0335016_0640419_2_157 103Ga0335065_0038124_3265_3372
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1JGI12421J11937_100417546 2B570J14230_100108091 3JGI25922J50271_100145083 4Ga0078894_112452211 5Ga0102873_10045431 6Ga0102871_10547151 7Ga0114982_100852410 8Ga0137575_100356491 9Ga0256304_10872911
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1JGI12421J11937_100417546 2B570J14230_100108091 3JGI25922J50271_100145083 4Ga0078894_112452211 5Ga0102873_10045431 6Ga0102871_10547151 7Ga0114982_100852410 8Ga0137575_100356491 9Ga0256304_10872911
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.00% Coil/Unstructured: 66.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF06067	DUF932	8.74
PF08007	JmjC_2	0.97
PF05257	CHAP	0.97
PF01930	Cas_Cas4	0.97
PF01391	Collagen	0.97
PF13640	2OG-FeII_Oxy_3	0.97
PF03793	PASTA	0.97
PF01844	HNH	0.97
PF04860	Phage_portal	0.97
PF00512	HisKA	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	0.97
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.97

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	21.36 %
Unclassified	root	N/A	78.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.97 %
Unclassified	root	N/A	78.64 %
Viruses	superkingdom	All Organisms → Viruses	20.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.97 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.59 %
Unclassified	root	N/A	78.64 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Unclassified	root	N/A	78.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.59 %
Unclassified	root	N/A	78.64 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.59 %
Unclassified	root	N/A	78.64 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.59 %
Unclassified	root	N/A	78.64 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.59 %
Unclassified	root	N/A	78.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.83 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10041754	Not Available	1554	Open in IMG/M
3300001282\|B570J14230_10010809	Not Available	3482	Open in IMG/M
3300002382\|B570J29648_106401	Not Available	601	Open in IMG/M
3300002408\|B570J29032_108808103	Not Available	514	Open in IMG/M
3300002835\|B570J40625_100025585	Not Available	9621	Open in IMG/M
3300002835\|B570J40625_100037028	Not Available	7404	Open in IMG/M
3300002835\|B570J40625_100048512	Not Available	6105	Open in IMG/M
3300002835\|B570J40625_100072996	Not Available	4527	Open in IMG/M
3300002835\|B570J40625_100109517	Not Available	3355	Open in IMG/M
3300002835\|B570J40625_100726885	Not Available	884	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.15%
Terrestrial	Environmental → Terrestrial	4.85%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.85%
Freshwater	Environmental → Aquatic → Freshwater	68.93%
Marine	Environmental → Aquatic → Marine	26.21%

Habitat	Taxonomy	Distribution
Creek	Environmental → Aquatic → Freshwater → Creek	0.97%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.48%
Lake	Environmental → Aquatic → Freshwater → Lake	25.24%
Lentic	Environmental → Aquatic → Freshwater → Lentic	37.86%
Pond	Environmental → Aquatic → Freshwater → Pond	1.94%
River	Environmental → Aquatic → Freshwater → River	0.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.94%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	14.56%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	17.48%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.27%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	22.