Metagenome / Metatranscriptome Family F099096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099096
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	89 residues
Representative Sequence	MSGTFTSLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL
Number of Associated Samples	83
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.37 %
% of genes near scaffold ends (potentially truncated)	24.27 %
% of genes from short scaffolds (< 2000 bps)	85.44 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.563 % of family members)
Environment Ontology (ENVO)	Unclassified (26.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.718 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.95% β-sheet: 0.00% Coil/Unstructured: 33.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04151	PPC	5.83
PF00578	AhpC-TSA	5.83
PF00441	Acyl-CoA_dh_1	4.85
PF02770	Acyl-CoA_dh_M	4.85
PF02771	Acyl-CoA_dh_N	1.94
PF00118	Cpn60_TCP1	1.94
PF00069	Pkinase	1.94
PF01925	TauE	0.97
PF02803	Thiolase_C	0.97
PF00072	Response_reg	0.97
PF16661	Lactamase_B_6	0.97
PF00291	PALP	0.97
PF05193	Peptidase_M16_C	0.97
PF00378	ECH_1	0.97
PF12681	Glyoxalase_2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	11.65
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.77
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.97
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.82 %
Unclassified	root	N/A	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.88 %
Unclassified	root	N/A	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.88 %
Unclassified	root	N/A	1.94 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.88 %
Unclassified	root	N/A	1.94 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.88 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Unclassified	root	N/A	1.94 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.97 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.88 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Unclassified	root	N/A	1.94 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.97 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.88 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Unclassified	root	N/A	1.94 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.97 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104932611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	907	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105217453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300000789\|JGI1027J11758_12114716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300003321\|soilH1_10216278	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300003992\|Ga0055470_10214670	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300004463\|Ga0063356_103028089	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300004463\|Ga0063356_103038184	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300004479\|Ga0062595_101481176	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300004643\|Ga0062591_102023063	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300005166\|Ga0066674_10017685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3043	Open in IMG/M
3300005174\|Ga0066680_10194596	All Organisms → cellular organisms → Bacteria → Acidobacteria	1280	Open in IMG/M
3300005332\|Ga0066388_102148519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1006	Open in IMG/M
3300005332\|Ga0066388_102198285	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005332\|Ga0066388_102311906	All Organisms → cellular organisms → Bacteria → Acidobacteria	973	Open in IMG/M
3300005332\|Ga0066388_102872701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	880	Open in IMG/M
