Metagenome / Metatranscriptome Family F098958

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098958
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	96 residues
Representative Sequence	MPRALVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWLRGSARYWPYEGPVSPYLNPHTAPPSTLK
Number of Associated Samples	94
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.45 %
% of genes near scaffold ends (potentially truncated)	26.21 %
% of genes from short scaffolds (< 2000 bps)	75.73 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.476 % of family members)
Environment Ontology (ENVO)	Unclassified (23.301 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (28.155 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.84% β-sheet: 11.90% Coil/Unstructured: 68.25%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00578	AhpC-TSA	37.86
PF01565	FAD_binding_4	36.89
PF02913	FAD-oxidase_C	4.85
PF13534	Fer4_17	4.85
PF00107	ADH_zinc_N	3.88
PF08240	ADH_N	0.97
PF12697	Abhydrolase_6	0.97
PF07690	MFS_1	0.97
PF01436	NHL	0.97
PF01566	Nramp	0.97
PF13823	ADH_N_assoc	0.97
PF08031	BBE	0.97
PF04794	YdjC	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	5.83
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.97
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	59.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	59.22 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	59.22 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	57.28 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	57.28 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Unclassified	root	N/A	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003321\|soilH1_10219991	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300004052\|Ga0055490_10064880	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300004156\|Ga0062589_101533225	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300004463\|Ga0063356_100531933	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300005171\|Ga0066677_10454512	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005176\|Ga0066679_10002338	All Organisms → cellular organisms → Bacteria	8028	Open in IMG/M
3300005332\|Ga0066388_102744631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	899	Open in IMG/M
3300005454\|Ga0066687_10179578	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005459\|Ga0068867_102391616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300005544\|Ga0070686_101434826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300005557\|Ga0066704_10010090	All Organisms → cellular organisms → Bacteria	5173	Open in IMG/M
3300005577\|Ga0068857_100855943	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300005841\|Ga0068863_101574864	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300006800\|Ga0066660_11242305	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006844\|Ga0075428_100012244	All Organisms → cellular organisms → Bacteria	9538	Open in IMG/M
3300006845\|Ga0075421_100041013	All Organisms → cellular organisms → Bacteria	5866	Open in IMG/M
3300006845\|Ga0075421_101423648	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006847\|Ga0075431_100761713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300006852\|Ga0075433_11379903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300006853\|Ga0075420_101761113	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006854\|Ga0075425_100078309	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300006871\|Ga0075434_100245927	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300006876\|Ga0079217_10300755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	889	Open in IMG/M
3300006880\|Ga0075429_100396955	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300006880\|Ga0075429_100577845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	985	Open in IMG/M
3300006903\|Ga0075426_10001844	All Organisms → cellular organisms → Bacteria	15119	Open in IMG/M
3300007004\|Ga0079218_10039675	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300007076\|Ga0075435_100973382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300009147\|Ga0114129_10212684	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300009156\|Ga0111538_10484863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1567	Open in IMG/M
3300010359\|Ga0126376_13062382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300010397\|Ga0134124_10689463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1010	Open in IMG/M
3300010399\|Ga0134127_11121362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	851	Open in IMG/M
3300010401\|Ga0134121_10487637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1132	Open in IMG/M
3300010403\|Ga0134123_10279124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1470	Open in IMG/M
3300011419\|Ga0137446_1036281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1066	Open in IMG/M
3300012355\|Ga0137369_10235516	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300012922\|Ga0137394_10252245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1508	Open in IMG/M
3300012930\|Ga0137407_10068730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2942	Open in IMG/M
3300014320\|Ga0075342_1166943	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300014326\|Ga0157380_12693870	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300015245\|Ga0137409_10063771	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300017966\|Ga0187776_10654640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300018000\|Ga0184604_10152175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300018027\|Ga0184605_10112253	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300018028\|Ga0184608_10039744	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300018031\|Ga0184634_10008200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3620	Open in IMG/M
3300018031\|Ga0184634_10192969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	926	Open in IMG/M
3300018053\|Ga0184626_10026909	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300018054\|Ga0184621_10194866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300018056\|Ga0184623_10112896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1257	Open in IMG/M
3300018059\|Ga0184615_10070380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1956	Open in IMG/M
3300018059\|Ga0184615_10477710	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300018063\|Ga0184637_10049504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2562	Open in IMG/M
3300018074\|Ga0184640_10040416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1894	Open in IMG/M
3300018075\|Ga0184632_10169027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	965	Open in IMG/M
3300018077\|Ga0184633_10078996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1691	Open in IMG/M
3300018078\|Ga0184612_10094540	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300018079\|Ga0184627_10109210	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300018082\|Ga0184639_10472007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300020004\|Ga0193755_1008453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3357	Open in IMG/M
3300020018\|Ga0193721_1046387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1146	Open in IMG/M
3300021073\|Ga0210378_10110133	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1071	Open in IMG/M
3300021081\|Ga0210379_10259537	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	756	Open in IMG/M
3300021090\|Ga0210377_10176915	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300022195\|Ga0222625_1528071	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300022694\|Ga0222623_10031229	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2021	Open in IMG/M
3300025318\|Ga0209519_10027523	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300025324\|Ga0209640_10547352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	939	Open in IMG/M
3300025971\|Ga0210102_1070301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300026309\|Ga0209055_1040385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2065	Open in IMG/M
3300026312\|Ga0209153_1025422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1987	Open in IMG/M
3300026532\|Ga0209160_1076992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1776	Open in IMG/M
3300027695\|Ga0209966_1158175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300027880\|Ga0209481_10004004	All Organisms → cellular organisms → Bacteria	6181	Open in IMG/M
3300027886\|Ga0209486_10264824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	999	Open in IMG/M
3300027909\|Ga0209382_10016727	All Organisms → cellular organisms → Bacteria	8944	Open in IMG/M
3300027909\|Ga0209382_10071873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4089	Open in IMG/M
3300028809\|Ga0247824_10826583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300028812\|Ga0247825_10168026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1509	Open in IMG/M
3300030006\|Ga0299907_10300599	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300030336\|Ga0247826_11543459	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031229\|Ga0299913_10054670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3822	Open in IMG/M
3300031548\|Ga0307408_100056349	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300031548\|Ga0307408_101068776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	747	Open in IMG/M
3300031716\|Ga0310813_10048893	All Organisms → cellular organisms → Bacteria	3103	Open in IMG/M
3300031852\|Ga0307410_11854963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300031892\|Ga0310893_10483258	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300031911\|Ga0307412_10737624	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300031944\|Ga0310884_10563621	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031949\|Ga0214473_10767603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1043	Open in IMG/M
3300031949\|Ga0214473_11219464	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300031995\|Ga0307409_101264963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300032174\|Ga0307470_11464926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300032205\|Ga0307472_100113691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1896	Open in IMG/M
3300032205\|Ga0307472_100497432	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300033412\|Ga0310810_10972238	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300033550\|Ga0247829_10093129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2248	Open in IMG/M
3300033550\|Ga0247829_10189682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1627	Open in IMG/M
3300034090\|Ga0326723_0421240	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300034177\|Ga0364932_0389504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300034178\|Ga0364934_0080714	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.84%
Host-Associated	Host-Associated	28.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.57%
Plants	Host-Associated → Plants	28.16%
Aquatic	Environmental → Aquatic	24.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.30%
Sediment	Environmental → Aquatic → Sediment	18.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.85%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Marine	Environmental → Aquatic → Marine	1.94%
Floodplain	Environmental → Terrestrial → Floodplain	1.94%
Peat	Environmental → Terrestrial → Peat	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	16.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH1_102199911	3300003321	Sugarcane Root And Bulk Soil	LLLAVASVATAQNFAPPSAAPPARPGAPAATICSTEWGWCPLQAVSAPGGGCYCHVPPSTWLPGIARYWPYEGPVSPYLNPHTAPPSTLK*
Ga0055490_100648802	3300004052	Natural And Restored Wetlands	VTSPATAQNFAPKPPPVVGPGAPPATICSTDYGWCPIQTVTLAGGFCYCFVPPNTWLPGLARYWPYRGPVSPYLNPHQAPPSTLR*
Ga0062589_1015332251	3300004156	Soil	GEGAAGHGAIVVHMRRVVMAVALVLAVSTLATAQNFAPQPPPVARPGAPQATICSTEWGWCPLQAVAAPGGGCYCFIPPSTWLAGSARYWPYEGPVSPYLNPHTGPPPTLK*
Ga0063356_1005319333	3300004463	Arabidopsis Thaliana Rhizosphere	VLTVVVLALAAAAPATAQNFGPRPPPVVRPGAPAATICSTDYGWCPLQAVAAPGGFCYCFVPPGTWLPGLARYWPYEGPVSPYLNPHQAPPSTIP*
Ga0066677_104545122	3300005171	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVSRPGGPAATICSTDWGWCPVQTVAAPGGGCWCFVPPATWLPGSARYWPYEGAVSPYLNPHMAPPSTLR*
Ga0066679_100023388	3300005176	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVPRPGGPAATICSTDWGWCPVQTVVTPGGGCWCFVPPTTWLPGSARYWPYEGAVSPYLNPHTAPPSTLR*
Ga0066388_1027446312	3300005332	Tropical Forest Soil	MPRLVIVAALALAIALLATAENFAAPPAPPFAGSPPATICSTDWGWCPLQVVTPPGGACYCFVPPSTWLPGSARYWPYQGPVSPYLNPHTGPPSTLK*
Ga0066687_101795782	3300005454	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVSRPGGPAATICSTDWGWCPVQTVAAPGGGCWCFVPPATWLPGSSRYWPYEGAVSPYLNPHMAPPSTLR*
Ga0068867_1023916161	3300005459	Miscanthus Rhizosphere	PVMAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGFCYCFVPPNTWLPGLARYWPYEGPVSPYLNPHQAPPSTIR*
Ga0070686_1014348261	3300005544	Switchgrass Rhizosphere	MLRVVFAAVLAVVVATPVMAQNFAPQPPPVVRPGAPSATICSTDYGWCPIQAVAPAGGFCYCFVPPSTWLPGLARHWRYEGPVSPYLNPHQAPPSTIR*
Ga0066704_100100906	3300005557	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVPRPGGPVATICSTDWGWCPVQTVVTPGGGCWCFVPPTTWLPGSARYWPYEGAVSPYLNPHTAPPSTLR*
Ga0068857_1008559432	3300005577	Corn Rhizosphere	MVRVLFVAVLALAVATPVPAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTLGGGFCYCFVPPNTWLPGLARYWPYEGPVSPYLNPHQAPPSTIR*
Ga0068863_1015748642	3300005841	Switchgrass Rhizosphere	MAVALVLAVSTLATAQNFAPQPPPVARPGAPQATICSTEWGWCPLQAGAAPGGGCYCFIPPSTWLAGSARYWPYEGPVSPYLNPHTGPPPTLK*
Ga0066660_112423052	3300006800	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVPRPGGPAATICSTDWGWCPVQTVVTPGGGCWCFVPPTTWLPGSARYWPYEGAV
Ga0075428_10001224411	3300006844	Populus Rhizosphere	MRRAVIAALLSLAGVAPALAQNFAPPLPPPVARPGAPAATICSTDYGWCPIQTVTAPGGSCYCFVPPGTWLPGLARYWPYQGPASPYLNPHQAPPSTLR*
Ga0075421_1000410133	3300006845	Populus Rhizosphere	VLFVTVIVLAAVGPAAAQNFAPHPPPVVRPGAPAATICSTDYGWCPLQAVAAAGGYCYCFVPPSTYLPGLARYWLYEGPVSPYLNPHQAPPSTIR*
Ga0075421_1014236482	3300006845	Populus Rhizosphere	MVRFLFAAVLALLAVAPASAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGQCYCFVPPNTWLRGLARYWPYEGPVSPYLNPHQGPPATLR*
Ga0075431_1007617131	3300006847	Populus Rhizosphere	VVPLAGAQNFAPQPSPPPRVGAPAATICSTDWGWCPLQALAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0075433_113799031	3300006852	Populus Rhizosphere	AGHGAIVDPMRALAMACLLVLVVVPLAGAQNFAPQPSPPPRVGAPAATICSTDWGWCPLQALAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0075420_1017611132	3300006853	Populus Rhizosphere	VLTVLVLALAAAAPATAQNFGPRPPPVVRPGAPAATICSTDYGWCPLQAVAAPGGFCYCFVPPGTWLPGLARYWPYEGP
Ga0075425_1000783095	3300006854	Populus Rhizosphere	MACLLVLAVVPLAGAQNFAPQPPRPPRVGAPAATICSTDWGWCPLQTLAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0075434_1002459272	3300006871	Populus Rhizosphere	MRALAMACLLVLVVVPLAGAQNFAPQPSPPPRVGAPAATICSTDWGWCPLQALAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0079217_103007552	3300006876	Agricultural Soil	MRRALIAAVLVLVAAAPVLAQNFAPQPPPRPAARGGPQATICSTDYGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSPYLNPHTGPPPTLR*
Ga0075429_1003969552	3300006880	Populus Rhizosphere	MPRVLFVTVIVLAAVGPAAAQNFAPHPPPVVRPGAPAATICSTDYGWCPLQAVAAAGGYCYCFVPPSTYLPGLARYWLYEGPVSPYLNPHQAPPSTIR*
Ga0075429_1005778453	3300006880	Populus Rhizosphere	MRALAMACLLVLAVVPLAGAQNFAPQPPRPPRVGAPAATICSTDWGWCPLQALAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0075426_1000184417	3300006903	Populus Rhizosphere	MRRVLAVGALLLVVAGPALAQNFAPPPTPAKSGGPAATICSTDWGWCPIQTVAMPGGACWCFVPPSTWLPGSARYWPYQGEVSPYLNPHTAPPSTLR*
Ga0079218_100396752	3300007004	Agricultural Soil	MLRALIVAVLALAVAPPAFAQNFAPRATPPPRASVGGPQATICSTDWGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSPYLNPHTGPPPTLR*
Ga0075435_1009733821	3300007076	Populus Rhizosphere	DCEEAAGHGAIVDPMRALAMACLLVLVVVPLAGAQNFAPQPSPPPRVGAPAATICSTDWGWCPLQALAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0114129_102126843	3300009147	Populus Rhizosphere	MRGLAMACLLVLAVVPLAGAQNFAPQPSPPPRVGAPAATICSTDWGWCPLQALAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0111538_104848632	3300009156	Populus Rhizosphere	MPRVLFVTVIVLAAVGPAAAQNFAPHPPPVVRPGAPAATICSTDYGWCPLQAVAAAGGYCYCFVPPSTYLPGLARYWLYEGPVSPYLNPHQAPPSTLR*
Ga0075423_101468732	3300009162	Populus Rhizosphere	AAAVERLDAEAGRGGRRLGPGRDCQEQRDCEEAAEHGAIVDPMRALAMACLLVLAVVPLAGAQNFAPQPPRPPRVGAPAATICSTDWGWCPLQTLAAPGGGCYCFVPPSTWLAGSARYWPYEGPVSPYLNPHTGPPSTIR*
Ga0126376_130623821	3300010359	Tropical Forest Soil	MPRLVIVAALALAIALLATAENFAAPPAAPFAGSPPATICSTDWGWCPLQVVTPPGGACYCFVPPSTWLPGSARYWPYQGPVSPYLNPHTGPPSTLK*
Ga0134124_106894632	3300010397	Terrestrial Soil	MRRWCIVLLLLLASVSSAAAQNFAPQPPQRSRPPGAPQANICSTDYGWCPIQQVATPGGSCYCFVPPSSWLPGLARFWPYQGPVSPYLNPHETPPSTIR*
Ga0134127_111213621	3300010399	Terrestrial Soil	FVAVLALVAPTPVLAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGFCYCFVPPNTWLPGLARYWPYEGPVSPYLNPHQAPPTTIR*
Ga0134121_104876371	3300010401	Terrestrial Soil	MRRWCIALLLLLAGVSPAVAQNFAPQPSQRPRGPSGPQANICSTDYGWCPIQQVATPGGGCYCFVPPGSWLPGLARFWPYQGPVSPYLNPHETPPSTIR*
Ga0134123_102791242	3300010403	Terrestrial Soil	MVRALFVAVLALVAPTPVLAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPNTWLPGLARYWPYEGPVSPYLNPHQAPPTTIR*
Ga0137446_10362813	3300011419	Soil	MPRALTAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWIPGSARYWPYEGPVSPYLNPHTGPPSTLK*
Ga0137369_102355162	3300012355	Vadose Zone Soil	MPRALVAVLLLLVAASPALAQNFAPRPPPVIRPGAPAATICSTDYGWCPIQAVTTGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLR*
Ga0137394_102522451	3300012922	Vadose Zone Soil	MARALVVALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK*
Ga0137407_100687302	3300012930	Vadose Zone Soil	MRRWPIAVLLALAVAGSASAQNFAPQPPARPRPAGPQATICSTDYGWCPIQTVAAPGGSCYCFVPPGTWLAGSARYWPYEGPVSPYLNPHQVPPSTIR*
Ga0075342_11669431	3300014320	Natural And Restored Wetlands	MLRGLLAAVLAVALVSPAGAQNFAPAPPPVTRPGAPAATICSTDHGWCPIQTVTLAGGFCYCFVPPSTWLPGLARYWPYEGPVSPYLNPHQAPPSTLR*
Ga0157380_126938702	3300014326	Switchgrass Rhizosphere	AQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGFCYCFVPPNTWLPGLARHWRYEGPVSPYLNPHQAPPSTIR*
Ga0137409_100637715	3300015245	Vadose Zone Soil	MARALVVALLLLLGASPAPAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK*
Ga0187776_106546402	3300017966	Tropical Peatland	AAAPVLAQNFAPQPAPPPKAGGPAATICSTDWGWCPVQTVVTPGGACWCFVPPSTWLPGSARYWPYEGPVSPYLNPHVKPPSTLR
Ga0184604_101521752	3300018000	Groundwater Sediment	LAAVLALAAVSPAAAQNFAPQPPPVARPGAPAATICSTDYGWCPIQTVTLGGGQCYCFVPPNTWLPGLARYWPYEGPVSPYLNPHQGPPATLR
Ga0184605_101122532	3300018027	Groundwater Sediment	MPRAVVAALLLLLGASPALAQNFAPQAPPVIRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0184608_100397441	3300018028	Groundwater Sediment	AYSRPMARALVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPSTLK
Ga0184634_100082002	3300018031	Groundwater Sediment	MARALVAALLLLLGASSALAQNFAPQPPPVKRPGTPAATICSTDYGWCPIQAVATGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0184634_101929692	3300018031	Groundwater Sediment	MARALVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWLRGSARYWPYAGPVSPYLNPHTAPPSTLK
Ga0184626_100269092	3300018053	Groundwater Sediment	MAGALVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPSTLK
Ga0184621_101948662	3300018054	Groundwater Sediment	MPRAVVAALLLLLGASPALAQNFAPQPPPFVRPGSPAATICSTDYGWCPIQNVTTGGGSCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPATLK
Ga0184623_101128962	3300018056	Groundwater Sediment	MPRALVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWLRGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0184615_100703803	3300018059	Groundwater Sediment	MPRALTAALLLLLGASPALAQNFAPQPPPVVRPGSPQATICSTDYGWCPIQNVTTGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTGPPSTLK
Ga0184615_104777102	3300018059	Groundwater Sediment	MPRVLVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWIPGSARYWPYEGPVSPYLNPHTGPPSTLK
Ga0184637_100495042	3300018063	Groundwater Sediment	MARALVAVLLLLLGASSALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWLRGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0184640_100404162	3300018074	Groundwater Sediment	MLRALVAVLLLFLGAFPALAQNFAPQPPPVKRPGSPAATICSTDYGWCPIQAVATGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0184632_101690273	3300018075	Groundwater Sediment	MARALVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPSTLK
Ga0184633_100789961	3300018077	Groundwater Sediment	MLRALVAVLLLFLGAFPALAQNFAPQPPPVKGPGAPAATICSTDYGWCPIHAVATGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0184612_100945402	3300018078	Groundwater Sediment	MPRALVAVLLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQSVTTGGGSCYCFVPPGTWIPGSARYWPYAGPVSPYLNPHTAPPSTLK
Ga0184627_101092102	3300018079	Groundwater Sediment	MARALVAVLLLLLGASPALAQNFAPQPPPVVRPGSPVATICSTDYGWCPIQTVTTGGGSCYCFVPPGTWIPGSARYWPYAGPVSPYLNPHTAPPSTLK
Ga0184639_104720072	3300018082	Groundwater Sediment	MARALVAVLLLLLGASSALAQNFAPQPPPVVRPGSPVATICSTDYGWCPIQTVTTGGGSCYCFVPPGTWIPGSARYWPYAGPVSPYLNPHTAPPSTLK
Ga0193755_10084532	3300020004	Soil	MRRWPIAVLLALAVAGSASAQNFAPQPPARPRPAGPQATICSTDYGWCPIQTVAAPGGSCYCFVPPGTWLAGSARYWPYEGPVSPYLNPHQVPPSTIR
Ga0193721_10463871	3300020018	Soil	MPRAVVAALLLLLGASPALAQNFAPQAPPVIRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPATWISGSARYWPYEGPVS
Ga0210378_101101332	3300021073	Groundwater Sediment	MARALVAALLLLLGASPALAQNFAPQPPPFVRPGSPAATICSTDYGWCPIQNVTTGGGFCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPATLK
Ga0210379_102595372	3300021081	Groundwater Sediment	MARALVAVLLLLLGASPALAQNFAPQPPPVVRPGSPQATICSTDYGWCPIQTVTMGGGFCYCFVPPATWLRGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0210377_101769152	3300021090	Groundwater Sediment	MPRALVSVLLLLLGASPALAQNFAPQPPPVKRPGAPAATICSTDYGWCPIQAVATGGGFCYCFVPPGTWIPGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0222625_15280711	3300022195	Groundwater Sediment	ALLLLFGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQNVTTGGGSCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPATLK
Ga0222623_100312293	3300022694	Groundwater Sediment	MARALVAALLLLLGASPALAQNFAPQPPPFVRPGSPAATICSTDYGWCPIQNVTTGGGSCYCFVPPGTWIPGSARFWPYAGPVSPYLNPHTAPPATLK
Ga0209519_100275232	3300025318	Soil	MLRALTVAVLALATATPVTAQNFAPQPPPVARPGAPAATICSTDHGWCPLQVVAVPGGACYCFVPPNTWLPGLARYWPYVGPVSPYLNPHQAPPSTLR
Ga0209640_105473521	3300025324	Soil	LRALTVAVLALATATPVTAQNFAPQPPPVARPGAPAATICSTDHGWCPLQVVAVPGGACYCFVPPNTWLPGLARYWPYVGPVSPYLNPHQAPPSTLR
Ga0210102_10703012	3300025971	Natural And Restored Wetlands	MRRGLLAAVLALAVTSPATAQNFAPKPPPVVGPGAPPATICSTDYGWCPIQTVTLAGGFCYCFVPPNTWLPGLARYWPYRGPVSPYLNPHQAPPSTLR
Ga0209055_10403852	3300026309	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVPRPGGPAATICSTDWGWCPVQTVVTPGGGCWCFVPPTTWLPGSARYWPYEGAVSPYLNPHTAPPSTLR
Ga0209153_10254222	3300026312	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVSRPGGPAATICSTDWGWCPVQTVAAPGGGCWCFVPPATWLPGSARYWPYEGAVSPYLNPHMAPPSTLR
Ga0209160_10769923	3300026532	Soil	MPRVSAAVALLLLAAAPALAQNFAPRPPPVPRPGGPVATICSTDWGWCPVQTVVTPGGGCWCFVPPTTWLPGSARYWPYEGAVSPYLNPHTAPPSTLR
Ga0209966_11581752	3300027695	Arabidopsis Thaliana Rhizosphere	VLTVVVLALAAAAPATAQNFGPRPPPVVRPGAPAATICSTDYGWCPLQAVAAPGGFCYCFVPPGTWLPGLARYWPYEGPV
Ga0209481_100040042	3300027880	Populus Rhizosphere	MRRAVIAALLSLAGVAPALAQNFAPPLPPPVARPGAPAATICSTDYGWCPIQTVTAPGGSCYCFVPPGTWLPGLARYWPYQGPASPYLNPHQAPPSTLR
Ga0209486_102648242	3300027886	Agricultural Soil	MRRALIAAVLLLSAAAPALAQNFAPQPPPRPATRGGPQATICSTDYGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSPYLNPHTGPPPTLR
Ga0209382_100167273	3300027909	Populus Rhizosphere	VLFVTVIVLAAVGPAAAQNFAPHPPPVVRPGAPAATICSTDYGWCPLQAVAAAGGYCYCFVPPSTYLPGLARYWLYEGPVSPYLNPHQAPPSTIR
Ga0209382_100718733	3300027909	Populus Rhizosphere	VLTVVVLALAAAAPATAQNFGPRPPPVVRPGAPAATICSTDYGWCPLQAVAAPGGFCYCFVPPGTWLPGLARYWPYEGPVSPYLNPHQAPPSTIP
Ga0247824_108265831	3300028809	Soil	APASAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGQCYCFVPPNTWLRGLARYWPYEGPVSPYLNPHQGPPATLR
Ga0247825_101680261	3300028812	Soil	VAPASAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGQCYCFVPPNTWLRGLARYWPYEGPVSPYLNPHQGPPATLR
Ga0299907_103005991	3300030006	Soil	MHRLLVAAVLTLAVATPAMSQNFAPQPPPVLRPGAPTATICSTDYGWCPLKVVAAPGGVCNCFVPPGTWLRGLARYWPYEGP
Ga0247826_115434592	3300030336	Soil	FWAAAAPATAQNFGPRPPPVVRPGAPAATICSTDYGWCPLQAVAAPGGFCYCFVPPGTWLPGLARYWPYQGPVSPYLNPHQAPPSTIP
Ga0299913_100546703	3300031229	Soil	VLAVAVLALAAAGPARAQNFAPKPPPVARPGAPAATICSTDHGWCPLQVVALPGGACYCFVPPATWLPGLARYWPYEGPVSPYLNPHQAPPSTLR
Ga0307408_1000563492	3300031548	Rhizosphere	MRRALIAAVLVLAAAAPALAQNFAPQPPPRAAARGGPQATICSTDYGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSPYLNPHTGPPPTLR
Ga0307408_1010687762	3300031548	Rhizosphere	MALLVVAAAVPAASAQNFAPQAPRPPRAGGPVATICSTDWGWCPVQTVVTPGGSCYCFVPPGTWLAGSARYWPYQGPVSPYLNPHTGPPPTLK
Ga0310813_100488932	3300031716	Soil	VLLLLLASVSSAAAQNFAPQPPQRSRPPGAPQANICSTDYGWCPIQQVATPGGSCYCFVPPSSWLPGLARFWPYQGPVSPYLNPHETPPSTIR
Ga0307410_118549632	3300031852	Rhizosphere	MRRALIAAVLVLAAAAPALAQNFAPQPPPRAAARGGPQATICSTDYGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSP
Ga0310893_104832581	3300031892	Soil	MVCVVFAAVLAVVVATPVMAQNFAPQPPPVVRPGAPSATICSTDYGWCPIQAVAPAGGFCYCFVPPSTWLPGLARHWRYEGPVSPYLNPHQAPPSTIR
Ga0307412_107376242	3300031911	Rhizosphere	MRRALIAAVLVLAAAAPALAQNFAPQPPPRAAARGGPQATICSTDYGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSPYLNPHIGPPPTLR
Ga0310884_105636212	3300031944	Soil	MLRVVFAAVLAVVVATPVMAQNFAPQPPPVVRPGAPSATICSTDYGWCPIQAVAPAGGFCYCFVPPSTWLPGLARHWRYEGPVSPYLNPHQAPPSTIR
Ga0214473_107676033	3300031949	Soil	MPRALVSVLLLLLGASPALAQNFAPQPPPVKRPGAPAATICSTDYGWCPIQAVATGGGFCYCFVPPGTWIPGSARYWPYEG
Ga0214473_112194642	3300031949	Soil	MPRVLVAALLLLLGASPALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQTVTTGGGFCYCFVPPATWISGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0307409_1012649631	3300031995	Rhizosphere	PAGHDAYSSPMRRALIAAVLVLAAAAPALAQNFAPQPPPRAAARGGPQATICSTDYGWCPAHTVVTPGGFCYCFVPPNTWLPGSARYWPYEGRVSPYLNPHIGPPPTLR
Ga0307470_114649261	3300032174	Hardwood Forest Soil	MPRLVSVVGLLLTLAVPAQAQNFAPRPPPVQRPGAPQATICSTDYGWCPLQIVATPGGVCYCFVPPGTWLAGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0307472_1001136911	3300032205	Hardwood Forest Soil	MPRLVSVVGLLLTLAVPAQAQNFAPRPPPVQRPGAPQATICSTDYGWCPLQIVATPGGVCYCFVPPGTWLAGSARYWPYEGPVSPYLN
Ga0307472_1004974322	3300032205	Hardwood Forest Soil	MRRVVMAVVLLLASAPLADAQNFAPQPPAPKKPAGPAATICSTDYGWCPIQIVVTAGGGCYCFVPPNTWLAGSARYWPYEGPVSPYLNPHTAPPSTLK
Ga0310810_109722382	3300033412	Soil	MRRVVMAVALILAVSTLATAQNFAPQPPPVARPGAPQATICSTEWGWCPLQAVAAPGGGCYCFIPPSTWLAGSARYWPYEGPVSPYLNPHTGPPPTLK
Ga0247829_100931293	3300033550	Soil	MVRVLFAAALALLSVAPASAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGQCYCFVPPNTWLRGLARYWPYEGPVSPYLNPHQGPPATLR
Ga0247829_101896822	3300033550	Soil	MVRFLFAAVLALLAVAPASAQNFAPQPPPVVRPGAPAATICSTDYGWCPIQTVTLGGGQCYCFVPPNTWLRGLARYWPYEGPVSPYLNPHQGPPATLR
Ga0326723_0421240_290_586	3300034090	Peat Soil	MRRWLIAVLLALAAAGSASAQNFAPQPPARPRPGGPQANICSTDYGWCPIQTVAAPGGSCYCFVPPTTWLAGSARYWPYEGPVSPYLNPHQVPPSTIR
Ga0364932_0389504_3_275	3300034177	Sediment	MRRVFIAAVLTLAAAAPALAQNFAPAPPPRPRVSGPQATICSTDWGWCPMHTVATPGGGCYCFVPPSTWLQGSARYYPYQGPVSPYLNPHM
Ga0364934_0080714_300_596	3300034178	Sediment	MARALVAALLLLLGASSALAQNFAPQPPPVVRPGSPAATICSTDYGWCPIQAVATGGGFCYCFVPPATWISGSARYWPYAGPVSPYLNPHTAPPSTLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences