Metagenome / Metatranscriptome Family F099251

Basic Information
Family ID	F099251
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	44 residues
Representative Sequence	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMP
Number of Associated Samples	94
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.12 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (62.136 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.010 % of family members)
Environment Ontology (ENVO)	Unclassified (31.068 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.660 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 0.00% Coil/Unstructured: 75.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF12146	Hydrolase_4	31.07
PF01339	CheB_methylest	5.83
PF01553	Acyltransferase	4.85
PF12697	Abhydrolase_6	1.94
PF03705	CheR_N	1.94
PF02673	BacA	0.97
PF00365	PFK	0.97
PF01739	CheR	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	11.65
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	5.83
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.97
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.97
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.14 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.14 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.14 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.17 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.17 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.37 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	49.51 %
Unclassified	root	N/A	37.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	33.01 %
Streptosporangiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	33.01 %
Allonocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	33.01 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02HTI5E	Not Available	537	Open in IMG/M
3300001593\|JGI12635J15846_10322689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300001647\|JGI20277J16323_100131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1323	Open in IMG/M
3300005439\|Ga0070711_100429191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1078	Open in IMG/M
3300005537\|Ga0070730_10861312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	569	Open in IMG/M
3300005921\|Ga0070766_10069267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2027	Open in IMG/M
3300006577\|Ga0074050_11192033	Not Available	740	Open in IMG/M
3300006605\|Ga0074057_12336946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300009545\|Ga0105237_12719896	Not Available	506	Open in IMG/M
3300010048\|Ga0126373_12625176	Not Available	562	Open in IMG/M
3300011120\|Ga0150983_16559410	Not Available	518	Open in IMG/M
3300012198\|Ga0137364_10335623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300012208\|Ga0137376_11383368	Not Available	594	Open in IMG/M
3300014169\|Ga0181531_10249051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1083	Open in IMG/M
3300014838\|Ga0182030_10221891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2214	Open in IMG/M
3300016294\|Ga0182041_11676503	Not Available	588	Open in IMG/M
3300017821\|Ga0187812_1188328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	660	Open in IMG/M
3300017928\|Ga0187806_1067798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1105	Open in IMG/M
3300017928\|Ga0187806_1123050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	841	Open in IMG/M
3300017928\|Ga0187806_1158053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	751	Open in IMG/M
3300017955\|Ga0187817_10134780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1567	Open in IMG/M
3300017955\|Ga0187817_10305695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1014	Open in IMG/M
3300017959\|Ga0187779_10237894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1150	Open in IMG/M
3300017973\|Ga0187780_10516594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	854	Open in IMG/M
3300018009\|Ga0187884_10227687	Not Available	763	Open in IMG/M
3300018038\|Ga0187855_10514807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	697	Open in IMG/M
3300018058\|Ga0187766_10140241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1494	Open in IMG/M
3300018085\|Ga0187772_11418035	Not Available	516	Open in IMG/M
3300018086\|Ga0187769_10321336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1158	Open in IMG/M
3300018088\|Ga0187771_10646656	Not Available	897	Open in IMG/M
3300018090\|Ga0187770_10634934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	850	Open in IMG/M
3300019268\|Ga0181514_1048404	Not Available	563	Open in IMG/M
3300021178\|Ga0210408_10176501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	1696	Open in IMG/M
3300021388\|Ga0213875_10467527	Not Available	604	Open in IMG/M
3300021405\|Ga0210387_10469248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1118	Open in IMG/M
3300021405\|Ga0210387_11514507	Not Available	573	Open in IMG/M
3300021407\|Ga0210383_11027826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	698	Open in IMG/M
3300021479\|Ga0210410_10280048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1496	Open in IMG/M
3300022525\|Ga0242656_1128219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	519	Open in IMG/M
3300022709\|Ga0222756_1086284	Not Available	520	Open in IMG/M
3300024290\|Ga0247667_1006762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2397	Open in IMG/M
3300025634\|Ga0208589_1113410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300025898\|Ga0207692_10472891	Not Available	792	Open in IMG/M
3300025903\|Ga0207680_11282171	Not Available	521	Open in IMG/M
3300026998\|Ga0208369_1005905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1074	Open in IMG/M
3300027080\|Ga0208237_1032279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	790	Open in IMG/M
3300027297\|Ga0208241_1015829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1097	Open in IMG/M
3300027855\|Ga0209693_10313648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	764	Open in IMG/M
3300027857\|Ga0209166_10573542	Not Available	575	Open in IMG/M
3300027869\|Ga0209579_10115505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1425	Open in IMG/M
3300027884\|Ga0209275_10878474	Not Available	517	Open in IMG/M
3300027889\|Ga0209380_10356079	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300028381\|Ga0268264_11346460	Not Available	724	Open in IMG/M
3300028747\|Ga0302219_10272824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	657	Open in IMG/M
3300028791\|Ga0307290_10288575	Not Available	601	Open in IMG/M
3300030057\|Ga0302176_10374771	Not Available	573	Open in IMG/M
3300030399\|Ga0311353_10800478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	804	Open in IMG/M
3300030503\|Ga0311370_10336070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1933	Open in IMG/M
3300030520\|Ga0311372_10687609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1432	Open in IMG/M
3300031234\|Ga0302325_12777824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	574	Open in IMG/M
3300031544\|Ga0318534_10072612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	1949	Open in IMG/M
3300031549\|Ga0318571_10375594	Not Available	550	Open in IMG/M
3300031572\|Ga0318515_10106854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1471	Open in IMG/M
3300031572\|Ga0318515_10425902	Not Available	710	Open in IMG/M
3300031573\|Ga0310915_11121854	Not Available	546	Open in IMG/M
3300031679\|Ga0318561_10189950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1112	Open in IMG/M
3300031681\|Ga0318572_10034912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2638	Open in IMG/M
3300031682\|Ga0318560_10630199	Not Available	580	Open in IMG/M
3300031708\|Ga0310686_116726981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1251	Open in IMG/M
3300031736\|Ga0318501_10332208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	815	Open in IMG/M
3300031747\|Ga0318502_10093449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1658	Open in IMG/M
3300031751\|Ga0318494_10613122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	636	Open in IMG/M
3300031764\|Ga0318535_10159902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1005	Open in IMG/M
3300031764\|Ga0318535_10511901	Not Available	533	Open in IMG/M
3300031765\|Ga0318554_10364239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	821	Open in IMG/M
3300031765\|Ga0318554_10712096	Not Available	563	Open in IMG/M
3300031796\|Ga0318576_10115495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1235	Open in IMG/M
3300031805\|Ga0318497_10508361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	675	Open in IMG/M
3300031821\|Ga0318567_10324127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300031859\|Ga0318527_10373789	Not Available	607	Open in IMG/M
3300031860\|Ga0318495_10211861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	871	Open in IMG/M
3300031880\|Ga0318544_10267157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	663	Open in IMG/M
3300031910\|Ga0306923_11432866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M
3300031945\|Ga0310913_10918380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	615	Open in IMG/M
3300031954\|Ga0306926_12678294	Not Available	542	Open in IMG/M
3300031955\|Ga0316035_113514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	631	Open in IMG/M
3300032044\|Ga0318558_10331544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	754	Open in IMG/M
3300032065\|Ga0318513_10130386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1191	Open in IMG/M
3300032074\|Ga0308173_10766080	Not Available	886	Open in IMG/M
3300032076\|Ga0306924_11713721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	658	Open in IMG/M
3300032076\|Ga0306924_12550289	Not Available	511	Open in IMG/M
3300032090\|Ga0318518_10343194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	766	Open in IMG/M
3300032205\|Ga0307472_101777634	Not Available	611	Open in IMG/M
3300032261\|Ga0306920_102211877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	764	Open in IMG/M
3300032515\|Ga0348332_12688863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	722	Open in IMG/M
3300032770\|Ga0335085_11575554	Not Available	681	Open in IMG/M
3300032770\|Ga0335085_11764115	Not Available	635	Open in IMG/M
3300032805\|Ga0335078_12207701	Not Available	580	Open in IMG/M
3300032898\|Ga0335072_10678573	Not Available	1014	Open in IMG/M
3300032954\|Ga0335083_10831981	Not Available	738	Open in IMG/M
3300033289\|Ga0310914_10460707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1151	Open in IMG/M
3300034124\|Ga0370483_0102729	Not Available	941	Open in IMG/M
3300034820\|Ga0373959_0027657	Not Available	1128	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.15%
Host-Associated	Host-Associated	4.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.44%
Aquatic	Environmental → Aquatic	9.71%
Plants	Host-Associated → Plants	4.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.64%
Freshwater	Environmental → Aquatic → Freshwater	9.71%
Peat	Environmental → Terrestrial → Peat	5.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.91%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.59%
Loam	Environmental → Terrestrial → Soil → Loam	11.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.01%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001647	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031955	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_11915270	2170459005	Grass Soil	VPDWDNTESRESDEDAAWRDLVARFEEPTTTAGPV
JGI12635J15846_103226891	3300001593	Forest Soil	VPDWDNTESRESDEDAAWRDLVARFAAPLTEQQPVPWPAREDMP
JGI20277J16323_1001311	3300001647	Forest Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVP
Ga0070711_1004291912	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPDWDNTESRESDEDATWRDLVARFETPTTTVGPVPWPDRENV
Ga0070730_108613122	3300005537	Surface Soil	VPDWDNTESRERDEDAVWRDLVARYDAPLTAQEPVPWPDREEVA
Ga0070766_100692671	3300005921	Soil	VPDWDNTDSRERDEDAAWRDLVARFDAPPITQQPVPWPERED
Ga0074050_111920331	3300006577	Soil	VPDWDNTESRESDEDATWRDLVARFETPTTTAGPVPW
Ga0074057_123369461	3300006605	Soil	VPDWDNTESRESDEDATWRDLVARFETPTTTAGPVPWPDRENVP
Ga0105237_127198961	3300009545	Corn Rhizosphere	VPDWDNTESRESDEDATWRDLVARFETPTTTVGPV
Ga0126373_126251762	3300010048	Tropical Forest Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWP
Ga0150983_165594101	3300011120	Forest Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDMLAE
Ga0137364_103356233	3300012198	Vadose Zone Soil	VPDWDNTESRESDEDAAWRDLVARFETPTTTAGPVPWP
Ga0137376_113833682	3300012208	Vadose Zone Soil	VPDWDNTESRESDEDATWRDLVARFETPTTTAGPVPWPDREDVP
Ga0181531_102490511	3300014169	Bog	VPDWDNTESRDRDEDAAWRDLIARFDAPPVTSQPVPWPAREDV
Ga0182030_102218914	3300014838	Bog	VPDWDNTESRERDEDAVWRDLVARFDAPPITQQPVPWPEREDVLPP
Ga0182041_116765031	3300016294	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPTREDMPAEPAREPDGA
Ga0187812_11883281	3300017821	Freshwater Sediment	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPA
Ga0187806_10677981	3300017928	Freshwater Sediment	VPDWDNTDSRERDEDAAWRDLVARFDAPLAAQQPVPWPAREDM
Ga0187806_11230501	3300017928	Freshwater Sediment	LPDWDNTDSRERDEDAAWRDLVARFDAPLAAQQPVPWPAREDM
Ga0187806_11580532	3300017928	Freshwater Sediment	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPV
Ga0187817_101347801	3300017955	Freshwater Sediment	VPDWDNTESREPDEDAAWRDLVARFDAPLTAQQPVPWPAREDMAPESTRETD
Ga0187817_103056951	3300017955	Freshwater Sediment	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMAPESTRETD
Ga0187779_102378942	3300017959	Tropical Peatland	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPW
Ga0187780_105165942	3300017973	Tropical Peatland	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPACEDMAP
Ga0187884_102276871	3300018009	Peatland	VPDWDNTDSRERDEDAAWRDLVARFDAPPITQQPVPWPEREDVLPPRPPE
Ga0187855_105148072	3300018038	Peatland	VPDWDNTESRERDEDAAWRDLIARFDAPPITQQPVPW
Ga0187766_101402413	3300018058	Tropical Peatland	VPDWDNTESRESDEDAAWRDLVARFEEPVTTTEPVPWPERENVPDPRPQARTDRIQRSDGTR
Ga0187772_114180351	3300018085	Tropical Peatland	VPDWDNTESRESDEDAAWRDLVARFEEPATTTEPVPWPERENIPGQRPP
Ga0187769_103213361	3300018086	Tropical Peatland	VADRDNTDSGESGEDAAWRDLVARYDAPLTAEEPVPWPEREGDAAAGASG
Ga0187771_106466561	3300018088	Tropical Peatland	VPDWDDTERERDEDAAWRDLVARFDAPLTAQEPIPWPA
Ga0187770_106349342	3300018090	Tropical Peatland	VADRDNTDSGESGEDAAWRDLVARYDAPLTAEEPVPWPEREGDAVTGASGV
Ga0181514_10484041	3300019268	Peatland	VPDWDNTESRESDEDAAWRDLVARFAAPLTEQQPVPWPAREDMPAEPALEADG
Ga0210408_101765011	3300021178	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDK
Ga0213875_104675272	3300021388	Plant Roots	MPDWDNAERRESDEDAAWRDLIARFDEPAPAAEPAPWPEREDV
Ga0210387_104692481	3300021405	Soil	VPDWDNTESRESDEDAAWRDLVARFETPTTAAEPTP
Ga0210387_115145072	3300021405	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDMAAE
Ga0210383_110278262	3300021407	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAR
Ga0210410_102800483	3300021479	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDVPAEPAP
Ga0242656_11282191	3300022525	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAR
Ga0222756_10862842	3300022709	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDML
Ga0247667_10067624	3300024290	Soil	VPDWDNTESRESDEDATWRDLVARFETPTTTVGPVPWPD
Ga0208589_11134101	3300025634	Arctic Peat Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDMLA
Ga0207692_104728911	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VPDWDNTESRESDEDAAWRDLVARLEEPAAATGPVP
Ga0207680_112821712	3300025903	Switchgrass Rhizosphere	VPDWDNTESRESDEDATWRDLVARFETPTTTVGPVP
Ga0208369_10059052	3300026998	Forest Soil	VPDWDNTESRESDEDAAWRDLVARFEESTATTGPAPWPE
Ga0208237_10322791	3300027080	Forest Soil	VPDWDNTESRESDEDAAWRDLVARFDAPLTGQEPVPWPAREDVLT
Ga0208241_10158293	3300027297	Forest Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDMLAPPAP
Ga0209693_103136481	3300027855	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLIEQQPVPWPAR
Ga0209166_105735421	3300027857	Surface Soil	VPDWDNTESRERDEDAVWRDLVARYDAPLTAQEPVPWPDREEVAGG
Ga0209579_101155051	3300027869	Surface Soil	VPDWDNTESRERDEDAAWRDLVARYDAPLTAQEPVPWPDRED
Ga0209275_108784742	3300027884	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDVPAEPAPEA
Ga0209380_103560791	3300027889	Soil	VPDWDNTDSRERDEDAAWRDLVARFDAPPITQQPVPWPEREDVL
Ga0268264_113464602	3300028381	Switchgrass Rhizosphere	VPDWDNTESRESDEDATWRDLVARFETPTTTAGPVPWPDRENVPR
Ga0302219_102728241	3300028747	Palsa	VPDWDNTESRESDEDAAWRDLVARFAAPLTEQQPVPWPAR
Ga0307290_102885752	3300028791	Soil	VPDWDNTESRESDEDATWRDLVARFETPTTTAGPVPWPDR
Ga0302176_103747712	3300030057	Palsa	VPDWDNTDSRERDEDAAWRDLVARFDAPPITQQPVPWPEREDLLP
Ga0311353_108004782	3300030399	Palsa	VPDWDNTDSRERDEDAAWRDLVARFDAPPITQQPVPWPEREDVLP
Ga0311370_103360701	3300030503	Palsa	VPDWDSTESRERDEDAAWRDLIARFDAPPITQQPVPWPER
Ga0311372_106876091	3300030520	Palsa	VPDWDNTESRERDEDAAWRDLIARFDAPPNTQQPV
Ga0302325_127778242	3300031234	Palsa	VPDWDNTESRESDEDAAWRDLVARFAAPLTGQQPVPWP
Ga0318534_100726123	3300031544	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTGQQPVPWPAREDMPAEPDG
Ga0318571_103755941	3300031549	Soil	VADWDNTESGERDEDAAWRDLVARFDAPLTAQQPVPWPARE
Ga0318515_101068541	3300031572	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPPEPDGADAVRE
Ga0318515_104259022	3300031572	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPTATAGPVPWP
Ga0310915_111218542	3300031573	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPT
Ga0318561_101899501	3300031679	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPPEPDGADAVRES
Ga0318572_100349121	3300031681	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPQTAQQPVPWPAREDMPPEPDGAD
Ga0318560_106301991	3300031682	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMP
Ga0310686_1167269813	3300031708	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTEQQPVPWPAREDMAAEPAPEADGA
Ga0318501_103322081	3300031736	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPTREDMPAEPAR
Ga0318502_100934491	3300031747	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPTATAGPVPWPDREDM
Ga0318494_106131221	3300031751	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDTSPPPTRE
Ga0318535_101599022	3300031764	Soil	VADWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPAREPDDTG
Ga0318535_105119012	3300031764	Soil	VPDWDNTESRESDEDAAWRDLVARFEEATTTAGPVPW
Ga0318554_103642392	3300031765	Soil	VADWDNTESGERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPAREPD
Ga0318554_107120961	3300031765	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMSPPPTRETDG
Ga0318576_101154951	3300031796	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPPEPDGADGV
Ga0318497_105083611	3300031805	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMSPPLTRET
Ga0318567_103241273	3300031821	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPATTAGPVP
Ga0318527_103737892	3300031859	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMASEPALE
Ga0318495_102118611	3300031860	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPQTAQQPVPWPAREDMPPEPDCA
Ga0318544_102671572	3300031880	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMSPEPARETD
Ga0306923_114328661	3300031910	Soil	VADWDNTESGERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPAREP
Ga0310913_109183801	3300031945	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPPREDM
Ga0306926_126782941	3300031954	Soil	VADWDNTESRERDEDAAWRDLVARFDAPLTARQPVPWPAREDMPAREPDD
Ga0316035_1135141	3300031955	Soil	VPDWDSTERSDSDEDAAWRDLIARFDSPVTAQEPVPWPEREDTSNAD
Ga0318558_103315442	3300032044	Soil	LIRSGGDVPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVP
Ga0318513_101303863	3300032065	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPQTAQQPVP
Ga0308173_107660802	3300032074	Soil	VPDWDNTESRESDEDAAWRELVARFEEPMATTEPVPWPERENVPGPQLPR
Ga0306924_117137211	3300032076	Soil	VADWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPAREDMPA
Ga0306924_125502892	3300032076	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPTTTAGPVP
Ga0318518_103431941	3300032090	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPLTAQQPVPWPPREDMPPEPD
Ga0307472_1017776342	3300032205	Hardwood Forest Soil	VPDWDNTESRESDEDAAWRDLVARFETPTTAAEPTPWPEREDVPRPR
Ga0306920_1022118771	3300032261	Soil	VPDWDNTESRERDEDAAWRDLVARFDAPQTAQQPVPWPAREDMPPEPDC
Ga0348332_126888632	3300032515	Plant Litter	VADRDNTDSGKSDEDTVWRDLVARYDVPLTAEEPAPWPEREGDPALGGAGISGVEVGR
Ga0335085_115755542	3300032770	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPVTTTEPAPWPERENVPG
Ga0335085_117641151	3300032770	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPATTTEPVPWPERE
Ga0335078_122077012	3300032805	Soil	VPDWDNTDSRERDEDAAWRDLVARFDAPLAAQQPVPWPAREDMP
Ga0335072_106785731	3300032898	Soil	VPDWDNTESRESDEDAAWRDLVARFEEPTTTARPVPWPDREDV
Ga0335083_108319812	3300032954	Soil	VPDWDNTESRESDEDAAWRDLVARFEESATTAGPVPWPDREDVPRPYPVRGPD
Ga0310914_104607071	3300033289	Soil	VADWDNTESGERDEDAAWRDLVARFDAPLTAQQPVPWPAREDM
Ga0370483_0102729_3_137	3300034124	Untreated Peat Soil	MPDRDNTESRERDEDAAWRDLVARFDAPPITQQPVPWPEREDVLP
Ga0373959_0027657_1004_1126	3300034820	Rhizosphere Soil	MPDWDNTESRESDEDATWRDLVARFETPTTTVGPVPWPDRE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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