3300005446\|Ga0066686_10729903	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005446\|Ga0066686_10846662	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300005447\|Ga0066689_10311331	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300005546\|Ga0070696_101516809	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300005549\|Ga0070704_102265000	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005553\|Ga0066695_10597136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	663	Open in IMG/M
3300005558\|Ga0066698_10326439	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300005598\|Ga0066706_10063758	All Organisms → cellular organisms → Bacteria → Acidobacteria	2550	Open in IMG/M
3300005764\|Ga0066903_105291999	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006049\|Ga0075417_10245034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	858	Open in IMG/M
3300006059\|Ga0075017_101675752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	502	Open in IMG/M
3300006755\|Ga0079222_10901049	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300006796\|Ga0066665_10028970	All Organisms → cellular organisms → Bacteria	3603	Open in IMG/M
3300006797\|Ga0066659_11080360	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006844\|Ga0075428_102481021	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300006845\|Ga0075421_101317581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	799	Open in IMG/M
3300006846\|Ga0075430_100037851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4089	Open in IMG/M
3300006852\|Ga0075433_11132239	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300006852\|Ga0075433_11616766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	559	Open in IMG/M
3300006871\|Ga0075434_101733396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	632	Open in IMG/M
3300007076\|Ga0075435_101412373	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300009012\|Ga0066710_100044510	All Organisms → cellular organisms → Bacteria	5405	Open in IMG/M
3300009012\|Ga0066710_100586416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1690	Open in IMG/M
3300009012\|Ga0066710_104281991	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009090\|Ga0099827_11671582	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300009094\|Ga0111539_11379441	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300009137\|Ga0066709_101960767	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300009147\|Ga0114129_10646422	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300009147\|Ga0114129_11052948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300009156\|Ga0111538_10492174	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300009609\|Ga0105347_1040404	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300009792\|Ga0126374_11030739	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300009804\|Ga0105063_1089250	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300010304\|Ga0134088_10460992	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300010362\|Ga0126377_11062474	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300010362\|Ga0126377_11597172	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300010391\|Ga0136847_12945522	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300010398\|Ga0126383_11754573	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300011417\|Ga0137326_1125356	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300012122\|Ga0137332_1010795	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300012199\|Ga0137383_10604519	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300012206\|Ga0137380_10000235	All Organisms → cellular organisms → Bacteria	37058	Open in IMG/M
3300012206\|Ga0137380_10917307	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300012207\|Ga0137381_10001341	All Organisms → cellular organisms → Bacteria	16489	Open in IMG/M
3300012212\|Ga0150985_106257753	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300012212\|Ga0150985_107807407	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300012212\|Ga0150985_119202036	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300012212\|Ga0150985_120376348	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300012212\|Ga0150985_123042345	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300012351\|Ga0137386_10075663	All Organisms → cellular organisms → Bacteria → Acidobacteria	2354	Open in IMG/M
3300012356\|Ga0137371_11444605	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300012359\|Ga0137385_10028737	All Organisms → cellular organisms → Bacteria	4980	Open in IMG/M
3300012359\|Ga0137385_11499280	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300012469\|Ga0150984_120979998	All Organisms → cellular organisms → Bacteria → Acidobacteria	1566	Open in IMG/M
3300012685\|Ga0137397_10000042	All Organisms → cellular organisms → Bacteria	74460	Open in IMG/M
3300012971\|Ga0126369_11072588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	894	Open in IMG/M
3300015052\|Ga0137411_1133658	All Organisms → cellular organisms → Bacteria → Acidobacteria	3081	Open in IMG/M
3300015054\|Ga0137420_1498109	All Organisms → cellular organisms → Bacteria → Acidobacteria	1953	Open in IMG/M
3300015371\|Ga0132258_10551411	All Organisms → cellular organisms → Bacteria → Acidobacteria	2889	Open in IMG/M
3300015371\|Ga0132258_13153467	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300015371\|Ga0132258_13156330	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300015372\|Ga0132256_101527011	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300015374\|Ga0132255_102747411	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300018077\|Ga0184633_10175997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300018431\|Ga0066655_10086823	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300018433\|Ga0066667_10940031	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300018468\|Ga0066662_11061198	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300019249\|Ga0184648_1233848	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300019257\|Ga0180115_1226595	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300019360\|Ga0187894_10404280	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300019789\|Ga0137408_1008891	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300021560\|Ga0126371_11538148	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300025923\|Ga0207681_11555228	Not Available	554	Open in IMG/M
3300025925\|Ga0207650_11717058	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300026296\|Ga0209235_1217166	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300026313\|Ga0209761_1272578	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300026327\|Ga0209266_1120206	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300026548\|Ga0209161_10151544	All Organisms → cellular organisms → Bacteria → Acidobacteria	1338	Open in IMG/M
3300027513\|Ga0208685_1026784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300027909\|Ga0209382_10018103	All Organisms → cellular organisms → Bacteria	8575	Open in IMG/M
3300027909\|Ga0209382_10235111	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300031093\|Ga0308197_10455560	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300031231\|Ga0170824_125774696	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300031965\|Ga0326597_10343448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1681	Open in IMG/M
3300034643\|Ga0370545_134945	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300034660\|Ga0314781_125496	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300034661\|Ga0314782_168810	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.84%
Host-Associated	Host-Associated	28.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.17%
Plants	Host-Associated → Plants	28.16%
Aquatic	Environmental → Aquatic	10.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.68%
Sediment	Environmental → Aquatic → Sediment	5.83%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Marine	Environmental → Aquatic → Marine	0.97%
Cave	Environmental → Terrestrial → Cave	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.74%
Loam	Environmental → Terrestrial → Soil → Loam	6.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Sand	Environmental → Terrestrial → Soil → Sand	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.97%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.97%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.97%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.97%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012122	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049326111	3300000364	Soil	MSGTFTTLLIMESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQLSRYIRVIGVAWSVLLVVIFGVFVVQGLNLM*
INPhiseqgaiiFebDRAFT_1052174532	3300000364	Soil	MNGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHIILDNAESHLARDQDAIRRKTTVLSKYIKLVSVAWGVLAVVIFGLWIIEGLKLV*
JGI1027J11758_121147161	3300000789	Soil	MXGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHIILDNAESHLARDQDAIRRKTTVLSKYIKLVSVAWGVLAVVIFGLWIIEGLKLV*
soilH1_102162782	3300003321	Sugarcane Root And Bulk Soil	MSGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHIILDNAESHLAREQDAIRRKTTVLSKYIKVVSVAWGVLAVVIFGLWVVQGLKLV*
Ga0055470_102146701	3300003992	Natural And Restored Wetlands	MSGTLSPLFVVELLLTASVVLMFLYRGMLDMKEEDHIVLDSAESHLVRDQATIRHKVIALSKYIRGVGVVWAILAVVIFGLWIVQGLNLV*
Ga0063356_1030280892	3300004463	Arabidopsis Thaliana Rhizosphere	MSGAFSGLLVVEIILTAAAVLLFLYRSMLDMKEEDHIILDSAESHLVRDQDAIRRKATALSKYIKLVGVTWGVLAVVIFGLWVVQGLKLV*
Ga0063356_1030381842	3300004463	Arabidopsis Thaliana Rhizosphere	MSGTFTSLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAETHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL*
Ga0062595_1014811762	3300004479	Soil	MSGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHIILDNAESHLVREQDAIRRKTTVLSKYIKLVSVAWGVLAVVIFGLWVVEGLKLV*
Ga0062591_1020230631	3300004643	Soil	MSGTFTSLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGL
Ga0066674_100176852	3300005166	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRGMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0066680_101945962	3300005174	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0066388_1021485191	3300005332	Tropical Forest Soil	MEVLMSGAFSGLLVVEVVLTAAAVLMFLYRSLLDMKEEDHIILDNAESHLARDQDAIRRKTTVLSKYIKFVSVAWGVLAVVIFGLWVIEGLKLV*
Ga0066388_1021982852	3300005332	Tropical Forest Soil	MSGALTVLFVVEVVLTAAAVLMFLYRGMLDMKEEDHIILDNAESHLAREQDGIRRKVTTLSKYIKGVSVVWAVLAVVLFGLWVAEGLKLI*
Ga0066388_1023119061	3300005332	Tropical Forest Soil	MNGAFSGLLAVEVVLTAAAVLMVLYRTMLDMKEEDHIILDSAESHLAREQDAIRRKTTILSKYIKVVSVAWGVLAVVIFGLWVVEGLKLV*
Ga0066388_1028727012	3300005332	Tropical Forest Soil	MSGTLTSLLVLETLLTAAAVVMFLYRGMLDMKEEDHIILDDAESHLAREQTYIRRRVTVLSKYMRIVFAAWGVLLVAIVGIWVAQGLNLI*
Ga0066686_107299031	3300005446	Soil	MSGAFSGLLVVEVVLTAVAVLMFLYRSMLDMKEEDHIILDSAESHLARDQDAIRRKTTVLSKYIKVVSVAWGVLAVVIFGLWVIQGLKLV*
Ga0066686_108466621	3300005446	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRGLLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0066689_103113312	3300005447	Soil	MNGTLLSLLIVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFSVWVAQGLNLL*
Ga0070696_1015168092	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSGTFTSLVIVESVLTAAVILMVVYRSMLDMKEEDHLILDDAESHLAREQKTIRSKATTLGRYLKVIGVAWGVLAVVIFGLWVVEGLNLI*
Ga0070704_1022650002	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSGTFTSLLILESVLTAAAVLMFLYRGMLDMKEEDHIILDEAENHLAREQAHIRQQVTAVTKYIKVVGVAWSVLLVVIFSVWVVRGLNLL*
Ga0066695_105971361	3300005553	Soil	MEGTFTSLLIVETVLTAAVVGMFLYRGMLDLKEEDQLILDDAESHLARDQATIRHKVNILSKYIKLIGVAWGILAVAIFSLWVVQGLRLI*
Ga0066698_103264392	3300005558	Soil	MGGTFTSLLIIVETVLTSAAVVMFLYRGMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVA
Ga0066706_100637582	3300005598	Soil	MGRTFTSLLIIVGTVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0066903_1052919991	3300005764	Tropical Forest Soil	MSGAFSGLLVVEIVLTAAAILMFLYRSMLDMKEEDHIILDNAESHLARDQAAIRRKTTVVSKYIRFVSVAWGVLAVVIFGLWVVEGLKLV*
Ga0075417_102450341	3300006049	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQVSRYIRVVGVAWSILLVVIFGVFVVQGLDLL*
Ga0075017_1016757521	3300006059	Watersheds	MSGTYTSLMILEGILTAAAALMFLYRSMLDMREEDHVILDQAESHLAREQASIRQRVTVVSKYLKVVSIVWAVLLVVIVCLWVAHG
Ga0079222_109010492	3300006755	Agricultural Soil	MSGAFSGLLVVEVVLTAAAVLMFLYRSVLDMKEEDHIILDNAESHLARGQDAIRRKTTVLSRYIKLVSVAWGVLAVVIFGLWVIEGLKLV*
Ga0066665_100289701	3300006796	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRGMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWV
Ga0066659_110803601	3300006797	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILSLWVAQGLRLL*
Ga0075428_1024810211	3300006844	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLLFLYRGILDMKEEDHLILDDAESHLAREQAAIRYKVTQLSKYIRVVGVAWSVLLVVIFGVFVVR
Ga0075421_1013175812	3300006845	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLLFLYRGILDMKEEDHLILDDAESHLAREQAAIRYKVTQLSKYIRVVGVAWSVLL
Ga0075430_1000378513	3300006846	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLMFLYRGMLDMKEEDHVILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL*
Ga0075433_111322391	3300006852	Populus Rhizosphere	VVESILTAAAVVMFLYRGMLDLKEEDHIILNDAESHLAREQQTVRTRLTLLSKFLKVVGVAWSVLAVAIFGVWVATGLNLM*
Ga0075433_116167661	3300006852	Populus Rhizosphere	MSGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHIILDNAESHLAREQDSIRRKTTVLSKYIKLVSVAWGVLAVVIFGLWVVEGLKLV*
Ga0075434_1017333961	3300006871	Populus Rhizosphere	LREVHMNVTLTSLLVVESILTAAAVVMFLYRGMLDLKEEDHIILNDAESHLAREQQTVRTRLTLLSKFLKVVGVAWSVLAVAIFGVWVATGLNLM*
Ga0075435_1014123732	3300007076	Populus Rhizosphere	MNGTFTSLLILESVVTAAAVVMFLYRGMLDMREEDHVILDDAENHLAREQASIRQKVTTVSRYIKVLGVTWSVLLVVIFGVWLVKGLNLL*
Ga0066710_1000445102	3300009012	Grasslands Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL
Ga0066710_1005864162	3300009012	Grasslands Soil	MGGTFTSLLIVESVLTAVVVVMFLYRGMLDMKEEDQLILNDAESHLARDQATIRHKVTILSKYLKLIGVAWSILAVAILGLWIAQGLRLI
Ga0066710_1042819912	3300009012	Grasslands Soil	MDGTFTSLLIVETVLTAAVIGMFLYRGMLDLKEEDQLILDDAESHLAREQATIRHKVTRLSKYIKLIGVAWGILAVA
Ga0099827_116715822	3300009090	Vadose Zone Soil	MNGTLLSLLMVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSV
Ga0111539_113794411	3300009094	Populus Rhizosphere	MSGTFTSFLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL*
Ga0066709_1019607671	3300009137	Grasslands Soil	TFTSLLIVETVLTAAVIGMFLYRGMLDLKEEDQLILDDAESHLAREQATIRHKVTRLSKYIKLIGVAWGILAVAIFSLWVVQGLRLI*
Ga0114129_106464222	3300009147	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLMFLYRGMLDMKGEDHVILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL*
Ga0114129_110529481	3300009147	Populus Rhizosphere	MEVHMNGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHVILDNAESHLAREQDAIRRKTTVLSKYIKLVSVAWGVLAVVIFGLWIIEGLKLV*
Ga0111538_104921742	3300009156	Populus Rhizosphere	MSGTFTSLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL*
Ga0105347_10404042	3300009609	Soil	MSGTLTSLLIVESVLTAAAVVMFLYRGLLDMKEEDHLILDDAELHLAREQAEIRQKATQMSKYIKVVGAAWSVLLVVILGVWVVQGLNLL*
Ga0126374_110307392	3300009792	Tropical Forest Soil	MEVLMSGAFSGLLVVEVVLTAAAVLMFLYRSMLDMKEEDHIILDNAESHLARDQDAIRRKTTVLSKYIKFVSVAWGVLAVVIFGLWVIEGLKLV*
Ga0105063_10892501	3300009804	Groundwater Sand	KLCGLLPEVHMSSTLLSLLIVESVLTAAAVVMFLYRGMLDLKEEDHIILNDAESHLAREQQSIRNRLAILSKYLKVVGVAWSVLAVAIFSMWIAVGLDLL*
Ga0134088_104609922	3300010304	Grasslands Soil	MNGTLLSLLMVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFGVWVAQGLNLL*
Ga0126377_110624741	3300010362	Tropical Forest Soil	MEVRMSGAFSGLLVVEVVLSVAAVLMFLYRGMLDMKEEDHIIIDNAESHLVREQDAIRRKTTVLSRYIKAVSVTWGVLAVLIFGLWIIQGLKLV*
Ga0126377_115971722	3300010362	Tropical Forest Soil	MNGTFTSLLIVESVLTAAAVVMFLYRGMLDMKEEDHIILDDAESHLAREQDTIRQKVTMLSKYLRFVGVAWCVLAVVILGIWVVQGLSLI*
Ga0136847_129455222	3300010391	Freshwater Sediment	MNLLMVESVVTAAAVLMFLYRGVLDMKEEDHIVLDDAESHLSREQAAIRRKVTSVTRYIRVVSVAWGLLAVVLVSLWVAEGLNLV*
Ga0126383_117545731	3300010398	Tropical Forest Soil	MSGTFTTLLVLESVLTAAAVVMFLYRGMLDMKEEDHIILDDAESHLAREQAHIRQRVTVLSRYMRMVFVAWGVLLVTIVGVWVAQGLNLI*
Ga0127502_105375562	3300011333	Soil	MNGAFTSLLIVEVVLTACAVTMFLWRGFLDMKEEDRLALDDAGSHLAREQAAIRQRVTSLSRYIKVVSVVWGVLAVVIFGMWVAQGLQLV*
Ga0137326_11253562	3300011417	Soil	MSGTLTSLLIVESVLTAAAVVMFLYRGLLDMKEEDHLILDDAELHLAREQAEIRQKATQMSKYIKVVGAAWSVLLVVILGVWVV*
Ga0137332_10107952	3300012122	Soil	MSGTLTSLLIVESVLTAAAVVMFLYRGLLDMKEEDHLILDDAELHLAREQAEIRQKATQMSKYIKVVGAAWSVLLVVILGVWAVQGLNLV*
Ga0137383_106045192	3300012199	Vadose Zone Soil	MGGTFTSLLMIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAEAHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0137380_1000023516	3300012206	Vadose Zone Soil	MIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAEAHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0137380_109173072	3300012206	Vadose Zone Soil	DSQREVRMGGTFTSLLIVESLLTATAIVMFLYRGMLDLKEEDHLILDDAESHLAREQETIRHKVTVLSRYLKLIGVAWGVLAVALLGLWIVEGLKLI*
Ga0137381_1000134115	3300012207	Vadose Zone Soil	MIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0150985_1062577532	3300012212	Avena Fatua Rhizosphere	MNGTFSSLLVFEGVLTAIAAAMFIYRAMLDMKEEDHIILDMAESHLAREQESIRHKVTIVSKYILVVGVAWSVLLVTIFGVWVVQGLNLI*
Ga0150985_1078074071	3300012212	Avena Fatua Rhizosphere	TQDAILTEVKMNGAFTSLLIIEVVLTAAAIAMFLWRGILDMKEEDHLMLDQAESHLAREQAGIRDRVTVLSKYIKVVTVVWGVLAVLILGMWVVQGLKLI*
Ga0150985_1192020361	3300012212	Avena Fatua Rhizosphere	MNGALMSLLMIESVLTAAAVIMLLYRAMLDMKEEDHVLLDPAEEHLDRHQVSIRHRVTTVSRYIKVVGVAWGVMLVVIMGVWVVRGLALI*
Ga0150985_1203763481	3300012212	Avena Fatua Rhizosphere	MNGTFTSLLFLEGILTAFAAVMFVYRAMLDMKEEDHIILDAAESHLAREQASIRHKVTVISKYIKVIGVAWSVLLVVIFSVWVVQGLNLV*
Ga0150985_1230423451	3300012212	Avena Fatua Rhizosphere	MNGTFTSLLILESVLTAAAVAMFLYRGMLDMKEEDHIMLDDAENHLAREQASIRQKVTMVTRYIKVVGVAWSAVLVGIFGVWLVRGLNLM*
Ga0137386_100756632	3300012351	Vadose Zone Soil	MGGTFTSLLMIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0137371_114446051	3300012356	Vadose Zone Soil	TVLTAAAVVMFLYRSMLDMKEEDQLILDDAEAHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL*
Ga0137385_100287371	3300012359	Vadose Zone Soil	MIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAEAHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVA
Ga0137385_114992802	3300012359	Vadose Zone Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRSMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVA
Ga0150984_1209799982	3300012469	Avena Fatua Rhizosphere	MNGTFTSLLVLESVLTAAAVAMFLYRGMLDMKEEDHIMLDDAENHLAREQASIRQKVTMVTRYIKVVGVAWSAVLVGIFGVWLVRGLNLM*
Ga0137397_1000004255	3300012685	Vadose Zone Soil	MNGTLLSLLIVESVLTAIVVVMFLYRGMLDLKEEDHVILNDAESHLAREQKTIRHKLAILSRYLKVAGVAWSVLAVAIFGVWVAQGLNLL*
Ga0126369_110725881	3300012971	Tropical Forest Soil	MEVHMSGAFSGLLVVEIVLTAAAILMFLYRSMLDMKEEDHIILDNAESHLARDQAAIRRKTTVVSKYIRFVSVAWGVLAVVIFGLWVVEGLKLV*
Ga0137411_11336583	3300015052	Vadose Zone Soil	MNGTLLSLLIVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFSVWVAQGLNL
Ga0137420_14981093	3300015054	Vadose Zone Soil	MSGTFSGLLVVESILTVAAIVMFAYRAMLDMKEEDHIILDAAESHLAREQASIRQRITMVSRYIKVVGVVWSVLLVVLFSVWVVQGLNLI*
Ga0132258_105514113	3300015371	Arabidopsis Rhizosphere	MSGTFTSLVIVESVLTAAAILMVVYRSMLDMKEEDHLILDDAESHLAREQKTIRSKATTLGRYLKVIGVAWGVLAVVIFGLWIVEGLNLI*
Ga0132258_131534672	3300015371	Arabidopsis Rhizosphere	LTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQLSRYIRVIGVAWSVLLVVIFGVFVVQGLNLM*
Ga0132258_131563301	3300015371	Arabidopsis Rhizosphere	MNGAFSGLLVVEVVLTAAAVLMVLYRSMLDMKEEDHIILDNAESHLAREQDAIRRKTTVLSKYIKLVSLAWGVLAVVIFGLWVVEGLKLV*
Ga0132256_1015270111	3300015372	Arabidopsis Rhizosphere	MSGSFTSLVIVESVLTAAAILMVVYRSMLDMKEEDHLILDDAESHLSTEPKTIRCKATTLARYLKVIGVAWGVLAVVIFGLWIVEGLNLI*
Ga0132255_1027474112	3300015374	Arabidopsis Rhizosphere	MSGTFTSLVIVESVLTAAAILMVVYRSMLDMKEEDHLILDDAESHLAREQKTIRSKATTLGRYLKVIGVAWGVLAVVIFGLWVVEGLNLI*
Ga0184633_101759971	3300018077	Groundwater Sediment	VSETFMNLLMVESVVTAAAVLMFLYRATLDMKEEDHIVLDDAESHLSREQAAIRQKVTWLSKYIRVVSVAWCLLAVVLVSLWVAEGLNLV
Ga0066655_100868232	3300018431	Grasslands Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRGMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGAAWGILAVAIFSLWVVRGLRLI
Ga0066667_109400311	3300018433	Grasslands Soil	SGTFTSLLILESVLTAVAVVMFIYRGMLDMKEEDHLILDEAEAHLAREQVEIRHRVTALSKYIKVVGVAWSALLVVIIGVWVVHGLNLL
Ga0066662_110611981	3300018468	Grasslands Soil	MNGTLLSLLIVESVLTAAVVVMFLYRGMLDLTEEDLVIFNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFGVWVAQGLNLL
Ga0184648_12338481	3300019249	Groundwater Sediment	MSGTFSALFVVEVALTAAAFLMFLYRSMLDMKEEDHLILDNAELHLAREQETIRRKVTTLGKYIKVVSVVWSVLAVVIFGLWVVEGLRLI
Ga0180115_12265951	3300019257	Groundwater Sediment	MNGTFTSLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTMVSKYLKVVGVAWSLMLVVIFGVFVVQGLNLL
Ga0187894_104042802	3300019360	Microbial Mat On Rocks	MSGTFTSLLIVESVLTAAAVIMFLYRGMLDMKEEDHIILDDAERHLAREQAVIRRKVNQVSKYIKVVGVAWSVLLVVIFGVWVVRGLNLL
Ga0137408_10088911	3300019789	Vadose Zone Soil	MNGTLLSLLIVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFSVWVAQGLNLLAQGLNL
Ga0126371_115381482	3300021560	Tropical Forest Soil	MNGTFMSLLVVEAVLTTAAVLMFLYRGMLDLKEEDHLILDDAESHLAREQAHIRQRVTALTRYIRVVGVAWSLLLVVLIGVWVAQGLNLI
Ga0207681_115552282	3300025923	Switchgrass Rhizosphere	MNGAFMSLLMIESVLTAAAVIMLLYRAMLDMKEEDHIILDAAEQHLDRDQETIRHKVNTVSRYIKVVGVAWGVMLVVIMGVWVVRGLALI
Ga0207650_117170581	3300025925	Switchgrass Rhizosphere	MSGTFTSLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQISRYIRVVGVAWSILLVVIFGVFVVQGLDLL
Ga0209235_12171661	3300026296	Grasslands Soil	MNGTLLSLLMVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFGVWVAQGLNLL
Ga0209761_12725782	3300026313	Grasslands Soil	MNGTLLSLLIVESVLTAAVVVMFLYRGMLDLKEEDHVILNDAESHLAREQQTIRHRLKILTRYLKVAGVAWSVLAVAIFSVWVAQGLNLL
Ga0209266_11202061	3300026327	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRGMLDMKEEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL
Ga0209161_101515441	3300026548	Soil	MGGTFTSLLIIVETVLTAAAVVMFLYRSMLDMKDEDQLILDDAESHLAREQATIRHKVTILSKYIKFIGVAWGILAVAILGLWVARGLRLL
Ga0208685_10267842	3300027513	Soil	MSGTLTSLLIVESVLTAAAVVMFLYRGLLDMKEEDHLILDDAELHLAREQAEIRQKATQMSKYIKVVGAAWSVLLVVILGVWVVQGLNLL
Ga0209382_100181035	3300027909	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQVSRYIRVVGVAWSILLVVIFGVFVVQGLDLL
Ga0209382_102351112	3300027909	Populus Rhizosphere	MSGTFTTLLIVESVLTAAAVLLFLYRGILDMKEEDHLILDDAESHLAREQAAIRYKVTQLSKYIRVVGVAWSVLLVVIFGVFVVRGLDLM
Ga0308197_104555602	3300031093	Soil	MGPAFSSLLVLEIVLTAAAIVMFGYRGALDMKEEDHLILDDAEKHLARDQANIRYKVTILSRYIKFVGIAWAVLGVVLFGLWIVQGLSLI
Ga0170824_1257746961	3300031231	Forest Soil	MGGTFTGLLVLESVLTAIAVLMFLYRSVLDMKEEDHLILDDAENHLAREQAFIRQRVTVLSRYIQVVGAAWGVLLVALFGVWLIQGLNLM
Ga0326597_103434481	3300031965	Soil	MNGTITSLFIVESVLTAAAVVMFLYRGMLDMKEEDHIILDDAERHLVVEQDTIRSKVTALSRYLKVVGVAWSVLAVVLFGLWIV
Ga0370545_134945_19_303	3300034643	Soil	MEVHMSGTFSALFVVEVALTAAAFLMFLYRSMLDMKEEDHLILDNAELHLAREQETIRRKVTTLGKYIKVVSVVWSVLAVVIFGLWVVEGLRLI
Ga0314781_125496_64_336	3300034660	Soil	MSGTFTTLLIVESVLTAAAVLMFLYRGMLDMKEEDHLILDDAESHLAREQAAIRQKVTQLSRYIRVVGVAWSLLLVVIFGVFVVQGLNLM
Ga0314782_168810_19_270	3300034661	Soil	LLIVEVVLTACAVAMFLWRGFLDMKEEDHLALDDAGSHLAREQAAIRHRVISLSKYIKVVSVVWGLLAVVIFGMWVAQGLQLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences