Metagenome Family F099085

Basic Information
Family ID	F099085
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	127 residues
Representative Sequence	QPLGGPIFDSNVIDLVVASLPLAPNFSTELPFFIYERGGRVPMQVAVRERANVDFPKLGNRDTWIVTVGVPGAPATIWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG
Number of Associated Samples	91
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.00 %
% of genes near scaffold ends (potentially truncated)	86.41 %
% of genes from short scaffolds (< 2000 bps)	88.35 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Most Common Taxonomy
Group	Bacteria (59.223 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (7.767 % of family members)
Environment Ontology (ENVO)	Unclassified (44.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.165 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.87% β-sheet: 43.48% Coil/Unstructured: 45.65%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
b.177.1.1: YmcC-like	d2in5a1	2in5	0.63
b.177.1.1: YmcC-like	d2in5a1	2in5	0.63
f.4.5.1: Autotransporter	d1uynx_	1uyn	0.6
f.4.5.1: Autotransporter	d1uynx_	1uyn	0.6
f.7.1.1: Lipovitellin-phosvitin complex; beta-sheet shell regions	d1lsha2	1lsh	0.58
f.7.1.1: Lipovitellin-phosvitin complex; beta-sheet shell regions	d1lsha2	1lsh	0.58
b.61.1.0: Avidin/streptavidin	d2y32a_	2y32	0.56
b.61.1.0: Avidin/streptavidin	d4bj8a_	4bj8	0.56
b.61.1.0: Avidin/streptavidin	d2y32a_	2y32	0.56
b.61.1.0: Avidin/streptavidin	d4bj8a_	4bj8	0.56

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00903	Glyoxalase	11.65
PF03965	Penicillinase_R	6.80
PF00484	Pro_CA	3.88
PF02687	FtsX	2.91
PF13426	PAS_9	1.94
PF12681	Glyoxalase_2	1.94
PF00069	Pkinase	1.94
PF13473	Cupredoxin_1	1.94
PF03358	FMN_red	0.97
PF12867	DinB_2	0.97
PF04545	Sigma70_r4	0.97
PF14026	DUF4242	0.97
PF12850	Metallophos_2	0.97
PF05569	Peptidase_M56	0.97
PF00933	Glyco_hydro_3	0.97
PF12704	MacB_PCD	0.97
PF14329	DUF4386	0.97
PF07687	M20_dimer	0.97
PF13420	Acetyltransf_4	0.97
PF03819	MazG	0.97
PF13279	4HBT_2	0.97
PF13620	CarboxypepD_reg	0.97
PF01575	MaoC_dehydratas	0.97
PF00892	EamA	0.97
PF13432	TPR_16	0.97
PF05635	23S_rRNA_IVP	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.77
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	6.80
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	6.80
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	3.88
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.22 %
Unclassified	root	N/A	40.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.22 %
Unclassified	root	N/A	40.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.22 %
Unclassified	root	N/A	40.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	14.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.83 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.97 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	3.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.94 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.97 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	3.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.94 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.97 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	3.88 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.94 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.97 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.97 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.78 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	3.88 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.94 %
Sphingomonas sp. UNC305MFCol5.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. UNC305MFCol5.2	0.97 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.97 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004025\|Ga0055433_10163796	Not Available	545	Open in IMG/M
3300005329\|Ga0070683_100781850	Not Available	915	Open in IMG/M
3300005337\|Ga0070682_100820277	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005339\|Ga0070660_101074378	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005343\|Ga0070687_100317832	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300005345\|Ga0070692_10717058	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005353\|Ga0070669_100543473	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005354\|Ga0070675_100321084	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300005354\|Ga0070675_101822376	Not Available	561	Open in IMG/M
3300005356\|Ga0070674_100019339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4325	Open in IMG/M
3300005364\|Ga0070673_100858290	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005441\|Ga0070700_100185580	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300005455\|Ga0070663_101668004	Not Available	569	Open in IMG/M
3300005456\|Ga0070678_100560397	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300005547\|Ga0070693_100505046	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300005549\|Ga0070704_101957780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. UNC305MFCol5.2	544	Open in IMG/M
3300005617\|Ga0068859_100358917	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300005895\|Ga0075277_1070414	Not Available	565	Open in IMG/M
3300006058\|Ga0075432_10419522	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006755\|Ga0079222_11449940	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300006854\|Ga0075425_100039320	All Organisms → cellular organisms → Bacteria → Proteobacteria	5278	Open in IMG/M
3300006854\|Ga0075425_101199558	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300006903\|Ga0075426_10094765	All Organisms → cellular organisms → Bacteria → Proteobacteria	2139	Open in IMG/M
3300006903\|Ga0075426_10469883	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300007076\|Ga0075435_100161642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1887	Open in IMG/M
3300009093\|Ga0105240_10424878	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300009098\|Ga0105245_10244561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1741	Open in IMG/M
3300009174\|Ga0105241_11201518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	718	Open in IMG/M
3300009176\|Ga0105242_10609442	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300010371\|Ga0134125_10447582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1432	Open in IMG/M
3300010373\|Ga0134128_10344513	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300010397\|Ga0134124_10331601	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300010401\|Ga0134121_10664112	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300011444\|Ga0137463_1067749	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300011444\|Ga0137463_1170091	Not Available	819	Open in IMG/M
3300012198\|Ga0137364_11411375	Not Available	515	Open in IMG/M
3300012202\|Ga0137363_11536435	Not Available	557	Open in IMG/M
3300012349\|Ga0137387_11067585	Not Available	576	Open in IMG/M
3300012349\|Ga0137387_11249790	Not Available	522	Open in IMG/M
3300012361\|Ga0137360_11406917	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012362\|Ga0137361_10024839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4637	Open in IMG/M
3300012910\|Ga0157308_10112368	Not Available	820	Open in IMG/M
3300012951\|Ga0164300_11055055	Not Available	527	Open in IMG/M
3300012971\|Ga0126369_12708529	Not Available	580	Open in IMG/M
3300012989\|Ga0164305_12013932	Not Available	527	Open in IMG/M
3300013296\|Ga0157374_10467008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1264	Open in IMG/M
3300013297\|Ga0157378_10556038	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300013307\|Ga0157372_12504883	Not Available	592	Open in IMG/M
3300013831\|Ga0120126_1004565	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300014300\|Ga0075321_1021617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	996	Open in IMG/M
3300014325\|Ga0163163_10171588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2216	Open in IMG/M
3300014968\|Ga0157379_10930708	Not Available	826	Open in IMG/M
3300014968\|Ga0157379_11636929	Not Available	629	Open in IMG/M
3300015087\|Ga0167637_1032142	Not Available	728	Open in IMG/M
3300015372\|Ga0132256_101577683	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300015374\|Ga0132255_100573469	Not Available	1666	Open in IMG/M
3300015374\|Ga0132255_102691954	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300017947\|Ga0187785_10745632	Not Available	517	Open in IMG/M
3300017966\|Ga0187776_10082295	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300018482\|Ga0066669_10833083	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300019877\|Ga0193722_1063396	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300019883\|Ga0193725_1035717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1312	Open in IMG/M
3300024181\|Ga0247693_1053307	Not Available	588	Open in IMG/M
3300025885\|Ga0207653_10018859	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300025912\|Ga0207707_10903052	Not Available	730	Open in IMG/M
3300025912\|Ga0207707_11128153	Not Available	638	Open in IMG/M
3300025922\|Ga0207646_11811992	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300025927\|Ga0207687_10802019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	803	Open in IMG/M
3300025937\|Ga0207669_10000747	All Organisms → cellular organisms → Bacteria	14066	Open in IMG/M
3300025938\|Ga0207704_10686664	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300025944\|Ga0207661_10774505	Not Available	883	Open in IMG/M
3300025944\|Ga0207661_11118161	Not Available	725	Open in IMG/M
3300025945\|Ga0207679_11092182	Not Available	732	Open in IMG/M
3300025949\|Ga0207667_10590603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1120	Open in IMG/M
3300025972\|Ga0207668_10104939	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300026023\|Ga0207677_11869540	Not Available	558	Open in IMG/M
3300026041\|Ga0207639_10854602	Not Available	849	Open in IMG/M
3300026067\|Ga0207678_10433153	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300026067\|Ga0207678_10437036	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300026067\|Ga0207678_11483198	Not Available	599	Open in IMG/M
3300026121\|Ga0207683_10119200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2368	Open in IMG/M
3300028380\|Ga0268265_12285622	Not Available	547	Open in IMG/M
3300028768\|Ga0307280_10307960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	579	Open in IMG/M
3300028784\|Ga0307282_10268809	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031538\|Ga0310888_10834665	Not Available	572	Open in IMG/M
3300031682\|Ga0318560_10801122	Not Available	509	Open in IMG/M
3300031723\|Ga0318493_10362345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	789	Open in IMG/M
3300031724\|Ga0318500_10216894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	921	Open in IMG/M
3300031779\|Ga0318566_10236733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	906	Open in IMG/M
3300031820\|Ga0307473_11358305	Not Available	534	Open in IMG/M
3300031954\|Ga0306926_10751847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	1179	Open in IMG/M
3300032067\|Ga0318524_10732444	Not Available	522	Open in IMG/M
3300032090\|Ga0318518_10658906	Not Available	533	Open in IMG/M
3300032180\|Ga0307471_101041787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	985	Open in IMG/M
3300032205\|Ga0307472_101426162	Not Available	673	Open in IMG/M
3300032205\|Ga0307472_102094768	Not Available	569	Open in IMG/M
3300033500\|Ga0326730_1085167	Not Available	591	Open in IMG/M
3300033501\|Ga0326732_1034011	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300033513\|Ga0316628_101022640	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300034090\|Ga0326723_0338531	Not Available	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.22%
Host-Associated	Host-Associated	40.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.31%
Plants	Host-Associated → Plants	40.78%
Aquatic	Environmental → Aquatic	2.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.71%
Peat	Environmental → Terrestrial → Peat	2.91%
Sediment	Environmental → Aquatic → Sediment	1.94%
Marine	Environmental → Aquatic → Marine	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015087	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6A, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055433_101637961	3300004025	Natural And Restored Wetlands	HQPKGTMRFEFIGDTAQGMVSLSRSPADTARSPEAVHQPIGGPLFDSNVLELVVAALPLGPQFTADLPFFIYERGGRVSMPVAVRERARVGFPILGEREVWVVSVGVPRAPATVWVDTATREVLRVRYDISAAAMSFTDDRMTPLRS*
Ga0070683_1007818502	3300005329	Corn Rhizosphere	PIFDSNIIEMVVAALPLAPRFATELPFFIYERGGRVSMHVAGQERTSVQFPLLGARDAWVVSVAVPGAPATVWVDARTRDVLRVRYDIRAQDVAFTDDRMTPLH*
Ga0070682_1008202772	3300005337	Corn Rhizosphere	FAFVGDSAVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG*
Ga0070660_1010743782	3300005339	Corn Rhizosphere	FVGDSAVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG*
Ga0070687_1003178321	3300005343	Switchgrass Rhizosphere	VSHSSHQPTRTMLFEFKGGAAEGTVAFRRPTGDSVVNVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0070692_107170581	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	STKDSTAVKSVHQSLGGPIFDSNVIDLVVASLPLAPGFSAELPFFIYERGGRVPMTVAVRDRSTFDSPTLGKRDAWIVTVGVPGAPATVWVDSKTHAVLRVRYDIAARGVSFTDDRITPLRA*
Ga0070669_1005434731	3300005353	Switchgrass Rhizosphere	ESAISSIASPANPVHQSLGGPIFDSNVIDLVVASLPLERGFSAELPFFIYERGGRVPMTVTVRDRSTVDSPTLGKRDAWIVTAGVPGAPATVWVDAKTRAVLRVRYDIAARGVSFIDDRLTPLRG*
Ga0070675_1003210841	3300005354	Miscanthus Rhizosphere	ALGGPIFDSNVIELVVAALPLRAGFTAELPFFIYERGGRVPMQVTVRERSMVPFSSFGTRDSWVVSVAVPGAPATVWVDAKTRSVLRVRYDITARNMSFTDDRITPLHQGRGGAISPA*
Ga0070675_1018223761	3300005354	Miscanthus Rhizosphere	HQSHQPKRTMRFDFVGDTAVGIVTQSGAADTARSPESVHQPIGGPIFDSNVLELVVAAMPLGPGFTADLPFFIYERGGRVSMPVTVRERARVAFPILGEREVWVVSVGVPRAPATVWVDTATREVLRVRYDITASAMSFTDDRMTPLRS*
Ga0070674_1000193397	3300005356	Miscanthus Rhizosphere	KGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG*
Ga0070673_1008582901	3300005364	Switchgrass Rhizosphere	TAEGSVTTRDSVQTVRQALGGPIFDSNVIELVVAALPLRAGFTAELPFFIYERGGRVPMQVTVRERSMVPFSSFGTRDSWVVSVAVPGAPATVWVDAKTRSVLRVRYDITARNMSFTDDRITPLHQGRGGAISPA*
Ga0070700_1001855801	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ISSVASPANPVHQSLGGPIFDSNVIDLVVASLPLVRGFSAELPFFIYERGGRVPMTVTVRDRSTVDSPTLGKRDAWIVTAGVPGAPATVWVDAKTHAVLRVRYDIAARGVSFIDDRLTPLRG*
Ga0070708_1007718852	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DSNVLDLVVAGLPLREGFSAELPFFIYERGGRVPMAVAVRERATVPFFRLGRREAWVVTVGVPGAPATVWVDRRTHDVLRVRYDISARGVSFTDERVTVLRR*
Ga0070663_1016680041	3300005455	Corn Rhizosphere	GPIFDSNIIEMVVVGLPLATNFTTELPFFIYERGGRVPMRVAVQERAVVQFPALGSREAWLVSVDVPGAPATVWVDARTRDVLRVRYDLRAQGMAFTDDRTTPLPPRHG*
Ga0070678_1005603973	3300005456	Miscanthus Rhizosphere	AHSSHQPTRTMLFEFKGDAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0070696_1008255292	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SNVIDLVVASLPLARAFSAELPFFIYERGGRVPMAVTVRDRADVDFPNLGKRDTWIVSVAVPGAPATVWVDAKTHAVLQVRYDIAARGVSFTDTRLTPLRG*
Ga0070693_1005050462	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	PTKTMSFDFSADAASGTVTTRSASGDSVANVKQNLGGAIFDSNIIDLVVAALPLRSGFSVDLPFFIYERGGRVVMPVSVRDHASFPFAKLGNRDAWVVNVGVPGAPATVWVDAQTRAVLRVRYDISARGMSFTDERITPLRG*
Ga0070704_1019577801	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	HRSHQPTRTMQFAFVGDSAVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAVPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG*
Ga0068859_1003589173	3300005617	Switchgrass Rhizosphere	PIFDSNIIEMVVAALPLAPRFATELPFFIYERGGRVSMHVAVQERTSVQFPLLGARDAWVVSVAVPGAPATVWVDARTRDVLRVRYDIRAQDVAFTDDRMTPLH*
Ga0075277_10704142	3300005895	Rice Paddy Soil	FDSNIIDLVVSALPLDSGFSVDVPFFFYERGGRVPMRVTVAERATMTFPRFGPREVWVVTVGVPGAPATFWIDTQTRVLLRGRYDIPARATSFGEQRMTPLP*
Ga0075432_104195222	3300006058	Populus Rhizosphere	LGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0079222_114499401	3300006755	Agricultural Soil	RPAGDSVTPVQQSLGGPIFDSNVIDLVVAALPLRPGFATELPFFIYERGGRVAMPVTVRERTMVTFARLGPRDVWIVSVGVPGAPATIWVDTRTHVVLRVRYDIAARALSFTDERITPLHG*
Ga0075425_1000393208	3300006854	Populus Rhizosphere	GGPLFDSNVIDLVVGGLPLREGFSEELPFFFYERGGRVLMRVTVRERTSMVFAKLGQRDVWIVSVAVPGAPATMWVDAKAHVPLRVRYELPTVSFTDERITPLSRRRVD*
Ga0075425_1011995582	3300006854	Populus Rhizosphere	FGGSDAHGTVIALRPAGDSVTPVQQSLGGPIFDSNVIDLVVAALPLRPGFATELPFFIYERGGRVAMQVAVRERTTVTFTRLGPRDVWIVSVGVPGAPATVWVDTRTHAVLRVRYDIAARALSFTDERVTRLHG*
Ga0075426_100947654	3300006903	Populus Rhizosphere	GGPIFDSNVIDLVVAALPLRPGFATELPFFIYERGGRVAMQVAVRERTTVTFTRLGPRDVWIVSVGVPGAPATVWVDTRTHAVLRVRYDITARALSFTDERVTRLHG*
Ga0075426_104698833	3300006903	Populus Rhizosphere	RVHQALGGPIFDSNVIDLVVAALPLHQGFTADLPFFIYERGGRVSIPVAVQERATVTFSRLGPRDVWIVSVGVPGAPATVWVDTKAHVALRVRYDIAARALSFTDERVTPLHG*
Ga0075435_1001616423	3300007076	Populus Rhizosphere	SLGGPIFDSNVIDLVVAALPLRPGFATELPFFIYERGGRVAMQVAVRERTTVTFTRLGPRDVWIVSVGVPGAPATVWVDTRTHAVLRVRYDIAARALSFTDERVTRLHG*
Ga0105240_104248781	3300009093	Corn Rhizosphere	SAVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG*
Ga0105245_102445611	3300009098	Miscanthus Rhizosphere	TTKAVHQPLGGPIFDSNVIDVVVASLPLAPNFSTELPFFIYERGGRVPMQVAVRKRANVDFPKLGNRDTWIVTVGVPGAPATVWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG*
Ga0105241_112015181	3300009174	Corn Rhizosphere	TTKAVHQPLGGPIFDSNVIDLVVASLPLAPNFSIELPFFIYERGGRVPMQVAVRERANVDFPKLGNRDTWIVTVGVPGAPATVWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG*
Ga0105242_106094422	3300009176	Miscanthus Rhizosphere	MLFEFKGDAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0134125_104475822	3300010371	Terrestrial Soil	MLFEFKGGAAEGTVAFRRPTGDSVVNVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0134128_103445134	3300010373	Terrestrial Soil	MQFAFVGDSAVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG*
Ga0134124_103316011	3300010397	Terrestrial Soil	PDSATRIEAVHQDVGGRIYDSNIIELVVAALPLKVAFSTEVPFFIYERGGRVPMAVAVQDRATVEFPGLGVRREAWVVSVDVPGAPATVWIDTRTRAVLRTRYDVRARGVSFTDDRITPLPSS*
Ga0134121_106641122	3300010401	Terrestrial Soil	MLFEFKGDAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSVSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0137463_10677491	3300011444	Soil	TQIAAGADAAKPQETVHQALGGPIFDSNVIELVVASLPLERGFSAELPFFIYERGGRVPMAVAVRERATVAFPRLGERDAWIVTVGVPGAPATIWVDAKTRAVLRVRYDIAARGLSFTDDRVTSLRG*
Ga0137463_11700911	3300011444	Soil	MRFEFVGDAAEGSVSPSGPSPDTARRVEVVHQALGGPIFDSNVLELVIAALPLTPQFTAELPFFIYERGGRVPMPIAVRERTRVGFPVLGEREVWVVTVGVPGAPATVWVDTLTRAVLRVRYDITARGMSFTDDRVTPLDRRS*
Ga0137364_114113751	3300012198	Vadose Zone Soil	FSGNDAAGTVASVGTARDSVIEVRQALGGPIFDSNVIDLVVAALPLHQGFTADLPFFIYERGGRVSIPVAVRERASVAFSRLGQRDVWIVSVGVPGAPATVWVDTKAHAALRVRYDITARALSFTDERVTPLHG*
Ga0137363_115364352	3300012202	Vadose Zone Soil	GPIFDSNVIDLVVAALPLRAGFSAELPFFIYERGGRVAMPVMVRERSTVTFARLGARDVWIVAVGVPGAPATVWVDTETRAVLRVRYDIAARGISFTDERETPLHG*
Ga0137387_110675851	3300012349	Vadose Zone Soil	LTEVRQALGGPIFDSTVIDLVFAALPLHRGFTAGLPFFIYERGGRVSIPVAVRERATVAFSRLGQRDVRIVSVGVPGAPATVWVDTRAHAALRVRYDVTARALSFTDERVTPLHG*
Ga0137387_112497902	3300012349	Vadose Zone Soil	GPIFDSNVIDLVVAALPLRAGFSAELPFFIYERGGRVAMPVTVRERSTVTFAHLGPRDVWIVAVGVPGAPATVWVDTQTRVVLRVRYDIVARGISFTDERETPLHG*
Ga0137360_114069172	3300012361	Vadose Zone Soil	ASVGTARDSVIRVRQALGGPIFDSNVIDLVVAALPLHRGFTADLPFFIYERGGRVSIPVAVRERASVAFSRLGQRDVWIVTVGVPGAPATVWVDTKAHAALRVRYDITARALSFTDERVTPLRG*
Ga0137361_100248393	3300012362	Vadose Zone Soil	MRFAFDGNDAAGTVASLGAAGDSVAQVCQPIGGPIFDSNVIDLIVASLPLRQGFTAELPFFIYERGGRVSMPVAVRERATVAFSRLGQREVWVVTVGVPGAPATVWVDTQTHAVLRVRYDISARAMSFTDERVTPLPGE*
Ga0157308_101123682	3300012910	Soil	SAPRLERVRQNLGGPIFDSNIIEMVVAGLPLATNFTTELPFFIYERGGRVPMRVAVQERAVVQFPALGSREAWLVSVDVPGAPATVWVDARTRDVLRVRYDLRAQGMAFTDDRTTPLPPRHG*
Ga0164300_110550552	3300012951	Soil	SEANGVVTEAANAKDSSATKSVHQSLGSPIFDSNVIDLVVASLPLAPGFSAELPFFIYERGGRVPMTVAVQDRSTVDSPTLGKRDAWIVTVGVPGAPATLWVDAKTHAVLRVRYEIAARGTSFTDDRITPVTRAD*
Ga0126369_127085291	3300012971	Tropical Forest Soil	FVGAQASGSVRYAATSGDSTVPVEQAIGGPIFDSNIIELVVASLPLRDGYGADVPFFIYERGGRVVMPVAVKERARVDFPHQGSRDAWVVTVGVPGAPATVWVDAATRAVLRVRYDIAARSLSFTDDRVTPLRS*
Ga0164305_120139322	3300012989	Soil	VTEAANAKDSSATKSVHQSLGSPIFDSNVIDLVVASLPLAPGFSAELPFFIYERGGRVPMTVAVQDRSTVDSPTLGKRDAWIVTVGVPGAPATLWVDAKTHAVLRVRYEIAARGTSFTDDRITPVTRAD*
Ga0157374_104670083	3300013296	Miscanthus Rhizosphere	QPLGGPIFDSNVIDLVVASLPLAPNFSTELPFFIYERGGRVPMQVAVRERANVDFPKLGNRDTWIVTVGVPGAPATIWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG*
Ga0157378_105560383	3300013297	Miscanthus Rhizosphere	MLFEFKGDAAEGTVAFRRPTADSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSVSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0157372_125048831	3300013307	Corn Rhizosphere	MRFDFTGSDADGKVTEPVAGGDSVATTKAVHQPLGGPIFDSNVIDLVVASLPLAPNFSTELPFFIYERGGRVTMQVAVRERANVDFPKLGNRDTWIVTVGVPGAPATVWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG*
Ga0120126_10045652	3300013831	Permafrost	MRFDFTGSDADGKVTEAATGGDTVPATKAVHQQLGGPIFDSNVIDLVVASLPLAPNFSTKLPFFIYERGGRVPMQVAVRERANVDFPKLGNRDAWIVTVGVPGAPATVWVDAKTHAVLRVRYDIAARGTSFTDDRITPLRG*
Ga0075321_10216172	3300014300	Natural And Restored Wetlands	VIEMIVAALPLRPGFRVDVPFFFYERGGRIPMTVAVKERATVTFPRFGARDAWVVTVDVPGAPATFWIDAETRAVLRGRYDITARAMSFGEERVTPLPR*
Ga0163163_101715882	3300014325	Switchgrass Rhizosphere	VWPWACARVASSGRRAYFDSNIIDLVVASLPLERGFSAELPFFIYERGGRVEMPVAVRERTSVDLSRLGHRDVWIVTVGIPGAPATMWVDAKTHVALRVRYDIAARGVSFTDERVTPLRG
Ga0157379_109307081	3300014968	Switchgrass Rhizosphere	RDSMPRVENVRQNVGGPIFDSNIIEMVVAALPLAPRFATELPFFIYERGGRVSMHVAVQERTSVQFPLLGARDAWVVSVAVPGAPATVWVDARTRDVLRVRYDIRAQDVAFTDDRMTPLH
Ga0157379_116369291	3300014968	Switchgrass Rhizosphere	PRIEKVRQNVGGPIFDSNIIEIVIAALPLAPNFTSELPFFIYERGGRVPMRVAVQDRASVPFPLLGAREAWLVSVDVPGAPAMVWVDTRTHDVLRVRYDVRAQGIAFTDDRTTPLSKRG*
Ga0167637_10321421	3300015087	Glacier Forefield Soil	KRTMRFEFVRDTAQGTVSAIGPAPDTSRHLEAVHQSLGGPLFDSNVLELVVASLPLEPRFTAELPFFFYERGGRVPMPVAVRERAQVGFPVLGERDVWIVSVGVPGAPATVWVDAATRDVLRVRYDITAAAVSFTDDRVTPLRS*
Ga0132256_1015776831	3300015372	Arabidopsis Rhizosphere	DELHTLRAVSHSSHQPTRTMLFEFKGGAAEGTVAFRRPTGDSVVNVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG*
Ga0132255_1005734691	3300015374	Arabidopsis Rhizosphere	MRFDFVGDDAVGTVTDAPAAAGSSTPAREIRQPLGGPIFDSNIIELVVASLSLERAYSTTLPFFIFERGGRVPMPVAVRDRATLPFGRLGDRDAWIVSVGVPGAPATVWVDVKTRAVLRVRYDVTARDLSFTDDRVTPLRG*
Ga0132255_1026919541	3300015374	Arabidopsis Rhizosphere	QFEFKGDAAVGTVAFKRPGGDSVINVRQDLGGGVFDSNVIDLVVGTLPLAPDYSVSLPFFLYERGGRVMTPVKVREKTSTSFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDITARGMSFTDERVTPLHG*
Ga0187785_107456321	3300017947	Tropical Peatland	TMRFTFADSDAQGTVIAIRAGGDSVAAVHQSLGGPIFDSNVIDLVVAALPLREGFSAELPFFIYERGGRVAMPVAVRARAPVAFARLGVRETWIVSVGVPGAPATVWVDTRTHRVLRVRYDITARAMSFTDERVTPLGG
Ga0187776_100822954	3300017966	Tropical Peatland	LMAFRFEGGHAKGSVTLLRPAGDSTVAVDLDVGGPIFDSNIIELVVAALPLSEGALFRVPFFLYERGGRVEMSVAVRERSRSTFGRLGVREAWVVSVPISGAPATVWVDVRTRAVLRVRYDIAARNMSFTDQRVTDLPS
Ga0066669_108330831	3300018482	Grasslands Soil	PTRTMRFDFDGNTAQGTVALKRVSGDSVLQVKQDLGGPIFDSNVIDLVVAELPLAPGYSANLPFFVYERGGRVMTPVKVRERASIPFGKLGQRDVWIVDVGVPGAPATMWIDAQAHTLLRVRFDIPARGFSLTDERITPLPG
Ga0193722_10633961	3300019877	Soil	ARTMRFTFSRNDAAGTVASLGTARDSVVQVRQALGGPIFDSNVIDLVIAALPLRLGFTADLPFFIYERGGRVSIPVAVRERATVAFSRLGQRDVWIVSAGVPGAPATVWVDTKTHAALRVRYDIAARALSFTDERVTPLHG
Ga0193725_10357173	3300019883	Soil	HQSLGGPIFDSNVIDLVVASLPLERGFSAELPFFIYERGGRVPMTVAVRDRSTFDSPTLGKRDAWVVTVGVPGAPATVWVDSKTHAVLRVRYDIAARGVSFTDDRITPLPA
Ga0247693_10533072	3300024181	Soil	RDSITRVRQAVGGPIFDSNVIDLVVAALPLRQGLTADLPFFIYERGGRVSIPVAVRERATVAFATIGSREVWVVAVEVPGAPATVWVDTRTHAILRVRYDITARAMSFTDERVTPLHG
Ga0207653_100188594	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	AVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVHFSKLGPRDVWVVTVAVPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG
Ga0207707_109030521	3300025912	Corn Rhizosphere	GGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG
Ga0207707_111281532	3300025912	Corn Rhizosphere	GDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLA
Ga0207646_118119921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GPIFDSNVLDLVAAALPLRADFRATLPFFIYERGGRVPMPVAVTAATSVTFPALGQREVWVVTVGVPGAPATVWVDRATRAVLRVRYDIAARATSFTDDRVTPLRG
Ga0207687_108020192	3300025927	Miscanthus Rhizosphere	TTKAVHQPLGGPIFDSNVIDVVVASLPLAPNFSTELPFFIYERGGRVPMQVAVRKRANVDFPKLGNRDTWIVTVGVPGAPATVWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG
Ga0207669_100007471	3300025937	Miscanthus Rhizosphere	KGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG
Ga0207704_106866642	3300025938	Miscanthus Rhizosphere	HLVEIAQRFPNVGGEIVDTAIDELHTLRAVAHSSHQPTRIMLFEFKGDAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG
Ga0207661_107745051	3300025944	Corn Rhizosphere	GPIFDSNIIEMVVAALPLAPRFATELPFFIYERGGRVSMHVAGQERTSVQFPLLGARDAWVVSVAVPGAPATVWVDARTRDVLRVRYDIRAQDVAFTDDRMTPLH
Ga0207661_111181611	3300025944	Corn Rhizosphere	DSMPRVDSVRQKLGGPIFDSNIIEVVVAALPLASKFTTELPFFIYERGGRVPMRVAVQERSTVQFPALGARVAWVVSVDVPGAPATVWVDARTRDVLRVRYDFRAQGMAFTDDRTTPIRSKSS
Ga0207679_110921821	3300025945	Corn Rhizosphere	VDTVHQALGGAIYDSNVIELVVASLPLAPQFSAELPFFIYERGGRVQMQVAVRERAMLSLPVIGQRETWVVAVGVPGAPATVWVDTRTRAVLRVRYDIAARAMSFTDDRATPLR
Ga0207667_105906032	3300025949	Corn Rhizosphere	MRFDFTGSDADGKVTEAATGGDSVATTKAVHQPLGGPIFDSNVIDLVVASLPLAPNFSTELPFFIYERGGRVPMQVAVRERANVDFPKLGNRDTWIVTVGVPGAPATVWVDAKTHAVLRVRYDIAARATSFTDDRITPLRG
Ga0207712_104684881	3300025961	Switchgrass Rhizosphere	FDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVHFSKLGPRDVWVVTVAVPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG
Ga0207668_101049394	3300025972	Switchgrass Rhizosphere	QFTFVGDSAVGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG
Ga0207677_118695402	3300026023	Miscanthus Rhizosphere	FTGTAADGVVTGSANSRDSAAATVHQSLGGPIFDSNIIDLVVASLPLAPGYSAELPFFIYERGGRVPMTVAVQNRSTVDSPTLGKRDAWIITVGVPGAPATLWVDAKTHAVLRVRYDIAARGVSFTDDRITPLAQL
Ga0207639_108546022	3300026041	Corn Rhizosphere	VTISPASPDSAPRLERVRQNLGGPIFDSNIIEMVVAGLPLATNFTTELPFFIYERGGRVPMRVAVQERAVVQFPALGSREAWLVSVDVPGAPATVWVDARTRDVLRVRYDLRAQGMAFTDDRTTPLPPRHG
Ga0207678_104331531	3300026067	Corn Rhizosphere	HQPTRTMLFEFKGDAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSASLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG
Ga0207678_104370363	3300026067	Corn Rhizosphere	AGSGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVQFSKLGPRDVWVVTVAIPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG
Ga0207678_114831982	3300026067	Corn Rhizosphere	RVRQNLGGPIFDSNIIEMVVAGLPLATNFTTELPFFIYERGGRVPMRVAVQERAVVQFPALGSREAWLVSVDVPGAPATVWVDARTRDVLRVRYDLRAQGMAFTDDRTTPLPPRHG
Ga0207683_101192004	3300026121	Miscanthus Rhizosphere	LCSEFKGDAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSTSLPFFLYERGGRVMTPVKVREKTSVPFARLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLRG
Ga0268265_122856221	3300028380	Switchgrass Rhizosphere	GDSAMGTVSTAKGDSAPRVESVRQGLGGPIFDSNVIDLVVAALPLHPQFATELPFFIYEKGGRVPMAVEVRERTSVHFSKLGPRDVWVVTVAVPGAPATVWVDTQTRAVLRVRYDISDANLSFTDERVTPLAG
Ga0307280_103079601	3300028768	Soil	DAEGMVTEAAPAGDSARATKAVHQPLGGPIFDSNVIDLVIASLPLEQNFSTELPFFIYERGGRVPMQVAVRERAKVDFPKFGNRDAWIVTVGVPGAPATVWVDAKTRAVLRVRYDIAARGMSFTDDRITPLPG
Ga0307282_102688091	3300028784	Soil	AVHAPTGDSVAPVHQALGGPIFDSNIIELVVAALPLRPGFAAELPFFIYERGGRVVMPVSVRDRTTVSFSTFGPRQVWVVGVGVPGAPATVWVDTETKAVLRVRYDITARATSFTDERVTPLHG
Ga0310888_108346651	3300031538	Soil	QHLVEIAQRFPNVGGEIVDTAIDELHTLRAVAHSSHQPTRTMLFEFKGGAAEGTVAFRRPTGDSVINVHQELGGGVFDSNVIDLVVGELPLAPNYSASLPFFLYERGGRVMTPVKVREKTSVPFAKLGEREVWVVDVGVPGAPATVWVDTRTHTVLRIRYDIAARGTSFTDERVTPLHG
Ga0318560_108011221	3300031682	Soil	FDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRTSVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0318493_103623451	3300031723	Soil	PCARTMRFTFVGERAQGSVVFLRATGDSTVAVDQAVGAIFDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRASVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0318500_102168941	3300031724	Soil	TFVGERAQGSVVFLRATGDSTVAVDQAVGAIFDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRTSVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0318566_102367331	3300031779	Soil	VVFLRATGDSTVAVDQAVGAIFDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRPSVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0307473_113583051	3300031820	Hardwood Forest Soil	VGTVLTTQGDSAPREEAVRQGLGGPIFDSNVLDLVVAALPLHPQFTTELPFFIYEKGGRVPMAVAVRDRTTVEFSKLGPRDVWVVTVAVPGAPATVWIDTHTRAVLRVRYDISDRKLSFTDERVTPLAG
Ga0306926_107518471	3300031954	Soil	TMRFTFVGERAQGSVVFLRATGDSTVAVDQAVGAIFDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRTSVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0318524_107324442	3300032067	Soil	RIVRAQGSVVFLRATGDSTVAVDQAVGAIFDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRASVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0318518_106589061	3300032090	Soil	GSVVFLRATGDSTVAVDQAVGAIFDSNIIELVVASLPLRDGYAADVPFFIYERGGRVMMPVTVTGRTSVAFPRLGARDAWVVTVGVPGAPATVWVDATTRAVLRVRYDIAARALAFTDDRVTPLRD
Ga0307471_1010417871	3300032180	Hardwood Forest Soil	GAIFDSNVLDLAVSGLPLHQGFSAVLPFFIYERGGRVPMAVAVKERATVPFSRLGSRDAWVVTVDVPGAPATVWVDTRTHAVLRVRYDISARGISFTDERVTPLHP
Ga0307472_1014261621	3300032205	Hardwood Forest Soil	VIALRPAGDSVTPVQQSLGGPIFDSNVIDLVVAALPLRPGFATELPFFIYERGGRVATPVAVRERATVTFARLGPRDVWIVSVGVPGAPATVWVDTQTHAVLRVRYDIAARALSFTDERITPLHG
Ga0307472_1020947682	3300032205	Hardwood Forest Soil	AKDSAATKSVHQSLGGPIFDSNVIDLVVASLPLAPGFSTELPFFIYERGGRVPMTVTVQDRSTVDSPTLGKRDAWIVTVGVPGAPATLWIDAKTHTVLRVRYDIAARGTSFTDDRITPVTGTD
Ga0326730_10851671	3300033500	Peat Soil	SIPGDAVTSVHQDLGGPIFDSNVIDLVVASLPLKQGFTADVPFFIYERGGRVPMTVAVKARARVAFAKLGQREVWVVSVSVPDAPATVWVDTKTHAVLRVRYDIAARSMSFTDERVTPLR
Ga0326732_10340112	3300033501	Peat Soil	QGSVSARGVDPDTARRVEAVHQAIGGPIFDSNVLELVIAALPLAPQFTAELPFFIYERGGRVPMAVAVRERRRMEFPVLGEREVWVVTVGVPGAPATVWIDTATRAVLRVRYDITARAMSFTDDRVTPIGGGS
Ga0316628_1010226401	3300033513	Soil	SGAVRQELGGPIFDSNVIELVVAALPLDAQFSAELPFFIYERGGRVPMAVAVRERARVSFPMVGEREVWVVTVGVPGAPATIWVDTATRAVLRTRYDITARAMSFTDDRVTPLHG
Ga0326723_0338531_344_676	3300034090	Peat Soil	QDLGGLIFDSNVIDLVVASLPLKQGFTADVPFFIYERGGRVPMTVAVKARTRVTFAKLGQREVWVVSVSVPDAPATVWVDTKTHAVLRIRYDIAARSMSFTDERVTPLRG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign