Metagenome / Metatranscriptome Family F099090

Basic Information
Family ID	F099090
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	43 residues
Representative Sequence	MHTVLGLLAFIVFIAAVIGVAAGITWVVVRVSPAKKPDATPKT
Number of Associated Samples	86
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.79 %
% of genes near scaffold ends (potentially truncated)	14.56 %
% of genes from short scaffolds (< 2000 bps)	76.70 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (64.078 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil (14.563 % of family members)
Environment Ontology (ENVO)	Unclassified (20.388 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.340 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.25% β-sheet: 0.00% Coil/Unstructured: 57.75%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01262	AlaDh_PNT_C	39.81
PF05222	AlaDh_PNT_N	9.71
PF01676	Metalloenzyme	7.77
PF01546	Peptidase_M20	4.85
PF00293	NUDIX	2.91
PF02885	Glycos_trans_3N	0.97
PF00117	GATase	0.97
PF01728	FtsJ	0.97
PF07687	M20_dimer	0.97
PF01149	Fapy_DNA_glyco	0.97
PF13508	Acetyltransf_7	0.97
PF07831	PYNP_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0213	Thymidine phosphorylase	Nucleotide transport and metabolism [F]	0.97
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.97
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.97
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.08 %
Unclassified	root	N/A	35.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.08 %
Unclassified	root	N/A	35.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.08 %
Unclassified	root	N/A	35.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.36 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	5.83 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.91 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.91 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.92 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.91 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459007\|GJ61VE201BYYHZ	Not Available	530	Open in IMG/M
2170459019\|G14TP7Y02HS942	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
2189573001\|GZR05M101AMN2B	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	503	Open in IMG/M
3300004479\|Ga0062595_100415387	Not Available	971	Open in IMG/M
3300005167\|Ga0066672_10779622	Not Available	604	Open in IMG/M
3300005171\|Ga0066677_10168497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1210	Open in IMG/M
3300005171\|Ga0066677_10339673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	860	Open in IMG/M
3300005177\|Ga0066690_10172495	Not Available	1431	Open in IMG/M
3300005186\|Ga0066676_11029459	Not Available	546	Open in IMG/M
3300005434\|Ga0070709_10912700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	695	Open in IMG/M
3300005436\|Ga0070713_100043207	All Organisms → cellular organisms → Bacteria	3683	Open in IMG/M
3300005439\|Ga0070711_100943923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	738	Open in IMG/M
3300005445\|Ga0070708_101775672	Not Available	573	Open in IMG/M
3300005454\|Ga0066687_10009126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3752	Open in IMG/M
3300005468\|Ga0070707_100541023	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005471\|Ga0070698_100216629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1849	Open in IMG/M
3300005471\|Ga0070698_100429758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1255	Open in IMG/M
3300005529\|Ga0070741_10450148	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300005529\|Ga0070741_10706907	Not Available	888	Open in IMG/M
3300005529\|Ga0070741_11374805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	588	Open in IMG/M
3300005530\|Ga0070679_101645905	Not Available	590	Open in IMG/M
3300005533\|Ga0070734_10149243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1357	Open in IMG/M
3300005534\|Ga0070735_10157916	Not Available	1404	Open in IMG/M
3300005534\|Ga0070735_10550527	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005538\|Ga0070731_10340240	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300005538\|Ga0070731_10397031	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005542\|Ga0070732_10002976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9127	Open in IMG/M
3300005575\|Ga0066702_10028502	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300005575\|Ga0066702_10833492	Not Available	549	Open in IMG/M
3300006034\|Ga0066656_10538276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300006046\|Ga0066652_101533456	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006755\|Ga0079222_11227110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	675	Open in IMG/M
3300006796\|Ga0066665_11689524	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006800\|Ga0066660_10209559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1494	Open in IMG/M
3300006800\|Ga0066660_11394101	Not Available	549	Open in IMG/M
3300006806\|Ga0079220_10605614	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300006903\|Ga0075426_10931377	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009093\|Ga0105240_11236749	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300009137\|Ga0066709_103777204	Not Available	550	Open in IMG/M
3300009629\|Ga0116119_1060702	Not Available	969	Open in IMG/M
3300010140\|Ga0127456_1017922	Not Available	541	Open in IMG/M
3300010323\|Ga0134086_10174342	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010360\|Ga0126372_11528949	Not Available	704	Open in IMG/M
3300010373\|Ga0134128_11459883	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010379\|Ga0136449_100423243	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300010398\|Ga0126383_12141588	Not Available	646	Open in IMG/M
3300010866\|Ga0126344_1168341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2092	Open in IMG/M
3300010880\|Ga0126350_10154554	Not Available	550	Open in IMG/M
3300010880\|Ga0126350_12264539	Not Available	574	Open in IMG/M
3300012204\|Ga0137374_10197491	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300012212\|Ga0150985_101342280	Not Available	530	Open in IMG/M
3300012350\|Ga0137372_10036758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4445	Open in IMG/M
3300012923\|Ga0137359_10074659	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300015356\|Ga0134073_10084893	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300017927\|Ga0187824_10119946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300017930\|Ga0187825_10237415	Not Available	665	Open in IMG/M
3300017940\|Ga0187853_10226573	Not Available	866	Open in IMG/M
3300017961\|Ga0187778_10023776	All Organisms → cellular organisms → Bacteria	3746	Open in IMG/M
3300017966\|Ga0187776_10634935	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300018060\|Ga0187765_10136559	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300018060\|Ga0187765_11315650	Not Available	512	Open in IMG/M
3300018089\|Ga0187774_11097852	Not Available	563	Open in IMG/M
3300018468\|Ga0066662_10201701	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300019888\|Ga0193751_1002737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10607	Open in IMG/M
3300021170\|Ga0210400_10851793	Not Available	746	Open in IMG/M
3300021444\|Ga0213878_10253761	Not Available	748	Open in IMG/M
3300025548\|Ga0208716_1050828	Not Available	881	Open in IMG/M
3300025812\|Ga0208457_1023722	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300025910\|Ga0207684_11160432	Not Available	641	Open in IMG/M
3300025922\|Ga0207646_10070567	All Organisms → cellular organisms → Bacteria	3120	Open in IMG/M
3300026322\|Ga0209687_1266740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	534	Open in IMG/M
3300026324\|Ga0209470_1281148	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300026527\|Ga0209059_1040058	Not Available	2091	Open in IMG/M
3300027655\|Ga0209388_1226452	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027826\|Ga0209060_10312195	Not Available	717	Open in IMG/M
3300027842\|Ga0209580_10057529	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300027869\|Ga0209579_10008509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6486	Open in IMG/M
3300027869\|Ga0209579_10039811	All Organisms → cellular organisms → Bacteria	2532	Open in IMG/M
3300027869\|Ga0209579_10740274	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300027905\|Ga0209415_10640729	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300027986\|Ga0209168_10115283	Not Available	1379	Open in IMG/M
3300028563\|Ga0265319_1002767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9404	Open in IMG/M
3300028800\|Ga0265338_10034800	All Organisms → cellular organisms → Bacteria	4857	Open in IMG/M
3300031670\|Ga0307374_10002585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31918	Open in IMG/M
3300031715\|Ga0307476_10048297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2893	Open in IMG/M
3300031715\|Ga0307476_11219983	Not Available	550	Open in IMG/M
3300031753\|Ga0307477_10032525	All Organisms → cellular organisms → Bacteria	3571	Open in IMG/M
3300031754\|Ga0307475_10353000	Not Available	1181	Open in IMG/M
3300031754\|Ga0307475_10546695	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031962\|Ga0307479_11162959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	736	Open in IMG/M
3300031962\|Ga0307479_12073962	Not Available	517	Open in IMG/M
3300032008\|Ga0318562_10570732	Not Available	654	Open in IMG/M
3300032133\|Ga0316583_10060213	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300032205\|Ga0307472_102409087	Not Available	534	Open in IMG/M
3300032783\|Ga0335079_10369535	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300032828\|Ga0335080_10988115	Not Available	858	Open in IMG/M
3300032829\|Ga0335070_10030969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6084	Open in IMG/M
3300032892\|Ga0335081_10112358	All Organisms → cellular organisms → Bacteria	4012	Open in IMG/M
3300032892\|Ga0335081_10192940	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300032892\|Ga0335081_10891981	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300033233\|Ga0334722_10094075	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300033806\|Ga0314865_083447	Not Available	833	Open in IMG/M
3300033808\|Ga0314867_008440	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.20%
Host-Associated	Host-Associated	5.83%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.38%
Aquatic	Environmental → Aquatic	5.83%
Plants	Host-Associated → Plants	5.83%
Solid Waste	Engineered → Solid Waste	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.38%
Freshwater	Environmental → Aquatic → Freshwater	5.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Grass	Engineered → Solid Waste → Grass	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.62%
Loam	Environmental → Terrestrial → Soil → Loam	11.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Clay	Environmental → Terrestrial → Soil → Clay	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Composting	Engineered → Solid Waste → Grass → Composting	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	14.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032133	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L02_00381300	2170459007	Grass Soil	LVVSTVLGLIAFVVFIACIVGLAAGITWVVVRFTPTKKKPDPAPKT
4MG_04998600	2170459019	Switchgrass, Maize And Mischanthus Litter	MATALGLLAFVLYIAAVVAAAAGITWLVVRFSPSKKPDAESKT
FD2_07285230	2189573001	Grass Soil	LVVSTVLGLIAFVVFIACIVGLAAGITWVVVHFTPTKKKPDPAPKT
Ga0062595_1004153871	3300004479	Soil	MHTVLGLAAFVVFIAAVISVAAGITWVVVRVSPAKKPDAAPKS*
Ga0066672_107796221	3300005167	Soil	MHTVLGLAAFIVFIAAVISVAAGITWVVVRVSPAKKPDATP
Ga0066677_101684972	3300005171	Soil	MHTVLGLLAFIVFIAAVVGVAAGITWVVVRVSPAKKPDAAPKS*
Ga0066677_103396731	3300005171	Soil	LTTVLGLLAFVVFIVAIIATAAGVTWLVVRLSPPKKPDAAPNKS*
Ga0066690_101724953	3300005177	Soil	MHTVLGLLAFIVFIAAVIGVAAGITWVVVRVSPAKKPDATPKT*
Ga0066676_110294592	3300005186	Soil	MTTALGLLAFVVFIAFVVGTAAGVTWLVVRLSPSKKPSAESKT*
Ga0070709_109127002	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSTALGLLAFVVFIVAIIAVAAGVTWVVVRFSPSKKPDAPPPAA*
Ga0070713_1000432075	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHTVLGLAAFVVFIAAVISVAAGVTWVVVRVSPAKKPDAAPKS*
Ga0070711_1009439231	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LGLLAFVVFIVAIIAVAAGVTWVVVRFSPSKKPDAPPPAA*
Ga0070708_1017756722	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSTVLGLIAFVVFIACVIAAAAGITWVVVRFSPAKKPEPTPKT*
Ga0066687_100091264	3300005454	Soil	LTTVLGLLAFVVFIVAIIGTAAGVTWLVVRLSPPKKPDAAPNKS*
Ga0070707_1005410232	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSTVLGLIAFVVFIACVVAAAAGITWVVVRFSPSKKPETTPKS*
Ga0070698_1002166291	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SGYSRFAVSTVLGLIAFVVFIACVIAAAAGITWVVVRFSPAKKPETTPKT*
Ga0070698_1004297581	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSTVLGLIAFAVFIACVIAAAAGITWVVVRFSPAKKPETTPKT*
Ga0070741_104501482	3300005529	Surface Soil	MQNVLGLIEFAVFIVAIVAFAAGITWVVVRFSPSKKPDSPTA*
Ga0070741_107069071	3300005529	Surface Soil	MHTVLGLLAFIVFIAAVISVAAGITWVVVRVSPAKKPDAA
Ga0070741_113748052	3300005529	Surface Soil	MHTALGLLAFIVFIAAVIGVAAGITWVVVRVSPAKKPDATPKT*
Ga0070679_1016459052	3300005530	Corn Rhizosphere	VSNVLGLLGFLVYIAAIVGAAAGITWVVVRFSPTKKPPAES*
Ga0070734_101492432	3300005533	Surface Soil	MTTALGLLAFVGYILAVVAVAAGVTWVVVRLTPTKKPDAAPKS*
Ga0070735_101579162	3300005534	Surface Soil	MHNALGLLAFVVYIAAIVGVAAGITWVVVRLSPPKKADESKPA*
Ga0070735_105505272	3300005534	Surface Soil	MHDALGLLFFVIFCASIIGAAAGITWVVVRLAPPKKADPAPKT*
Ga0070731_103402402	3300005538	Surface Soil	VSNVLGLLAFVVFIAAIIGLAAGITWVVVRFSPKKKPSPPAPNA*
Ga0070731_103970312	3300005538	Surface Soil	MSTVLGLLAFVLFIVAVIGVAAGITWLVVRLFPIKKPDAAPKA*
Ga0070732_100029767	3300005542	Surface Soil	MSAVLGLLAFVLFIVAIIGAAAGITWVVVRLSPPQQKPGATPKA*
Ga0066702_100285022	3300005575	Soil	MHTVLGLAAFIVFIAAVISVAAGITWVVVRVSPAKKPDATPKT*
Ga0066702_108334922	3300005575	Soil	MHTVLGLLAFVVYIAAIVGAAAGITWVVVRLSPPKKADESKPA*
Ga0066656_105382762	3300006034	Soil	MHTVLGLIGFVLFIAAIVGAAAGITWVVVRLSPPKKADESKPA*
Ga0066652_1015334562	3300006046	Soil	MDTVLGLVVFVVYIALVISFAAGVTWVVVRFTPTKKPKTETPAEG*
Ga0079222_112271102	3300006755	Agricultural Soil	MHTVLGLAAFVVFIAAVISVAAGITWIVVRVSPAKKPDAAPKS*
Ga0066665_116895242	3300006796	Soil	MNTVLGLLAFVVFIAAVIAAAAGITWVVVRLSPAKKPDEAAKT*
Ga0066660_102095592	3300006800	Soil	MHTVLGLAAFIVFIAAVISVAAGITWVVVRVSPAKKPDATPET*
Ga0066660_113941012	3300006800	Soil	MHTVLGLIGFVLFIVAIVGAAAGITWVVVRLSPPKKADESKPA*
Ga0079220_106056142	3300006806	Agricultural Soil	VAWSYSRFAMHTVLGLAAFVVFIAAVISVAAGITWIVVRVSPAKKPDAAPKS*
Ga0075426_109313772	3300006903	Populus Rhizosphere	MSTVLGLLAFVVFIVAIIAVAAGVTWVVVRFSPSKKPDAPPPAA*
Ga0105240_112367492	3300009093	Corn Rhizosphere	MHTVLGLAAFVVFIAAVISVAAGITWVVVRVSPAKKPDATPKA*
Ga0066709_1037772041	3300009137	Grasslands Soil	TVLGLIAFVVFIAFVVAIAAGITWLVVRVSPAKKPDAAPKT*
Ga0116119_10607021	3300009629	Peatland	IAFVVFIAAVIAVAAAVTWVVVRLSPAKKSGPAKPSS*
Ga0127456_10179221	3300010140	Grasslands Soil	VLGLLAFIVFIAAVVGVAAGITWVVVRVSPAKKPDAAPKS*
Ga0134086_101743422	3300010323	Grasslands Soil	MTTALGLLAFVVFIAFVVGTAAGVTWLVVRLSPSKKPSAEGKT*
Ga0126372_115289492	3300010360	Tropical Forest Soil	MSNVLGLLLFVVFIAAVIGAAAAITWVVVRLSPLKGPQPEPPKT*
Ga0134128_114598832	3300010373	Terrestrial Soil	MNSVLGLLAFVLFCACVVGAAAGITWVVVRLSPPKKPDAAPKT*
Ga0136449_1004232433	3300010379	Peatlands Soil	MTTVLGLLAFVLFIACIIGAAAGITWVVVKVSPPKRPDAQPKGDG*
Ga0126383_121415882	3300010398	Tropical Forest Soil	MATFLGLLAFALYIILIISFAAAVTWVVVRFSPAKKPDAAPKT*
Ga0126344_11683411	3300010866	Boreal Forest Soil	MHTALGLVGFVVFIASVIGVAAGITWLVVRLAPPKKPDATPKT*
Ga0126350_101545542	3300010880	Boreal Forest Soil	MHTALGLVGFVVFIASVIGVAAGITWLVVRLVPPKKPDATPKT*
Ga0126350_122645392	3300010880	Boreal Forest Soil	VATGLGLVGVVVFIATVVALAAGITWLVVRLAPPKKPDATPKA*
Ga0137374_101974913	3300012204	Vadose Zone Soil	MSSVLGLVAFVVFIAAVVAAAAGITWVVVRVSPAKAPDQAPKT*
Ga0150985_1013422802	3300012212	Avena Fatua Rhizosphere	CSSDLNVLGLLAFVVFIAAIIALAAGITWSVVRLSPPKKQAPPADSA*
Ga0137372_100367582	3300012350	Vadose Zone Soil	MSTVLGLVAFVVFIAAVVAAAAGITWVVVRVSPAKAPDQAPKT*
Ga0137359_100746592	3300012923	Vadose Zone Soil	VSSVLGLIAFVVFIAAVIAAAAGITWLVVRISPAKKKPEAAKQE*
Ga0134073_100848932	3300015356	Grasslands Soil	MHTVLGLLAFVVFIAAVISAAAAITWLVVRLSPAKKPDAAPKS*
Ga0187824_101199462	3300017927	Freshwater Sediment	MQNVLGLIEFAVFIAAIVAFAAGITWVVVRFSPSKKPDAPTT
Ga0187825_102374152	3300017930	Freshwater Sediment	MQSALGLIEFAVFIAAIVSLAAGITWVVVRVSPAKKPNAPSA
Ga0187853_102265731	3300017940	Peatland	AFVAFIAVVITVAAAVTWLVVRLSPAKKPDAAKPS
Ga0187778_100237762	3300017961	Tropical Peatland	MTTVLGLLAFVVFIACVIATAAGITWIVVRFSPAKKPKASAP
Ga0187776_106349352	3300017966	Tropical Peatland	MTTALGLLAFLVFIAVVIATAAGVTWVVVRLSPAKKTKASTGS
Ga0187765_101365592	3300018060	Tropical Peatland	VSTALGLIAFVVFIVVVIATAAGVTWVVVRFSPAKKPKASAPS
Ga0187765_113156502	3300018060	Tropical Peatland	IGFALFIVCVIAAAAGITWLVVRLSPGKKPGAAPAPPKA
Ga0187774_110978522	3300018089	Tropical Peatland	VTTALGLIAFVFFIVVVIATAAGVTWVVVRFSPAKKPKASAPS
Ga0066662_102017012	3300018468	Grasslands Soil	MHTVLGLAAFIVFIAAVISVAAGITWVVVRVSPAKKPDATPET
Ga0193751_100273712	3300019888	Soil	MHTALGLVGFVVFIASVIGVAAGITWLVVRLAPPKKPDATPKT
Ga0210400_108517932	3300021170	Soil	VSTVLGLIAFVVFIACIVAAAAGITWVVVRFSPTKKPDAAPKT
Ga0213878_102537612	3300021444	Bulk Soil	TVLGLLAFVVFIAAIIGLAAALTWVVVRFSPSKKPDATAPKS
Ga0208716_10508282	3300025548	Arctic Peat Soil	MTTALGLLAFVVFIVAVIATAASVTWLVVRFSPAKKKPGAAPTP
Ga0208457_10237221	3300025812	Peatland	MTTALGLIAFVVFIAAVIAVAAAVTWVVVRLSPAKKSGPAK
Ga0207684_111604322	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSTVLGLIAFVVFIACVIAAAAGITWVVVRFSPAKKPEPTPKT
Ga0207646_100705672	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSTVLGLIAFVVFIACVVAAAAGITWVVVRFSPSKKPETTPKS
Ga0209687_12667402	3300026322	Soil	MHTVLGLLAFIVFIAAVVGVAAGITWVVVRVSPAKKPDAAPKS
Ga0209470_12811482	3300026324	Soil	MTTALGLLAFVVFIAFVVGTAAGVTWLVVRLSPSKKPSAESKT
Ga0209059_10400583	3300026527	Soil	MHTVLGLAAFIVFIAAVISVAAGITWVVVRVSPAKKPDATPKT
Ga0209388_12264521	3300027655	Vadose Zone Soil	LGFVVYIAAIIAAAAGVTWIVVRLSPAKKPDTTPPG
Ga0209060_103121952	3300027826	Surface Soil	MTTALGLLAFVGYILAVVAVAAGVTWVVVRLTPTKKPDAAPKS
Ga0209580_100575292	3300027842	Surface Soil	MSAVLGLLAFVLFIVAIIGAAAGITWVVVRLSPPQQKPGATPKA
Ga0209579_100085097	3300027869	Surface Soil	VSNVLGLLAFVVFIAAIIGLAAGITWVVVRFSPKKKPSPPAPNA
Ga0209579_100398111	3300027869	Surface Soil	MSTVLGLLAFVLFIVAVIGVAAGITWLVVRLFPIKKPDAAPKA
Ga0209579_107402742	3300027869	Surface Soil	MQDVLGLVFFVLFCSAVIGAAAGITWVVVRLAPPKKPDPAPKT
Ga0209415_106407292	3300027905	Peatlands Soil	MTTVLGLLAFVLFIACIIGAAAGITWVVVKVSPPKRPDAQPKGDG
Ga0209168_101152832	3300027986	Surface Soil	MHNALGLLAFVVYIAAIVGVAAGITWVVVRLSPPKKADESKPA
Ga0265319_10027672	3300028563	Rhizosphere	MTTALGLLAFIFFIVAVIATAAGITWVVVRFTPKKKPAAAKTES
Ga0265338_100348003	3300028800	Rhizosphere	MSSALGLLAFALYILAIIAAAAGITWVVVRFSPSKKPDAAEKS
Ga0307374_100025857	3300031670	Soil	MHTALGLVGFVVFIAAVIGVAAGITWLVVRLAPPKKPDATPKA
Ga0307476_100482972	3300031715	Hardwood Forest Soil	MQDAIGLVFFVLFCCAVIGAAAGITWVVVRLAPPKKPDPAPKT
Ga0307476_112199831	3300031715	Hardwood Forest Soil	AFVLFIVAVIGVAAGITWLVVRLFPIKKPDAAPKG
Ga0307477_100325252	3300031753	Hardwood Forest Soil	MSAVLGLLAFVLFIVAIIGAAAGITWVVVRLSPPQQKPDATPKA
Ga0307475_103530001	3300031754	Hardwood Forest Soil	MSTVLGLLAFLVFIVAIVGVAAGITWVVVRLSPSKKPEAPPPAA
Ga0307475_105466952	3300031754	Hardwood Forest Soil	MSTVLGLLAFVVFIVAIIGVAAGVTWVVVRFSPAKKPDAPPPAA
Ga0307479_111629592	3300031962	Hardwood Forest Soil	MGAVLGLLAFVLFIVAIIGAAAGITWVVVRLSPPQQKPDATPKA
Ga0307479_120739621	3300031962	Hardwood Forest Soil	LLAFVVFIVLVIALAAAVTWVVVRVSPSKKQPDAAPKT
Ga0318562_105707322	3300032008	Soil	MADVLGILLFAVFIVVIIAAAAGVTWVVVRVSPAKKPAEAPKA
Ga0316583_100602132	3300032133	Rhizosphere	MTTALGLLAFVLYIAVVIGAAAGITWVVVRYSPTKKPDATQKS
Ga0307472_1024090871	3300032205	Hardwood Forest Soil	LTTVLGLLAFVVFIVAIIGVAAGVTWLVVRLSPPKTPGATPNKT
Ga0335079_103695352	3300032783	Soil	VSTALGLIGFVVFIVVVIATAAGVTWVVVRFSPAKKPKASTPS
Ga0335080_109881152	3300032828	Soil	MGDVLGLLLFAVFIVVIIAMAAGITWVVVRLSPAKKPAETPQA
Ga0335070_100309697	3300032829	Soil	VSTVLGLLAFVVFIAAVIATAAGVTWVVVQLSPAKKPKTPAPS
Ga0335081_101123582	3300032892	Soil	MTTILGLLAFVLFIACVIGLAAGITWVVVRLSPAKKPDAA
Ga0335081_101929403	3300032892	Soil	MSNVLGLLAFVLFIVAIIGAAAGITWVVVRLSPPQPKPDATPKA
Ga0335081_108919812	3300032892	Soil	VSTALGLIGFVVFIVVVIATAAGVTWVVVRFSPAKKPKPSAHS
Ga0334722_100940753	3300033233	Sediment	VSDVFGLFFFVVFILCIVAAAAGITWVVVRVSPAKKPDATPKT
Ga0314865_083447_72_203	3300033806	Peatland	MSTALGLIAFVAFIVAVIAVAAGVTWVVVRVSPAKKSEPAKPS
Ga0314867_008440_2267_2398	3300033808	Peatland	MTTVLGLLAFVVFIGVVIATAAGVTWVVVRFSPAKKPKPSAPS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099090

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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