NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098931

Metagenome Family F098931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098931
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 69 residues
Representative Sequence MGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCETCQGEGAIFEEEDDEDL
Number of Associated Samples 80
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 84.47 %
% of genes near scaffold ends (potentially truncated) 26.21 %
% of genes from short scaffolds (< 2000 bps) 74.76 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.757 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(25.243 % of family members)
Environment Ontology (ENVO) Unclassified
(78.641 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.553 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 24.29%    Coil/Unstructured: 75.71%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF05565Sipho_Gp157 30.10
PF05866RusA 4.85
PF16778Phage_tail_APC 0.97
PF13730HTH_36 0.97
PF06414Zeta_toxin 0.97
PF13884Peptidase_S74 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 4.85


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.76 %
All OrganismsrootAll Organisms25.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10018733Not Available3662Open in IMG/M
3300000117|DelMOWin2010_c10040645Not Available2152Open in IMG/M
3300000947|BBAY92_12249677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1240Open in IMG/M
3300000949|BBAY94_10081582Not Available890Open in IMG/M
3300000973|BBAY93_10021501Not Available1718Open in IMG/M
3300003409|JGI26088J50261_1081253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus ruber539Open in IMG/M
3300003580|JGI26260J51721_1026233All Organisms → Viruses → Predicted Viral1106Open in IMG/M
3300005747|Ga0076924_1047606All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1654Open in IMG/M
3300006029|Ga0075466_1046957Not Available1286Open in IMG/M
3300006029|Ga0075466_1072457Not Available972Open in IMG/M
3300006029|Ga0075466_1115449Not Available716Open in IMG/M
3300006802|Ga0070749_10292160All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300006810|Ga0070754_10036284All Organisms → Viruses → Predicted Viral2708Open in IMG/M
3300006916|Ga0070750_10021853Not Available3243Open in IMG/M
3300006916|Ga0070750_10339466All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300006919|Ga0070746_10047143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2258Open in IMG/M
3300006920|Ga0070748_1192067Not Available748Open in IMG/M
3300007345|Ga0070752_1151169Not Available954Open in IMG/M
3300007540|Ga0099847_1254304Not Available503Open in IMG/M
3300007542|Ga0099846_1098121Not Available1080Open in IMG/M
3300008012|Ga0075480_10196930Not Available1067Open in IMG/M
3300009071|Ga0115566_10502983Not Available687Open in IMG/M
3300009071|Ga0115566_10528432Not Available666Open in IMG/M
3300009074|Ga0115549_1044033Not Available1619Open in IMG/M
3300009423|Ga0115548_1067490All Organisms → Viruses → Predicted Viral1224Open in IMG/M
3300009433|Ga0115545_1044393Not Available1731Open in IMG/M
3300009435|Ga0115546_1246537Not Available613Open in IMG/M
3300009438|Ga0115559_1095017Not Available1172Open in IMG/M
3300009438|Ga0115559_1146893Not Available879Open in IMG/M
3300009443|Ga0115557_1151003Not Available940Open in IMG/M
3300009467|Ga0115565_10276361Not Available766Open in IMG/M
3300009495|Ga0115571_1150719Not Available975Open in IMG/M
3300009496|Ga0115570_10065535Not Available1871Open in IMG/M
3300009496|Ga0115570_10123377Not Available1238Open in IMG/M
3300009497|Ga0115569_10060878All Organisms → Viruses → Predicted Viral2034Open in IMG/M
3300009507|Ga0115572_10437169Not Available730Open in IMG/M
3300009508|Ga0115567_10302661Not Available1002Open in IMG/M
3300009508|Ga0115567_10511889Not Available729Open in IMG/M
3300009508|Ga0115567_10618967Not Available652Open in IMG/M
3300013010|Ga0129327_10180855Not Available1059Open in IMG/M
3300017710|Ga0181403_1008642All Organisms → Viruses → Predicted Viral2204Open in IMG/M
3300017725|Ga0181398_1000084Not Available25436Open in IMG/M
3300017743|Ga0181402_1171092Not Available545Open in IMG/M
3300017755|Ga0181411_1087159Not Available931Open in IMG/M
3300017760|Ga0181408_1011317Not Available2509Open in IMG/M
3300017760|Ga0181408_1127077Not Available659Open in IMG/M
3300018048|Ga0181606_10202749All Organisms → Viruses → Predicted Viral1151Open in IMG/M
3300020165|Ga0206125_10087652Not Available1353Open in IMG/M
3300020166|Ga0206128_1292615Not Available582Open in IMG/M
3300020173|Ga0181602_10183347Not Available940Open in IMG/M
3300020175|Ga0206124_10353585Not Available553Open in IMG/M
3300020182|Ga0206129_10009382Not Available9201Open in IMG/M
3300020182|Ga0206129_10417208Not Available501Open in IMG/M
3300020185|Ga0206131_10106294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1594Open in IMG/M
3300020187|Ga0206130_10001297Not Available37011Open in IMG/M
3300020188|Ga0181605_10253126Not Available763Open in IMG/M
3300020595|Ga0206126_10040567All Organisms → Viruses → Predicted Viral2655Open in IMG/M
3300021375|Ga0213869_10067279Not Available1814Open in IMG/M
3300021957|Ga0222717_10060758All Organisms → Viruses → Predicted Viral2429Open in IMG/M
3300021958|Ga0222718_10048777Not Available2704Open in IMG/M
3300022053|Ga0212030_1050591Not Available590Open in IMG/M
3300022061|Ga0212023_1025887Not Available805Open in IMG/M
3300022071|Ga0212028_1003658All Organisms → Viruses → Predicted Viral2038Open in IMG/M
3300022072|Ga0196889_1016329Not Available1576Open in IMG/M
3300022074|Ga0224906_1208632Not Available530Open in IMG/M
(restricted) 3300023112|Ga0233411_10160867Not Available734Open in IMG/M
3300024231|Ga0233399_1103913Not Available651Open in IMG/M
(restricted) 3300024518|Ga0255048_10183695All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300025543|Ga0208303_1026737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1574Open in IMG/M
3300025543|Ga0208303_1033677Not Available1344Open in IMG/M
3300025594|Ga0209094_1022894All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1932Open in IMG/M
3300025594|Ga0209094_1036180Not Available1380Open in IMG/M
3300025608|Ga0209654_1018065Not Available2706Open in IMG/M
3300025621|Ga0209504_1028793Not Available1956Open in IMG/M
3300025621|Ga0209504_1057795Not Available1152Open in IMG/M
3300025626|Ga0209716_1062050Not Available1182Open in IMG/M
3300025641|Ga0209833_1138374Not Available653Open in IMG/M
3300025704|Ga0209602_1073931All Organisms → Viruses → Predicted Viral1292Open in IMG/M
3300025704|Ga0209602_1136056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius amoyensis809Open in IMG/M
3300025769|Ga0208767_1011618Not Available5366Open in IMG/M
3300025806|Ga0208545_1046307Not Available1309Open in IMG/M
3300025879|Ga0209555_10335467Not Available569Open in IMG/M
3300025886|Ga0209632_10029024Not Available3827Open in IMG/M
3300025892|Ga0209630_10227504Not Available889Open in IMG/M
3300025892|Ga0209630_10266003Not Available796Open in IMG/M
3300025894|Ga0209335_10172708Not Available1022Open in IMG/M
3300025894|Ga0209335_10178308Not Available999Open in IMG/M
3300025897|Ga0209425_10071843Not Available2167Open in IMG/M
(restricted) 3300027996|Ga0233413_10437549Not Available575Open in IMG/M
3300028280|Ga0228646_1158147Not Available544Open in IMG/M
3300031539|Ga0307380_10001730Not Available31666Open in IMG/M
3300031539|Ga0307380_10088256Not Available3236Open in IMG/M
3300031566|Ga0307378_10062082Not Available4070Open in IMG/M
3300032251|Ga0316198_10347549Not Available833Open in IMG/M
3300032277|Ga0316202_10005161All Organisms → cellular organisms → Bacteria7340Open in IMG/M
3300032277|Ga0316202_10042525All Organisms → Viruses → Predicted Viral2149Open in IMG/M
3300032277|Ga0316202_10068130All Organisms → Viruses → Predicted Viral1655Open in IMG/M
3300032277|Ga0316202_10080694Not Available1508Open in IMG/M
3300032277|Ga0316202_10447705Not Available605Open in IMG/M
3300032373|Ga0316204_10096277All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2542Open in IMG/M
3300032373|Ga0316204_10842366Not Available656Open in IMG/M
3300034375|Ga0348336_063435All Organisms → Viruses → Predicted Viral1431Open in IMG/M
3300034418|Ga0348337_017314Not Available3788Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine25.24%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous22.33%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater7.77%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat6.80%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater6.80%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine5.83%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.88%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.91%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.91%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.91%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.91%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface2.91%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.94%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.94%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment0.97%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.97%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300000973Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93Host-AssociatedOpen in IMG/M
3300003409Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNAEnvironmentalOpen in IMG/M
3300003580Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNAEnvironmentalOpen in IMG/M
3300005747Seawater microbial communities from Vineyard Sound, MA, USA - control T14EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020188Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300024231Seawater microbial communities from Monterey Bay, California, United States - 43DEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025879Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028280Seawater microbial communities from Monterey Bay, California, United States - 58DEnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300032373Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1001873383300000117MarineMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEQDDEDL*
DelMOWin2010_1004064533300000117MarineMGRVKDIFQDQRERASVVCPDCDGDGKVVEVTYRRQSFSRDVGEPYEDPVECETCNGEGAIFEEQDDEDL*
BBAY92_1224967763300000947Macroalgal SurfaceMGRVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVECETCQGEGAIFVEEDDE
BBAY94_1008158253300000949Macroalgal SurfaceMGRVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVECETCQGEGAIF
BBAY93_1002150123300000973Macroalgal SurfaceMGRVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVECETCQGEGAIFVEEDDEDL*
JGI26088J50261_108125313300003409MarineMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVDCETCQGEGAIFEEEGDEDL*
JGI26260J51721_102623323300003580MarineMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVDCETCQGEGLVFVEEDDEDL*
Ga0076924_104760613300005747MarineMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEE
Ga0075466_104695753300006029AqueousMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFSRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL*
Ga0075466_107245723300006029AqueousMGRVKDIFQDQREKASVVCPECDGDGKVVEVTYRRQSFSRDVGEPYEDPVECETCNGEGAIFEEQEDEDL*
Ga0075466_111544923300006029AqueousMGRVKDIFQDQRERASVVCTECDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEQDDEDL*
Ga0070749_1029216013300006802AqueousIFQDQRERASVVCPECDGDGKVIEITYRVQSFDRDIGEPYEDPVECETCNGEGAIFKEQDDENL*
Ga0070754_1003628453300006810AqueousMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEENDEDL*
Ga0070750_1002185383300006916AqueousMGKVKDIFQDQRERASVVCPECDGDGKVVEITYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0070750_1033946623300006916AqueousMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCKRCQGEGAIFEEEDDEDL*
Ga0070746_1004714363300006919AqueousMGKVKDIFQDQRERASVVCPECDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0070748_119206743300006920AqueousMGKVKDIFQDQRERASVVCPECDGDGKVVKITYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDE
Ga0070752_115116923300007345AqueousMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVECETCNGEGAIFEEQDDEDL*
Ga0099847_125430423300007540AqueousMGRVKDIFQDQRERASVVCPECDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0099846_109812153300007542AqueousMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0075480_1019693013300008012AqueousLLPSVFLCGGFVMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEENDEDL*
Ga0115566_1050298323300009071Pelagic MarineMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE*
Ga0115566_1052843233300009071Pelagic MarineMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDDDL*
Ga0115549_104403353300009074Pelagic MarineVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE*
Ga0115548_106749033300009423Pelagic MarineMGRVKDIFQDQRERASVVCPECDGDGKVVEITYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0115545_104439343300009433Pelagic MarineMGKVKDIFQDQRERASVVCPDCDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL*
Ga0115546_124653713300009435Pelagic MarineMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQG
Ga0115559_109501713300009438Pelagic MarineQARGKQVMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0115559_114689313300009438Pelagic MarineMGKVKDIFQDQRERASVVCPECDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL*
Ga0115557_115100333300009443Pelagic MarineLLRQQARGKQVMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL*
Ga0115565_1027636113300009467Pelagic MarineMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCETCQGEGAIFEEEDDEDL*
Ga0115571_115071953300009495Pelagic MarineMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL*
Ga0115570_1006553523300009496Pelagic MarineMGRVKDIFQDQRERASMVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE*
Ga0115570_1012337753300009496Pelagic MarineMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDE*
Ga0115569_1006087823300009497Pelagic MarineMGKVKDIFQDQRERASKVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE*
Ga0115572_1043716923300009507Pelagic MarineMGKVKDIFQDQREKASKVCPECDGDGKVVEITYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEGQDDEDL*
Ga0115567_1030266133300009508Pelagic MarineFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL*
Ga0115567_1051188943300009508Pelagic MarineMGRVKDIFQDQRERASVVCPECDGDGKVVEITYRRQSFDRDIGEPYEDPVECETCNGEGAIFEG
Ga0115567_1061896723300009508Pelagic MarineMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE*
Ga0129327_1018085553300013010Freshwater To Marine Saline GradientMGKVKDIFQDQREKASKVCPECDGDGKVIETTYRVQSFSRDVGEPFEDPVDCETCQGEGAIFEEQDDEDL*
Ga0181403_100864263300017710SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVKITYRLQSFSRDIGEPYEDPVECETCQGEGAVFEEQDDEDL
Ga0181398_1000084253300017725SeawaterMGKVKDIFQDQREKASKVCPECDGDGKMIEITYKVQSFSRDIGEPYEDPIDCETCQGEGAVFEEQDDEDL
Ga0181402_117109223300017743SeawaterMGKVKDIFQDQREKASKVCPECDGDGKMIEITYKVQSFSRDIGEPYEDPIDCETCQGEGAVFEEQDDED
Ga0181411_108715923300017755SeawaterMGKVKNIFQDQRERASRVCPECDGDGKVIEITYKVQSFSRDIGEPYEDPVDCETCQGEGAVFVEEDDEDL
Ga0181408_101131783300017760SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVECETCQGEGAVFEEQDDEDI
Ga0181408_112707733300017760SeawaterMGKVKDIFQDQRERASVVCPECDGYGKVVEITYRVQSFSRDIGEPCEDPVECETCQGEGAVFVEEDDEDL
Ga0181606_1020274943300018048Salt MarshMGRVKDIFQDQREKASVVCPECDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEEDNEDL
Ga0206125_1008765233300020165SeawaterMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0206128_129261533300020166SeawaterMGKVKDIFQDQRERASVVCPECEGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDP
Ga0181602_1018334733300020173Salt MarshMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0206124_1035358513300020175SeawaterERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0206129_1000938213300020182SeawaterMGRVKDIFQDQRERASVVCPDCDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFKEQDDEDL
Ga0206129_1041720813300020182SeawaterVMGRVKDIFQDRRERASVVCPDCDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0206131_1010629463300020185SeawaterMGKVKDIFQDQRERASVVCPECEGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEE
Ga0206130_10001297203300020187SeawaterVMGKVKDIFQDQRERASVVCPECEGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDP
Ga0181605_1025312633300020188Salt MarshMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEEEDNEDL
Ga0206126_1004056743300020595SeawaterMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL
Ga0213869_1006727943300021375SeawaterMGRVKDIFQDQRERASVVCPDCDGDGKVVEVTYRRQSFSRDVGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0222717_1006075863300021957Estuarine WaterMGKVKDIFQDQRERASKVCPECDGDGKVVKITYRLQSFSRDIGEPYEDPVECETCQGEGAVFVEEDDEDL
Ga0222718_1004877743300021958Estuarine WaterMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL
Ga0212030_105059113300022053AqueousMGRVKDIFQDQREKASVVCPECDGDGKVVEVTYRRQSFSRDVGEPYEDPVECETCNGEGAIFEEQEDEDL
Ga0212023_102588733300022061AqueousMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFSRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL
Ga0212028_100365853300022071AqueousMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEENDEDL
Ga0196889_101632943300022072AqueousMGRVKDIFQDQRERASVVCTECDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0224906_120863233300022074SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVKITYRVQSFSRDIGEPYEDPVECETCQGEGAIFEEDDDEDL
(restricted) Ga0233411_1016086743300023112SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVDCETCQGEGLVFVEEDDEDL
Ga0233399_110391313300024231SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVKITYRVQSFSRDIGEPYEDPVECETCQGEGAVFVEEDDEDL
(restricted) Ga0255048_1018369533300024518SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVDCETCQGEGAVFVEEDDEDL
Ga0208303_102673723300025543AqueousMGKVKDIFQDQREKASKVCPECDGDGKVIETTYRVQSFSRDVGEPFEDPVDCETCQGEGAIFEEQDDEDL
Ga0208303_103367743300025543AqueousMGRVKDIFQDQRERASVVCPECDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0209094_102289413300025594Pelagic MarineGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE
Ga0209094_103618033300025594Pelagic MarineMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0209654_101806583300025608MarineMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVDCETCQGEGAIFVEDDDDDL
Ga0209504_102879323300025621Pelagic MarineMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE
Ga0209504_105779523300025621Pelagic MarineMGRVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0209716_106205023300025626Pelagic MarineMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL
Ga0209833_113837413300025641Pelagic MarineQARGKQVMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCETCQGEGAIFEEEDDEDL
Ga0209602_107393113300025704Pelagic MarineMGRVKDIFQDQRERASKLCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0209602_113605633300025704Pelagic MarineQRERASKVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE
Ga0208767_1011618103300025769AqueousMGKVKDIFQDQRERASVVCPECDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0208545_104630753300025806AqueousMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFSRDIGEPYENPVDCERCQGEGAIFEEQEDEDL
Ga0209555_1033546713300025879MarineIFQDQRERASKICPECDGDGKVVETTYRVQSFSRDIGEPYEDPVDCETCQGEGAIFVEEDDEDL
Ga0209632_10029024103300025886Pelagic MarineMGKVKDIFQDQRERASVVCPECDGDGKVVEITYRRQSFDRDIGEPYEDPVECETCNGEGAIFEGQDDE
Ga0209630_1022750413300025892Pelagic MarineMGRVKDIFQDQRERASKLCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQG
Ga0209630_1026600323300025892Pelagic MarineMGRVKDIFQDQRERASKVCPECDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0209335_1017270853300025894Pelagic MarineMGKVKDIFQDQRERASKVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIF
Ga0209335_1017830833300025894Pelagic MarineMGKVKDIFQDRRERASVVCPECDGDGKVVEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIF
Ga0209425_1007184333300025897Pelagic MarineMGRVKDIFQDQRERASKLCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDEDL
(restricted) Ga0233413_1043754923300027996SeawaterFVWHLLPSVFLCGDFVMGKVKDIFQDQREKASKVCPECDGDGKVIEITYKVQSFSRDIGEPYEDPVDCETCQGEGAVFVEEDDEDL
Ga0228646_115814713300028280SeawaterMGKVKDIFQDQRERASKVCPECDGDGKVVEITYRVQSFSRDIGEPYEDPVDCETCQG
Ga0307380_10001730313300031539SoilMGRVKDIFQDQRERASKICPECDGDGKVVEVTYRRQSFSRDIGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0307380_1008825683300031539SoilMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0307378_10062082103300031566SoilMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0316198_1034754923300032251SedimentMGRVKDIFQDRRERASVVCPECDGDGKVIEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0316202_1000516173300032277Microbial MatMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEGQDDEDL
Ga0316202_1004252533300032277Microbial MatMGRVKDIFQDQRERASVVCPECDGDGKVVDVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDEDL
Ga0316202_1006813053300032277Microbial MatMGKVKDIFQDQRERTSKVCPECDGDGKVIEVTYRRQSFDRDIGEPYEDPVDCETCQGEGAIFEEQDDEDL
Ga0316202_1008069453300032277Microbial MatMGRVKNIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEDDENL
Ga0316202_1044770513300032277Microbial MatMGRVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEEEEDED
Ga0316204_1009627713300032373Microbial MatMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDPVDCERCQGEGAIFEGQDD
Ga0316204_1084236623300032373Microbial MatMGKVKDIFQDQRERASVVCPECDGDGKVVEITYRVQSFDRDIGEPYEDPVNCERCQGEGAIFEEEDDEDL
Ga0348336_063435_81_2933300034375AqueousMGRVKDIFQDQRERASVVCPECDGDGKVIEVTYRRQSFDRDIGEPYEDPVECETCNGEGAIFEEQDDEDL
Ga0348337_017314_1422_16193300034418AqueousMGKVKDIFQDQRERASVVCPECDGDGKVVEVTYRVQSFDRDIGEPYEDRCQGEGAIFEEENDEDL


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