NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F099169

Metagenome Family F099169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099169
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 64 residues
Representative Sequence MNQTIAEALAPFRPLTYTEHYYIDLGYRHELGKANQHEYKRAQAEGPEARRLLNRGAMEAMTR
Number of Associated Samples 64
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 91.26 %
% of genes near scaffold ends (potentially truncated) 13.59 %
% of genes from short scaffolds (< 2000 bps) 62.14 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.757 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(35.922 % of family members)
Environment Ontology (ENVO) Unclassified
(64.078 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(63.107 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.75%    β-sheet: 0.00%    Coil/Unstructured: 47.25%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF03237Terminase_6N 5.83
PF16510P22_portal 2.91
PF00476DNA_pol_A 2.91
PF10926DUF2800 0.97
PF00271Helicase_C 0.97
PF00166Cpn10 0.97
PF11134Phage_stabilise 0.97
PF11351GTA_holin_3TM 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 2.91
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.76 %
All OrganismsrootAll Organisms25.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002161|JGI24766J26685_10048797Not Available955Open in IMG/M
3300002161|JGI24766J26685_10056449Not Available873Open in IMG/M
3300002835|B570J40625_100012691Not Available15069Open in IMG/M
3300004112|Ga0065166_10206370Not Available775Open in IMG/M
3300004461|Ga0066223_1306131Not Available694Open in IMG/M
3300006030|Ga0075470_10013206Not Available2554Open in IMG/M
3300006641|Ga0075471_10246682All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage919Open in IMG/M
3300006641|Ga0075471_10602758Not Available539Open in IMG/M
3300006917|Ga0075472_10728654Not Available500Open in IMG/M
3300008055|Ga0108970_10892612All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2346Open in IMG/M
3300008266|Ga0114363_1070468Not Available1330Open in IMG/M
3300008267|Ga0114364_1074208All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1135Open in IMG/M
3300009068|Ga0114973_10000797Not Available23694Open in IMG/M
3300009068|Ga0114973_10588760Not Available571Open in IMG/M
3300009152|Ga0114980_10009967All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6136Open in IMG/M
3300009152|Ga0114980_10011954Not Available5545Open in IMG/M
3300009152|Ga0114980_10091573All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1820Open in IMG/M
3300009154|Ga0114963_10031656All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3482Open in IMG/M
3300009158|Ga0114977_10091121Not Available1856Open in IMG/M
3300009158|Ga0114977_10117682All Organisms → Viruses → Predicted Viral1603Open in IMG/M
3300009158|Ga0114977_10739524All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage521Open in IMG/M
3300009159|Ga0114978_10036199All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3488Open in IMG/M
3300009159|Ga0114978_10146435All Organisms → Viruses → Predicted Viral1525Open in IMG/M
3300009159|Ga0114978_10459102Not Available754Open in IMG/M
3300009163|Ga0114970_10059561Not Available2440Open in IMG/M
3300009163|Ga0114970_10189939All Organisms → Viruses → Predicted Viral1214Open in IMG/M
3300009164|Ga0114975_10041866All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2719Open in IMG/M
3300009164|Ga0114975_10592457Not Available592Open in IMG/M
3300009165|Ga0105102_10091832Not Available1412Open in IMG/M
3300009165|Ga0105102_10880394Not Available515Open in IMG/M
3300009168|Ga0105104_10071141Not Available1880Open in IMG/M
3300009183|Ga0114974_10492010Not Available689Open in IMG/M
3300009184|Ga0114976_10123007Not Available1468Open in IMG/M
3300009184|Ga0114976_10242652Not Available979Open in IMG/M
3300010885|Ga0133913_11371080Not Available1801Open in IMG/M
3300010885|Ga0133913_12154105Not Available1377Open in IMG/M
3300010885|Ga0133913_12674952Not Available1208Open in IMG/M
3300010885|Ga0133913_12900977All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1149Open in IMG/M
3300010970|Ga0137575_10000363Not Available9581Open in IMG/M
3300010970|Ga0137575_10075503Not Available535Open in IMG/M
3300011336|Ga0153703_1411Not Available14788Open in IMG/M
3300012352|Ga0157138_1009259Not Available1631Open in IMG/M
3300014711|Ga0134314_100004Not Available39058Open in IMG/M
3300014811|Ga0119960_1006319All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104998Open in IMG/M
3300014811|Ga0119960_1029251Not Available788Open in IMG/M
3300017707|Ga0181363_1046458All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage786Open in IMG/M
3300017747|Ga0181352_1011789Not Available2816Open in IMG/M
3300017747|Ga0181352_1104887Not Available773Open in IMG/M
3300017754|Ga0181344_1086799Not Available915Open in IMG/M
3300017754|Ga0181344_1122712All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage748Open in IMG/M
3300017754|Ga0181344_1136626Not Available702Open in IMG/M
3300017754|Ga0181344_1176790Not Available604Open in IMG/M
3300020506|Ga0208091_1025836Not Available670Open in IMG/M
3300021438|Ga0213920_1001380Not Available13542Open in IMG/M
3300021956|Ga0213922_1048585Not Available951Open in IMG/M
3300022179|Ga0181353_1040294Not Available1235Open in IMG/M
3300022179|Ga0181353_1049717Not Available1100Open in IMG/M
3300022407|Ga0181351_1008359Not Available4127Open in IMG/M
3300022407|Ga0181351_1073221All Organisms → Viruses → Predicted Viral1382Open in IMG/M
3300025732|Ga0208784_1000766Not Available14582Open in IMG/M
3300025848|Ga0208005_1136393Not Available765Open in IMG/M
3300027708|Ga0209188_1001966Not Available15680Open in IMG/M
3300027733|Ga0209297_1002435Not Available10296Open in IMG/M
3300027733|Ga0209297_1217673Not Available748Open in IMG/M
3300027734|Ga0209087_1023454All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3010Open in IMG/M
3300027734|Ga0209087_1033426Not Available2443Open in IMG/M
3300027734|Ga0209087_1299936Not Available573Open in IMG/M
3300027736|Ga0209190_1008033Not Available6510Open in IMG/M
3300027736|Ga0209190_1021114Not Available3648Open in IMG/M
3300027763|Ga0209088_10011925Not Available4665Open in IMG/M
3300027763|Ga0209088_10023002All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3202Open in IMG/M
3300027763|Ga0209088_10216198Not Available812Open in IMG/M
3300027782|Ga0209500_10140480All Organisms → Viruses → Predicted Viral1147Open in IMG/M
3300027805|Ga0209229_10015008All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3298Open in IMG/M
3300027900|Ga0209253_10681439Not Available744Open in IMG/M
3300027971|Ga0209401_1002263Not Available12534Open in IMG/M
3300027973|Ga0209298_10103337Not Available1241Open in IMG/M
3300028025|Ga0247723_1000613Not Available23758Open in IMG/M
3300028025|Ga0247723_1005634Not Available5610Open in IMG/M
3300028025|Ga0247723_1006505Not Available5095Open in IMG/M
3300028025|Ga0247723_1043038Not Available1332Open in IMG/M
3300028025|Ga0247723_1046135Not Available1269Open in IMG/M
3300028025|Ga0247723_1053846All Organisms → Viruses → Predicted Viral1139Open in IMG/M
3300031885|Ga0315285_10087676Not Available2757Open in IMG/M
3300033980|Ga0334981_0114682Not Available1322Open in IMG/M
3300033981|Ga0334982_0115464Not Available1399Open in IMG/M
3300033981|Ga0334982_0122877Not Available1347Open in IMG/M
3300033992|Ga0334992_0052174All Organisms → Viruses → Predicted Viral2323Open in IMG/M
3300033994|Ga0334996_0118928Not Available1513Open in IMG/M
3300034012|Ga0334986_0007834Not Available7888Open in IMG/M
3300034012|Ga0334986_0011191Not Available6419Open in IMG/M
3300034020|Ga0335002_0200895Not Available1239Open in IMG/M
3300034061|Ga0334987_0767816Not Available542Open in IMG/M
3300034062|Ga0334995_0139063All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1771Open in IMG/M
3300034063|Ga0335000_0033587All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3765Open in IMG/M
3300034101|Ga0335027_0007884Not Available9283Open in IMG/M
3300034101|Ga0335027_0021224Not Available5509Open in IMG/M
3300034101|Ga0335027_0056331All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3152Open in IMG/M
3300034106|Ga0335036_0639978Not Available639Open in IMG/M
3300034112|Ga0335066_0565090Not Available593Open in IMG/M
3300034200|Ga0335065_0651650Not Available608Open in IMG/M
3300034283|Ga0335007_0055432Not Available3043Open in IMG/M
3300034356|Ga0335048_0328237Not Available783Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake35.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater18.45%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake11.65%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.83%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment5.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.91%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment2.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.94%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.94%
AquaticEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic1.94%
Pond Fresh WaterEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water1.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater1.94%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.97%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.97%
Surface WaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water0.97%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.97%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002161Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USAEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300010970Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1, april 2016EnvironmentalOpen in IMG/M
3300011336Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - PaldangEnvironmentalOpen in IMG/M
3300012352Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37EnvironmentalOpen in IMG/M
3300014711Surface water microbial communities from Bangladesh - BaraHaldiaSW0111EnvironmentalOpen in IMG/M
3300014811Aquatic viral communities from ballast water - Michigan State University - AB_ballast waterEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021438Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MGEnvironmentalOpen in IMG/M
3300021956Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MGEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025848Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300031885Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36EnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033992Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034020Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24766J26685_1004879723300002161Freshwater And SedimentMNPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY*
JGI24766J26685_1005644933300002161Freshwater And SedimentMNDIMREALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMSRWCY*
B570J40625_100012691253300002835FreshwaterMNKTIAEALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGPEARRLMNRGALEAMTRSY*
Ga0065166_1020637033300004112Freshwater LakeMNQTIAEALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGAEARRLLNRGALEAMTRSY*
Ga0066223_130613113300004461MarineMNQVIAEALAPFRPLTYTEHYYVELGYQDERGKANEHEYKRAQAEGQEARRLLNRGAMEAMMR*
Ga0075470_1001320663300006030AqueousMNPTIAEALAPFRPLTYTEHYYIDLGYRHELGKANDHEYRMAMAEGPEARRLIHRGAMEAMTRWP*
Ga0075471_1024668213300006641AqueousMTHPTIADALAPFRPLTYTEHYYIDLGYRHELGKANEHEYKRAQAEGAQARRLLNRGAMEAMTRWP*
Ga0075471_1060275833300006641AqueousMNATIAEALAPFRPLTYTEHYYIDLGYRHELGKANQHEYKRAQAEGPEARRLLNRGAMEAMTR*
Ga0075472_1072865413300006917AqueousMNKTIAEALAPFRPLTYTEHYYIDLGYRHELGKANEHEYKRAQAEGPDARRLLHRGAMEAMTR*
Ga0108970_1089261293300008055EstuaryMTHPVIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKRAYDEGPQARRLLNRGALEAMQRAY*
Ga0114363_107046823300008266Freshwater, PlanktonMNPTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMSRWCY*
Ga0114364_107420843300008267Freshwater, PlanktonMTHPTIVEALAPFRPLTYTEHYYIDLGYRYERGKADEHEYKRAQAEGREARRLLDRGASEAFKWSY*
Ga0114973_10000797253300009068Freshwater LakeMNPVIQEALAPFRPLTYTEHYYVDLGYRYELGKAEDYEYKQAQAEGAQARRLLNRGAMEAMMR*
Ga0114973_1058876023300009068Freshwater LakeYLDGGVEMNQTIAEALAPFRPLTYTDHYYVDLGYRHELGKAEDYEFKAAQAEGAEARRLLNRGAMEAMMR*
Ga0114980_1000996743300009152Freshwater LakeMNQVIAEALAPFRPLTYTEHYYVELGYQHERGKANEHEYKRAQAEGQEARRLLNRGAMEAMMR*
Ga0114980_1001195423300009152Freshwater LakeMNQTILEALAPFRPLTYTEHYYIDLGYRHELGKANEHEYRRAQAEGQQARRLLNRGAMEAMMR*
Ga0114980_1009157333300009152Freshwater LakeMNEVIAEALAPFRPLTYTEHYYIELGYQHELGKANEHEYKRAQAEGQQARRLLNRGAIEAMMR*
Ga0114963_1003165613300009154Freshwater LakeMNEVIAEALAPFRPLTYTEHYYIELGYQHELGKANEHEYRRAQAEGQQARRLLNRGAMEAMMR*
Ga0114977_1009112153300009158Freshwater LakeMTHPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKRAQAEGQEARRLLNRGALEAMQRAY*
Ga0114977_1011768253300009158Freshwater LakeMNPVIAEALAPFRPLTYTEHYYIDLGYRHEQGKANEHEYKRAQAEGPEARRLMNRGALEAMTRSY*
Ga0114977_1073952423300009158Freshwater LakeMTHPVIAEALAPFRPLTYTEHYYIDLGYRHEQGKASEYEYKQAQAEGQEARRLLNRGAMEALQRRY*
Ga0114978_10036199133300009159Freshwater LakeMTHPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKRAQAEGQEARRLLNRGAMEAMTR*
Ga0114978_1014643523300009159Freshwater LakeMNDIMREALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMTRAY*
Ga0114978_1045910223300009159Freshwater LakeMNEVIAEALAPFRPLTYTEHYYIELGYQHELGKANEHEYKRAQAEGQQARRLLNRGAMEAMMR*
Ga0114970_1005956133300009163Freshwater LakeMNQTIAEALAPFRPLTYTDHYYVDLGYRHELGKAEDYEFKAAQAEGAEARRLLNRGAMEAMMR*
Ga0114970_1018993923300009163Freshwater LakeMNQTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEHEYKRAQAEGADARRLLNRGAMEAMMR*
Ga0114975_1004186663300009164Freshwater LakeMTHPVIAEALAPFRPLTYTEHYYVDLGYRHELGKISEHEYKTAMAEGPEARRLIYRGAMEAMTR*
Ga0114975_1059245723300009164Freshwater LakeHGSMYLDGGTEMNPVIAEALAPFRPLTYTEHYYIDLGYRHEQGKANEHEYKRAQAEGPEARRLMNWGALEAMTRSY*
Ga0105102_1009183213300009165Freshwater SedimentMNPTIAEALAPFRPLTYTEHYYVDLGYRYELGKAEDYEYKQAQAEGAQARRLMQRGAMEAMMR*
Ga0105102_1088039413300009165Freshwater SedimentMNPTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMTRAY*
Ga0105104_1007114113300009168Freshwater SedimentMNDTILYAISPFRPLTYTEHYYIDLGYRHELGKAEEYEYKRAQAEGQEARKLLNRGALEAMSRWCY*
Ga0114974_1049201023300009183Freshwater LakeMNPVIAEALAPFRPLTYTEHYYVELGYRHEQGKANEHEYKQAQAEGPEARRLLNRGALEAMTRSY*
Ga0114976_1012300723300009184Freshwater LakeMNQTIAEALAPFRPLTYTEHYYIDLGYRHEQGKASEYEYKQAQAEGQEARRLLNRGAMEALQRRY*
Ga0114976_1024265233300009184Freshwater LakeMNQTIAEALAPFRPLTYTEHYYVELGYQHELGKANEHEYKRAQAEGQQARRLLNRGAMEAMMR*
Ga0133913_1137108033300010885Freshwater LakeMNQTIAEALAPFRPLTYTEHYYVDLGYRHELGKISEHEYKTAMAEGPEARRLIYRGAMEAMTR*
Ga0133913_1215410523300010885Freshwater LakeMNPVIAEALAPFRPLTYTEHYYVDLGYRHEQGKANEHEYKQAYEEGQEARRLMNRGAMEALQRRY*
Ga0133913_1267495223300010885Freshwater LakeMNPVIAEALAPFRPLTYTEHYYVDLGYRHEQGKANEHEYKQAYEEGQEARRLMSRGAMEALQRRY*
Ga0133913_1290097733300010885Freshwater LakeMNDTILYAISPFRPLTYTEHYYIELGYKHEQGKADDHEYKRAYGEGPQARRLLNRGAMEALQRRY*
Ga0137575_10000363123300010970Pond Fresh WaterMTHPVIAEALAPFRPLTYTEHYYIDLGYRHEQGKANDHEYKRAQAEGPDARRLLNRGAMEAMQRAY*
Ga0137575_1007550313300010970Pond Fresh WaterMTHPVIAEALAPFRPLTYSEHYYIDLGYQHEEGKANKHEYKRAQAEGPDARRLLNRGAMEALQRRY*
Ga0153703_1411243300011336FreshwaterMTHPTIAEALAPFRPLTYAEHYYVDLGYQHELGKANEHEYKRAMAEGAEARRLLNRGALEAMTRSY*
Ga0157138_100925923300012352FreshwaterMNQTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY*
Ga0134314_100004193300014711Surface WaterMTHPLIAEALAPFRPLTYTEHYYIDLGYRYEQGKALEREYKEAQAEGPEARRLLYRGAMEAMMRAY*
Ga0119960_100631953300014811AquaticMNQTILYAISPFRPLTYTEHYYIDLGYRHELGKANEHEYKRSQAEGPQARRLLHRGAMEAMTRWP*
Ga0119960_102925113300014811AquaticMNQIIAEALAPFRPLTYTDHYYIDLGYRYELGKANDHEYKTAQAEGAQARRLLNRGAMEAMMR*
Ga0181363_104645823300017707Freshwater LakeMNQTIAEALAPFRPLTYTEHYYIDLGYRHELGKANEHEYKRAQAEGQEARRLLNRGAMEAMQCY
Ga0181352_101178933300017747Freshwater LakeMNQIIAEALAPFRPLTYTEHYYIDLGYRHERGKANEHEYKRAQAEGPQARRLLNRGAMEAMQCS
Ga0181352_110488733300017747Freshwater LakeMTHPTIAEALAPFRPLTYAEHYYIDLGYRHERGRANEHEYKAAMAEGPQARRLLNRGA
Ga0181344_108679913300017754Freshwater LakeEALAPFRPLTYTEHYYVDLGYQHELGKANEHEYKRAQAEGQEARRLLNRGAMEAMQCY
Ga0181344_112271223300017754Freshwater LakeVNQIIQEALAPFRPLTYTEHYYIDLGYRHELNKANEHEYKRAQAEGPEARRLLNRGAMEAMTRWP
Ga0181344_113662613300017754Freshwater LakeMNDTMLYAISPFRPLTYTEHYYIELGYMHDLGKANDHEYKQAMAEGPQARRLLSRGAMEAMMR
Ga0181344_117679023300017754Freshwater LakeMNQTIAEALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGQEARRLMNRGALEAMTRSY
Ga0208091_102583633300020506FreshwaterMNKTIAEALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGPEARRLMNRGALEAMTRSY
Ga0213920_1001380103300021438FreshwaterMNPVIAEALAPFRPLTYTEHYYVDLGYRHERGKANEHEYKRAQAEGPEARRLLNRGAMEAMQWS
Ga0213922_104858523300021956FreshwaterMNATIAEALAPFRPLTYAEHYYIDLGYRHELGKANEHEYKRAQAEGPEARRLLNRGAMEAMTR
Ga0181353_104029413300022179Freshwater LakeMNQIIAEALAPFRPLTYTEHYYIDLGYRHERGKANEHEYKRAQAEGPQARRL
Ga0181353_104971713300022179Freshwater LakePFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGAEARRLLNRGALEAMTRSY
Ga0181351_100835923300022407Freshwater LakeMNPVIAEALAPFRPLTYAEHYYVDLGYRHEQGKAPEYEYKQAQAEGPEARRLLNRGALEAMTRSY
Ga0181351_107322163300022407Freshwater LakeMNDTILYAISPFRPLTYTEHYYIDLGYQHELGKANEHEYKRAQAEGPQARRLLNRGAMEAMTRWP
Ga0208784_1000766143300025732AqueousMNPTIAEALAPFRPLTYTEHYYIDLGYRHELGKANDHEYRMAMAEGPEARRLIHRGAMEAMTRWP
Ga0208005_113639343300025848AqueousMTHPTIADALAPFRPLTYTEHYYIDLGYRHELGKANEHEYKRAQAEGAQARRLLNRGAMEAMTRWP
Ga0209188_1001966183300027708Freshwater LakeMNEVIAEALAPFRPLTYTEHYYIELGYQHELGKANEHEYRRAQAEGQQARRLLNRGAMEAMMR
Ga0209297_100243533300027733Freshwater LakeMTHPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKRAQAEGQEARRLLNRGALEAMQRAY
Ga0209297_121767323300027733Freshwater LakeMNPVIAEALAPFRPLTYTEHYYIDLGYRHEQGKANEHEYKRAQAEGPEARRLMNRGALEAMTRSY
Ga0209087_102345433300027734Freshwater LakeMTHPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKRAQAEGQEARRLLNRGAMEAMSRWCY
Ga0209087_103342683300027734Freshwater LakeMNQTIAEALAPFRPLTYTEHYYIDLGYRHEQGKASEYEYKQAQAEGQEARRLLNRGAMEALQRRY
Ga0209087_129993623300027734Freshwater LakeMTHPVIAEALAPFRPLTYTEHYYVDLGYRHELGKISEHEYKTAMAEGPEARRLIYRGAMEAMTR
Ga0209190_1008033163300027736Freshwater LakeMNQTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEHEYKRAQAEGADACRLLNRGAMEAMMR
Ga0209190_102111423300027736Freshwater LakeMNQTIAEALAPFRPLTYTDHYYVDLGYRHELGKAEDYEFKAAQAEGAEARRLLNRGAMEAMMR
Ga0209088_1001192523300027763Freshwater LakeMNEVIAEALAPFRPLTYTEHYYIELGYQHELGKANEHEYKRAQAEGQQARRLLNRGAMEAMMR
Ga0209088_1002300293300027763Freshwater LakeMNQVIAEALAPFRPLTYTEHYYVELGYQHERGKANEHEYKRAQAEGQEARRLLNRGAMEAMMR
Ga0209088_1021619813300027763Freshwater LakeMNEVIAEALAPFRPLTYAEHYYIELGYQHELGKANEHEYKRAQAEGQQARRLLNRG
Ga0209500_1014048013300027782Freshwater LakeMTHPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKRAQAEGQEARRLLNRGAMEAM
Ga0209229_1001500823300027805Freshwater And SedimentMNPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY
Ga0209253_1068143923300027900Freshwater Lake SedimentHGSMYFDRGTEMNPTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY
Ga0209401_100226333300027971Freshwater LakeMNPVIQEALAPFRPLTYTEHYYVDLGYRYELGKAEDYEYKQAQAEGAQARRLLNRGAMEAMMR
Ga0209298_1010333723300027973Freshwater LakeMNQTILEALAPFRPLTYTEHYYIDLGYRHELGKANEHEYRRAQAEGQQARRLLNRGAMEAMMR
Ga0247723_1000613103300028025Deep Subsurface SedimentMNQTIAEALAPFRPLTYTEHYYVDLGYRYELGKANEHEYKRAQAEGAEARRLLNRGAMEAMMRAY
Ga0247723_100563453300028025Deep Subsurface SedimentMNDIMREALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMTRAY
Ga0247723_100650533300028025Deep Subsurface SedimentMTHPTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKRAQAEGPQARRLLNRGALEAMTR
Ga0247723_104303853300028025Deep Subsurface SedimentMNPVIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMSRWCY
Ga0247723_104613523300028025Deep Subsurface SedimentVIPEALAPFRPLTYTEHYYVDLGYRHELGNAEEYEYKAAMAEGQEARRLMNRGALEAMSRWCY
Ga0247723_105384633300028025Deep Subsurface SedimentMNDTILYAISPFRPLTYTEHYYIDLGYRHELGKANEHEYKRAQAEGPQARRLLNRGALEAMSRWCY
Ga0315285_1008767623300031885SedimentMNPVIAEALAPFRPLTYAEHYYVDLGYRHEQGKAPEYEYKQAYEEGQEARRLMNRGAMEALQRRY
Ga0334981_0114682_591_7913300033980FreshwaterMNQTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKAAMAEGQEARRLINRGALEAMSRWCY
Ga0334982_0115464_539_7393300033981FreshwaterMTHPVIAQALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGPEARRLLNRGALEAMTRSY
Ga0334982_0122877_771_9623300033981FreshwaterMNPVMQEALAPFRPLTYTDHYYVDLGYRHELGKAEDYEYKRAYGEGPEARRLLNRGAMEAMMR
Ga0334992_0052174_391_5913300033992FreshwaterMTHPVIAEALAPFRPLTYAEHYYIDLGYQHELGKANEHEYKRAQAEGQEARRLLNRGALEAMTRSY
Ga0334996_0118928_652_8433300033994FreshwaterMNQTIAEALAPFRPLTYTEHYYIDLGYRHELGKANQHEYKRAQAEGPEARRLLNRGAMEAMTR
Ga0334986_0007834_2607_28343300034012FreshwaterMYFDGGAEMTHPVIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKAAMAEGQEARRLMNRGALEAMSRWCY
Ga0334986_0011191_820_10203300034012FreshwaterMTHPVIAEALAPFRPLTYTEHYYIELGYKHEQGKADDHEYKRAYGEGQEARRLLNRGAMEALQRRY
Ga0335002_0200895_103_3063300034020FreshwaterMTHPVIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKAAMAEGQEARRLMNRGALEAMSRWCY
Ga0334987_0767816_70_2673300034061FreshwaterMNDTILYAISPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAMAEGPQARRLLNRGAMEAMTRSY
Ga0334995_0139063_1418_16093300034062FreshwaterMNPTLAEALAPFRPLTYTEHYYVDLGYRYELGKAEDYEYKQAMAEGAEARRLLSRGAMEAMMR
Ga0335000_0033587_796_10173300034063FreshwaterMYSDGGVEMNPTIAEALAPFRPLTYTEHYYVDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY
Ga0335027_0007884_6502_66993300034101FreshwaterMNQTIAEALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGPEARRLMNRGALEAMQRAY
Ga0335027_0021224_29_2503300034101FreshwaterMYFDGGTEMNPTIAEALAPFRPLTYTEHYYIDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY
Ga0335027_0056331_1343_15433300034101FreshwaterMTHSVITEALAPFRPLTYTEHYYVDLGYRHERGKAEEYEYKAAMAEGPEARRLLNRGALEAMQKAY
Ga0335036_0639978_152_3433300034106FreshwaterMNQTIAEALAPFRPLTYTEHYYVDLGYRYELGKAEDYEYKRAQAEGAQARRLLNRGAMEAMMR
Ga0335066_0565090_3_1913300034112FreshwaterMTHPVIAEALAPFRPLTYAEHYYIDLGYQHELGKANEHEYKRAQAEGQEARRLLNRGALEAMT
Ga0335065_0651650_442_6063300034200FreshwaterMNQTIAEALAPFRPLTYTEHYYVDLGYRYELGKAEDYEYKRAQAEGAQARRLLNR
Ga0335007_0055432_906_11033300034283FreshwaterMNQTIAEALAPFRPLTYTEHYYIDLGYRHEQGKAEEYEYKAAMAEGAQARRLLNRGAMEAMTRSY
Ga0335048_0328237_420_6203300034356FreshwaterMTHPVIAEALAPFRPLTYAEHYYVDLGYRHELGKAEEYEYKQAHAEGPEARRLMNRGALEAMQRAY


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