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.91%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.94%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	17.48%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	7.77%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	13.59%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.97%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.97%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.42%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.91%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.97%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.80%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.97%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	1.94%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002382	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004769	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 80 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100417546	3300000756	Freshwater And Sediment	MGVMKELHLEITTCENCYGNGWLYFGNGEDFDTEACDCNPHQLFITKENN*
B570J14230_100108091	3300001282	Freshwater	MAKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFIT
B570J29648_1064013	3300002382	Freshwater	YLMGVMKELHLEITTCELCYGTGWLHFGNSLDYDTESCDCNPHQLFITKENN*
B570J29032_1088081033	3300002408	Freshwater	MSKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKE
B570J40625_10002558519	3300002835	Freshwater	MGVMKELHLEITTCELCYGTGWLHFGNSLDYDTESCDCNPHQLFITKENN*
B570J40625_10003702811	3300002835	Freshwater	MAKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
B570J40625_1000485127	3300002835	Freshwater	MGTMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
B570J40625_1000729967	3300002835	Freshwater	MSKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
B570J40625_1001095174	3300002835	Freshwater	MAKMKTLYTEITTCDLCYGTGWLYFGNGEDFDTESCDCNPHQLFITKEND*
B570J40625_1007268851	3300002835	Freshwater	MGKMKELHLDITTCDLCYGTGWLYFGNETDFDTESCDCNPHQLFITKENN*
JGI25917J50250_10114493	3300003395	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGNSEDYDTESCDCNPHQLFITKEND*
JGI25922J50271_100113679	3300003413	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGNSLDYDTENCDCNPHQLFITKENY*
JGI25922J50271_100145083	3300003413	Freshwater Lake	MGKMKELYSEIITCDLCFGTGWLFFGNGEDYDTESCTCNPHQLFITKEND*
JGI25922J50271_100833012	3300003413	Freshwater Lake	MGVMKELHLDITTCDLCYGVGWLYFGNGTDFDTESCDCNPHQLFITKENN*
Ga0066182_101100772	3300004125	Freshwater Lake	MGVMKTLYTEIENCEKCFGQGWQFWAQGEDFDTESCDCNPHQLFITKENY*
Ga0066179_102198663	3300004126	Freshwater Lake	LMGVMKELHLEITTCDLCYGTGWLHFGNETDFDTESCDCNPHQLFITKENN*
Ga0007748_116439202	3300004769	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGTSEDYDTESCDCNPHQLFITKENN*
Ga0070374_100518032	3300005517	Freshwater Lake	MAKMKTLMTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0070374_102035243	3300005517	Freshwater Lake	MGKMKELQLEITTCDLCYGTGWLYFGNETDFDTESCDCNPHQLFITKENN*
Ga0070374_103854482	3300005517	Freshwater Lake	MGKMKELQLDITTCDLCYGTGWLYFGNGIDFDTESCDCNPHQLFITKENN*
Ga0070374_106401163	3300005517	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGNSEDYDTESCDCNPHQLFITKENN*
Ga0068876_101996143	3300005527	Freshwater Lake	MAKMKTLITEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0049080_102471242	3300005582	Freshwater Lentic	MGVMKELHLEITTCDLCYGTGWLHFGNSLDYDTENCDCNPHQLFITKEND*
Ga0078894_112452211	3300005662	Freshwater Lake	DLCYGTGWLFFGNGEDFDTESCDCNPHQLFITKENN*
Ga0070743_1000196013	3300005941	Estuarine	MGVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0070743_100854972	3300005941	Estuarine	MGVMKELHLEITTCDLCYGTGWLHFGNSLDYDTENCDCNPHQLFITKENN*
Ga0070744_100194812	3300006484	Estuarine	MGVMKTLYTEIENCEKCFGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0070744_100345592	3300006484	Estuarine	MGVMKELHLEITTCELCYGTGWLHFGNSEDYDTESCDCNPHQLFITKENN*
Ga0102873_10045431	3300007545	Estuarine	IENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0102873_10163582	3300007545	Estuarine	MGKVKEMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFITKEND*
Ga0102874_10162322	3300007546	Estuarine	MGKVKEMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFTTKEAD*
Ga0102877_10084081	3300007548	Estuarine	MGKVKEMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFTTKESD*
Ga0102819_10971792	3300007553	Estuarine	MKELHLEITTCDLCYGTGWLHFGNGIDFDTESCDCNPHQLFITKENN*
Ga0102914_10778145	3300007561	Estuarine	MKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0102897_10745162	3300007617	Estuarine	MGVMKELHLEITTCELCYGTGWLHFGNSEDYDTESCDCNPHQLFITKENY*
Ga0102871_10547151	3300007620	Estuarine	MGKVKEMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNP
Ga0102902_12446752	3300007644	Estuarine	MGVMKELHLEITTCELCYGTGWLHFGNSEDYDTESCDCNPHQLFITKEND*
Ga0114340_10366734	3300008107	Freshwater, Plankton	MGVMKTLYTKIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0114341_100218562	3300008108	Freshwater, Plankton	MGVMKELHLEITTCDLCYGTGWLYFGNSEDFDTESCDCNPHQLFITKENN*
Ga0114341_100364574	3300008108	Freshwater, Plankton	MGVMKTLYTEIENCQMCFGQGWHYWAQGEDFDTESCDCNPHQLFITKEDN*
Ga0114341_105149472	3300008108	Freshwater, Plankton	MKELHLEITTCDLCYGTGWLYFGNETDFDTESCDCNPHQLFITKENN*
Ga0114346_10189386	3300008113	Freshwater, Plankton	MAKMKTLYTEITTCDLCYGTGWLFFGNGEDFDTESCDCNPHQLFITKEND*
Ga0114346_10862126	3300008113	Freshwater, Plankton	MGVMKTLYTEIENCENCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0114336_1001877102	3300008261	Freshwater, Plankton	MGVMKELHLEITTCDLCYGTGWLHFGTSEDYDTESCDCNPHQLFITKEND*
Ga0102831_10149256	3300008996	Estuarine	MGVMKELHLEITTCDLCYGTGWLHFGNEIDFDTESCDCNPHQLFITKENN*
Ga0114978_1000867813	3300009159	Freshwater Lake	MGVMKELHLDITTCDLCYGVGWLYFGNGIDFDTESCDCNPHQLFITKENN*
Ga0114981_101902855	3300009160	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGTSEDYDTESCDCNPHQLFITKE
Ga0114982_100852410	3300009419	Deep Subsurface	RNWLISGRGYLMGVMKELHLEITTCDLCYGTGWLYFGNSEDFDTESCDCNPHQLFITKENN*
Ga0114982_10751102	3300009419	Deep Subsurface	MGVMKELHLEITTCDLCYGTGWLHFGNETDFDTESCDCNPHQLFITKENN*
Ga0102883_10725774	3300010312	Estuarine	MGKVKDMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFTT
Ga0136551_10017598	3300010388	Pond Fresh Water	MSKMKTLYADIVTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFITKENN*
Ga0137575_100356491	3300010970	Pond Fresh Water	MSKMKTLYADIVTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFIT
Ga0153801_100113111	3300012017	Freshwater	MRVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITNENN*
Ga0157498_10008113	3300012666	Freshwater, Surface Ice	MRVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN*
Ga0207193_102596711	3300020048	Freshwater Lake Sediment	MAKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0211732_12464154	3300020141	Freshwater	MGVMKELHLDITTCDLCYGTGWLHFGNEIDFDTESCDCNPHQLFITKENN
Ga0211736_104181607	3300020151	Freshwater	MGVMKELHLEITTCELCYGTGWLHFGNSLDYDTESCDCNPHQLFITKEND
Ga0211733_112503853	3300020160	Freshwater	MGVMKELHLDIITCDLCYGVGWLYFGNGTDFDTESCDCNPHQLFITKENN
Ga0211729_103996975	3300020172	Freshwater	MGVMKELHLEITTCDLCYGTGWLHFGNSEDYDTESCDCNPHQLFITKENN
Ga0208326_10001029	3300020494	Freshwater	MGTMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0208697_100124111	3300020507	Freshwater	MGTMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0208858_10437513	3300020524	Freshwater	AKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0208232_10040826	3300020527	Freshwater	MAKMKTLYTEITTCDLCYGTGWLYFGNGEDFDTESCDCNPHQLFITKEND
Ga0208224_10057194	3300020528	Freshwater	MGVMKELHLEITTCELCYGTGWLHFGNSLDYDTESCDCNPHQLFITKENN
Ga0207942_10062986	3300020549	Freshwater	MSKMKTLYTEIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0208855_10022052	3300020553	Freshwater	MAKMKTLYTEITTCDLCYGTGWLYFGNGEDFDTESCDCNPHQLFITKENN
Ga0213921_10047482	3300021952	Freshwater	MGKMKELYSEIITCDLCFGTGWLFFGNGIDYDTESCDCNPHQLFITKEND
Ga0222713_100597797	3300021962	Estuarine Water	MAKMKTLMTEIENCEQCYGQGWHFWAQGEDFDTESCDCNPHQLFITKENN
Ga0214917_103933641	3300022752	Freshwater	MKELHLEITTCELCYGTGWLHFGNSEDYDTESCDCNPHQLFITKEND
Ga0214921_1000471633	3300023174	Freshwater	MAKMKTLYTEIANCEQCYGQGWHFWAQGEDFDTESCDCNPHQLFITKENN
Ga0244777_1000102023	3300024343	Estuarine	MGKVKEMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFTTKEAD
Ga0244777_109015862	3300024343	Estuarine	MGVMKELHLEITTCDLCYGTGWLHFGTSEDYDTESCDCNPHQLFITKENN
Ga0244775_100703862	3300024346	Estuarine	MGVMKEFHLEITTCDLCYGTGWLHFGNSEDYDTESCDCNPHQLFITKENN
Ga0244775_100907392	3300024346	Estuarine	MGVMKTLYTEIENCEKCFGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0244775_102336932	3300024346	Estuarine	MGVMKELHLEITTCELCYGTGWLHFGNSEDYDTESCDCNPHQLFITKEND
Ga0244776_1000088949	3300024348	Estuarine	MGVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0244776_106973264	3300024348	Estuarine	ENCEKCFGQGWQFWAQGEDFDTESCECNPHQLFITKENN
Ga0256304_10872911	3300024856	Freshwater	FISGRRYLMGVMKTLYTEIENCEKCFGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0208026_10071376	3300027236	Estuarine	MGVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLF
Ga0208173_10127304	3300027244	Estuarine	MGKVKEMLAEITTCDLCYGSGWLFFGNGIDYDTESCDCNPHQLFTTKESD
Ga0208810_10406685	3300027304	Estuarine	NCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0209552_100030719	3300027563	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGNSEDYDTESCDCNPHQLFITKEND
Ga0209651_100018725	3300027581	Freshwater Lake	MKELHLEITTCDLCYGTGWLHFGNSEDYDTESCDCNPHQLFITKEND
Ga0208133_10934701	3300027631	Estuarine	MGVMKELHLEITTCELCYGTGWLHFGTSEDYDTESCDCNPHQLFITKENN
Ga0209135_10393152	3300027642	Freshwater Lake	MPYSSSKGRKLMGVMKELHLEITTCDLCYGTGWLHFGTSEDYDTESCDCNPHQLFITKEN
Ga0209551_100011837	3300027689	Freshwater Lake	MGVMKELHLEITTCDLCYGTGWLHFGNSLDYDTENCDCNPHQLFITKENY
Ga0209599_1000020036	3300027710	Deep Subsurface	MGVMKELHLEITTCDLCYGTGWLYFGNSEDFDTESCDCNPHQLFITKENN
Ga0209617_100787262	3300027720	Freshwater And Sediment	MGVMKELHLEITTCDLCYGTGWLHFGNSLDYDTENCDCNPHQLFITKEND
Ga0209444_101470324	3300027756	Freshwater Lake	MGVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENY
Ga0209500_1000805411	3300027782	Freshwater Lake	MGVMKELHLDITTCDLCYGVGWLYFGNGIDFDTESCDCNPHQLFITKENN
Ga0209358_101274741	3300027804	Freshwater Lake	EIENCEQCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0209358_105673162	3300027804	Freshwater Lake	MGVMKTLYTEIENCEKCYGQGWQFWAQGEDFDTESCDCNPHQLFITKEN
Ga0247723_100200123	3300028025	Deep Subsurface Sediment	MGVMKELHLEITTCDLCYGTGWLHFGNEIDFDTESCDCNPHQLFITKENN
Ga0247723_100229112	3300028025	Deep Subsurface Sediment	MGVMKELHLDITTCDLCYGTGWLYFGNEIDFDTESCDCNPHQLFITKENN
Ga0315909_1000133046	3300031857	Freshwater	MGVMKTLYTEIENCQMCFGQGWHYWAQGEDFDTESCDCNPHQLFITKEDN
Ga0315903_109943951	3300032116	Freshwater	MGVMKTLYTEIENCENCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN
Ga0334980_0000095_39205_39357	3300033816	Freshwater	MAMMKTLYTEITTCDLCYGTGWLYFGNETDFDTESCDCNPHQLFITKENN
Ga0334994_0031988_2403_2555	3300033993	Freshwater	MGKMKELHLDITTCDLCYGTGWLYFGNETDFDTESCDCNPHQLFITKENN
Ga0335019_0008917_5266_5418	3300034066	Freshwater	MGKMKELQLDITTCDLCYGTGWLYFGNGIDFDTESCDCNPHQLFITKENN
Ga0335012_0050412_945_1097	3300034093	Freshwater	MAIMKTLYTEIENCETCYGQGWHYWIQGEDFDTESCDCNPHQLFINEENN
Ga0335035_0626126_428_565	3300034105	Freshwater	TLYTEIENCETCYGQGWHYWIQGEDFDTESCDCNPHQLFINEENN
Ga0335016_0640419_2_157	3300034166	Freshwater	LMAKMKTLYTEITTCDLCYGTGWLYFGNGEDFDTESCDCNPHQLFITKENN
Ga0335065_0038124_3265_3372	3300034200	Freshwater	QCYGQGWQFWAQGEDFDTESCDCNPHQLFITKENN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099300

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences