Metagenome / Metatranscriptome Family F099247

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	124 residues
Representative Sequence	GKARIVAAERRVAGVVGEGVARIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTLRRINLPAAKLSLKIASRVDDLASALSARAKGTVAQPVAKPAVKKARVAKRVRRTA
Number of Associated Samples	92
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.12 %
% of genes near scaffold ends (potentially truncated)	87.38 %
% of genes from short scaffolds (< 2000 bps)	87.38 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.485 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.621 % of family members)
Environment Ontology (ENVO)	Unclassified (51.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.165 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.36% β-sheet: 0.00% Coil/Unstructured: 32.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00232	Glyco_hydro_1	4.85
PF13468	Glyoxalase_3	4.85
PF00211	Guanylate_cyc	3.88
PF00528	BPD_transp_1	3.88
PF02554	CstA	2.91
PF01650	Peptidase_C13	1.94
PF00866	Ring_hydroxyl_B	0.97
PF03576	Peptidase_S58	0.97
PF02518	HATPase_c	0.97
PF13722	CstA_5TM	0.97
PF00378	ECH_1	0.97
PF13378	MR_MLE_C	0.97
PF14559	TPR_19	0.97
PF00743	FMO-like	0.97
PF04116	FA_hydroxylase	0.97
PF06441	EHN	0.97
PF00672	HAMP	0.97
PF01522	Polysacc_deac_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	4.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.88
COG1966	Carbon starvation protein CstA (peptide/pyruvate transporter)	Energy production and conversion [C]	2.91
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.94
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.97
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.97
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.97
COG5517	3-phenylpropionate/cinnamic acid dioxygenase, small subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
All Organisms	root	All Organisms	49.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
cellular organisms	root	All Organisms → cellular organisms	49.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	17.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	15.53 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.94 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	9.71 %
Alphaproteobacteria bacterium PA3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	5.83 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.94 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	6.80 %
Alphaproteobacteria bacterium PA3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	5.83 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	1.94 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.97 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.97 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Alphaproteobacteria bacterium PA3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	5.83 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	4.85 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	1.94 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.97 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.97 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.97 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Alphaproteobacteria bacterium PA3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	5.83 %
Variovorax sp. URHB0020	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	4.85 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	1.94 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.97 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.97 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.97 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.49 %
Alphaproteobacteria bacterium PA3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	5.83 %
Variovorax sp. URHB0020	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	4.85 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	1.94 %
Nocardioides sp. URHA0020	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0020	0.97 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.97 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.97 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101683363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0020	2242	Open in IMG/M
3300000955\|JGI1027J12803_103635126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1257	Open in IMG/M
3300004114\|Ga0062593_103281790	Not Available	519	Open in IMG/M
3300004633\|Ga0066395_10768848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	576	Open in IMG/M
3300005288\|Ga0065714_10413333	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300005327\|Ga0070658_11965808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	505	Open in IMG/M
3300005329\|Ga0070683_101975097	Not Available	560	Open in IMG/M
3300005330\|Ga0070690_100407111	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005333\|Ga0070677_10532749	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300005344\|Ga0070661_101324670	Not Available	604	Open in IMG/M
3300005347\|Ga0070668_100972599	Not Available	762	Open in IMG/M
3300005355\|Ga0070671_100175981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1811	Open in IMG/M
3300005356\|Ga0070674_101298744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	649	Open in IMG/M
3300005366\|Ga0070659_101161479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	682	Open in IMG/M
3300005456\|Ga0070678_102318255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	509	Open in IMG/M
3300005459\|Ga0068867_100651348	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005544\|Ga0070686_101425194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	582	Open in IMG/M
3300005564\|Ga0070664_100046180	All Organisms → cellular organisms → Bacteria	3679	Open in IMG/M
3300005578\|Ga0068854_100725641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	860	Open in IMG/M
3300005718\|Ga0068866_11218260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	544	Open in IMG/M
3300005719\|Ga0068861_102681322	Not Available	503	Open in IMG/M
3300005840\|Ga0068870_10887407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	629	Open in IMG/M
3300005841\|Ga0068863_101381159	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300006046\|Ga0066652_100383916	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300006579\|Ga0074054_11182834	Not Available	659	Open in IMG/M
3300006806\|Ga0079220_11792680	Not Available	540	Open in IMG/M
3300006953\|Ga0074063_13959132	Not Available	673	Open in IMG/M
3300009093\|Ga0105240_11454488	Not Available	719	Open in IMG/M
3300009094\|Ga0111539_12732411	Not Available	572	Open in IMG/M
3300009551\|Ga0105238_10027105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5840	Open in IMG/M
3300010036\|Ga0126305_10840084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	625	Open in IMG/M
3300010375\|Ga0105239_12264443	Not Available	632	Open in IMG/M
3300010398\|Ga0126383_12226983	Not Available	634	Open in IMG/M
3300010858\|Ga0126345_1197087	Not Available	582	Open in IMG/M
3300010865\|Ga0126346_1160750	Not Available	769	Open in IMG/M
3300012212\|Ga0150985_101248633	Not Available	563	Open in IMG/M
3300012212\|Ga0150985_116586436	Not Available	1146	Open in IMG/M
3300012489\|Ga0157349_1043463	Not Available	513	Open in IMG/M
3300012501\|Ga0157351_1014727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	765	Open in IMG/M
3300012502\|Ga0157347_1076898	Not Available	502	Open in IMG/M
3300012511\|Ga0157332_1058441	Not Available	572	Open in IMG/M
3300012958\|Ga0164299_10595311	Not Available	755	Open in IMG/M
3300012985\|Ga0164308_12164277	Not Available	518	Open in IMG/M
3300013307\|Ga0157372_12740446	Not Available	565	Open in IMG/M
3300013308\|Ga0157375_12358803	Not Available	635	Open in IMG/M
3300014969\|Ga0157376_11164056	Not Available	798	Open in IMG/M
3300014969\|Ga0157376_11531381	Not Available	700	Open in IMG/M
3300014969\|Ga0157376_12592606	Not Available	547	Open in IMG/M
3300015200\|Ga0173480_10426607	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300015371\|Ga0132258_10494195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3058	Open in IMG/M
3300015371\|Ga0132258_10703173	All Organisms → cellular organisms → Bacteria → Proteobacteria	2544	Open in IMG/M
3300015372\|Ga0132256_103006156	Not Available	567	Open in IMG/M
3300015373\|Ga0132257_100085324	All Organisms → cellular organisms → Bacteria → Proteobacteria	3603	Open in IMG/M
3300018476\|Ga0190274_10214423	Not Available	1708	Open in IMG/M
3300018476\|Ga0190274_12092293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	663	Open in IMG/M
3300018481\|Ga0190271_10536889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1284	Open in IMG/M
3300025427\|Ga0208077_1009296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1412	Open in IMG/M
3300025893\|Ga0207682_10247886	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300025903\|Ga0207680_10281782	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300025919\|Ga0207657_10443084	Not Available	1019	Open in IMG/M
3300025924\|Ga0207694_10729460	Not Available	836	Open in IMG/M
3300025930\|Ga0207701_11394046	Not Available	571	Open in IMG/M
3300025931\|Ga0207644_11043254	Not Available	687	Open in IMG/M
3300025932\|Ga0207690_10220872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1450	Open in IMG/M
3300025932\|Ga0207690_10695275	Not Available	836	Open in IMG/M
3300025935\|Ga0207709_10197741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300025938\|Ga0207704_10102497	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300025941\|Ga0207711_10158472	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300025944\|Ga0207661_10884770	Not Available	822	Open in IMG/M
3300025960\|Ga0207651_10686521	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300025972\|Ga0207668_10685571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	899	Open in IMG/M
3300025972\|Ga0207668_11154461	Not Available	695	Open in IMG/M
3300026023\|Ga0207677_10551453	Not Available	1005	Open in IMG/M
3300026041\|Ga0207639_11003036	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300026041\|Ga0207639_11982313	Not Available	543	Open in IMG/M
3300026078\|Ga0207702_10370297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	1375	Open in IMG/M
3300026142\|Ga0207698_10879223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	902	Open in IMG/M
3300026142\|Ga0207698_10892484	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300027874\|Ga0209465_10349295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	741	Open in IMG/M
3300028597\|Ga0247820_10504980	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300030981\|Ga0102770_10716611	Not Available	522	Open in IMG/M
3300031226\|Ga0307497_10219718	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300031562\|Ga0310886_11154507	Not Available	502	Open in IMG/M
3300031740\|Ga0307468_101843792	Not Available	574	Open in IMG/M
3300031765\|Ga0318554_10532277	Not Available	664	Open in IMG/M
3300031770\|Ga0318521_10921831	Not Available	534	Open in IMG/M
3300031821\|Ga0318567_10863059	Not Available	513	Open in IMG/M
3300031854\|Ga0310904_10577534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	764	Open in IMG/M
3300031890\|Ga0306925_11486913	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300031939\|Ga0308174_10610627	Not Available	903	Open in IMG/M
3300031996\|Ga0308176_10739258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	1023	Open in IMG/M
3300032003\|Ga0310897_10604432	Not Available	542	Open in IMG/M
3300032012\|Ga0310902_10272871	Not Available	1029	Open in IMG/M
3300032074\|Ga0308173_11791734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	578	Open in IMG/M
3300033412\|Ga0310810_10268698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	1860	Open in IMG/M
3300033412\|Ga0310810_11170511	Not Available	628	Open in IMG/M
3300033475\|Ga0310811_10107745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3596	Open in IMG/M
3300033550\|Ga0247829_10496710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA3	1010	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.49%
Host-Associated	Host-Associated	49.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.49%
Plants	Host-Associated → Plants	49.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.42%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.65%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_05160790	2170459010	Grass Soil	WRASPKATTVASSSVSGQALKGLEAFAQRTDWAKDMFVVETVRRINLPAAKLSLKIAGRIEDAAGALSARAEGTVERPVAKRAVKKPTAKRVRRAV
INPhiseqgaiiFebDRAFT_1016833633	3300000364	Soil	AAVGEGVARIAEGYDRGIEVVAGRAVKGLEAIAERTEWTKNMFVVETARRINLPAAKLSLXIASRIDDAASSLNARAEGAFAQPVAKTAKRIAKRVGRASKRVRRAA*
JGI1027J12803_1036351262	3300000955	Soil	ERRVAAAVGEGVARIAEGYDRGIEVVAGRAVKGLEAIAERTEWTKNMFVVETARRINLPAAKLSLEIASRIDDAASSLNARAEGAFAQPVAKTAKRIAKRVGRASK
Ga0062593_1032817901	3300004114	Soil	LAAGGSRYAKLVERTQLPVVGGESKARIVAAERRVAEVVGEGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLASALSARAEGTVAQAAAKPAMKKARVAKRVRRTA*
Ga0066395_107688482	3300004633	Tropical Forest Soil	AGYDRGIELVSGQVLKGLEAFAERTEWTKDMFVVETARRFQMPAAKLSLEIASRIDDASSSLNARVEAEQPVVKAVKSVARRRAGAKRVRRAA*
Ga0065714_104133331	3300005288	Miscanthus Rhizosphere	SRYAKLVERTQLPVVGGESKARIVAAERRVAEVVGEGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLATALSARAEGTIAKPAAKKARVAKRARRTA*
Ga0070658_119658081	3300005327	Corn Rhizosphere	GEGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAQLSLKIASRIDNAASALNVRAKGTVKRVVKPAVKKARSVKRVRRAA*
Ga0070683_1019750971	3300005329	Corn Rhizosphere	LVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA*
Ga0070690_1004071112	3300005330	Switchgrass Rhizosphere	KLVDRLPLVADDNKARLVAAERRVAATVGEGVTRIADGYDRGIEFVSGKVVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATGTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA*
Ga0070677_105327492	3300005333	Miscanthus Rhizosphere	RVAGVVDQGVTRTAQGYDRAIEAVSAQVLKGIEAFAERTDWTKDMFVVGALRRVNMPAAQLSLKIASRIDEAAGSLSARADGTTVAKAAAKKKTLRRVRRAA*
Ga0070661_1013246702	3300005344	Corn Rhizosphere	GEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAVEPAVKKPVAKRVRRATKRARRAA*
Ga0070668_1009725991	3300005347	Switchgrass Rhizosphere	HLPVVGDKGKVRLIAAERRIARAVGEGVVRIAEGYDRSVELVSGRALKGIQVFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRADEAAIALSARAKGPVKQPIAKPTMKKARAGKRVRRAA*
Ga0070671_1001759812	3300005355	Switchgrass Rhizosphere	GEGVVRIAQGYDRGIEFVSGQALKGLETFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA*
Ga0070674_1012987441	3300005356	Miscanthus Rhizosphere	YGNAARSLVAAYRTASERALAASGSRYVKLVERTPLPLVGDEGKARMVAAERRVAGIVGEGVARIAQGHDRAIELISSQALKGLEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRIDDAASALSARAEGTIEQPVAKPAVKKQPAKRVRRAA*
Ga0070659_1011614792	3300005366	Corn Rhizosphere	PLPVVGGERKARIVAAEQRFAEVVGKGVVRITQGYDRGIELVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA*
Ga0070678_1023182551	3300005456	Miscanthus Rhizosphere	LVAAYRTGSKRALAASGSRYAKLVEWAPLPVVSGESKARIVAAERRIADVVGEGVVRIAQGYDRGIEFVSGQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLASALSARAEGTVAQAAAKPAMKKARVAKRVRRTA*
Ga0068867_1006513482	3300005459	Miscanthus Rhizosphere	YAKLVERLPLVADDNKARLVAAERRVAATVGEGVTRIADGYDRGIEFVSGKVVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATSTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA*
Ga0070686_1014251941	3300005544	Switchgrass Rhizosphere	LAGAVGAGVSRIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA*
Ga0070664_1000461802	3300005564	Corn Rhizosphere	MSTNVTLNSIATDVVGRYGNAAKNLVAAYRTVSERALAANGSRYAKLVERLPLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA*
Ga0068854_1007256411	3300005578	Corn Rhizosphere	EGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLATALSARAEGTIAKPAAKKARVAKRARRTA*
Ga0068866_112182601	3300005718	Miscanthus Rhizosphere	SLVAAGRTASRRALAVSGRRYAKLVERTPLPVVGAESKARIVAAEQRVAAVFGEGVGRIAQGFDRGIELVSGQALKGLEAFVQRTDWAKNMFVVDTVRRINLPAAKLSLKIASRIDEAAGALSARAKGTVEHPHAKPAVKKVRAAKRVSRAA*
Ga0068861_1026813221	3300005719	Switchgrass Rhizosphere	LPVVGGESKARIVAAERRVAEVVGEGVVRIAQGYERGIEFVSSQALKGLDTFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLATALSARAEGTIAKPAAKKARVAKRARRTA*
Ga0068870_108874071	3300005840	Miscanthus Rhizosphere	SKARIVAAERRVAGVVGEGVERTAQGYDRAIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLATALSARAEGTIAKPAAKKARVAKRARRTA*
Ga0068863_1013811592	3300005841	Switchgrass Rhizosphere	SLSKRALAAGSRRYAQLVERAPLPVVGNGRKARIVAAEQRFAEVVGKGAVRVAQGYDRGIELVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRIDDAASALNVRAKGPVKRVVKPAVKKARSAKRVRRAA*
Ga0066652_1003839161	3300006046	Soil	MTATVTLNAIASDVVRHYGNAAKSLVAAYRTGSKRALAASGSRYAKLVERTRLPLVGDKGKARIVAAERRVAGVVGEGVARIAQGYDRDIEVISGQALKGLEGYARRTDWAKGMFVVETVRRINLPAANLSLKIAGRVEDAASALSARAEGTVERPVAKRAAKKQTAKRVRRAA*
Ga0074054_111828341	3300006579	Soil	GKARIVAAERRVAGVVGEGVARIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTLRRINLPAAKLSLKIASRVDDLASALSARAKGTVAQPVAKPAVKKARVAKRVRRTA*
Ga0079220_117926801	3300006806	Agricultural Soil	GYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA*
Ga0074063_139591321	3300006953	Soil	AKIVQRTSLPLVGEAGKARLAAAERRLAGVVVEGVSRTAQGYDRAIELVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINMPAAKLSLEIAIRLDDAANALSARVEGSPELTVPKPTVKKQTGKRVRRAA*
Ga0105240_114544881	3300009093	Corn Rhizosphere	ASGNRYALLVERARLPVVGAKGKARIVAAERRLAGAVGAGVSRIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA*
Ga0111539_127324111	3300009094	Populus Rhizosphere	PIVGDEGKARIVAAERRVAAVVGEGVARIAQGYDRGIEVVSGQMVKGLEALAERTEWTKDMFVVETARRINLPAAKLTLEIATRIDEAASTLNARAEGAVEQPVAKTAAKRARRATAKRVRRAA*
Ga0105238_100271051	3300009551	Corn Rhizosphere	AEQRVAGIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAVEPAVKTPVAKRVRRATKRARRAA*
Ga0126305_108400841	3300010036	Serpentine Soil	SRYAKLIERTPLVGDQGKARIVAAERRVAGVIGNGVEGIARGYDRGIELVAGQALKSLEAFAQRTDWAKDMFVVETARRINMPVATLSLRIASRIDDAAGALSARAEGTVAKPVAKAAVTKRAAKRVRRAG*
Ga0105239_122644431	3300010375	Corn Rhizosphere	GVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDDAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA*
Ga0126383_122269831	3300010398	Tropical Forest Soil	TASERALAASGSRYAKLVERLPLVSDEGKARIVAAERRVAEIIGEGVTRTAAGYDRGIEFVSGQALKGLEAIAQRTDWTKDMFVVETMRRINMPAAKLSLEIASRIDEASSTLSARVEAPAAKPVVKAVKRVRRAAGKRVRRAA*
Ga0126345_11970871	3300010858	Boreal Forest Soil	PVLDGTFMTTPLNAIAADVVVHYGSAAKSLVDTYRTGSKRALAASGRRFAKLVERAPLPLFRDEGKARIVAAERRVAEIVGEGVARTAQGYDRAIELVSSPLLKGLETFARRTDWTKNMFVVDTVRRVNLPAARLSLAIASRIDEAARTLKARAHGPVKSTAAKPAVKKQGPKRARGVVSRRVRSTA*
Ga0126346_11607501	3300010865	Boreal Forest Soil	LLDGTFMTTPLNVIAANVVVHYGSAAKSLVATYRTASKRVLAASGRRFAKLVERAPLPLIRDQGKARIVAAERRVAEIVGEGVARTAQGYDRAIELVSSPLLKGLETFALRTDWTKDMFVVDTVRRVNLPAARLSLAIASRIDEAARTLKARAHGPVEPTAAKPAVKKRGPKRARGVVSRRVRSAA*
Ga0150985_1012486331	3300012212	Avena Fatua Rhizosphere	KFVEGTRLPLVGDKGKARIVAAERRVAGVVGEGVARIAQGYDRGIELISGQALKGLEGFARRTDWAKGMFVVETVRRINLPAANLSLKIAGRVEDAASALSARAQGTVERPVAKRAAKKQTAKRVRRAA*
Ga0150985_1165864361	3300012212	Avena Fatua Rhizosphere	RIVAAERRVAAIVGEGVARIAQGYDRGIEFVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINLPAAGLSLKIASRIDDAAGMLSARAKGTVARRVAKPAVKKARAAKRVRRAA*
Ga0157349_10434631	3300012489	Unplanted Soil	MEVDCVVNAERPVAGVVGEGVARIAQGYDRGIELAVGQALKGLEAFAQRTDWAKDMFVVDTARRITRPSADLSLKIASRIDDAASTLSARAKGTVKAPIARPAMKKARATAKRAR
Ga0157351_10147271	3300012501	Unplanted Soil	RYAKLVERTRLPLVGEKGKARIVAAERRVAGVVGEGVARIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVETVRRINLPAAKLSLKIASRIEDAASALSARAGGTDGQPVAKPAVRKQTAKRVRRAA*
Ga0157347_10768982	3300012502	Arabidopsis Rhizosphere	VGEGVKRIADGYDRGIEFVSGQAVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDDATSTLSARAEGLVKPAVKTQAVKRARRGAAKRARRTA*
Ga0157332_10584411	3300012511	Soil	TASKRALAASGSRYAKLVERTPLPVVGGESKARIVAAERRVAGAVGEGVARTAQGYDRGIELVFGRVQKGLEAIAERTDWTKDMFVVETVRRIQLPAAKLSLEIASRFDEATSTLSARAEGAVEQPVAKPAVKKQAAKRARRATAKRVRRAA*
Ga0164299_105953111	3300012958	Soil	MLVERAPLPVVGAKGRARIVAAERRFAGAVGQGVSRIAEGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRIDDAASALSARAEGTVAKPVAKRTAKKVRAAKRVRRTA*
Ga0164308_121642771	3300012985	Soil	PVVSGESKARIVAAERRIADVVGEGVVRIAQGYDRGIEFVSGQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLASALSARAEGTVAQAAAKPAMKKARVAKRVRRTA*
Ga0164304_115970091	3300012986	Soil	DRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGTVAKPVAKRTAKKVRAAKRVRRTA*
Ga0157372_127404461	3300013307	Corn Rhizosphere	NGSRYAKLVERLPLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA*
Ga0157375_123588031	3300013308	Miscanthus Rhizosphere	SSNRYAKLVERTRLPLVGDEGKARIVAVERRVQGVVGEGVGRIAQGCDRGIELLSGQALKGLEAFAQRTDWAKDMFVVETVRRISLPAAKLSLEMASRIDEAASALSARAKGPVEQPIAKSAAKKRATKRVRRAV*
Ga0157376_111640562	3300014969	Miscanthus Rhizosphere	VVGEGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLATALSARAEGTIAKPAAKKARVAKRARRTA*
Ga0157376_115313811	3300014969	Miscanthus Rhizosphere	ALAASGSRYAKLVERLPIVADDNKARLVAAERRVAATVGEGVKRIADGYDRGIEFVSGQAVNGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATSTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA*
Ga0157376_125926061	3300014969	Miscanthus Rhizosphere	ERRLAGAVGAGVSRIAQGYDRGIELVSGQALKGLEAFVQRTDWAKNMFVVDTVRRINLPAAKLSLKIASRIDEAAGALSARAKGTVEHPDAKPAVKNVRAAKRVRRAA*
Ga0173480_104266071	3300015200	Soil	GSRYAKLVERTQLPVVGGESKARIVAAERRVAEVVGEGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRVDDLATALSARAEGTIAKPAAKKARVAKRARRTA*
Ga0132258_104941954	3300015371	Arabidopsis Rhizosphere	RIAQGCDRGIELLSGQALKGLEAFAQRTDWAKDMFVVETVRRISLPAAKLSLEMASRIDEAASALSARAKGPVEQPIAKSAAKKRATKRVRRAV*
Ga0132258_107031731	3300015371	Arabidopsis Rhizosphere	RVAEVVGEGVARIAQGYERGIEFVSGQALKGLETFAQRTAWAKDMFVVDTARRINLPAAKLSLKIASRVDDLASALSARAKGTVAQPVAKPAVKKARVAKRVRRTA*
Ga0132256_1030061561	3300015372	Arabidopsis Rhizosphere	MEVDCVVNAERPVAGVVGEGVARIAQGYDRGIELVSGQAQKGLEAFAQRTDWAKDMFVVETVRRISLPAAKRSLEMASRIDEAASALSARAKGPVEQPIAKSAAKKRATKRVRRAV*
Ga0132257_1000853243	3300015373	Arabidopsis Rhizosphere	MEVDCVVNAERPVAGVVGEGVARIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVETVRRINLPAAKLSLKIASRIEDAASALSARAGGTDGQPVAKPAVRKQTAKRVRRAA*
Ga0190274_100710221	3300018476	Soil	RVAGVLGEGVERTAQGYDRAIELVSGQAVNGLEALAERTDWAKDMFVVGALRRANLPVLKLSLEIASRIDDAASALNARVDRTERTAPKATAKKRTAKRIRRAA
Ga0190274_102144232	3300018476	Soil	LVGDESKARMVAAERRVAGIVGEGVARIAQGHDRAIELISSQALKGLEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRIDDAASALSARAEGTIEQPVAKPAVKKQPAKRVRRAA
Ga0190274_120922931	3300018476	Soil	AAERRVAGAVGERVVRIAQGFDRGIEFVSGQALKGLETFAQRTDWAKDLFVVDTVRRINLPAAKLSLKIASRIDHLASALSARAEGTVALRVAKPAVKRARVAKRVRRAA
Ga0190271_105368892	3300018481	Soil	MTTPITLNAIVSDAVGHYGNAAKSLVAASRTVSKRALVAGGSRFAELVERTPLPVVGDESKARIVAAERRVAGAVDERVVRIAQGFDRGIEFVSGQALKGLENFAQRTDWAKDLFVVDTVRRINLPAAKLSLKIASRIDHLASALSARAKGTVARPVAKPAVKRARVAKRVRRAA
Ga0208077_10092963	3300025427	Arctic Peat Soil	AAERRIAGVVNQGVARSAEGYDRAIELVSGQAVKGLEAFARRTDWAKNMFVVDAARRINMPAAKLSLEIAIRLDDAASALSARVEASPKQPVAKRAVKKQTAKRVRRAA
Ga0207682_102478861	3300025893	Miscanthus Rhizosphere	AEVVGKGVVRIAQGYDRGIELVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRIDDAASALNVRAKGPVKRVVKPAVKKARSAKRVRRAA
Ga0207680_102817822	3300025903	Switchgrass Rhizosphere	HYGNAAKNLVAAYRTASERALAASGSRYAKLVDRLPLVADDNKARLVAAERRVAATVGEGVTRIADGYDRGIEFVSGKVVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATGTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA
Ga0207657_104430842	3300025919	Corn Rhizosphere	EVVGKGVVRIAQGYDRGIELVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA
Ga0207694_107294601	3300025924	Corn Rhizosphere	MSTNVTLNSIATDVVGRYGNAAKNLVAAYRTVSERALAANGSRYAKLVERLPLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0207701_113940461	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GKVRLIAAERRIARAVGEGVVRIAEGYDRSVELVSGRALKGIQVFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRADEAAIALSARAKGPVKQPIAKPTMKKARAGKRVRRAA
Ga0207644_110432541	3300025931	Switchgrass Rhizosphere	RIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLETASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0207690_102208721	3300025932	Corn Rhizosphere	RIADGYDRGIEFVSGQAVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATGTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA
Ga0207690_106952751	3300025932	Corn Rhizosphere	GAKGKARIVAAERRLAGAVGAGVSRIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA
Ga0207709_101977413	3300025935	Miscanthus Rhizosphere	GEGVERIAQGYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAKGTAAKPAVKKARVAKRVRRTA
Ga0207704_101024971	3300025938	Miscanthus Rhizosphere	YDRGIEFVSGKVVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATGTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA
Ga0207711_101584722	3300025941	Switchgrass Rhizosphere	VERAPLPVVGAKGKARIVAAERRLAGAVGAGVSRIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRIDDAASALSARAEGRVAKRVAKPAVKKARAAKRVRRTA
Ga0207661_108847701	3300025944	Corn Rhizosphere	ERALAANGSRYAKLVERLPLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0207651_106865212	3300025960	Switchgrass Rhizosphere	APLPVVGNGRKARIVAAEQRFAEVVGKGAVRVAQGYDRGIELVSSQALKGIEAFAQRTDWAKDMFVVDTVRRINLPAAQLSLKIASRIDNAASALNVRAKGTVKRVVKPAVKKARSVKRVRRAA
Ga0207668_106855711	3300025972	Switchgrass Rhizosphere	KRALVASGSRYAKLVKWAPLPVVGGESKARIVAAEQRVAGIVGEGVERIAQGYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAKGTAAKPAVKKARVAKRVRRTA
Ga0207668_111544611	3300025972	Switchgrass Rhizosphere	THLPVVGDKGKVRLIAAERRIARAVGEGVVRIAEGYDRSVELVSGRALKGIQVFAQRTDWAKDMFVVDTVRRINLPVAKLSLKIASRADEAAIALSARAKGPVKQPIAKPTMKKARAGKRVRRAA
Ga0207677_105514532	3300026023	Miscanthus Rhizosphere	KARIVAAEQRFAEVVGKGAVRVAQGYDRGIELVSSQALKGIEAFAQRTDWAKDMFVVDTVRRINLPAAQLSLKIASRIDNAASALNVRAKGTVKRVVKPAVKKARSVKRVRRAA
Ga0207639_110030362	3300026041	Corn Rhizosphere	ARLVAAERRVAATVGEGVTRIADGYDRGIEFVSGKVVKGLEAFAERTEWTKDMFVVETARRVQLPAAKLSLEIASRIDEATGTLSARAEELGEPAVKTQAVKRARRGAAKRARRTA
Ga0207639_119823131	3300026041	Corn Rhizosphere	IMSTNVTLNSIATDVVGRYGNAAKNLVAAYRTVSERALAANGSRYAKLVERLPLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0207702_103702973	3300026078	Corn Rhizosphere	ERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0207698_108792231	3300026142	Corn Rhizosphere	PLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0207698_108924842	3300026142	Corn Rhizosphere	ERAPLPVVGGERKARIVAAEQRFAEVVGKGVVRIAQGYDRGIELVSGQALKGIEAFAQRTDWAKDMFVVDTVRRINLPAAKLSLKIASRIDDAASALNVRAKGPVKRVVKPAVKKARSAKRVRRAA
Ga0209465_103492952	3300027874	Tropical Forest Soil	AYRTASERALAASGSRYAKLVERLPLVGEEGKARIVAAERRVAEIVGEGVERTAAGYDRGIELVSGQVLKGLEAFAERTEWTKDMFVVETARRFQMPAAKLSLEIASRIDDASSSLNARVEAEQPVVKAVKSVARRRAGAKRVRRAA
Ga0247820_105049801	3300028597	Soil	LVAACHTASKRALVASGSRYAKLVKWAPLPVVGGESKARIVAAEQRVAGIVGEGVERIAQGYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAQGAAAKPAVKKARVAKRVRRTA
Ga0247827_108935181	3300028889	Soil	SYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAQGAAAKPAVKKARVAKRVRRTA
Ga0102770_107166111	3300030981	Soil	AKLVERAPLPLFRDEGKARIVAAERRVAEIVGEGVARTAQGYDRAIELVSSPLLKGLETFARRTDWTKNMFVVDTVRRVNLPAARLSLAIASRIDEAARTLKARAHGPVEPTAAKPAAKKRGPKRARGVVSRRVRSAA
Ga0307497_102197181	3300031226	Soil	KSLVAAYRTGSKRALAASGRRYAKLVERTRLPLVGEKGKARIVAAERRVAGVVGEGVARIAQGYDRGIELVSGQALKGLEAFAQRTDWAKDMFVVETVRSINLPAAKLSLKIASRIEDAASALSARAEGTVEQPVAKRAVKKRAAKRVRRAA
Ga0310886_111545072	3300031562	Soil	GIVGEGVERIAQSYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAQGAAAKPAVKKARVAKRVRRTA
Ga0307468_1018437921	3300031740	Hardwood Forest Soil	VERTRLPLVGEKGKARIVAAERRVAGVVGEGVARIAQGCDRGIELVSGQALKGLEAFAQRTDWAKDMFVVETVRSINLPVAKLSLEIASRIEDAASALSARAEGPVERPVAKRAVKKRAAQRVRRAA
Ga0318554_105322771	3300031765	Soil	ERRVAEIIGEGVTRTAAGYDRGIEFVSGQALKGLEAIAQQTDWTKDMFVVETMRRINMPAAKLSLEIASRIDEASGTLSARVEAPVAKPVVKAVKRVRRAAGKRVRRAA
Ga0318521_109218311	3300031770	Soil	VERLPLVSKEGKARIVAAERRVAEIIGEGVTRTAAGYDRGIEFVSGQALKGLEAIAQQTDWTKDMFVVETMRRINMPAAKLSLEIASRIDEASGTLSARVEAPVAKPVVKAVKRVRRAAGKRVRRAA
Ga0307473_115215441	3300031820	Hardwood Forest Soil	CDRGIELVSGQALKGLEAFAQRTDWAKDMFVVETVRSINLPVAKLSLEIASRIDDAASALSARAKGTVEHPVAKAAKKAAKRVRRAA
Ga0318567_108630592	3300031821	Soil	VAAERRVAEIVGEGVERTAAGYDRGIELVSGQVLKGLEAFAQRTEWTKDMFVVETARRIQMPAAKLSLEIASRIDDATGSLSARVEGEQPVAKAVKNVAKRRAGAKRVRRAA
Ga0310904_105775341	3300031854	Soil	LVERTPLPVVGAESKARIVAAEQRVAAVFGEGVGRIAQGFDRGIELVSGQALKGLEAFVQRTDWAKNMFVVDTVRRINLPAAKLSLKIASRIDDAAGALSARAKGTVEHPDAKPAVKNVRAAKRVRRAA
Ga0306925_114869132	3300031890	Soil	ERALAASGSRYAKLVERLPIVGDDGKAHIVAAERRVAEIVGEGVERTAAGYDRGIELVSGQVLKGLEAFAQRTEWTKDMFVVETARRIQMPAAKLSLEIASRIDDATGSLSARVEGEQPVAKAVKTVAKRRVGAKRVRRAA
Ga0308174_106106271	3300031939	Soil	MTATVTLNAIASDVVRHYGNAAKSLVAAYRTGSKRALAASGSRYAKFVEGTRLPLVGDKGKARIVAAERRVAGVVGEGVARIAQGYDRGIELISGQALKGLEGFARRTDWAKGMFVVETVRRINLPAANLSLKIAGRVEDAASALSARAEGTVERPVAKRSVKKQTAKRVRRAA
Ga0308176_107392581	3300031996	Soil	VAAYRTVSERALAANGSRYAKLVERLPLVGEESKARIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0310897_106044322	3300032003	Soil	GSRYAKLVKWAPLPVVGGESKARIVAAEQRVAGMVGEGVERIAQSYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAKGAAAKPAVKKARVAKRVRRTA
Ga0310902_102728711	3300032012	Soil	TASERALAAGGSRYAKLVERTQLPVVGGESKARIVAAERRVAEVVGEGVVRIAQGYERGIEFVSSQALKGLETFAQRTDWAKDMFVVDTVRRINLPAAKLSLEIASRIDDAASALSARAEGERPAAKRAAKKRIAKRVRRAA
Ga0308173_117917342	3300032074	Soil	RKARLIAAERRVAKVVGDGVARTAQGADRAIEVVVGQVLKGLEGFAQRTDWTKNMFVVDTLRRVNLPAAKLSLGIASRIDDAATTLSARAKGPVTQRVAKAATKKQPARRAGRAVAKRVRRAA
Ga0310810_102686984	3300033412	Soil	RIVAAERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0310810_111705111	3300033412	Soil	AERRVATIVGEGVERIADGYDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0310811_101077451	3300033475	Soil	YDRGIELVSGQMVKGLEAIAERTEWTKDMFVVETARRINMPAAKLSLEIASRIDEAASTLSARAEGAAVEPAVKKPVAKRVRRATKRARRAA
Ga0247829_104967101	3300033550	Soil	ARIVAAEQRVAGIVGEGVERIAQSYDRGIEYVSGQALKGLETFAQRTDWAKDMFVVDTLRRINLPTAKLSLKIASRVDDLASALNARAKGAAAKPAVKKARVAKRVRRTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099247

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences