Basic Information | |
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Family ID | F098919 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 61 residues |
Representative Sequence | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK |
Number of Associated Samples | 40 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 12.62 % |
% of genes near scaffold ends (potentially truncated) | 36.89 % |
% of genes from short scaffolds (< 2000 bps) | 67.96 % |
Associated GOLD sequencing projects | 26 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (43.689 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (65.049 % of family members) |
Environment Ontology (ENVO) | Unclassified (80.583 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (80.583 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 65.57% β-sheet: 0.00% Coil/Unstructured: 34.43% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Freshwater Lake Freshwater Deep Subsurface Aqueous Freshwater To Marine Saline Gradient Pelagic Marine Marine Marine Marine Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_100068797 | 3300000101 | Marine | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
M2t6BS1_13626425 | 3300002137 | Marine | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYFK* |
Ga0075466_10024294 | 3300006029 | Aqueous | MSEELESQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0075466_10260873 | 3300006029 | Aqueous | MSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKSCGMCIYKYSVKLFDKYLK* |
Ga0075466_10355742 | 3300006029 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQDDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0075466_10446394 | 3300006029 | Aqueous | EQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLQ* |
Ga0075466_10726792 | 3300006029 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0075466_11598673 | 3300006029 | Aqueous | NIMSKKKRIIVKPPVMSEELENEIRVIVKQESGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK* |
Ga0075467_100230767 | 3300006803 | Aqueous | SEELEQQIRVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYLK |
Ga0075467_100650292 | 3300006803 | Aqueous | MSKKKRIIVKPPVMSQELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFAYRIDKSCGMCIYKYSVKLFDKYLK* |
Ga0075467_100669842 | 3300006803 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKSCGMCIYKYSVKLFDKYLK* |
Ga0075467_100865174 | 3300006803 | Aqueous | MSEELEQQIRVMIRQQGGAISPHLLKEFQRLCQDTFNYRPNISCGECIYKHSVKLYNEFLSE* |
Ga0075467_100961212 | 3300006803 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0075467_100994903 | 3300006803 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDCAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0070748_10197392 | 3300006920 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLKAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0070748_10379155 | 3300006920 | Aqueous | IVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0070748_10408462 | 3300006920 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQESGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK* |
Ga0070748_10636743 | 3300006920 | Aqueous | MSEEIEQQIRVIVKQQGGGISPHLRAEFQRLCQDDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0070748_11882811 | 3300006920 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFAYRIDKSCGMCIYKYS |
Ga0070748_12508731 | 3300006920 | Aqueous | PPVMSEELENEIRVIVKQESGVVSPHLLNEMQLLCQADFNYRIDKSCGICIYKHSVKLFDKYLK* |
Ga0070748_12513522 | 3300006920 | Aqueous | MSEELERQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0070748_12927632 | 3300006920 | Aqueous | MSKKKRILVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKSCGMCIYKYSVK |
Ga0070748_12991192 | 3300006920 | Aqueous | MSKKKRILVKPPVMSQELENEIRVIVKQQSGVVSPHLLNEMQLLCQKDFAYRIDKSCGMCIYKYSVKLFDKYLK* |
Ga0099851_10228151 | 3300007538 | Aqueous | PVMSQELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFAYRIDKSCGMCIYKYSVKLFDKYLK* |
Ga0099851_10449893 | 3300007538 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYFK* |
Ga0099851_11048572 | 3300007538 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLLNEFQRLCQDTFNYRPDIECGECIYKHSVKLFDKYLK* |
Ga0099851_11086792 | 3300007538 | Aqueous | MSKKKRILVKPPVMSEELKNEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK* |
Ga0099851_13360672 | 3300007538 | Aqueous | MSEELEQQIRVIIKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0099847_11419692 | 3300007540 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDVSCGKCIYKHSVKLFDKYLK* |
Ga0099847_11640363 | 3300007540 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQQDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0099847_12100691 | 3300007540 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKL |
Ga0099846_11237021 | 3300007542 | Aqueous | RVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0099846_12218253 | 3300007542 | Aqueous | MSEELESQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFD |
Ga0115550_10242895 | 3300009076 | Pelagic Marine | MSEELEQEIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0115550_11339762 | 3300009076 | Pelagic Marine | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPNITCGKCIYKHSVKLFDKYLNDN* |
Ga0114918_100278498 | 3300009149 | Deep Subsurface | MSEELEQEIRVMVKQGGGRLSPHLKPELQALCQTDFNYRVDISCGKCIYKHSVKLFDKYLK* |
Ga0114918_104273622 | 3300009149 | Deep Subsurface | MSEDLEKNIQVMVKQQGGRLSENLRSEFIVLCQIAFQYRPDMSCGKCIYKYAVKLFDKYIK* |
Ga0114918_105202041 | 3300009149 | Deep Subsurface | KRERKTITNIMSEELEQEIRVMVKQGGGRLSPHLKPELQALCQTDFNYRVDISCGKCIYKHSVKLFDKYLK* |
Ga0105097_100172347 | 3300009169 | Freshwater Sediment | MSEELENEIRVIVKQQSGVVSPHLLKELQLLSQEDFNYRVDISCGKCIYKYSVKLFDKYLK* |
Ga0136655_10200481 | 3300010316 | Freshwater To Marine Saline Gradient | RMSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0136655_11553433 | 3300010316 | Freshwater To Marine Saline Gradient | MSEELEQQIRVIVKQQGGGISPNLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0136655_11773231 | 3300010316 | Freshwater To Marine Saline Gradient | MSEELEQQIRLIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVK |
Ga0136655_12477712 | 3300010316 | Freshwater To Marine Saline Gradient | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYLQ* |
Ga0129324_103952922 | 3300010368 | Freshwater To Marine Saline Gradient | VIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0129324_104203082 | 3300010368 | Freshwater To Marine Saline Gradient | EMSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQQDFAYRPDITCGKCIYKHSVKLFDKYLK* |
Ga0150979_10063602 | 3300011012 | Marine | MTNELENEIRVIVKQQGGRLSEHLKPEFIKLCQESFQYRPDMDCGKCIYKHSVKLHTQFLK* |
Ga0164293_100273788 | 3300013004 | Freshwater | MSEELEKEIRVIVKQQSGVVSPHLLKELQLLSQEDFNYRVDISCGKCIYKYSVKLFDKYLK* |
Ga0164293_101326633 | 3300013004 | Freshwater | MSEELEKEIRVIVKQQSGVVSPHLLKELQLLSQQDFNYRVDISCGKCIYKYSVKLFDKYLK* |
Ga0164292_100585632 | 3300013005 | Freshwater | MSEELEKEIRVIVKQQSGVVSPHLLKELQRLSQQDFNYRVDISCGKCIYKYSVKLFDKYLK* |
Ga0129327_106609811 | 3300013010 | Freshwater To Marine Saline Gradient | QIRVMIRQQGGAISPHLLKEFQRLCQDTFNYRPNISCGECIYKHSVKLYNEFLSE* |
Ga0188851_10042582 | 3300018682 | Freshwater Lake | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0188851_10153191 | 3300018682 | Freshwater Lake | GQQIRVMIRQQGGAISPHLLKEFQRLCQDTFNYRPNISCGECIYKHSVKLYNEFLSE |
Ga0212030_10208941 | 3300022053 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIY |
Ga0212030_10623461 | 3300022053 | Aqueous | KEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK |
Ga0212030_10685193 | 3300022053 | Aqueous | MSEELEQQIRVIVKQQGGGISPNLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0212023_10005074 | 3300022061 | Aqueous | MSEELESQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0212023_10022161 | 3300022061 | Aqueous | SEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK |
Ga0212023_10050652 | 3300022061 | Aqueous | QIRVIVKQKGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK |
Ga0196889_10036732 | 3300022072 | Aqueous | MSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKSCGMCIYKYSVKLFDKYL |
Ga0196889_10041196 | 3300022072 | Aqueous | MSEELENEIRVIVKQESGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYL |
Ga0196889_10055333 | 3300022072 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLKAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0196889_10062267 | 3300022072 | Aqueous | MSQELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFAYRIDKSCGMCIYKYSVKLFDKYL |
Ga0196889_10136772 | 3300022072 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQDDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0196889_10632201 | 3300022072 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKF |
Ga0196889_10783391 | 3300022072 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLF |
Ga0196889_10792222 | 3300022072 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKSCGMCIYKYSVKLFDKYLK |
Ga0196903_10011673 | 3300022169 | Aqueous | MSEELEQQIRVIIKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0196903_10456422 | 3300022169 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQQDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0196901_10136616 | 3300022200 | Aqueous | MSKKKRIIVKPPVMSQELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFAYRIDKSCGMCIYKYSVKLFDKYLK |
Ga0196901_10393373 | 3300022200 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK |
Ga0196901_10567631 | 3300022200 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCI |
Ga0196901_10857452 | 3300022200 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQESGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK |
Ga0210003_10191861 | 3300024262 | Deep Subsurface | ANIMSEELEQEIRVMVKQGGGRLSPHLKPELQALCQTDFNYRVDISCGKCIYKHSVKLFDKYLK |
Ga0210003_10657453 | 3300024262 | Deep Subsurface | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDK |
Ga0208148_10012159 | 3300025508 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0208148_10915572 | 3300025508 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0208303_10266802 | 3300025543 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYF |
Ga0208303_10541252 | 3300025543 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDVSCGKCIYKHSVKLFDKYL |
Ga0208303_10982113 | 3300025543 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKY |
Ga0208660_100079830 | 3300025570 | Aqueous | MSEELESQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKL |
Ga0208660_11009082 | 3300025570 | Aqueous | VIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYLQ |
Ga0209195_10222273 | 3300025590 | Pelagic Marine | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPNITCGKCIYKHSVKLFDKYLNDN |
Ga0209504_10218783 | 3300025621 | Pelagic Marine | MSEELEQEIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0208643_10165234 | 3300025645 | Aqueous | MSKKKRILVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK |
Ga0208643_10415451 | 3300025645 | Aqueous | ELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK |
Ga0208643_10732323 | 3300025645 | Aqueous | KRMSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLQ |
Ga0208643_10999801 | 3300025645 | Aqueous | MSEELERQIRVIVKQQGGGISPHLRAEFQKLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0208160_10291591 | 3300025647 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQKLCQDDFAYRPDITCGKCIYKHSVKLFDKYF |
Ga0208160_10552663 | 3300025647 | Aqueous | MSEELEQQIRVIVKQQGGGISPHLRAEFQRLCQDDFAYRPDITCGKCIYKHSVKLF |
Ga0208795_10075795 | 3300025655 | Aqueous | MSKKKRIIVKPPVMSEELENEIRVIVKQQSGVVSPHLLNEMQVLCQNDFAYRIDKSCGMCIYKYSVKLFDKYLK |
Ga0208795_10563404 | 3300025655 | Aqueous | PVMSEELKNEIRVIVKQQSGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK |
Ga0209308_101092021 | 3300025869 | Pelagic Marine | RVIVKQQGGGISPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYLK |
Ga0208544_103006251 | 3300025887 | Aqueous | SEELENEIRVIVKQESGVVSPHLLNEMQVLCQNDFNYRIDKTCGMCIYKYSVKLFDKYLK |
Ga0209492_10132901 | 3300027721 | Freshwater Sediment | MSEELENEIRVIVKQQSGVVSPHLLKELQLLSQEDFNYRVDISCGKCIYKYSVKLFDKYL |
Ga0307380_104926602 | 3300031539 | Soil | MSEELEQEIRVMVKQGGGRLSPHLRAEFQRLCQEDFAYRPDITCGKCIYKHSVKLFDKYL |
Ga0307380_110791532 | 3300031539 | Soil | MSEELEQEIRVMVKQGGGRLSQHLKPELQRLCQTDFNYRVDISCGKCIYKHSVKLFDKYL |
Ga0307379_103257013 | 3300031565 | Soil | MSEELEQEIRVMVKQGGGRLSPHLKPELQALCQTDFNYRVDISCGKCIYKHSVKLFDKYL |
Ga0307379_106128832 | 3300031565 | Soil | MSEDLEKNIQVMVKQQGGRLSENLRSEFIVLCQTAFQYRPDMSCGKCIYKYAVKLFDKYI |
Ga0307378_106583651 | 3300031566 | Soil | MSEELEQEIRVMVKQGGGRLSPHLKPELQRLCQTDFNYRVDISCGKCIYKHSVKLFDKYL |
Ga0307377_111541662 | 3300031673 | Soil | MSEELEQQIRVMIRQQGGAISPHLLKEFQRLCQDTFNYRPNISCGECIYKHSVKLYNEFLSE |
Ga0334979_0004826_1412_1597 | 3300033996 | Freshwater | MSEELEKEIRVIVKQQSGVVSPHLLKELQLLSQEDFNYRVDISCGKCIYKYSVKLFDKYL |
Ga0334979_0064813_2060_2245 | 3300033996 | Freshwater | MSEELEKEIRVIVKQQSGVVSPHLLKELQLLSQQDFNYRVDISCGKCIYKYSVKLFDKYL |
Ga0334979_0067497_314_499 | 3300033996 | Freshwater | MSEELEKEIRVIVKQQSGVVSPHLLKELQRLSQEDFNYRVDISCGKCIYKYSIKLFDKYL |
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