Basic Information | |
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Family ID | F098907 |
Family Type | Metagenome |
Number of Sequences | 103 |
Average Sequence Length | 46 residues |
Representative Sequence | MHRYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF |
Number of Associated Samples | 50 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 84.47 % |
% of genes near scaffold ends (potentially truncated) | 18.45 % |
% of genes from short scaffolds (< 2000 bps) | 66.02 % |
Associated GOLD sequencing projects | 37 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.52 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (40.777 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (67.961 % of family members) |
Environment Ontology (ENVO) | Unclassified (77.670 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (90.291 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 51.35% β-sheet: 0.00% Coil/Unstructured: 48.65% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.52 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Freshwater Lake Freshwater Lake Sediment Freshwater Lake Freshwater Sediment Freshwater Aqueous Marine Estuary Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
TBL_comb48_EPIDRAFT_100368712 | 3300000439 | Freshwater | MHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALAYFDILTF* |
Water_1020154 | 3300002930 | Estuary Water | MKYTYSPSREAIEKRRAAVMDLLTVLAIAGALTVLALAYFDILTF* |
Ga0031655_102657262 | 3300003852 | Freshwater Lake Sediment | LTYKENIMHKYTYSPSREQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF* |
Ga0065861_11932372 | 3300004448 | Marine | MPDYTYSPSQEAFEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF* |
Ga0007809_100256335 | 3300004807 | Freshwater | MHRYTYSPSQEQVERRRAAMMDFLAVLIYSAALTLLALDYFDILTF* |
Ga0007809_100369424 | 3300004807 | Freshwater | MHRYTYSPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF* |
Ga0007833_11023802 | 3300006106 | Freshwater | MHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALDYFDILTF* |
Ga0007862_10370972 | 3300006108 | Freshwater | MHRYTYSPSQEQIERRRAAMMDFFAVLVYSAALTLLALDYFNILTF* |
Ga0075464_100132011 | 3300006805 | Aqueous | MHRYTYKPTQEALEKRRQAAMDFFAVLIYAAGLTLCALAYFDILTF* |
Ga0114973_1000233410 | 3300009068 | Freshwater Lake | MKYTYSPSREAIEKRRAAAMDLLTVLAIAGALTVLALAYFDILTF* |
Ga0114973_100248125 | 3300009068 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAGLTLLGLAYFDILTF* |
Ga0114973_106209491 | 3300009068 | Freshwater Lake | MHHHYTYSPSQEALEKRRAVAMDMLAVLAIAAGLTLLGLAYFDILTF* |
Ga0114962_100263858 | 3300009151 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDLLAVLAYSIGLTLLLLAWFDVLTF* |
Ga0114962_100270484 | 3300009151 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLAYFDILTF* |
Ga0114962_100290602 | 3300009151 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDLLAVLAYSISLTLLLLAWFDVLTF* |
Ga0114962_100354594 | 3300009151 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLAVLVIAAGLTLLGLAYFDILTF* |
Ga0114962_101069302 | 3300009151 | Freshwater Lake | MHRYTYKPSQEALEKRRAAAMDFFAVLVYAAALTALALAYFDILTF* |
Ga0114962_101205982 | 3300009151 | Freshwater Lake | MHRYTYKPTQEALEKRRAAAMDILAVLAYAAALTVCALAYFDILTF* |
Ga0114962_101304175 | 3300009151 | Freshwater Lake | MKYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF* |
Ga0114962_101817173 | 3300009151 | Freshwater Lake | MKYTYSPSQEKMEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF* |
Ga0114962_107134871 | 3300009151 | Freshwater Lake | LEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF* |
Ga0114963_100597694 | 3300009154 | Freshwater Lake | MQVLIMHRYTYSPSQEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF* |
Ga0114963_103240141 | 3300009154 | Freshwater Lake | MHRYTYKPTQEALEKRRQAAMDMLAVLVYAAALTALALAYFDILTF* |
Ga0114968_100993423 | 3300009155 | Freshwater Lake | MHRYTYKPTQEALEKRRAAAMDMLAVLAYSVALTVCALAYFDILTF* |
Ga0114968_101395515 | 3300009155 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF* |
Ga0114968_104112972 | 3300009155 | Freshwater Lake | MKYTYSPSREAIEKRRAAAVDFLTVLAIAGALTVLALAYFDILL* |
Ga0114968_104287143 | 3300009155 | Freshwater Lake | MHHHYTYKPTQEALEKRRAAAMDMLAVLAIAAAITLLGLAYFDILTF* |
Ga0114977_103164632 | 3300009158 | Freshwater Lake | MRHHYTYSPSQEALEKRRAAAMDLLAVLAIAGALTVLALAYFDILF* |
Ga0114978_100928201 | 3300009159 | Freshwater Lake | MKYTYSPSQEKIEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF* |
Ga0114966_100272477 | 3300009161 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF* |
Ga0114975_105796802 | 3300009164 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLTVLAIAAGLTLLGLAYFDILTF* |
Ga0114969_101461753 | 3300009181 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDILAVLAIAAGLTLLGL |
Ga0114969_107827281 | 3300009181 | Freshwater Lake | REAIEKRRAAAMDFLTVLAISGALTVLALAYFDILTF* |
Ga0114959_101011943 | 3300009182 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDILAVLAYSVALTVLALAYFDILTF* |
Ga0114959_102801991 | 3300009182 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGL |
Ga0114959_103699762 | 3300009182 | Freshwater Lake | MHRYTYKPTQEALEKRRAAAMDMLAVLAIAAALTVLALAYFDILTF* |
Ga0114958_102589332 | 3300009684 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF* |
Ga0114964_104882931 | 3300010157 | Freshwater Lake | LLQGVNIMHRYTYSPSQEALEKRRAAAMDLLAVLAYSISLTLLLLAWFDVLTF* |
Ga0114964_106176411 | 3300010157 | Freshwater Lake | LTGEPTMHRYTYKPTQEALEKRRAAAMDVLAILAYAAGLTVCALAYFDILTF* |
Ga0114960_100112561 | 3300010158 | Freshwater Lake | EALEKRRAAAMDILAVLAYSVALTVLALAYFDILTF* |
Ga0114960_101548623 | 3300010158 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF* |
Ga0114960_103704311 | 3300010158 | Freshwater Lake | YKPTQEALEKRRAAAMDMLAVLAIAAALTVLALAYFDILTF* |
Ga0114967_101763135 | 3300010160 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAAFTLLGLAYFDILTF* |
Ga0114967_101906493 | 3300010160 | Freshwater Lake | MKYTYSPSREAIEKRRAAAMDFLTVLAISGALTVLALAYFDILTF* |
Ga0114967_102670993 | 3300010160 | Freshwater Lake | HHYTYKPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF* |
Ga0136235_10040264 | 3300010233 | Freshwater | MKYTYSPSQEALEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF* |
Ga0133913_102366436 | 3300010885 | Freshwater Lake | MKYTYSPSREAIEKRRAAAMDFLAVLVIAAGLTLLGLAYFDILTF* |
Ga0133913_103813932 | 3300010885 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLAYFDILTF* |
Ga0133913_105575205 | 3300010885 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDILAVLAYSISLTLLLLAWFDVLTF* |
Ga0133913_106439674 | 3300010885 | Freshwater Lake | MHHHYTYSPSREAIEKRRAAAMDLLTILAIAAGLTLLGLAYFDILTF* |
Ga0133913_111973342 | 3300010885 | Freshwater Lake | MHRYTYKPTQEALEKRRQAAMDFFAVLVYAAALTALALAYFDILTF* |
Ga0133913_113282611 | 3300010885 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDILAVLAIAAGLTLLGLA |
Ga0133913_113360361 | 3300010885 | Freshwater Lake | KEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF* |
Ga0133913_114474893 | 3300010885 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF* |
Ga0133913_130656902 | 3300010885 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDMLAVLFIAAGLTLLGLAYFDILTF* |
Ga0133913_133138085 | 3300010885 | Freshwater Lake | MHRYTYKPTQEALEKRRAAAMDMLAVLVYAAALTALALAYFDILTF* |
Ga0133913_135116314 | 3300010885 | Freshwater Lake | MHRYTYSPSQEAIEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF* |
Ga0136642_10048604 | 3300013285 | Freshwater | MRHHYTYSPSQEALEKRRAAAMDMLAVLAYSVALTLLLLAWFDIITF* |
Ga0136642_10075088 | 3300013285 | Freshwater | QEALEKRRAAAMDILAVLAYSVALTLLLLAYFDILTF* |
Ga0136642_10114206 | 3300013285 | Freshwater | MRHHYTYSPSQEALEKRRAAAMDMLAVLACSIGLTLLLLAYFDILTF* |
Ga0136642_10325024 | 3300013285 | Freshwater | MRHHYTYSPSQEALEKRRAAAMDILAVLAYSVALTLLLLAYFDILTF* |
Ga0136642_10517925 | 3300013285 | Freshwater | RHHYTYSPSQEALEKRRAAAMDILAVLACSIGLTLLLLAYFDILTF* |
Ga0136641_10958772 | 3300013286 | Freshwater | MKYTYSPSQEKMEKRRAAAMDFLAVLAYSAGLTLLGLAYFDILTF* |
Ga0181338_10049035 | 3300015050 | Freshwater Lake | MHRYTYKPTQEALERRRAAAMDFFAVLVYAAGLTLCALAYFDILTF* |
Ga0214194_1100511 | 3300020686 | Freshwater | MHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALAYFDILTF |
Ga0214207_10108292 | 3300020716 | Freshwater | MHRYTYSPSQEQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF |
Ga0208256_10078672 | 3300025382 | Freshwater | MHRYTYSPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF |
Ga0208256_10106322 | 3300025382 | Freshwater | MHRYTYSPSQEQVERRRAAMMDFLAVLIYSAALTVCALAYFDILTF |
Ga0207959_10005772 | 3300025387 | Freshwater | MHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALDYFDILTF |
Ga0207959_10104365 | 3300025387 | Freshwater | HRYTYSPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF |
Ga0208248_10379794 | 3300025595 | Freshwater | MKYTYSPSREAIEKRRAAAMDFLTVLAIAGALTVLALAYFDILTF |
Ga0208916_101813151 | 3300025896 | Aqueous | MHRYTYKPTQEALEKRRQAAMDFFAVLIYAAGLTLCALAYFDILTF |
Ga0209188_10046124 | 3300027708 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDLLAVLAYSIGLTLLLLAWFDVLTF |
Ga0209188_101077810 | 3300027708 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLA |
Ga0209188_10213405 | 3300027708 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDILAVLAYSVALTVLALAYFDILTF |
Ga0209188_10706375 | 3300027708 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF |
Ga0209499_100029332 | 3300027712 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLAYFDILTF |
Ga0209499_10501974 | 3300027712 | Freshwater Lake | MKYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF |
Ga0209499_11479913 | 3300027712 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF |
Ga0209297_12689002 | 3300027733 | Freshwater Lake | MRHHYTYSPSQEALEKRRAAAMDLLAVLAIAGALTVLALAYFDILF |
Ga0209085_100020532 | 3300027741 | Freshwater Lake | MKYTYSPSREAIEKRRAAAMDLLTVLAIAGALTVLALAYFDILTF |
Ga0209085_10039578 | 3300027741 | Freshwater Lake | MHRYTYKPTQEALEKRRAAAMDILAVLAYAAALTVCALAYFDILTF |
Ga0209085_10535172 | 3300027741 | Freshwater Lake | MHRYTYKPSQEALEKRRAAAMDFFAVLVYAAALTALALAYFDILTF |
Ga0209085_10590254 | 3300027741 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF |
Ga0209597_100027243 | 3300027746 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAGLTLLGLAYFDILTF |
Ga0209084_10061449 | 3300027749 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDLLAVLAYSISLTLLLLAWFDVLTF |
Ga0209084_11975653 | 3300027749 | Freshwater Lake | MKYTYSPSQEKMEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF |
Ga0209596_11063314 | 3300027754 | Freshwater Lake | MHHHYTYKPSQEALEKRRAAAMDILAVLAIAAGLTLLGLAYFDILTF |
Ga0209088_102760063 | 3300027763 | Freshwater Lake | MRYTYSPSREAIEKRRAAAMDFLTVVAIAGALTVLALAYFDILTF |
Ga0209134_103452961 | 3300027764 | Freshwater Lake | MHRYTYKPTQEALERRRAAAMDFFAVLVYAAGLTLCALAYFDILTF |
Ga0209086_101543192 | 3300027770 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF |
Ga0209829_1000300114 | 3300027777 | Freshwater Lake | MHRYTYSPSQEALEKRRAAAMDILAVLAYSISLTLLLLAWFDVLTF |
Ga0209829_102741423 | 3300027777 | Freshwater Lake | MKYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLGLAYFDILTF |
Ga0209829_103288342 | 3300027777 | Freshwater Lake | MHRYTYKPTQEALEKRRQAAMDFFAVLVYAAALTALALAYFDILTF |
Ga0209246_100263474 | 3300027785 | Freshwater Lake | MHRYTYKPTQESLEKRRQAAMDFFAVLVYAAGLTLCALAYFDILTF |
Ga0209354_100080518 | 3300027808 | Freshwater Lake | MHRYTYKPTQEALEKRRQAAMDFFAVLVYAAGLTLCALAYF |
Ga0209777_101607723 | 3300027896 | Freshwater Lake Sediment | MHRYTYKPSQEALEKRRAAAMDMIAVLIYSAALTLLALDYFDILTF |
Ga0209777_101972971 | 3300027896 | Freshwater Lake Sediment | PSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF |
Ga0209777_102575711 | 3300027896 | Freshwater Lake Sediment | SLNILAYKENIMHKYTYSPSQEQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF |
Ga0209777_109918012 | 3300027896 | Freshwater Lake Sediment | MHKYTYSPSREQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF |
Ga0209400_10757506 | 3300027963 | Freshwater Lake | MHRYTYKPTQEALEKRRAAAMDMLAVLAYSVALTVCALAYFDILTF |
Ga0209191_13658812 | 3300027969 | Freshwater Lake | MHHHYTYSPSQEALEKRRAAAMDLLTVLAIAAGLTLLGLAYFDILTF |
Ga0315274_117822602 | 3300031999 | Sediment | MHHHYTYKPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF |
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