NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F099036

Metagenome Family F099036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099036
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 42 residues
Representative Sequence PSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH
Number of Associated Samples 85
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.96 %
% of genes near scaffold ends (potentially truncated) 98.06 %
% of genes from short scaffolds (< 2000 bps) 87.38 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (69.903 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(29.126 % of family members)
Environment Ontology (ENVO) Unclassified
(45.631 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.485 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.71%    β-sheet: 0.00%    Coil/Unstructured: 74.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF12697Abhydrolase_6 18.45
PF13467RHH_4 6.80
PF13586DDE_Tnp_1_2 1.94
PF02738MoCoBD_1 0.97
PF04519Bactofilin 0.97
PF13683rve_3 0.97
PF01035DNA_binding_1 0.97
PF13560HTH_31 0.97
PF04909Amidohydro_2 0.97
PF13767DUF4168 0.97
PF07883Cupin_2 0.97
PF07690MFS_1 0.97
PF03330DPBB_1 0.97
PF00891Methyltransf_2 0.97
PF04780DUF629 0.97
PF00436SSB 0.97
PF03401TctC 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.97
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 0.97
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.97
COG2965Primosomal replication protein NReplication, recombination and repair [L] 0.97
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.97
COG3695Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domainTranscription [K] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.90 %
UnclassifiedrootN/A30.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502001|FACENC_F5ZO29U01AHJRJAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium503Open in IMG/M
2170459024|GZTSFBX01AMNI1All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1006892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1610Open in IMG/M
3300000956|JGI10216J12902_103412440Not Available522Open in IMG/M
3300002906|JGI25614J43888_10191663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria553Open in IMG/M
3300005332|Ga0066388_106697837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300005445|Ga0070708_100083030All Organisms → cellular organisms → Bacteria2903Open in IMG/M
3300005447|Ga0066689_10231946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1130Open in IMG/M
3300005467|Ga0070706_102102898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria510Open in IMG/M
3300005471|Ga0070698_102151431Not Available511Open in IMG/M
3300005553|Ga0066695_10422774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria823Open in IMG/M
3300005713|Ga0066905_101788974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria566Open in IMG/M
3300005764|Ga0066903_105245098Not Available685Open in IMG/M
3300006032|Ga0066696_10836978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium586Open in IMG/M
3300006794|Ga0066658_10408036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium737Open in IMG/M
3300006853|Ga0075420_101633576Not Available552Open in IMG/M
3300010047|Ga0126382_11973393Not Available554Open in IMG/M
3300010301|Ga0134070_10302359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria610Open in IMG/M
3300010301|Ga0134070_10428136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium526Open in IMG/M
3300010359|Ga0126376_11620841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria680Open in IMG/M
3300010360|Ga0126372_12306374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria588Open in IMG/M
3300010361|Ga0126378_10465385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1379Open in IMG/M
3300010376|Ga0126381_101791401All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria886Open in IMG/M
3300010376|Ga0126381_101906517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria857Open in IMG/M
3300010398|Ga0126383_10840436Not Available1002Open in IMG/M
3300012204|Ga0137374_10227707All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1582Open in IMG/M
3300012205|Ga0137362_11514762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300012209|Ga0137379_10146663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2267Open in IMG/M
3300012211|Ga0137377_10930221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria801Open in IMG/M
3300012211|Ga0137377_11177229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria696Open in IMG/M
3300012350|Ga0137372_10450847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria965Open in IMG/M
3300012350|Ga0137372_10464760All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria947Open in IMG/M
3300012353|Ga0137367_10244768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1290Open in IMG/M
3300012353|Ga0137367_10716591Not Available696Open in IMG/M
3300012355|Ga0137369_10518806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria839Open in IMG/M
3300012356|Ga0137371_10491395All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria948Open in IMG/M
3300012582|Ga0137358_10484300Not Available834Open in IMG/M
3300012923|Ga0137359_10705321Not Available879Open in IMG/M
3300012948|Ga0126375_10771185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria758Open in IMG/M
3300012948|Ga0126375_11881963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium525Open in IMG/M
3300012971|Ga0126369_11562946All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012971|Ga0126369_11679329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria724Open in IMG/M
3300012971|Ga0126369_13010910All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria552Open in IMG/M
3300016270|Ga0182036_11605968Not Available548Open in IMG/M
3300016319|Ga0182033_10758187Not Available853Open in IMG/M
3300016341|Ga0182035_11747130Not Available563Open in IMG/M
3300016357|Ga0182032_11498106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria586Open in IMG/M
3300016357|Ga0182032_11666497Not Available556Open in IMG/M
3300016371|Ga0182034_10781265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria816Open in IMG/M
3300016371|Ga0182034_11412095All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria609Open in IMG/M
3300016445|Ga0182038_10099089All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300017657|Ga0134074_1283298Not Available601Open in IMG/M
3300018027|Ga0184605_10352990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria664Open in IMG/M
3300018433|Ga0066667_10452216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1049Open in IMG/M
3300020579|Ga0210407_10222333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1469Open in IMG/M
3300021560|Ga0126371_12912823All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300025916|Ga0207663_11092514Not Available641Open in IMG/M
3300025922|Ga0207646_10565097All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1022Open in IMG/M
3300025928|Ga0207700_11291802Not Available650Open in IMG/M
3300025939|Ga0207665_10284269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1232Open in IMG/M
3300026306|Ga0209468_1068370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1193Open in IMG/M
3300026310|Ga0209239_1135190All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1004Open in IMG/M
3300028878|Ga0307278_10213536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria859Open in IMG/M
3300028878|Ga0307278_10456302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria560Open in IMG/M
3300031545|Ga0318541_10474794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria699Open in IMG/M
3300031573|Ga0310915_10722226Not Available703Open in IMG/M
3300031668|Ga0318542_10092655All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300031713|Ga0318496_10074398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1793Open in IMG/M
3300031719|Ga0306917_10879327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria701Open in IMG/M
3300031724|Ga0318500_10145540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1111Open in IMG/M
3300031736|Ga0318501_10028742All Organisms → cellular organisms → Bacteria → Proteobacteria2435Open in IMG/M
3300031736|Ga0318501_10176022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1111Open in IMG/M
3300031744|Ga0306918_11057886Not Available629Open in IMG/M
3300031777|Ga0318543_10563537Not Available510Open in IMG/M
3300031778|Ga0318498_10557055Not Available503Open in IMG/M
3300031779|Ga0318566_10424605Not Available653Open in IMG/M
3300031781|Ga0318547_10650335Not Available654Open in IMG/M
3300031782|Ga0318552_10000741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium10492Open in IMG/M
3300031782|Ga0318552_10323732All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300031796|Ga0318576_10026951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2343Open in IMG/M
3300031796|Ga0318576_10321016All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300031833|Ga0310917_10205814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1316Open in IMG/M
3300031835|Ga0318517_10323043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria697Open in IMG/M
3300031845|Ga0318511_10618672Not Available506Open in IMG/M
3300031846|Ga0318512_10027920All Organisms → cellular organisms → Bacteria2395Open in IMG/M
3300031879|Ga0306919_10119052All Organisms → cellular organisms → Bacteria → Proteobacteria1887Open in IMG/M
3300031879|Ga0306919_10535063Not Available904Open in IMG/M
3300031880|Ga0318544_10019153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2277Open in IMG/M
3300031890|Ga0306925_10978796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium864Open in IMG/M
3300031910|Ga0306923_10750515Not Available1082Open in IMG/M
3300031946|Ga0310910_11332326Not Available554Open in IMG/M
3300031947|Ga0310909_10002294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria11709Open in IMG/M
3300031947|Ga0310909_10799840Not Available779Open in IMG/M
3300031954|Ga0306926_10091706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3713Open in IMG/M
3300031954|Ga0306926_10191764All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2536Open in IMG/M
3300032025|Ga0318507_10124947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1088Open in IMG/M
3300032035|Ga0310911_10612660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria631Open in IMG/M
3300032064|Ga0318510_10337546Not Available633Open in IMG/M
3300032066|Ga0318514_10523170Not Available631Open in IMG/M
3300032068|Ga0318553_10514297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria627Open in IMG/M
3300032091|Ga0318577_10023213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2604Open in IMG/M
3300032261|Ga0306920_102661145Not Available684Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil29.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.62%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.97%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2040502001Soil microbial communities from sample at FACE Site 2 North Carolina CO2+EnvironmentalOpen in IMG/M
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACENCE_44990602040502001SoilLSIDAKGPEKEDMQSSALAPYLQRVEGSASTDWSE
FD1_036456002170459024Grass SoilKGPPEEDTQSSALAPYMRRVEPSAATDWSESKVEPKH
AP72_2010_repI_A100DRAFT_100689213300000837Forest SoilAKGPQQEDMQNSALAPYLQRVEASASTEWSESAAEPKH*
JGI10216J12902_10341244013300000956SoilVDAKGPQEEDLQSSALAPYLHRAEASASTNWSESTAEPKH*
JGI25614J43888_1019166333300002906Grasslands SoilTDLPSVEAKGPQEQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0066388_10669783713300005332Tropical Forest SoilRVENPTDQPSIHANGPQEEDMPSSALAPYLHRVEPSASTEWSESTVEPKH*
Ga0070708_10008303013300005445Corn, Switchgrass And Miscanthus RhizosphereGSQEEDMQNSALAPYLQRVEAPASTDWSESTIEPKHAEL*
Ga0066689_1023194623300005447SoilPSVEAKGPQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0070706_10210289813300005467Corn, Switchgrass And Miscanthus RhizosphereLVEAKGPQEEDIQNSALAPYLQRVEASASTDWPESAAEPNH*
Ga0070698_10215143123300005471Corn, Switchgrass And Miscanthus RhizosphereVEAKGSQEEDMQNSALAPYLQRVEAPASTDWSESTIEPKHAEL*
Ga0066695_1042277413300005553SoilPQEEDMQNSALAPYLQRVEASASTDLSESAAEPKH*
Ga0066905_10178897413300005713Tropical Forest SoilNPTDLPAVDAKGPQEEDMRGSALAPYLQRAEASASTEWSESTAEPKH*
Ga0066903_10524509813300005764Tropical Forest SoilNPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSESAAEPKH*
Ga0066696_1083697813300006032SoilAKGPEKEDKQSSALSPYMQRVEEPASTEWSESAIEPKH*
Ga0066658_1040803613300006794SoilKGPQETDMRSSALAPYLQRAEASGSPDWSESAVEPKH*
Ga0075420_10163357613300006853Populus RhizospherePPVDAKGPRDEDMQSSALAPYLQRVEPSASSEWSESTVEPKH*
Ga0126382_1197339313300010047Tropical Forest SoilENPTDLPSVEAKGPQQEDMQNSALAPYLQRVEASASTEWSESAAEPKH*
Ga0134070_1030235923300010301Grasslands SoilKGPQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0134070_1042813613300010301Grasslands SoilVENPTDELLVDAKGPQETDMRSSALAPYLQRAEASGSPDWSESAIEPKH*
Ga0126376_1162084123300010359Tropical Forest SoilEQPSIDAKGAREEDMQSSALAPYLHRVEPSASTEWSESTVEPKH*
Ga0126372_1230637413300010360Tropical Forest SoilENPTDAPLVDAKGPQDADMRSSALAPYLQTVEASESPDWSEPKH*
Ga0126378_1046538533300010361Tropical Forest SoilDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTEWSESAAQPKH*
Ga0126381_10179140113300010376Tropical Forest SoilRRVENPTDQPSVGAKGPQEEDMQGSALASYLHRVEPSASTDWSESTVEPKH*
Ga0126381_10190651713300010376Tropical Forest SoilPTDSPSVDAKGPQEDLQTSALAPYLRQAPAAADWSEATAEPKH*
Ga0126383_1084043633300010398Tropical Forest SoilENPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSESAAEPKH*
Ga0137374_1022770713300012204Vadose Zone SoilPTDAPSVDAKGPRDEDMQSSALAPYLQRVEPSASPEWSESTVEPKH*
Ga0137362_1151476223300012205Vadose Zone SoilTDLPSVEAKGPQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0137379_1014666333300012209Vadose Zone SoilVDAKGPQEEDMRSSALAPYLQRAEASASTDWSESTAEPKH*
Ga0137377_1093022113300012211Vadose Zone SoilEPLVDAKGPQETDMRSSALAPYLQRAEASGSPDWSESAVEPKH*
Ga0137377_1117722923300012211Vadose Zone SoilVDAKGPRDEDVRSSALAPYLQRGEPSASTEWSDSTVEPKH*
Ga0137372_1045084713300012350Vadose Zone SoilRVENPTDAPSVDAKGPRDEDMQSSALAPYLQRVEPSASSEWSESTVEPKH*
Ga0137372_1046476023300012350Vadose Zone SoilAKGPQEEDMRSSALAPYLQRVEASASTEWSESTAEPKH*
Ga0137367_1024476813300012353Vadose Zone SoilAKGSRDEEMQSSALAPYLQRAEGSASTEWSESTVEPKH*
Ga0137367_1071659123300012353Vadose Zone SoilSVDAKGPRDEDVRSSALAPYLQRVEPSASSEWSESAVEPQH*
Ga0137369_1051880623300012355Vadose Zone SoilENPTDAPSVDAKGPRDENMQSSALAPYLQRVEPSASSEWSESAVEPKH*
Ga0137371_1049139513300012356Vadose Zone SoilPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH*
Ga0137358_1048430013300012582Vadose Zone SoilGPKKEDMQSSVLAPYLQRVEEPGSTEWSDSAVEPKH*
Ga0137359_1070532113300012923Vadose Zone SoilAKGPKKEDMQSSVLAPYLQRVEEPGSTEWSDSAVEPKH*
Ga0126375_1077118523300012948Tropical Forest SoilVENPTDLPSVEAKGPQQEDMQNSVLAPYLQRVEASASTDWSESAAEPNH*
Ga0126375_1188196323300012948Tropical Forest SoilKGPEKEDMQGSALAPYLERVKESASTEWSESTVESKY*
Ga0126369_1156294623300012971Tropical Forest SoilDQPSVGAKGPQEEDVQSSALASYLQRVETSASTDWSESTVEPKH*
Ga0126369_1167932923300012971Tropical Forest SoilVENPTEQPPIDAKGAREEDVQSSALAPYLHRVEPSASTEWSESTVEPKH*
Ga0126369_1301091013300012971Tropical Forest SoilSVEAKGPQEEDMQNSALAPYLQRVEASASTDWPESAAEPKH*
Ga0182036_1160596823300016270SoilPSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0182033_1075818743300016319SoilDAPSVDDKGPQEEDIQSSALAPYLHRVEASASTEWSESTVEPRH
Ga0182035_1174713013300016341SoilGPQEEDMQNSALAPYLQRVEAPASADWSESAAEPKH
Ga0182032_1000788273300016357SoilRRVENPMDLSSPADAKRSQKVDRENSALAPYLQRVEDSASTEWSEATVEPKH
Ga0182032_1149810613300016357SoilNPMDAPSIDAKGPQEEDVRSSALAPYLQRVEASGSTDWSESTVEPKH
Ga0182032_1166649713300016357SoilTDLPSVEAKGPQEEDIQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0182034_1078126523300016371SoilVENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWA
Ga0182034_1141209513300016371SoilQPSAGAKGPQEEDMQGSALASYLHRVEPSASTDWSESTVEPKH
Ga0182038_1009908913300016445SoilKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0134074_128329813300017657Grasslands SoilKSPQEEDMQRSALAPYLQRVETSASTEWSESTVEPKH
Ga0184605_1035299013300018027Groundwater SedimentKDPQKEDMQSSALAPYLQRVEGSASTEWSESTVEPKH
Ga0066667_1045221613300018433Grasslands SoilTRRIENPTEPPSVDAKGPRDEGVRSSALAPYLQRVEPSASTEWSDSTVEPKH
Ga0210407_1022233313300020579SoilPSVEAKGPPEEDTQSSALAPYMRRVEPSAATDWSESKVEPKH
Ga0126371_1291282313300021560Tropical Forest SoilAKGPQEEDMRSSALAPYLQRAEASASTEWSESTAEPKH
Ga0207663_1109251413300025916Corn, Switchgrass And Miscanthus RhizosphereNPTDPSSIGAKGPQKQDMPSSALAPYLQRVEESASTEWSDSAVEPKH
Ga0207646_1056509723300025922Corn, Switchgrass And Miscanthus RhizosphereIDAKGPQEEDMPSSALAPYLHRVEPSASSEWSESTVEPKH
Ga0207700_1129180213300025928Corn, Switchgrass And Miscanthus RhizosphereLPSVDANGPRDEDMHSSALTPYLQRVEASGATDWSESAAEPKH
Ga0207665_1028426943300025939Corn, Switchgrass And Miscanthus RhizosphereENPTEPSSSVDAKGPQKKDMQSSALAPYLQRAEGSASTEWSESTVEPKH
Ga0209468_106837013300026306SoilLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH
Ga0209239_113519023300026310Grasslands SoilVENPTDAPSVDAKGPRDEDVRSSALAPYLQRAEPSASTEWSDSTVEPKH
Ga0307278_1021353613300028878SoilDAKGPRDEDMQSSALAPYLQRVEPSASSEWSESTVEPKH
Ga0307278_1045630223300028878SoilGPRDEDMQSSALAPYLQRVEPSVSGEWSESTVEPKH
Ga0318541_1047479423300031545SoilIGAKGPQEEDMQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0310915_1072222613300031573SoilSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0318542_1009265513300031668SoilENPTDLPSVEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0318496_1007439843300031713SoilPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0306917_1087932713300031719SoilTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWPE
Ga0318500_1014554033300031724SoilLPSVEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0318501_1002874213300031736SoilVEAEGPQEEGMQDSALAPYLQRAEASASTEWSESAAEPKH
Ga0318501_1017602233300031736SoilPSVEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0306918_1105788623300031744SoilVENPTDLPSVEAQGPKEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0318543_1056353713300031777SoilLRSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318498_1055705513300031778SoilPQEEDLQSSALAPYLQRVEESASTEWSESTVEPKH
Ga0318566_1042460513300031779SoilENPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318547_1065033513300031781SoilENPTELPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318552_1000074113300031782SoilKGPKEEDMRGSALAPYLQRAEASASTEWSESTAEPKH
Ga0318552_1032373223300031782SoilKGPREEDLQSSALAPYLQRVEESASTEWSESTVEPKH
Ga0318576_1002695113300031796SoilDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318576_1032101613300031796SoilRYEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0310917_1020581423300031833SoilRRVENPTDQPSVGAKGPQEEDVQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0318517_1032304323300031835SoilSIGTKGPQEEDMQGSALASYLHRVEPSASTDWSESTVEPKH
Ga0318511_1061867213300031845SoilVENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWPE
Ga0318512_1002792013300031846SoilLTDLPSVEAKGPQQEDMQNSALAPYLQRVEASASTEWSESAAEPKH
Ga0306919_1011905233300031879SoilGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0306919_1053506313300031879SoilVDSKGLEKEDMQGSALAPYLERVKESASTEWSESTVESKY
Ga0318544_1001915333300031880SoilAKGPQEEDMQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0306925_1097879613300031890SoilRRVENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH
Ga0306923_1075051533300031910SoilLPSVEAQGPQEEDMQNSALAPYLQRVEASASTDWPESAAEPKH
Ga0310910_1133232623300031946SoilVENPTDLPSVEAKGPQEEDMQNSALAPYLQRFEAPASTDWSESAAEPKH
Ga0310909_1000229463300031947SoilMDLSSPADAKRSQKVDRENSALAPYLQRVEDSASTEWSEATVEPKH
Ga0310909_1079984013300031947SoilENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWA
Ga0306926_1009170613300031954SoilAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0306926_1019176433300031954SoilDLPSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0318507_1012494713300032025SoilVEAKGPPEEDMQNSALAPYLQRVEASASTEWSESAAEPKH
Ga0310911_1061266023300032035SoilIGAKGPQEEGMQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0318510_1033754613300032064SoilENPTDLPSVEAEGPQEEGMQDSALAPYLQRAEASASTEWSESAAEPKH
Ga0318514_1052317013300032066SoilVEAEGRQEEDIQNSALAPYLQRVEAPASTDWSESAAEPKH
Ga0318553_1051429713300032068SoilQPSVGAKGPQEEDVQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0318577_1002321313300032091SoilADAKRSQKVDRENSALAPYLQRVEDSASTEWSEATVEPKH
Ga0306920_10266114523300032261SoilRVENPTDLPSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH


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