Metagenome / Metatranscriptome Family F099241

Overview

Basic Information

• Family ID: F099241
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 103
• Average Sequence Length: 102 residues
• Representative Sequence: MARREREILEHAVRTVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
• Number of Associated Samples: 71
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 30.69 %
• % of genes near scaffold ends (potentially truncated): 31.07 %
• % of genes from short scaffolds (< 2000 bps): 72.82 %
• Associated GOLD sequencing projects: 67
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (65.049 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (23.301 % of family members)
• Environment Ontology (ENVO): Unclassified (45.631 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline) (45.631 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 42.31%
  β-sheet: 9.23%
  Coil/Unstructured: 48.46%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF08281	Sigma70_r4_2	6.80
PF04120	Iron_permease	3.88
PF01833	TIG	1.94
PF00561	Abhydrolase_1	0.97
PF08797	HIRAN	0.97
PF13411	MerR_1	0.97
PF02653	BPD_transp_2	0.97
PF05065	Phage_capsid	0.97
PF04545	Sigma70_r4	0.97
PF04402	SIMPL	0.97
PF07508	Recombinase	0.97
PF12697	Abhydrolase_6	0.97
PF13374	TPR_10	0.97
PF04326	AlbA_2	0.97
PF02738	MoCoBD_1	0.97
PF13683	rve_3	0.97
PF14329	DUF4386	0.97
PF12681	Glyoxalase_2	0.97
PF10756	bPH_6	0.97
PF05901	Excalibur	0.97
PF13643	DUF4145	0.97
PF12686	DUF3800	0.97
PF14559	TPR_19	0.97
PF13749	HATPase_c_4	0.97
PF09107	SelB-wing_3	0.97
PF00107	ADH_zinc_N	0.97
PF12399	BCA_ABC_TP_C	0.97
PF00496	SBP_bac_5	0.97
PF00188	CAP	0.97
PF00929	RNase_T	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.97
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.97
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.97
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.97
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.97
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
All Organisms	root	All Organisms	34.95 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
cellular organisms	root	All Organisms → cellular organisms	34.95 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.95 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.97 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.94 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.97 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.68 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.94 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.94 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.97 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1.94 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.94 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.97 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.97 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1.94 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.97 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.97 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.97 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.97 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1.94 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.97 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.97 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.97 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.97 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1.94 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.97 %
Mycobacterium heckeshornense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	0.97 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.97 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.97 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1.94 %
unclassified Hymenobacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter	0.97 %
Nocardioides sp. Soil774	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	0.97 %
Mycobacterium heckeshornense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	0.97 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.97 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1.94 %
Hymenobacter sp. IS2118	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp. IS2118	0.97 %
Nocardioides sp. Soil774	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	0.97 %
Mycobacterium heckeshornense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	0.97 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.97 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000858|JGI10213J12805_10157791	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp. IS2118	1373
3300000858|JGI10213J12805_10401044	All Organisms → cellular organisms → Bacteria	1715
3300000956|JGI10216J12902_100210547	All Organisms → cellular organisms → Bacteria	2822
3300002459|JGI24751J29686_10097003	Not Available	615
3300004114|Ga0062593_102496053	Not Available	585
3300004463|Ga0063356_101289596	Not Available	1067
3300004463|Ga0063356_102737568	Not Available	759
3300004463|Ga0063356_104946984	Not Available	573
3300004479|Ga0062595_100553410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	882
3300004479|Ga0062595_101115551	Not Available	691
3300004479|Ga0062595_102410487	Not Available	522
3300004480|Ga0062592_100032904	All Organisms → cellular organisms → Bacteria	2590
3300005093|Ga0062594_100002762	All Organisms → cellular organisms → Bacteria	4739
3300005093|Ga0062594_100651375	Not Available	937
3300005105|Ga0066812_1005530	Not Available	778
3300005169|Ga0066810_10000032	All Organisms → cellular organisms → Bacteria → Proteobacteria	8143
3300005185|Ga0066811_1000017	Not Available	3084
3300005334|Ga0068869_101604637	Not Available	579
3300005468|Ga0070707_101601292	Not Available	618
3300005617|Ga0068859_101722310	Not Available	692
3300006581|Ga0074048_13482254	All Organisms → cellular organisms → Bacteria	1791
3300006853|Ga0075420_100163888	Not Available	1948
3300009081|Ga0105098_10776336	Not Available	515
3300009094|Ga0111539_11246205	Not Available	863
3300009100|Ga0075418_12532724	Not Available	560
3300009146|Ga0105091_10379693	Not Available	701
3300009147|Ga0114129_10159443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	3084
3300009147|Ga0114129_10272883	Not Available	2262
3300009147|Ga0114129_12606127	Not Available	603
3300009147|Ga0114129_12800299	Not Available	580
3300009156|Ga0111538_12984415	Not Available	591
3300009157|Ga0105092_10008716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	5323
3300009157|Ga0105092_10445651	Not Available	739
3300009162|Ga0075423_11580665	Not Available	705
3300009168|Ga0105104_10929863	Not Available	511
3300009553|Ga0105249_13433453	Not Available	510
3300009811|Ga0105084_1010124	Not Available	1438
3300009815|Ga0105070_1061587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705
3300009817|Ga0105062_1059993	Not Available	708
3300009817|Ga0105062_1069055	Not Available	668
3300009823|Ga0105078_1061548	Not Available	516
3300009836|Ga0105068_1049381	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760
3300009836|Ga0105068_1122213	Not Available	521
3300010375|Ga0105239_13541541	Not Available	507
3300010403|Ga0134123_11061201	Not Available	831
3300012532|Ga0137373_10163085	Not Available	1868
3300017997|Ga0184610_1224488	Not Available	627
3300018028|Ga0184608_10255457	Not Available	771
3300018028|Ga0184608_10324590	Not Available	676
3300018052|Ga0184638_1008581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3412
3300018052|Ga0184638_1012231	All Organisms → cellular organisms → Bacteria	2930
3300018052|Ga0184638_1045267	Not Available	1600
3300018053|Ga0184626_10002668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6549
3300018053|Ga0184626_10029962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2243
3300018056|Ga0184623_10016282	Not Available	3264
3300018056|Ga0184623_10019985	Not Available	2964
3300018072|Ga0184635_10215538	Not Available	764
3300018072|Ga0184635_10241199	Not Available	716
3300018073|Ga0184624_10510500	Not Available	522
3300018074|Ga0184640_10162116	Not Available	1001
3300018076|Ga0184609_10014746	Not Available	2994
3300018076|Ga0184609_10055023	Not Available	1706
3300018076|Ga0184609_10073851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1497
3300018078|Ga0184612_10040112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2433
3300018078|Ga0184612_10061072	All Organisms → cellular organisms → Bacteria	1964
3300018078|Ga0184612_10151443	All Organisms → cellular organisms → Bacteria	1213
3300018078|Ga0184612_10158202	Not Available	1184
3300018081|Ga0184625_10022290	Not Available	3038
3300018081|Ga0184625_10078266	Not Available	1689
3300018081|Ga0184625_10083307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1638
3300018469|Ga0190270_10302786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1425
3300020003|Ga0193739_1162059	Not Available	527
3300021073|Ga0210378_10003352	All Organisms → cellular organisms → Bacteria	7790
3300021078|Ga0210381_10118386	Not Available	875
3300021081|Ga0210379_10069958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1428
3300022756|Ga0222622_10058713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2208
3300025926|Ga0207659_10361298	Not Available	1207
3300027379|Ga0209842_1023947	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1168
3300027379|Ga0209842_1044064	Not Available	817
3300027561|Ga0209887_1004090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4204
3300027561|Ga0209887_1107403	Not Available	560
3300027577|Ga0209874_1003773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4581
3300027577|Ga0209874_1008468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	3069
3300027577|Ga0209874_1016153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2152
3300027577|Ga0209874_1068741	All Organisms → cellular organisms → Bacteria → Terrabacteria group	885
3300027722|Ga0209819_10020091	Not Available	2209
3300027907|Ga0207428_10293695	Not Available	1204
3300027961|Ga0209853_1088158	Not Available	802
3300028719|Ga0307301_10044094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1364
3300028720|Ga0307317_10098941	Not Available	966
3300028722|Ga0307319_10106596	Not Available	899
3300028722|Ga0307319_10122203	Not Available	839
3300028807|Ga0307305_10515727	Not Available	535
3300028814|Ga0307302_10215472	Not Available	938
3300028819|Ga0307296_10077621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1768
3300028876|Ga0307286_10244713	Not Available	656
3300028878|Ga0307278_10141335	Not Available	1079
3300028878|Ga0307278_10256116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776
3300030006|Ga0299907_10124649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2122
3300032211|Ga0310896_10245179	Not Available	904
3300034176|Ga0364931_0013106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2229

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.55%
Host-Associated	Host-Associated	18.45%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.54%
Aquatic	Environmental → Aquatic	33.01%
Plants	Host-Associated → Plants	18.45%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.57%
Sediment	Environmental → Aquatic → Sediment	24.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.62%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.97%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	24.27%
Sand	Environmental → Terrestrial → Soil → Sand	17.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.83%
Loam	Environmental → Terrestrial → Soil → Loam	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	24.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.45%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	17.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	23.30%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	17.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_101577912	3300000858	Soil	VVRREREILEHAVRAVAEQAVKADELVDEAKAAGGGNHPVTVHAKMLRLELLKVKGDLERELEDFVLNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGQPTV*
JGI10213J12805_104010444	3300000858	Soil	MGRERDILEHAVHTVAEQAAKADDLVDEAKAAGGGDHPVTIHAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVSPGHRARREPAPHGEPAV*
JGI10216J12902_1002105474	3300000956	Soil	MARREREILEYALRTLAEQAAKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDVHWVSGLGITPGHWAHREPAPHGEPAV*
JGI24751J29686_100970032	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	RSTTSPIPRRAVRVVTEKAARADDLVDEAIDVRHGRSDPLVTHAKMLRLELLNVKAELERELEDFVLNCRKCGLDVHWVAGLGTQPGHWAHREPAPHGEPALS*
Ga0062593_1024960531	3300004114	Soil	RRDVLAFPHMARREREILEHAVRTIAEQAVKADELVDEARAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV*
Ga0063356_1012895962	3300004463	Arabidopsis Thaliana Rhizosphere	MARREREILEHAVHTVAEQAAKADDLVDEAINVGHGRSDPLVVHAKMLRLELLTVKADFERELEEFSLNCSKWGLDVHWVSGLGVKPGRWSHAEPAPHGEPTATGGRLALSRFDSGNRVQT*
Ga0063356_1027375681	3300004463	Arabidopsis Thaliana Rhizosphere	AGRRDVLAFPHMARREREILEHAVRTIAEQAVKADELVDEARAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV*
Ga0063356_1049469842	3300004463	Arabidopsis Thaliana Rhizosphere	PGEHSPTSPAEQKSPAPYRLPAGRRDVLAFLYMARREREILEHAVHTIAEQAAKADELVDEAMAAGGGDHPVTVHAKMLRLELLRVKADPERELEDFSLNCSGCGLDVHWVSGLGVSPGHRAHRDPAPHGEPVV*
Ga0062595_1005534101	3300004479	Soil	MARRERDILEHAVRTIAEQAAKADDLVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELETWVPNCTRCGLDVHWVSGLGVTPDHWAHREPAPHGEPAV*
Ga0062595_1011155511	3300004479	Soil	MSATTPVPAVQAEIIHLTIRLARREREILEHAVHTIAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGITPGHWAYREPAPHGEPAV*
Ga0062595_1024104872	3300004479	Soil	PPMARREREILEHAVRTIAEQAVKADELVGEAKAAGGGDHPVTVHAKMLRLELPKVKADLERELEDFSLDCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAI*
Ga0062592_1000329041	3300004480	Soil	MASREREILEHAVHTIAEHAAKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDAHWVSGLGVTPGHWAHREPAPHGEPAV*
Ga0062594_1000027629	3300005093	Soil	VQRREREILEHAVHTIAEQAVKADELVDEAKATGGGDHPVTVHAKMLRLELLKVKADLECELEDFVLDCSKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAI*
Ga0062594_1006513752	3300005093	Soil	MAHCEREILEHAVRTVAEQAAKADDLVAEAIAVGHGRSDPLVVHAKMLRLELLKVKADLERELEDFSLNCTNCGLDVHWVSGLGVTTGHLAHREPAPHGEPAV*
Ga0066812_10055302	3300005105	Soil	MARREREILEHAVRTVAEQAVKADELVDEARLPVAGDHPITVHAKMLRLELLKVKGAERELETWSLNCTKVRPRRALGVRARRVTGALGTPEPAPHGDPAV*
Ga0066810_100000329	3300005169	Soil	MARREREILEHAVRTVAEQAVKADELVDEAKLPVAGDHPITVHAKMLRLELLKVKGAERELETWSLNCTKCGLDVHWVSGLGVSTGALGTPEPAPHGDPAV*
Ga0066811_10000175	3300005185	Soil	MARREREILEHAVRTVAEQAVKADELVDEAKLPVAGDHPITVHAKMLRLELLKVKGAERELETWSLNCTKGGLDVHWVSGLGVSP
Ga0068869_1016046371	3300005334	Miscanthus Rhizosphere	VQRREREILEHAVHTIAEQAVKADELVDEAKATGGGDHPVTVHAKMLRLELLKVKADLECELEDFVLDCSKCGLDVHWVSGLGVSPGHWAHR
Ga0070707_1016012922	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQRREREILEHAVHTIAEQAVKADELVDEAKATGGGDHPVTVHAKMLRLELLKVKADLECELEDFVLDCSKCGLDVHWVSGLGVSP
Ga0068859_1017223101	3300005617	Switchgrass Rhizosphere	VQRREREILEHAVHTIAEQAVKADELVDEAKATGGGDHPVTVHAKMLRLELLKVKADLECELEDFVLDCSKCGLDVHWVSGLGVSPGHWAH
Ga0074048_134822543	3300006581	Soil	MARREREILEHAVRTVAEQAVKADELVDEARLPVAGDHPITVHAKMLRLELLKVKGAERELETWSLNCTKCGLDVHWVSGLGVVTGALGTPEPAPHGDPAV*
Ga0075420_1001638881	3300006853	Populus Rhizosphere	MARREREILEHAVHTVAEQAAKADDLVDEAIGVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFSLNCSKCRLDVHWVSGLGITPGHWSHAEPAPHGEPAV*
Ga0105098_107763361	3300009081	Freshwater Sediment	MQQREREILEHAVHAVTEQAARADDLVDEAIEVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVSPGHWAHREPAPHGYPAV*
Ga0111539_112462051	3300009094	Populus Rhizosphere	MAREREILEHAVRTIAEQATKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCSQCGLDVHWVSGLGVTPGHWAHGEPAPHGQPTI*
Ga0075418_125327241	3300009100	Populus Rhizosphere	MARRERDILEHAVRVVSEQAVKADELVDEAKAAGGGNHPVTVHAKMLRLELLKVKADLERELEDFSLNCSRCGLDVHWVSGLGVSPGHWAHREPAQYGEPAV*
Ga0105091_103796932	3300009146	Freshwater Sediment	VPNRERDILERAVHAVAEQAVKTDELVDEAKAAGGGGHPVTVHAKMLRLELLKVKADLEREFEDFVLNCSKCGLDVHWVSGLGVAPGHWAHREPAPHGEPAV*
Ga0114129_101594433	3300009147	Populus Rhizosphere	MARRERDILERAIHTLAEQAAKADELVDEAAAAGGRDHPVTIHAKMLRLELLNVKADLERELEDFVPNCRKCGLDVHWVSGLGVTPGHWAHREPAPHGEPAV*
Ga0114129_102728833	3300009147	Populus Rhizosphere	VQRREREILEHAVHTIAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFVLNCSKCGLDVHWVAGLGVTPGHWGHREPAPHGDPAL*
Ga0114129_126061272	3300009147	Populus Rhizosphere	MARRERDILEHAVRVVSEQAVKADELVDEAKAAGGGNHPVTVHAKMLRLELLKVKADLERELEDFSLNCSRCGLDVHWVSGLGVSPGHWAHREPA
Ga0114129_128002992	3300009147	Populus Rhizosphere	VFARSVVSEQAVNADEPFDEAKAAGGGDHRVTIHAKTLRLELLNVKADLQRKLETWSLNCTKCALDAHWVGRLGVTPGRRHAEPAQHEELAI*
Ga0111538_129844151	3300009156	Populus Rhizosphere	MARRERDILERAVHVVAEQAAKADDLVDEAIEVGHGRSDPLVTHAKMLRLELLNVKADLERELEDFSLNCSQCGLDVHWVSGLGVTPGHWAHGEPAPHGQPTI*
Ga0105092_100087165	3300009157	Freshwater Sediment	VARRERDVLEHAVHAVAEQAVKTDELVDEAKAAGGGGHPVTVHAKMLRLELLKVKADLEREFEDFVLNCSKCGLDVHWVSGLGVAPGHWAHREPAPHGEPAV*
Ga0105092_104456511	3300009157	Freshwater Sediment	MARREREILEHTVHTIAEQAAKADELVDEAKAAGGGDHPVTVHAKMLRLELLQVKADLERQLDTWSLNCTKCGLDVHWVSGLGVKPGHWGHREPAPHGEPTV*
Ga0075423_115806652	3300009162	Populus Rhizosphere	MSVREREILEHSVQAVAEQAAKANDLVDEALAAGLGASDPMVVHAKMLRLELLKVKADLERELATWVLDCTACGMEVHWVQGISVADPGHWGHRLPAPHGEAIV*
Ga0105104_109298631	3300009168	Freshwater Sediment	MARREREIEHAVHTIAEQAAKADDLVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELETWVPNRTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAI*
Ga0105249_134334531	3300009553	Switchgrass Rhizosphere	MARHEREILEHAVHAVAEQAIKADELVDEAKAAGGGDHPVTVQAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVTPGHWGHREPAPHGDPAV*
Ga0105056_10092232	3300009801	Groundwater Sand	MARRERDILEHAVRTIAEQAAKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERGLEDFVLNCSSCGLDGGWVAGLS*
Ga0105084_10101241	3300009811	Groundwater Sand	MARRERDILERAVHTIAEQAAKADELVDEAKAAGGGDHRVTVHTKMLRLELLKVKADLEHELETWVPNCSKCGLDVHCVAGLGVSPGHWAHREPAPRRAGRLAIRQTPPPY*
Ga0105070_10615872	3300009815	Groundwater Sand	VQAIADQAAKADDLVKEAAVAGGGDHPVTIHAKMLRLELLKVKADMERELETWVPNCSKCGLDVHWVAGLGVTPGHRAHREPAPHGEPVV*
Ga0105062_10599932	3300009817	Groundwater Sand	MARREREILEHAVRTIAEQDSKADELVGEAKAAGGGDHPVTVHAKMLRVELLKVKADLERELEDFVLNCSKCGLDIHWVSGLGVQPGHWAHREPAPHGAPAV*
Ga0105062_10690551	3300009817	Groundwater Sand	MARREREILEHAVRTVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV*
Ga0105078_10615482	3300009823	Groundwater Sand	MARRERQILEHAVHTVAEQAGKADDLVDEAIEVGHGRSDSLVGHAKMLRLQLLKVKADLERELEDFVLNCSACGLDVHWVSGLGVTPGHWAHREPAPHDEPAV*
Ga0105068_10493812	3300009836	Groundwater Sand	MARREREILEQTVRTLAEQAAKADDLVDDGKAAGGGDHQVTIHAKMLRLELLKVKADLDRELETWVPNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPDPGSRPGARGSKILLSS*
Ga0105068_11222131	3300009836	Groundwater Sand	MTQREQRVLESAIRTIAEQAAKADELVDEAIATGGGDHPVTVHAKMLRLELLKVKADLERELGTWVPNCSKCGLDVHWVAGLGVSPGHWAHREPAPHGEPAV*
Ga0105239_135415411	3300010375	Corn Rhizosphere	VQRREREILEHAVHTIAEQAVKADELVDEAKATGGGDHPVTVHAKMLRLELLKVKADLECELEDFVLDCSKCGLDVHWVSGLGVSPGHWAHREPAPHGEP
Ga0134123_110612011	3300010403	Terrestrial Soil	VHAVAEQAIKADELVDEAKAAGGGDHPVTVQAKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVTPGHWGHREPAPHGEPAV*
Ga0137373_101630854	3300012532	Vadose Zone Soil	MRTRERHVLEQAVHAVTEQAANEDALVDEAISVGHGRSDPLVTHAKMLRLELLNVKADLERELETWSLNCNKCGLDVHWVGGLGVSPGHWAHGEPAPHGEPAV*
Ga0184610_12244881	3300017997	Groundwater Sediment	MARREREILEHAVHTIAEQAAKADDLVDEATAAGGGSHQVTIHARMLRLELLKMKADLKRELEDFVLNCSKCGLDVRWVGGLGVSPDHWAHREPAPRGEPA
Ga0184608_102554571	3300018028	Groundwater Sediment	MARPERDILEHAVHTIAEQAVKADELVDEAKAAGGGNHPVTVHAKMLRLELLKVKADLERELEDFSLNCSRCGLDVHWVSGVGVSPGHWAHAEPAPHGEPAV
Ga0184608_103245901	3300018028	Groundwater Sediment	MARREREILEHAVRTVAEQAVEADELVDEAKAAGGGDHPVTVHAKMLRLELLRVKADLERELEDFVLNCSKCGLDVHWVPGLGVTPGHWGQARLVTRCHKEHAKAA
Ga0184638_10085818	3300018052	Groundwater Sediment	ASGRYVYEAESPRVMTQHERGNLERAVHVVAEQATKTDELVDEAIEIGHGRSDPLVVHAKMLRLELLNVKADLERELEDFVPNCSKCGLDVHWIAGLGVTPGHWAHREPAPHGAPLVSSDDESG
Ga0184638_10122312	3300018052	Groundwater Sediment	MKVRVIIYPPGMKRGGEREILEHTVRTVAEQAVKADELVDEAKAVGGGDHPVTVHAKMLRLELLKVKADLERELEDFSRNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0184638_10452672	3300018052	Groundwater Sediment	MAGSSSACGPTIPAMARGEREILEHAVHTIAEQAAKADDLVDEAIGVGHGRSDPLVTHAKMLRLELLKVKANLERELEDFILNCRKCGLEVHWVCGLGVTPGHWAHR
Ga0184626_100026686	3300018053	Groundwater Sediment	MTQRERGILERAVHVVAEQATKTDELVDEAIEIGHGRSDPLVVHAKMLRLELLNVKADLERELEDFVPNCSKCGLDVHWIAGLGVTPGHWAHREPAPHGAPLVSSDDESG
Ga0184626_100299624	3300018053	Groundwater Sediment	MIPRLHRAMPQREHDILERAVYVVAEQAAKADDLVDEAIDVGHGRSDPLVVHAKMLRLELLKVKADLERELEDFVLNCSRCGLDVHWVSGLGASPGHWAHREPAPHGAPRI
Ga0184623_100162826	3300018056	Groundwater Sediment	VARREREILEHAVHTVAEQAAKADDLVDEILAVGAGGSDPITVHAKMLCLELLNVKADLERELQDLSLNCSKCGLDVHWVSGLGVTPGHWSHAEPAPHGEPAV
Ga0184623_100199852	3300018056	Groundwater Sediment	MARRDRDILEHAVHAIAEQASKAHELVDEAAAAGGGDHPVTIHAKMLRLELLKVKADLERELEDLVPNCKKCGLDVHWIAGLGVSPGHWGHREPAPHGDPMV
Ga0184635_102155382	3300018072	Groundwater Sediment	MARREREILEHAVRTIAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDVHWVGGLGVSPGHWAHREP
Ga0184635_102411991	3300018072	Groundwater Sediment	MARREREILEHAVRTVAEQAVEADELVDEAKAAGGGDHPVTVHAKMLRLELLRVKADLERELEDFVLNCSKCGLDVHWVPGLGVTPGHWGQARLVTRCHKEHAKAACSRAY
Ga0184624_105105001	3300018073	Groundwater Sediment	MARREREILEHAVRTVAEQAVEADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDVHWVSGLGVTPGHWAHREPAPHGEPAV
Ga0184640_101621161	3300018074	Groundwater Sediment	MARREREILEHAVRTVAEHAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFVLDCSKCGLDVHWVSGLGVSPGH
Ga0184609_100147463	3300018076	Groundwater Sediment	MAGSSSACGPTIPAMARGEREILEHAVHTIAEQAAKADDLVDEAIGVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFILNCSKCGLEVHWVCGLGVTPGHWAHR
Ga0184609_100550234	3300018076	Groundwater Sediment	MRTRERHILEHVIHAVAEQAAKADELVDEAIDVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFVLNCSKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0184609_100738513	3300018076	Groundwater Sediment	YGRHDYRRDALTSQQERHILERAVHAVAEQAAKADELVDESKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTKCGLDVHWVSGLGVSPGRWAHAEPAPHGEPAV
Ga0184612_100401123	3300018078	Groundwater Sediment	MAGSSSACGPTIPAMARGEREILEHAVHTIAEQAAKADDLVDEAIGVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFILNCSKCVLEVHWVCGLGVTPGHWAHR
Ga0184612_100610723	3300018078	Groundwater Sediment	MARQERDILEHAVRVVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLDRELAAWVLDCKACGMEVHWVPGVSMADPGHWGHRRPAPHGDPVV
Ga0184612_101514432	3300018078	Groundwater Sediment	MARREREILEHAVRTIAEQAVKADELVDEAIDVGHGRSDPLVTHTKMLRLELLNVKADLERELEDFSLNCTKCGLDVHWVSGLGITPGHWAHREPAPHGEPMV
Ga0184612_101582023	3300018078	Groundwater Sediment	MARERDILEHAIHAVADQAQKADALVDEAIDVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFSLNCKKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0184625_100222901	3300018081	Groundwater Sediment	MARRERETLEHAVHTIAEQAAKADDLVDEAIGIGHGRADPLVTHAKMLRLELLNVKADLEHELEDFSLNCSKCGLDVHWVSGLGV
Ga0184625_100782663	3300018081	Groundwater Sediment	VTPAGRREVLAFPGMAREREILEHAVHTIAEQAAKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTECGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0184625_100833072	3300018081	Groundwater Sediment	MARREREILEHAVRTVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFVLNCSKCGLDVHWVSGLGVSPGHWGHREPASHGEPAV
Ga0190270_103027862	3300018469	Soil	MARREREILEHAVHTIAEQAAKADNLVKEAAAAGGGDHPVTIHAKMLRLELLKVKGDLERELETWSLNCTKCGLDVHWVSGLGITPGHWAHGEPAPHGEPAF
Ga0193739_11620591	3300020003	Soil	LSRRERHILERAVHAVADQATKADALVDEANEVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFVLDCRACGMDVHWVSGLGNTPGHWAH
Ga0210378_100033521	3300021073	Groundwater Sediment	VIQRERHILERAVHAVTEQAAKADDLVDEAIEVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFVLNCRKCGLDVHWVSGLGIQPGHWAHREPAPHGEPTIQRA
Ga0210381_101183861	3300021078	Groundwater Sediment	MARREREILEHAVRTVAEQAVEADELVDEAKAAGGGDHPVTVHAKMLRLELLRVKADLERELEDFVLNCSKCGLDVHWVPGLGVTPGHWGQARLVTRCHKEHAKAAC
Ga0210379_100699581	3300021081	Groundwater Sediment	MTASYKLPAGQRDVLAFPHMARREREILEHAVRTLAEQAVKADELVDEAKTAGGGDHPVTIHAKMLRLELLNVKADLERELETWVPNCSKCGLDVHWVSGLGVTPGHWGHREPAPHGEPA
Ga0222622_100587132	3300022756	Groundwater Sediment	MARREREILEHAVRTIAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFVPNCKKCGLDVHWVPGLGVSPGHWAHREPAPHGEPSV
Ga0207659_103612981	3300025926	Miscanthus Rhizosphere	VQRREREILEHAVHTIAEQAVKADELVDEAKATGGGDHPVTVHAKMLRLELLKVKADLECELEDFVLDCSKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAI
Ga0209896_10080892	3300027006	Groundwater Sand	MARRERDILEHAVRTIAEQAAKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERGLEDFVLNCSSCGLDGGWVAGLS
Ga0209842_10239471	3300027379	Groundwater Sand	MARRERQILEHAVHTVAEQAGKADDLVDEASEVGHGRSDSLVVHAKMLRLQLLKVKADLERELEDFVLNCSACGLDVHWVSGLGVTPGHWAHREPAPHDEPAV
Ga0209842_10440641	3300027379	Groundwater Sand	MARREREILEHAVRTVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0209887_10040906	3300027561	Groundwater Sand	MAREREILEHAVHTIAEQAAKADELVDEAKAAADHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDVHWVSGLGVTPGHWAHREPAPHGEPSV
Ga0209887_11074031	3300027561	Groundwater Sand	AISQWRRLVTPCFHYSSMARRERQILEHAVHTVAEQAGKADDLVDEASEVGHGRSDSLVVHAKMLRLQLLKVKADLERELEDFVLNCSACGLDVHWVSGLGVTPGHWAHREPAPHDEPAV
Ga0209874_10037735	3300027577	Groundwater Sand	VHAVTEQAAKADDLVDEAIDIGHGRSDPLVTHAKMLRLELLNVKADLERELEDFSLNCTKCGLDVHWVSGLGVSPGHWAHGEPAPHGEPDPRSRPDARGSILRLGLSAHGVGGI
Ga0209874_10084685	3300027577	Groundwater Sand	MARREREILEHAVRTIAEQDSKADELVGEAKAAGGGDHPVTVHAKMLRVELLKVKADLERELEDFVLNCSKCGLDVHWVSGLGVQPGHWAHREP
Ga0209874_10161536	3300027577	Groundwater Sand	MAREREILEHAVHTIAEQAAKADELVDEAKAAADHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDVHWVSGLGVTPGHW
Ga0209874_10687412	3300027577	Groundwater Sand	MARRERQILEHAVHTVAEQAGKADDLVDEASEVGHGRSDSLVVHAKMLRLQLLKVKADLERELEDFVLNCSACGLDVHWVSGLGVTPGHWAHREPAPHDE
Ga0209819_100200911	3300027722	Freshwater Sediment	VARRERDVLEHAVHAVAEQAVKTDELVDEAKAAGGGGHPVTVHAKMLRLELLKVKADLEREFEDFVLNCSKCGLDVHWVSGLGVAPGHWAHREPAPHGEPAV
Ga0207428_102936953	3300027907	Populus Rhizosphere	AAKADDLVDEAIGVGHGRSDPLVTHAKMLRLELLKVKADLERELEDFSLNCSKCRLDVHWVSGLGITPGHWSHAEPAPHGEPAV
Ga0209853_10881582	3300027961	Groundwater Sand	MAREREILEHAVHTIAEQAAKADELVDEAKAAGGADHPVTVHAKMLRLELLKVKADLERELETWVPNCTKCGLDVHWVSGLGVSPGHWAHREPAPHGEPDPGSRPG
Ga0307301_100440942	3300028719	Soil	MARREREILEHAVRTVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFVLSCSKCGLDVHWVSGLGVSPGHWGHREPASHGEPAV
Ga0307317_100989411	3300028720	Soil	MARREREILEHAVRTVAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLEPELEDFVLSCSKCGLDVHWVSGLGVSPGHWGHREPASHGEPAV
Ga0307319_101065963	3300028722	Soil	VQQREREILEQAVHAIAEQAVKADDLVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTECGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0307319_101222031	3300028722	Soil	MARREREILEHAVRTVAEQAVEADELVDEAKAAGGGDHPVTVHAKMLRLELLRVKADLERELEDFVLNCSKCGLDVHWVPGLGVTPGHWGQARLVTRFHKEHAKAACSRAY
Ga0307305_105157271	3300028807	Soil	MARREREILEHAVHAIAEQAAKADEIVKEAALAGGGDHPVTLHAKMLRLEPLKVKADLERELGTWVPNCTKCGLDVHWVAGLGASPGHWAQAEPAPH
Ga0307302_102154722	3300028814	Soil	MARREREILEHAVHTIAEQAAKADDLVDEAIGVGQGRSDPLVVHGKMLRLELLKVKADLERELEDFSLNCSKCGLDVHWVSGLGVSPGHWAHGEPAPHGEPAV
Ga0307296_100776213	3300028819	Soil	MARRERDILERAVHTIAEQAVKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFVPNCKKCGLDVHWVPGLGVSPGHWAHREPAPHGEPSV
Ga0307286_102447131	3300028876	Soil	REILEQAVHAIAEQAVKADDLVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTECGLDVHWVSGLGVSPGHWAHREPAPHGEPAV
Ga0307278_101413352	3300028878	Soil	VARREREILERAVRTIAEQAMKADELVDEAKAAGGGDHPVTVHAKMLRLELLKVKADLERELEDFSLNCTKCGLDVHWVSGLGITPGHWAHREPAPHGEPTV
Ga0307278_102561162	3300028878	Soil	MARREREILEHAIHTIAEQAANADDLVDEAIAVGHGRSDPLVTHAKMLRLRLELLKVKADLERELETWVPNCAKCGLDVHWVGGLGVSPGHWAHAEPAPHGEPAF
Ga0299907_101246494	3300030006	Soil	VEETPPPPQTTADQAAKADDLVDEAIDVGHGRSDPLVVHAKMLRLELLKVKADLERELEDFVLNCENCGLDVHWVSGLGVSPGHWVHREPAPHGEPLV
Ga0310896_102451792	3300032211	Soil	LDSLRPQAAKADDLVDEAIAVGRGRSDPLVVHAKMLPMELLKVNADLERELEDFSLNCSNGGLDVHWISGLGVTPGHWSHAEPAPHGELAVLPA
Ga0364931_0013106_694_1002	3300034176	Sediment	MARREREILEHAVRTLAEQAVKADELVDEAKTAGGGDHPVTIHAKMLRLELLNVKADLERELETWVPNCSKCGLDVHWVSGLGVTLGHWGHREPAPHGEPAV