Metagenome / Metatranscriptome Family F099029

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099029
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	61 residues
Representative Sequence	MAGTVTGSLVQQFASMKPTEFGPTIEPKWQVAERLMKEIRGAVEKQQLTPLDGARVI
Number of Associated Samples	82
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.10 %
% of genes near scaffold ends (potentially truncated)	97.09 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.146 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.126 % of family members)
Environment Ontology (ENVO)	Unclassified (41.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.165 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF03364	Polyketide_cyc	2.91
PF02852	Pyr_redox_dim	2.91
PF02148	zf-UBP	0.97
PF01103	Omp85	0.97
PF07726	AAA_3	0.97
PF08241	Methyltransf_11	0.97
PF09363	XFP_C	0.97
PF13683	rve_3	0.97
PF00694	Aconitase_C	0.97
PF09995	MPAB_Lcp_cat	0.97
PF00482	T2SSF	0.97
PF03861	ANTAR	0.97
PF01521	Fe-S_biosyn	0.97
PF00150	Cellulase	0.97
PF00211	Guanylate_cyc	0.97
PF12728	HTH_17	0.97
PF13302	Acetyltransf_3	0.97
PF00043	GST_C	0.97
PF07992	Pyr_redox_2	0.97
PF06983	3-dmu-9_3-mt	0.97
PF08003	Methyltransf_9	0.97
PF05721	PhyH	0.97
PF00903	Glyoxalase	0.97
PF04007	DUF354	0.97
PF00534	Glycos_transf_1	0.97
PF00962	A_deaminase	0.97
PF13426	PAS_9	0.97
PF01794	Ferric_reduct	0.97
PF00582	Usp	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.97
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	0.97
COG1817	Predicted glycosyltransferase	General function prediction only [R]	0.97
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.97
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.97
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.97
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.97
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.97
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.97
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.97
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.97
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.15 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.15 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.15 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.50 %
Unclassified	root	N/A	4.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.61 %
Unclassified	root	N/A	4.85 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	71.84 %
Unclassified	root	N/A	4.85 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.97 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	69.90 %
Unclassified	root	N/A	4.85 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.97 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.90 %
Unclassified	root	N/A	4.85 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.97 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.90 %
Unclassified	root	N/A	4.85 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.97 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.90 %
Unclassified	root	N/A	4.85 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.97 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101341793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300000956\|JGI10216J12902_106753145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300004081\|Ga0063454_101883647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005171\|Ga0066677_10629947	Not Available	606	Open in IMG/M
3300005176\|Ga0066679_10554316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300005177\|Ga0066690_10504816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300005186\|Ga0066676_10098858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1767	Open in IMG/M
3300005186\|Ga0066676_10914631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300005450\|Ga0066682_10270450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1095	Open in IMG/M
3300005450\|Ga0066682_10323607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300005451\|Ga0066681_10527446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300005458\|Ga0070681_10632272	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005467\|Ga0070706_101643795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005471\|Ga0070698_102201132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300005536\|Ga0070697_102086688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300005545\|Ga0070695_101906050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005553\|Ga0066695_10683135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300005556\|Ga0066707_10145174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1500	Open in IMG/M
3300005556\|Ga0066707_10765328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300005558\|Ga0066698_10407534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300005558\|Ga0066698_10955213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300005558\|Ga0066698_11084016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300005569\|Ga0066705_10315903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300005569\|Ga0066705_10719100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300005576\|Ga0066708_10857298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300005576\|Ga0066708_10877470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300005764\|Ga0066903_100100349	All Organisms → cellular organisms → Bacteria	3907	Open in IMG/M
3300005764\|Ga0066903_102098807	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005764\|Ga0066903_105979639	All Organisms → cellular organisms → Bacteria → Terrabacteria group	638	Open in IMG/M
3300005764\|Ga0066903_107448054	Not Available	565	Open in IMG/M
3300005764\|Ga0066903_108803539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300006031\|Ga0066651_10762812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300006032\|Ga0066696_10337878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300006046\|Ga0066652_101376981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300006046\|Ga0066652_101809533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006794\|Ga0066658_10926880	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006800\|Ga0066660_11000536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300006800\|Ga0066660_11353438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300009012\|Ga0066710_100997090	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300009012\|Ga0066710_101220711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1165	Open in IMG/M
3300009012\|Ga0066710_102849049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300009137\|Ga0066709_101451584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300009137\|Ga0066709_102876698	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009817\|Ga0105062_1015693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300009820\|Ga0105085_1064152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300010037\|Ga0126304_10443691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300010043\|Ga0126380_10045676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2331	Open in IMG/M
3300010043\|Ga0126380_11920488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300010047\|Ga0126382_11585981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300010134\|Ga0127484_1005639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300010323\|Ga0134086_10148698	All Organisms → cellular organisms → Bacteria → Terrabacteria group	854	Open in IMG/M
3300010333\|Ga0134080_10307348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300010337\|Ga0134062_10485003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300010362\|Ga0126377_12845061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300010376\|Ga0126381_104416306	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010398\|Ga0126383_13407866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300011271\|Ga0137393_10171900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1819	Open in IMG/M
3300012198\|Ga0137364_11099483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300012199\|Ga0137383_10419029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300012199\|Ga0137383_11211549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300012201\|Ga0137365_10758664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300012204\|Ga0137374_10086852	All Organisms → cellular organisms → Bacteria	3005	Open in IMG/M
3300012206\|Ga0137380_10600304	All Organisms → cellular organisms → Bacteria → Terrabacteria group	963	Open in IMG/M
3300012207\|Ga0137381_10547899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300012207\|Ga0137381_11348309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300012208\|Ga0137376_11381807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300012209\|Ga0137379_11825881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012211\|Ga0137377_11638546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300012350\|Ga0137372_10483473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300012353\|Ga0137367_11161322	Not Available	518	Open in IMG/M
3300012354\|Ga0137366_10707782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300012354\|Ga0137366_10806547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300012355\|Ga0137369_10422050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300012356\|Ga0137371_11030145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300012360\|Ga0137375_10055960	All Organisms → cellular organisms → Bacteria → Proteobacteria	4260	Open in IMG/M
3300012930\|Ga0137407_11305143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300012948\|Ga0126375_10609115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300012977\|Ga0134087_10101661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1205	Open in IMG/M
3300015373\|Ga0132257_103288560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300018027\|Ga0184605_10361846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300018422\|Ga0190265_12235690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300018431\|Ga0066655_10805521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300018433\|Ga0066667_11364291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300018468\|Ga0066662_11232084	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760	Open in IMG/M
3300018469\|Ga0190270_11200559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300019377\|Ga0190264_10534818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300025917\|Ga0207660_10289068	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300025938\|Ga0207704_10755313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	809	Open in IMG/M
3300026327\|Ga0209266_1281008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300026332\|Ga0209803_1209364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300026547\|Ga0209156_10258640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300027277\|Ga0209846_1074636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300027954\|Ga0209859_1034779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300028720\|Ga0307317_10015560	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300028791\|Ga0307290_10030451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1912	Open in IMG/M
3300028828\|Ga0307312_10350902	Not Available	965	Open in IMG/M
3300028878\|Ga0307278_10488329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300031716\|Ga0310813_10463220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300031716\|Ga0310813_11796140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031764\|Ga0318535_10355126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300031819\|Ga0318568_10833425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300032261\|Ga0306920_102990047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.09%
Plants	Host-Associated → Plants	1.94%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Sediment	Environmental → Aquatic → Sediment	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.62%
Sand	Environmental → Terrestrial → Soil → Sand	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	36.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1013417932	3300000364	Soil	MAGTVTHSLVHQFASMKPTDFGASIEPKWQVADRLMKEVRTAVEKQQLTPLDGARVISSIAATLFGYDEF
JGI10216J12902_1067531452	3300000956	Soil	MAETVTTSLVRQFAAMKPTEFGPAIEPKWQVADKLVHEVRSAVEKKQLTPLDGARLISSI
Ga0063454_1018836471	3300004081	Soil	MAATVTPSLVQQFASMKPADFAATIEPKWQVAQRLVKEIQGAVEKGHLTPLDGA
Ga0066677_106299471	3300005171	Soil	MAPTVTPSLVQQFASMKPNEFGPKIEPKWQVADRLLKEVRTSVEKEYLTPLDGARLISSI
Ga0066679_105543162	3300005176	Soil	MAGTGMGSLVHQFASMKPAEFGSAIEPKWQLCDRLVKEVRVAVEKQQVSPLDGARVISSITATLFGYDEF
Ga0066690_105048162	3300005177	Soil	MAGTATGSLVQQFASMKPAEFGSAIEPTWQLGERLVKEVRSAVEKQHLSPLDGARVISSITATL
Ga0066676_100988583	3300005186	Soil	MTGTATGSLVQQFASMKPTEFGSAIEPKWQVGERLVNEVRSAVEKQHLSPLDGARVISS
Ga0066676_109146311	3300005186	Soil	MPGTMTPSLVHQYASMSPSEFGKNIEPKWQVAGELVGSVRTAVEKKQLTPLDGARLISSIAATLFGYD
Ga0066682_102704501	3300005450	Soil	MAATVTPSLVQQFASMKPTDFGRTIEPKWQVAQRLVKEIQGAVEKEHLTPLDGARTISAVAAALFGYD
Ga0066682_103236071	3300005450	Soil	MAATVTPSLVQQFASMKPTEFARTIEPKWQVAQRLVKEIQGAVEKEHLTPLDGARTISAVAAALFGYD
Ga0066681_105274461	3300005451	Soil	MAGTVNASLVHQFAAMKPAEFGATIEPKWQVADRLVKEVRTAVEKQQLTPLDGARVISSI
Ga0070681_106322721	3300005458	Corn Rhizosphere	MAGAVTHSLVHQFAAMKPAEFGATIEPKWQVADKLVKEVRTAVEKQQLTPLD
Ga0070706_1016437951	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAGTVTGSLVQQFASMKPTEFGPAIEPKWQLAERLVNEVRSAVEKQHLTPLDGARVISSITATLFGYDEF
Ga0070698_1022011322	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAGAVTHSLVHQFAAMKPTEFGATIEPKWQVADKLVKEVRMAVEKQQLTPLDGARVISSI
Ga0070697_1020866881	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAGTASGSLVQQFAAMKPTEFGSAIEPKWQVGERLVKEVRSAVEKQHLSPLDGARVISSITATLF
Ga0070695_1019060502	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAATVTHSLVQQFASMKPNEFGPMIEPKWQVGERLLKEVKASVEKGHLTPLDGARVISSITATLFGY
Ga0066701_102649113	3300005552	Soil	MAETVTASLVQQFAKMKPSEFGATIEPKWKVGERLVKEVRSAVEQQ
Ga0066695_106831352	3300005553	Soil	MAETVTPSLVRQFASMKPTEFGPAIEPKWKVADALMKQVRIAVEKEQLTPLDGARVISS
Ga0066707_101451743	3300005556	Soil	MTGMAETVTPSLVHQFASMKPTEFGKTIEPKWQVSGRLIQEVRAAVEHKELTPLDGARL
Ga0066707_107653281	3300005556	Soil	MAENFSPSLVRQFASMKPTEFGSAIEPKWKVADTLVKQVRGAVEKEQLTPLD
Ga0066698_104075341	3300005558	Soil	MAATVTPSLVQQFASMKPTDFGRTIEPKWQVAQRLVKEIQGAVEKEHLTPLDGARTISA
Ga0066698_109552131	3300005558	Soil	MAETVTHSLVHQFASMKPAEFGPTIEPKWQVGERLIKEVRSAVEKKQLTPLDGARVISSIAAT
Ga0066698_110840162	3300005558	Soil	MTGMAETVTPSLVHQFASMKPTEFGKTIEPKWHVSGRLIQEVRTAVEKKELTPLDGARLISSIAATVFGYD
Ga0066705_103159033	3300005569	Soil	MAATVTPSLVQQFASMKPADFGRTIEPKWQVAQKLVKEIQGAVEKGQLTPLDGARTISSLTATLFG
Ga0066705_107191001	3300005569	Soil	MAATVTQSLVQQFASMKPTDFARTIEPKWQVAQRLVKEIQGAVEKGHLTPLDG
Ga0066708_108572981	3300005576	Soil	MAGAVTHSLVHQFAAMKPTEFGATIEPKWQVADKLVKEVRTAVEKQQLTPLDGARVISSI
Ga0066708_108774702	3300005576	Soil	MATVTPSLVHQFASMKASEFGPAIEPKWQLGERLIKEVRSSVEKAQVTPLDGARLISSIAATLFGYDEFIL
Ga0066903_1001003491	3300005764	Tropical Forest Soil	MAPTVTASLVQQFASMKPSEFGPKIEPKWQVCDRLVKEVRSAVEKEQLTPLDGARLISSI
Ga0066903_1020988073	3300005764	Tropical Forest Soil	MAGTISPSLVHQYASMQPGEFGNSIEPKWQVGGQLVNQVRTAVEKKQLTPLDGARVISAIAATLF
Ga0066903_1059796392	3300005764	Tropical Forest Soil	MTEMVTPSLVHQFASMKPTEFGKTIEPKWNVAGRLIQEVRAAVEHKELTPLDGARLIS
Ga0066903_1074480542	3300005764	Tropical Forest Soil	MADVVTRSLVQQFASMKPAEFGSVIEPKRQLGERLIKEVKTSVEKQQVTPLDGARLI
Ga0066903_1088035391	3300005764	Tropical Forest Soil	MAETVTRSMVQQFASMKPSEFGSVIEPKWQLGERLIKEVRSSVEKQQCTPLDGARLISS
Ga0066651_107628121	3300006031	Soil	MGTVTHSLVHQFASMKPTEFGATIEPKWQVADRLVKEVRTAVEKQQLTPLDGARV
Ga0066696_103378782	3300006032	Soil	MAETVTPSLVHQFSKMKPADFGRTIEPKWQVGQRLVKEIQVAVEKEHLTPLD
Ga0066652_1013769812	3300006046	Soil	MAGTVTGSLVQQFASMKPTDFGPTIEPKWQVAERLLKEIRGAVEKQQLTPLDGARVISSITATLFG
Ga0066652_1018095331	3300006046	Soil	MAATVTHSLVQQFASMKPAEFGRTIEPKWQVAQRLVKEIQGAVEKEQLTPLDGARTISAVAATLFGYDEFI
Ga0066658_109268802	3300006794	Soil	MAGTVTPSLVQQFASMKPADFGRTIEPKWQVGQRLVKEIQVAVEKEHLTPLDGARL
Ga0066660_110005361	3300006800	Soil	MAATVTPSLVQQFASMKPADFGRTIEPKWQVAQRLVKEIQGAVEKEHLTPLDGARTISAIAASLFGYDE
Ga0066660_113534381	3300006800	Soil	MAETVTKSLVHQFAVMKPTEFGPTIEPKWQVADKLVKEVRLAVEKKHLTPLDGARVISS
Ga0066710_1009970901	3300009012	Grasslands Soil	MAGAVTHSLVHQFAAMKPTEFGATIEPKWQVADKLVKDVRLAVEKEQLTPLDGARVIASMPATLFGYDECI
Ga0066710_1012207111	3300009012	Grasslands Soil	MAATVTPSLVQQFASMKPTDFGRVIEPKWQVAQRLVKEIQGAVEKEHLTPLDGARTISAVAA
Ga0066710_1028490492	3300009012	Grasslands Soil	MAGTVHGSLVQQFASMKPTEFGPAIEPKWQLGGRLIKQVQTAVEKQELPPLDGRV
Ga0066709_1014515841	3300009137	Grasslands Soil	MAGTVTASLVQQFASMKPAEFGPAIEPKWQLGERLVKEVRSSVEKRHLSPLDGARVI
Ga0066709_1028766982	3300009137	Grasslands Soil	MAGTVTGSLVQQFASMKPTEFGPTIEPKWQVAERLMKEIRGAVEKQQLTPLDGARVI
Ga0105062_10156933	3300009817	Groundwater Sand	MAETVTPSLVRQFASMKPTEFGSAIEPKWKVADTLVKQVRTAVEKEQLTPLDGARV
Ga0105085_10641522	3300009820	Groundwater Sand	MAATVTHSLVQQFASMKANEFGPTIEPKWQVGERLLKEVKLSVEKGYLTPLDGARLISSITA
Ga0126304_104436912	3300010037	Serpentine Soil	MAETVAHSLVQQFASMKPDQFGPTIEPKWQVGERLVKEVKGSVEKGHLTPLDGARLISSITATLFGYD
Ga0126380_100456761	3300010043	Tropical Forest Soil	MAEAVTYSLVHQFSKMKPGDFGRTIEPKWQVAQKLVKEIQMAVEKQQLTPLDGARTISSLTATLFGYD
Ga0126380_119204881	3300010043	Tropical Forest Soil	MQHGSLVQQFASMKPTDFGPAIEPKWQLGGRLIKQVQTAVEKQELPPLDGARVISSITATLFG
Ga0126382_115859813	3300010047	Tropical Forest Soil	MATATSSLVQQFATMKPAEFGPAIEPKWQFGERLIKEVRVSVEKQQVTPLDGARLISSVAATLFVREHPEED
Ga0127484_10056391	3300010134	Grasslands Soil	MTETVTHSLVQQFASMKPNEFGPTIESKWQACERLVHEVRSSVEKKELTPLDGAR
Ga0134086_101486981	3300010323	Grasslands Soil	MAETVTPSLVHQFASMKPTDFGRTIEPKWQVAGRLIQEIRTAVEQKELTPLDGARLISSI
Ga0134080_103073481	3300010333	Grasslands Soil	MTFVIRSPTEGGLFMAETVTPSLVRQFASMKPTEFGPAIEPKWKVADTLVKQVRTAVEKGQLTPRDGARVISSIAAT
Ga0134062_104850031	3300010337	Grasslands Soil	MAGAVNASLVHQFASMKPTEFGATIEPKWQVADKLVKDVRLAVEKEQLTPLDGARVISSIAATLFGYDEF
Ga0126377_128450611	3300010362	Tropical Forest Soil	MVQQFASMKPNEFGPTIEPKWQLCEGLVKEVRSGVEKGQLTPLDGARVIS
Ga0126381_1044163061	3300010376	Tropical Forest Soil	MATATGSLVHQYASMKPAEFGSAIEPKWQLGERLIKEVRISVEKQQVTPLDGARLIS
Ga0126383_134078662	3300010398	Tropical Forest Soil	MATATSSLVQQFATMKPAEFGPAIEPKWQLGERLIKEVRVSVEKQQVTPLDGARLIASVAATLFG
Ga0137393_101719002	3300011271	Vadose Zone Soil	MGSLVHQFASMKPAEFGSAIEPKWQLCDRLVKEVRAAVEKQQVTPLDGARVISSITATLF
Ga0137364_110994831	3300012198	Vadose Zone Soil	MAGTVTGSLVQQFASMKPTDFGPTIEPKWQVAERLLKEIRGAVEKQQLTPL
Ga0137383_104190291	3300012199	Vadose Zone Soil	MAATVTPSLVQQFASMKPADFGRTIEPKWQVAQRLVKEIEGAVEKEHLTPLDGARTISAVAATL
Ga0137383_112115492	3300012199	Vadose Zone Soil	MAETVTRSLVQQFASMKPNEFGPAIEPKWQLGERLIKEVKTSVEKAQVTPLDGARLI
Ga0137365_107586641	3300012201	Vadose Zone Soil	MAATVTPSLVQQFASMKPTDFGRTIEPKWQVAQRLTKEIQSGVEKEHLTPLDG
Ga0137374_100868522	3300012204	Vadose Zone Soil	MAATVTPSLVQQFASIKPADFRRTIEPKWQVAQRLVKEIEGAVEKEHLTPLNGARTISAIVANFGRFSESSCA*
Ga0137380_106003042	3300012206	Vadose Zone Soil	MAATVTASLVQQFASMKPTDFGRTIEPKWQVAQRLVKEIQSGVEKEHLTPLDGARTISAVAATLFGYDEF
Ga0137381_105478992	3300012207	Vadose Zone Soil	MAETVTPSLVHQFASMKPTDFGRTIEPKWQVAGKLVQEVKGAVEQKQLTPLDGARL
Ga0137381_113483091	3300012207	Vadose Zone Soil	MAETVTRSLVQQFASMKPNEFGPAIEPKWQLGERLIKEVKTSVEKAQVTPLDGARLISSIAATLFG
Ga0137376_113818071	3300012208	Vadose Zone Soil	MPEMVTHSLVHQFAAMKPMEFGATIEPKWQVADRLVKQIRSAVEHKQLTPLDGAGSFPRSRR
Ga0137379_118258811	3300012209	Vadose Zone Soil	MAETVTASLVQQFAKMKPSEFGATIEPKWKVGERLVKEVRSAVEQQHLTPLDGA
Ga0137377_116385461	3300012211	Vadose Zone Soil	MAATVTHSLVQQFASMKPAEFGRTIEPKWQVAQRLVKEIQGAVEKEQLTPLDGARTISAVAATLFG
Ga0137372_104834731	3300012350	Vadose Zone Soil	MAATVTASLVQQFASMKPTDFARTIEPKWQVGQKLVKEIQGAVEKEHLTPLDGAR
Ga0137367_111613221	3300012353	Vadose Zone Soil	MAATVTPSLVQQFASMKPADFRRTMEPKWQVAQRLVKEIEGAVEKEHLTPLDGARTISAV
Ga0137366_107077822	3300012354	Vadose Zone Soil	MAATVTPSLVQQFASMKPADFGRTIEPKWQVAQRLVKEIEGAVEKEHLTPLDGAR
Ga0137366_108065471	3300012354	Vadose Zone Soil	MPGTVTASLVQQFASMKPTDFGPAIEPKWQLAERLVTEVRTAVEKQHLTPLDGARVISSITATLFGYDE
Ga0137369_104220501	3300012355	Vadose Zone Soil	MAGTVTHHSLVHQFAAMKPTEFGATIEPKWQVADKLVKEVRSAVEKQQLTP
Ga0137371_110301452	3300012356	Vadose Zone Soil	MAATVTPSLVQQFASMKPADFGRTIELKWQVAQRLVKEIQGAVEKEQLAPLDGARTISAVAATLFGYD
Ga0137375_100559603	3300012360	Vadose Zone Soil	MAGTVTHSLVHQFAAMKPTEFGATIEPKWQVADKLVKEVRSAVEKQQLT
Ga0137407_113051432	3300012930	Vadose Zone Soil	MAGTVTGSLVQQFASMKPAEFGHAIEPKWQLGERLVKEVRVAVEKQQVSPLDGARVISSITA
Ga0126375_106091151	3300012948	Tropical Forest Soil	MATTVTHSLVQQFASMKPNEFGPNIEPKWQVGERLLKEVKVSVEKGYLTPLDGARLISSITATLFGYDEF
Ga0134087_101016611	3300012977	Grasslands Soil	MAATVTPSLVQQFASMKPADFGRTIEPKWQVAQRLVKEIQGGVEKGHLTPLDGARTISAV
Ga0132257_1032885602	3300015373	Arabidopsis Rhizosphere	MATTVTHSLVQQFASMKPNEFGPTIEPKWQVGERLLKEVKSSVEKGYLTPLDGARLISSI
Ga0184605_103618461	3300018027	Groundwater Sediment	MAETVTPSLVRQFASMKPAEFGPAIEPKWKVADTLMKQVRLAVEKEQLTPLDGARVISSI
Ga0190265_122356901	3300018422	Soil	MAATVSHSLVQQFASMKPNEFGPTIEPKWQVGERLIKEVRTAVEKQYLTPLDGARV
Ga0066655_108055212	3300018431	Grasslands Soil	MAETVTPSLVRQFASMKPTEFGPAIEPKWKVADTLVKQVRTAVEKEQLTPLDGARVISSI
Ga0066667_113642912	3300018433	Grasslands Soil	MAATVTPSLVQQFASMKPTDFGRTIEPKWQVAQRLVKEIQGAVEKEHLTPLDGARTISAVAA
Ga0066662_112320841	3300018468	Grasslands Soil	MAATVTPSLVQQFASMKPADFGRTIEPKWQVAQRLVKEIQGGVEKGHLTPLDGA
Ga0190270_112005592	3300018469	Soil	MATTVTHSLVQQFASMKPNEFGPNIEPKWQVGERLLKEVKLSVEKGFLTPLDGARLISSITA
Ga0190264_105348182	3300019377	Soil	MAGTVTASLVQQFASMKPTEFGPAIEPKWQLADRLVKEVRASVEKQHVTPLDGARVISSITATLFGYDEF
Ga0207660_102890681	3300025917	Corn Rhizosphere	MAGTASGSLVQQFAAMKPTEFGSAIEPKWQVGERLVKEVRSAVEKQHLSPLDG
Ga0207704_107553132	3300025938	Miscanthus Rhizosphere	MAATVTHSLVQQFASMKPNEFGPMIEPKWQVGERLLKEVKASVEKGHLTPLDGARVISS
Ga0209266_12810081	3300026327	Soil	MAATVTPSLVQQFASMKPADFAATIEPKWQVAQRLVKEIQGAVEKGHLTPLDGARTISAVAATLFG
Ga0209803_12093641	3300026332	Soil	MAGAVTHSLVHQFASMKPTEFGATIEPKWQVADKLVKEVRIAVEKQQLTPLDGARVISSIAATLFGY
Ga0209156_102586402	3300026547	Soil	MAGAVTHSLVHQFASMKPTEFGATIEPKWQVADKLVKEVRTAVEKQQLTPLDGARVISS
Ga0209846_10746362	3300027277	Groundwater Sand	MAATVTHSLVQQFASMKANEFGPTIEPKWQVGERLLKEVKLSVEKAYLTPLDGARLISSITATLFGYDE
Ga0209859_10347791	3300027954	Groundwater Sand	MAATVTHSLVQQFASMKANEFGPTIEPKWQVGERLLKEVKLSVEKGYLTPLDGARLISSITATLFGYD
Ga0307317_100155601	3300028720	Soil	MAATVTPSLVQQFASMKPADFAATIEPKWQVAQRLVKEIQGAVEKGHLTPLDGAR
Ga0307290_100304514	3300028791	Soil	MAATVTPSLVQQFASMKPADFAATIEPKWQVAQRLVKEIQGAVEKGHLTPLDGARTISAVAATL
Ga0307312_103509021	3300028828	Soil	MPGTVTASLVQQFASMKPTEFAPTIEPKWQVAERLVKEVKSAVEKQQLTPLD
Ga0307278_104883291	3300028878	Soil	MAETVTPSLVRQFASMKPTEFGPAIEPKWKVADTLMKQVRIAVEKEQLTPL
Ga0310813_104632201	3300031716	Soil	MAGAVTHSLVHQFAAMKPAEFGATIEPKWQVADKLVKEVRTAVEKQQLTP
Ga0310813_117961401	3300031716	Soil	MAATVTSSLVQQFASMKPADFAATIEPKWQVAQRLVKEIQGAVEKGHLTPLD
Ga0318535_103551262	3300031764	Soil	MPGVVTHSLVQQFASMKPTEFASAIEPKWQLGERLIKEVRTSVEKQQVTPLDGARVISS
Ga0318568_108334251	3300031819	Soil	MPGVVTHSLVQQFASMKPTEFASAIEPKWQLGERLIKEVRTSVEKQQVTPLDGARVI
Ga0306920_1029900471	3300032261	Soil	MAATVTHSLVQQFASMKPDEFGPTIEPKWQVGERLLKEVRLSVEKGYLTPLDGARLISSISATLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099029

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences