NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099289

Metagenome / Metatranscriptome Family F099289

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099289
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 57 residues
Representative Sequence MITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNTEGAMAIVNAIKRY
Number of Associated Samples 79
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 20.39 %
% of genes near scaffold ends (potentially truncated) 16.50 %
% of genes from short scaffolds (< 2000 bps) 65.05 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (86.408 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(13.592 % of family members)
Environment Ontology (ENVO) Unclassified
(66.019 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.262 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.82%    β-sheet: 27.06%    Coil/Unstructured: 54.12%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.55.1.0: automated matchesd3v5wa33v5w0.66625
b.55.1.0: automated matchesd3dxea_3dxe0.66377
b.55.1.5: Third domain of FERMd2al6a22al60.66342
b.55.1.8: GRAM domaind1zsqa11zsq0.65629
b.55.1.1: Pleckstrin-homology domain (PH domain)d1maia_1mai0.6536


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF04542Sigma70_r2 6.80
PF03851UvdE 3.88
PF00196GerE 2.91
PF01467CTP_transf_like 2.91
PF03796DnaB_C 2.91
PF10504DUF2452 2.91
PF13589HATPase_c_3 1.94
PF00011HSP20 1.94
PF01844HNH 0.97
PF00176SNF2-rel_dom 0.97
PF04545Sigma70_r4 0.97
PF04014MazE_antitoxin 0.97
PF08240ADH_N 0.97
PF01531Glyco_transf_11 0.97
PF136402OG-FeII_Oxy_3 0.97
PF08795DUF1796 0.97
PF00436SSB 0.97
PF01590GAF 0.97
PF03567Sulfotransfer_2 0.97
PF05496RuvB_N 0.97
PF04577Glyco_transf_61 0.97
PF16363GDP_Man_Dehyd 0.97
PF13412HTH_24 0.97
PF04851ResIII 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 6.80
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 6.80
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 6.80
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 6.80
COG4294UV DNA damage repair endonucleaseReplication, recombination and repair [L] 3.88
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 2.91
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 2.91
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 1.94
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 0.97
COG2255Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvBReplication, recombination and repair [L] 0.97
COG2965Primosomal replication protein NReplication, recombination and repair [L] 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.09 %
UnclassifiedrootN/A2.91 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10007647All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales5791Open in IMG/M
3300000224|SI34jun09_10mDRAFT_1002305All Organisms → cellular organisms → Bacteria5829Open in IMG/M
3300000224|SI34jun09_10mDRAFT_1002770Not Available5143Open in IMG/M
3300000928|OpTDRAFT_10186692All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium868Open in IMG/M
3300001347|JGI20156J14371_10016063All Organisms → Viruses → Predicted Viral4309Open in IMG/M
3300001349|JGI20160J14292_10003326Not Available12342Open in IMG/M
3300001352|JGI20157J14317_10162343All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium680Open in IMG/M
3300001846|ACM22_1119175All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium628Open in IMG/M
3300001938|GOS2221_1006942All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED422427Open in IMG/M
3300003620|JGI26273J51734_10086870All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300004097|Ga0055584_100045425All Organisms → cellular organisms → Bacteria4330Open in IMG/M
3300004097|Ga0055584_100830002All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium967Open in IMG/M
3300004097|Ga0055584_101906559All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium610Open in IMG/M
3300004461|Ga0066223_1474043All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300005748|Ga0076925_1072211All Organisms → cellular organisms → Bacteria4144Open in IMG/M
3300005941|Ga0070743_10000040All Organisms → cellular organisms → Bacteria40329Open in IMG/M
3300005941|Ga0070743_10006587All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED424147Open in IMG/M
3300006484|Ga0070744_10078213All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300006752|Ga0098048_1000600All Organisms → cellular organisms → Bacteria16995Open in IMG/M
3300006752|Ga0098048_1012291All Organisms → cellular organisms → Bacteria2990Open in IMG/M
3300006867|Ga0075476_10127894All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium961Open in IMG/M
3300006874|Ga0075475_10022482All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3094Open in IMG/M
3300006916|Ga0070750_10051469All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1994Open in IMG/M
3300006916|Ga0070750_10102092All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1328Open in IMG/M
3300007539|Ga0099849_1000007All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium79741Open in IMG/M
3300007539|Ga0099849_1026353All Organisms → Viruses → Predicted Viral2506Open in IMG/M
3300007558|Ga0102822_1018151All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED421709Open in IMG/M
3300009000|Ga0102960_1215702All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium683Open in IMG/M
3300009071|Ga0115566_10016825All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales5418Open in IMG/M
3300009420|Ga0114994_10112626All Organisms → Viruses → Predicted Viral1849Open in IMG/M
3300009420|Ga0114994_10119741All Organisms → cellular organisms → Bacteria1789Open in IMG/M
3300009420|Ga0114994_10199441All Organisms → cellular organisms → Bacteria1347Open in IMG/M
3300009420|Ga0114994_10308300All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED421054Open in IMG/M
3300009438|Ga0115559_1101709All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300009442|Ga0115563_1093745All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300009512|Ga0115003_10013261All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales5662Open in IMG/M
3300009512|Ga0115003_10417509All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300010296|Ga0129348_1139959All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium841Open in IMG/M
3300010296|Ga0129348_1268305All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium572Open in IMG/M
3300010297|Ga0129345_1300752All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium556Open in IMG/M
3300010883|Ga0133547_11742344All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300016724|Ga0182048_1166580All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300017743|Ga0181402_1000472All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales15118Open in IMG/M
3300017744|Ga0181397_1051737All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300017744|Ga0181397_1052284All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.1128Open in IMG/M
3300017752|Ga0181400_1118014All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300017782|Ga0181380_1016070All Organisms → cellular organisms → Bacteria2824Open in IMG/M
3300017782|Ga0181380_1282271All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45546Open in IMG/M
3300017818|Ga0181565_10194599All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1397Open in IMG/M
3300017824|Ga0181552_10545211All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium543Open in IMG/M
3300017949|Ga0181584_10140235All Organisms → Viruses → Predicted Viral1626Open in IMG/M
3300017950|Ga0181607_10663808All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium544Open in IMG/M
3300017952|Ga0181583_10176991All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1411Open in IMG/M
3300017956|Ga0181580_10385131All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium936Open in IMG/M
3300017962|Ga0181581_10619863All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium657Open in IMG/M
3300017967|Ga0181590_10322268All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1117Open in IMG/M
3300018426|Ga0181566_11167676All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium514Open in IMG/M
3300019459|Ga0181562_10359723All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300019765|Ga0194024_1139490All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium566Open in IMG/M
3300020055|Ga0181575_10141517All Organisms → Viruses → Predicted Viral1456Open in IMG/M
3300020166|Ga0206128_1001425All Organisms → cellular organisms → Bacteria23871Open in IMG/M
3300020166|Ga0206128_1109936All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300020185|Ga0206131_10106432All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1592Open in IMG/M
3300020185|Ga0206131_10373086All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium606Open in IMG/M
3300020314|Ga0211522_1027481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales1056Open in IMG/M
3300020336|Ga0211510_1131097All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium562Open in IMG/M
3300020438|Ga0211576_10004402All Organisms → cellular organisms → Bacteria9657Open in IMG/M
3300020439|Ga0211558_10010215All Organisms → cellular organisms → Bacteria → FCB group4880Open in IMG/M
3300020439|Ga0211558_10432638All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium606Open in IMG/M
3300020442|Ga0211559_10193147All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45962Open in IMG/M
3300020810|Ga0181598_1163699All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium885Open in IMG/M
3300021085|Ga0206677_10023247All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3664Open in IMG/M
3300021085|Ga0206677_10082081All Organisms → Viruses → Predicted Viral1568Open in IMG/M
3300021185|Ga0206682_10039340All Organisms → Viruses → Predicted Viral2703Open in IMG/M
3300021305|Ga0210296_1045191All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45524Open in IMG/M
3300021371|Ga0213863_10000223All Organisms → cellular organisms → Bacteria44891Open in IMG/M
3300021957|Ga0222717_10000552All Organisms → cellular organisms → Bacteria32063Open in IMG/M
3300021957|Ga0222717_10661329All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45539Open in IMG/M
3300021958|Ga0222718_10000404All Organisms → cellular organisms → Bacteria45320Open in IMG/M
3300021958|Ga0222718_10020386All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED454623Open in IMG/M
3300022068|Ga0212021_1128849All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium518Open in IMG/M
(restricted) 3300022920|Ga0233426_10011025All Organisms → cellular organisms → Bacteria5627Open in IMG/M
3300023081|Ga0255764_10193359All Organisms → Viruses → Predicted Viral1013Open in IMG/M
(restricted) 3300023109|Ga0233432_10020690All Organisms → cellular organisms → Bacteria4805Open in IMG/M
(restricted) 3300023109|Ga0233432_10073703All Organisms → cellular organisms → Bacteria2025Open in IMG/M
(restricted) 3300024264|Ga0233444_10154920All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED451106Open in IMG/M
3300025083|Ga0208791_1027246All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300025098|Ga0208434_1024124All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300025674|Ga0208162_1000032All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium62828Open in IMG/M
3300025674|Ga0208162_1002891All Organisms → cellular organisms → Bacteria8349Open in IMG/M
3300025674|Ga0208162_1023877All Organisms → Viruses → Predicted Viral2314Open in IMG/M
3300025769|Ga0208767_1220453All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium620Open in IMG/M
3300025869|Ga0209308_10280220All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium703Open in IMG/M
3300025870|Ga0209666_1099328All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300025886|Ga0209632_10528343All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45533Open in IMG/M
3300025890|Ga0209631_10308937All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium762Open in IMG/M
3300027631|Ga0208133_1054865All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300027780|Ga0209502_10073287All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED421807Open in IMG/M
3300027813|Ga0209090_10173169All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300029306|Ga0135212_1016772All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium714Open in IMG/M
3300031519|Ga0307488_10006941All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales9281Open in IMG/M
3300031519|Ga0307488_10688865All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300032047|Ga0315330_10005835Not Available8402Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh13.59%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine12.62%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.68%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine7.77%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.83%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.83%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.85%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.88%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.88%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine3.88%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.88%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.88%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.91%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.94%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.94%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.97%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.97%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.97%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.97%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.97%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.97%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.97%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.97%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.97%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001846Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25bEnvironmentalOpen in IMG/M
3300001938Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005EnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005748Seawater microbial communities from Vineyard Sound, MA, USA - control T7EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007558Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009442Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300016724Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020314Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556135-ERR598974)EnvironmentalOpen in IMG/M
3300020336Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020810Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021305Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R868 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300023081Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027780Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_10007647153300000116MarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNEDGALAIVNAIKRY*
SI34jun09_10mDRAFT_100230523300000224MarineVIIEDANDESYFINPRNVIYVKQREHFWKILLINGEIIMTKNREGAMAIVNKIREYA*
SI34jun09_10mDRAFT_1002770133300000224MarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNTEGAMSIVNAIKRY*
OpTDRAFT_1018669233300000928Freshwater And MarineVIIEDANDESYFINPRNVIYVKQREHFWKILLINGEIIMTKNREGAMAIVKKIREYA*
JGI20156J14371_1001606333300001347Pelagic MarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNGDGAMAIVSAIKRY*
JGI20160J14292_1000332643300001349Pelagic MarineMITIEDANXEKFYINPVNVVYVKQREKFWKILLTTGEAVMTRNVDGAMAIVNAIKRY*
JGI20157J14317_1016234323300001352Pelagic MarineMITIEDANQEKFYINPVNVVYVKQRENFWKILLTTGEAIMTKNADGAMAIVNAIKRY*
ACM22_111917533300001846Marine PlanktonMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTRNEGGAMAIVNAIKRY*
GOS2221_100694243300001938MarineMIQIEDSNNEIYYINPCNVIYVKKRKPYWKILLLNGEIIMTKNKDGAMAIVNKIIN*
JGI26273J51734_1008687033300003620MarineYIFIMITIEDANNETFYINPVNVVYVKQREKFWKILLTTGEVIMTKNTEGAMAIVAAIKRY*
Ga0055584_10004542533300004097Pelagic MarineMITIEDANNESYYINPVNVVYVKRRDNFWKISLSTGEAIMTKNKDGAMAIVNAIKRY*
Ga0055584_10083000233300004097Pelagic MarineMITIEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSEGAMSIINSIKRY*
Ga0055584_10190655923300004097Pelagic MarineMIQIEDANNEVYYINPKNVIYVKKRKPMWKILLVNGEIIMTKNKEGAMAIVHAMLR*
Ga0066223_147404323300004461MarineMIQIEDSNNEIYYINPCNVIYVKKRKPYWKILLINGEIIMTKNKDGAMAIVNKIIN*
Ga0076925_107221123300005748MarineMITIEDANNEQYFINPINVIYVKKRESFWKILLTNGEAIMTKNAEGAMSIVNAIKKYS*
Ga0070743_10000040453300005941EstuarineMITIEDANNESYYINPANVVYVKQREKFWKILLITGEAIMTKNKDGAMAIVNSIKRYS*
Ga0070743_1000658723300005941EstuarineMIQIEDSNNEVYYINPCNVIYVKKRKPYWKILLLNGEIIMTKNKDGAMAIVNKIIN*
Ga0070744_1007821333300006484EstuarineMITIEDANNESYYINPANVVYVKQREKFWKILLITGEVIMTKNKDGAMAIVNSIKRYS*
Ga0098048_100060043300006752MarineMITIEDANNEQYFINPINVIYVKKRESFWKILLTNGEAIMTKNTEGAMSIVNAIKKYS*
Ga0098048_101229143300006752MarineMITIEDANNESYYINPANVVYVKQREKFWKILLITGEAIMTKNKEGAMAIVNSIKRYS*
Ga0075476_1012789413300006867AqueousMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNEDGALAIVNA
Ga0075475_1002248243300006874AqueousMITIEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSDGAMSIVNAIKRY*
Ga0070750_1005146953300006916AqueousMIQIEDANNEVYYINPKNVIYVKKRKPMWKILLVNGEIIMTKNKEGAMSIVTAMLSR*
Ga0070750_1010209223300006916AqueousMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTRNEEGAMSIVNAIKRY*
Ga0099849_1000007653300007539AqueousMGINIEDQNSEHYYINPRNVVYVKQRDKFWKILLVGGEVVITKNSEGAKAIIKAIK*
Ga0099849_102635343300007539AqueousMGISIEDQNAEKYYINPRNVVYVKQRDQFWKILLVGGEVIITKNTEGAQAIIRAIK*
Ga0102822_101815113300007558EstuarineNMIQIEDSNNEVYYINPCNVIYVKKRKPYWKILLLNGEIIMTKNKDGAMAIVNKIIN*
Ga0102960_121570213300009000Pond WaterMIQIEDSNSETYYINPNNVIYVKKRKPYWKILLVNGEIIMTKNKDGAMAIVNKMLSQ*
Ga0115566_1001682573300009071Pelagic MarineMIQIEDSNNEVYYINPCNVIYVKKRKPYWKILLLNGEIIMTKNKDGAMAIANKIIN*
Ga0114994_1011262663300009420MarineMIQIEDSNSETYYINPCNVIYVKKRKPYWKILLVNGEIIMTKNKDGAMAIVNKI
Ga0114994_1011974113300009420MarineKMITIEDSNNEHFYINPINVIYVKRREKFWKILLSNGESIMTKNGEGAMAIVNAIKRY*
Ga0114994_1019944113300009420MarineMINIEDANNEQYFINPINVVYVKQRENFWKILLVNGESIMTRNEQGAMAIVDSIRKYK*
Ga0114994_1030830013300009420MarineMIQIEDSNSETYYINPCNVIYVKKRSVKPYWKILLLNGEIIMTKNKDGAMAIVNKIIN*
Ga0115559_110170933300009438Pelagic MarineMGESKQLLSMIIEDANNEEYFINPRNVIYVKRREKFWKILLSNGEVIMTKNAEGAMAIANKIKQL*
Ga0115563_109374523300009442Pelagic MarineMGESKQLLGMIIEDANNEEYFINPRNVIYVKRREKFWKILLSNGEVIMTKNAEGAMAIANKIKQL*
Ga0115003_10013261113300009512MarineMIQIEDSNSETYYINPCNVIYVKKRKPYWKILLVNGEIIMTKNKDGAMAIVNKIIN*
Ga0115003_1041750913300009512MarineMITIEDSNNEHFYINPINVIYVKRREKFWKILLSNGEAIMTKNGEGAMAIVNAIKRY*
Ga0129348_113995933300010296Freshwater To Marine Saline GradientMITIEDANNEKFYINPVNVVYVKQREKFWKILLITGEAVMTRNEAGAMSIVNAIKRY*
Ga0129348_126830513300010296Freshwater To Marine Saline GradientMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAVMTRNEEGAMSIVNAIKRY*
Ga0129345_130075213300010297Freshwater To Marine Saline GradientMITIEDANNEKFYINPVNVVYVKQREKFWKILLITGEAVMTRNEAGAMSIVNAIKR
Ga0133547_1174234433300010883MarineMITIEDSNNEHFYINPINVIYVKRREKFWKILLSNGESIMTKNGEGAMAIVNAIKRY*
Ga0182048_116658033300016724Salt MarshANKETYYINPINVIYVKQRECFWKILLTNGEGIMTKNSEGAMKIVNAIKRYG
Ga0181402_1000472203300017743SeawaterMIQIEDANNEVYYINPKNVIYVKKRKPMWKILLVNGEIIMTKNKEGAMAIVHAMLR
Ga0181397_105173723300017744SeawaterMITIEDANNESYYINPTNVVYVKRRDNFWKISLSTGEAIMTKNKEGAMAIVNAIKRYS
Ga0181397_105228413300017744SeawaterMIQIEDSNNETYYINPRNVIYVKKRKPLYKILLLNGEIIMTKNKAGAMSIVSAMLK
Ga0181400_111801423300017752SeawaterMITIEDANNESYYINPANVVYVKRREKFWKILLITGEVIMTKNKDGAMAIVNSIKRYS
Ga0181380_101607053300017782SeawaterMGINIEDQNSEHYYINPRNVVYVKQRDNFWKILLVGGEVIITKNTEGAQAIIRAIK
Ga0181380_128227123300017782SeawaterMITVEDANNESYYINPANVVYVKQREKFWKILLITGEVIMTKNKDGAMAIVNSIKRYS
Ga0181565_1019459943300017818Salt MarshMITIEDANNEKFYINPLNVVYVKQRENFWKILLVTGEAIMTKNSEGAMAIVRSIKK
Ga0181552_1054521113300017824Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTNNGDGALAIVNAIKRY
Ga0181584_1014023543300017949Salt MarshMITIEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSDGAMSIVNAIKRY
Ga0181607_1066380823300017950Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTNNRDGALAIVNAI
Ga0181583_1017699153300017952Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNGDGALAIVNAIKRY
Ga0181580_1038513123300017956Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAVMTRNEAGAMSIVNAIKRY
Ga0181581_1061986313300017962Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLVTGEAVMTRNEEGAMSIVNAIKRY
Ga0181590_1032226833300017967Salt MarshEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSDGAMSIINSIKRY
Ga0181566_1116767623300018426Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLITGEAVMTRNEAGAMSIVNAIKRY
Ga0181562_1035972313300019459Salt MarshNKETYYINPINVIYVKQRECFWKILLTNGEGIMTKNSEGAMKIVNAIKRYG
Ga0194024_113949013300019765FreshwaterMITIEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSDGAMSIINSIKRY
Ga0181575_1014151733300020055Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAVMTRNEEGAMSIVNAIKRY
Ga0206128_1001425253300020166SeawaterMIQIEDSNNEVYYINPCNVIYVKKRKPYWKILLLNGEIIMTKNKDGAMAIVNKIIN
Ga0206128_110993643300020166SeawaterMITIEDANNESYYINPVNVVYVKRRDNFWKISLSTGEAIMTKNKDGAMAIVNAIKRY
Ga0206131_1010643223300020185SeawaterMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAVMTRNVDGAMAIVNAIKRY
Ga0206131_1037308623300020185SeawaterMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNGDGAMAIVSAIKRY
Ga0211522_102748123300020314MarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNGDGALAIVDAIKRY
Ga0211510_113109723300020336MarineVIHGKNALENNKIMITIEDANNEKYYINPINVIYVKKREAFWKILLVNGEAIMTKNSEGAMSIINSITKYK
Ga0211576_10004402233300020438MarineMITIEDANNEQYYINPINVVYVKRRDSFWKISLSTGEAIMTKNKDGALAIINAIKK
Ga0211558_1001021563300020439MarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTRNADGAMAIVDAIKRY
Ga0211558_1043263813300020439MarineMITIEDSNNEHYYINPSNVVYVKRRDKFWKILLTTGEAIMTKNQDGAMAIVHAIKKYS
Ga0211559_1019314723300020442MarineMIQIEDANNEVYYINPKNVIYVKKRKPMWKILLLNGEIIMTKNKEGAMSIVDAMLKF
Ga0181598_116369923300020810Salt MarshMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTNNRDGALAIVNAIKRY
Ga0206677_1002324783300021085SeawaterMIQIEDSNSETYYINPTNVIYVKKRKPFYKILLLNGEIIMTKNKAGAMSIVSAMLK
Ga0206677_1008208123300021085SeawaterMITIEDANNESYYINPANVVYVKQREKFWKILLITGEAIMTKNKDGAMAIVNSIKRYS
Ga0206682_1003934063300021185SeawaterMITIEDANNESYYINPTNVVYVKRRDNFWKISLSTGEAIMTKNKEGAMAIVNSIKRYS
Ga0210296_104519123300021305EstuarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNTEGAMSIVNAIKRY
Ga0213863_10000223403300021371SeawaterMITIEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSDGAMAIVNAIKRY
Ga0222717_1000055283300021957Estuarine WaterMITIEDANNEQYFINPINVIYVKRRENFWKILLTNGEAIMTKNTEGAMAIVNAIKKYS
Ga0222717_1066132923300021957Estuarine WaterMITIEDSNNEHFYINPINVIYVKRRDKFWKILLSNGEAIMTKNGEGAMAIVNAIKRY
Ga0222718_100004041023300021958Estuarine WaterMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNTEGAMAIVNAIKRY
Ga0222718_1002038683300021958Estuarine WaterMITIEDANNESYYINPANVVYVKQREKFWKILLITGEAIMTKNKEGAMAIVNSIKRYS
Ga0212021_112884913300022068AqueousMITIEDANQEKFYINPVNVVYVKQRENFWKILLTTGEAIMTKNADG
(restricted) Ga0233426_1001102513300022920SeawaterMIQIEDSNNETYYINPCNVIYVKKRKPYWKILLVNGEIIMTKNKDGAMAIVNKMLNQ
Ga0255764_1019335913300023081Salt MarshMITIEDANNEKFYINPVNVVYVKQRESFWKILLTTGEAIMTKNSDGAMSIVNAIKR
(restricted) Ga0233432_10020690153300023109SeawaterMINIEDANNEQYFINPINVVYVKRRDNFWKILLVTGEAIMTKNKDGALAIINSIKR
(restricted) Ga0233432_1007370323300023109SeawaterMITIEDANNEQYFINPINVIYVKKRESFWKILLTNGEAIMTKNAEGAMSIVNAIKKYS
(restricted) Ga0233444_1015492013300024264SeawaterMITIEDANNETFYINPVNVVYVKQREKFWKILLTTGEVIMTKNTEGAMAIVAAIKRY
Ga0208791_102724613300025083MarineANNEQYFINPINVIYVKKRESFWKILLTNGEAIMTKNAEGAMSIVNAIKKYS
Ga0208434_102412443300025098MarineMITIEDANNEQYFINPINVIYVKKRESFWKILLTNGEAIMTKNTEGAMSIVNAIKKYS
Ga0208162_1000032553300025674AqueousMGINIEDQNSEHYYINPRNVVYVKQRDKFWKILLVGGEVVITKNSEGAKAIIKAIK
Ga0208162_1002891143300025674AqueousMIQIEDANNEVYYINPKNVIYVKKRKPMWKILLVNGEIIMTKNKEGAMSIVTAMLSR
Ga0208162_102387743300025674AqueousMGISIEDQNAEKYYINPRNVVYVKQRDQFWKILLVGGEVIITKNTEGAQAIIRAIK
Ga0208767_122045333300025769AqueousMITIEDANQEKFYINPVNVVYVKQRENFWKILLTTGEAIMTKNADGAMAIVNAIKRY
Ga0209308_1028022023300025869Pelagic MarineMIQIEDSNNEVYYINPCNVIYVKKRKPYWKILLLNGEIIMTKNKDGAMAIANKIIN
Ga0209666_109932813300025870MarineYIFIMITIEDANNETFYINPVNVVYVKQREKFWKILLTTGEVIMTKNTEGAMAIVAAIKR
Ga0209632_1052834323300025886Pelagic MarineMIQIEDSNNEIYYINPCNVIYVKKRKPYWKILLINGEIIMTKNKDGAMAIVNKIIN
Ga0209631_1030893713300025890Pelagic MarineMITIEDANNEKFYINPVNVVYVKQREKFWKILLTTGEAIMTKNGDGAMAIVSAIKR
Ga0208133_105486513300027631EstuarineMITIEDANNESYYINPANVVYVKQREKFWKILLITGEVIMTKNKDGAMAIVNSIKRYS
Ga0209502_1007328763300027780MarineMIQIEDSNSETYYINPCNVIYVKKRKPYWKILLVNGEIIMTKNKDGAMAIVNKIIN
Ga0209090_1017316933300027813MarineMITIEDSNNEHFYINPINVIYVKRREKFWKILLSNGESIMTKNGEGAMAIVNAIKRY
Ga0135212_101677213300029306Marine HarborMGINIEDQNSEHYYINPRNVVYVKQRDNFWKILLVGGEVIITKNSEGAQAIIRAIR
Ga0307488_10006941223300031519Sackhole BrineEDSNSETYYINPCNVIYVKKRKPYWKILLVNGEIIMTKNKDGAMAIVNKIIN
Ga0307488_1068886523300031519Sackhole BrineMITIEDSNNEHFYINPINVIYVKRREKFWKILLSNGEAIMTKNGEGAMAIVNAIKRY
Ga0315330_10005835143300032047SeawaterMGITIEDANNEKYYINPRNVVYVKKRENFWKILLIGGEVIMTKNDTGAKAIIEKFNGKI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.