Basic Information | |
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Family ID | F098896 |
Family Type | Metagenome |
Number of Sequences | 103 |
Average Sequence Length | 62 residues |
Representative Sequence | FKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAQDIVEASKKAMELETK |
Number of Associated Samples | 61 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 92.23 % |
Associated GOLD sequencing projects | 58 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.42 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (62.136 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (38.835 % of family members) |
Environment Ontology (ENVO) | Unclassified (65.049 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (66.019 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 34.09% β-sheet: 0.00% Coil/Unstructured: 65.91% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF13481 | AAA_25 | 4.85 |
PF09250 | Prim-Pol | 4.85 |
PF01844 | HNH | 3.88 |
PF01541 | GIY-YIG | 2.91 |
PF01242 | PTPS | 2.91 |
PF15731 | MqsA_antitoxin | 1.94 |
PF05014 | Nuc_deoxyrib_tr | 0.97 |
PF10544 | T5orf172 | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG0720 | 6-pyruvoyl-tetrahydropterin synthase | Coenzyme transport and metabolism [H] | 2.91 |
COG3613 | Nucleoside 2-deoxyribosyltransferase | Nucleotide transport and metabolism [F] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 62.14 % |
All Organisms | root | All Organisms | 37.86 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300003497|JGI25925J51416_10029705 | All Organisms → Viruses → Predicted Viral | 1566 | Open in IMG/M |
3300005584|Ga0049082_10334566 | Not Available | 502 | Open in IMG/M |
3300005805|Ga0079957_1128504 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1326 | Open in IMG/M |
3300006805|Ga0075464_10519913 | Not Available | 729 | Open in IMG/M |
3300008267|Ga0114364_1140956 | Not Available | 682 | Open in IMG/M |
3300009068|Ga0114973_10091351 | All Organisms → Viruses → Predicted Viral | 1738 | Open in IMG/M |
3300009068|Ga0114973_10102689 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1623 | Open in IMG/M |
3300009152|Ga0114980_10024275 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 3770 | Open in IMG/M |
3300009160|Ga0114981_10140029 | All Organisms → cellular organisms → Bacteria | 1337 | Open in IMG/M |
3300009161|Ga0114966_10191835 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium | 1300 | Open in IMG/M |
3300009164|Ga0114975_10498518 | Not Available | 656 | Open in IMG/M |
3300009180|Ga0114979_10250823 | Not Available | 1060 | Open in IMG/M |
3300009529|Ga0114919_10980957 | Not Available | 569 | Open in IMG/M |
3300010354|Ga0129333_10869860 | Not Available | 764 | Open in IMG/M |
3300010370|Ga0129336_10218886 | Not Available | 1078 | Open in IMG/M |
3300010370|Ga0129336_10252861 | Not Available | 990 | Open in IMG/M |
3300010370|Ga0129336_10280340 | Not Available | 930 | Open in IMG/M |
3300010370|Ga0129336_10409878 | Not Available | 739 | Open in IMG/M |
3300010370|Ga0129336_10578832 | Not Available | 600 | Open in IMG/M |
3300010370|Ga0129336_10726001 | Not Available | 525 | Open in IMG/M |
3300010885|Ga0133913_10593975 | All Organisms → Viruses → Predicted Viral | 2907 | Open in IMG/M |
3300013006|Ga0164294_10090118 | All Organisms → Viruses → Predicted Viral | 2290 | Open in IMG/M |
(restricted) 3300013132|Ga0172372_10541437 | Not Available | 762 | Open in IMG/M |
3300014050|Ga0119952_1037396 | All Organisms → cellular organisms → Bacteria | 1418 | Open in IMG/M |
3300014050|Ga0119952_1074366 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium | 846 | Open in IMG/M |
3300017701|Ga0181364_1040696 | Not Available | 741 | Open in IMG/M |
3300017701|Ga0181364_1078539 | Not Available | 502 | Open in IMG/M |
3300017707|Ga0181363_1005010 | All Organisms → cellular organisms → Bacteria | 2891 | Open in IMG/M |
3300017722|Ga0181347_1085234 | Not Available | 916 | Open in IMG/M |
3300017722|Ga0181347_1089922 | Not Available | 886 | Open in IMG/M |
3300017747|Ga0181352_1051290 | Not Available | 1200 | Open in IMG/M |
3300017761|Ga0181356_1031687 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium | 1892 | Open in IMG/M |
3300017761|Ga0181356_1113537 | Not Available | 871 | Open in IMG/M |
3300017761|Ga0181356_1165770 | Not Available | 675 | Open in IMG/M |
3300017774|Ga0181358_1152915 | Not Available | 786 | Open in IMG/M |
3300017780|Ga0181346_1044772 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium | 1804 | Open in IMG/M |
3300017780|Ga0181346_1070544 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1389 | Open in IMG/M |
3300017780|Ga0181346_1082324 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1267 | Open in IMG/M |
3300017780|Ga0181346_1146025 | Not Available | 889 | Open in IMG/M |
3300017780|Ga0181346_1158640 | Not Available | 841 | Open in IMG/M |
3300017780|Ga0181346_1328222 | Not Available | 512 | Open in IMG/M |
3300017784|Ga0181348_1135501 | Not Available | 934 | Open in IMG/M |
3300017784|Ga0181348_1159801 | Not Available | 837 | Open in IMG/M |
3300017784|Ga0181348_1230516 | Not Available | 649 | Open in IMG/M |
3300017784|Ga0181348_1265640 | Not Available | 588 | Open in IMG/M |
3300019784|Ga0181359_1056649 | All Organisms → cellular organisms → Bacteria | 1505 | Open in IMG/M |
3300019784|Ga0181359_1062060 | Not Available | 1430 | Open in IMG/M |
3300019784|Ga0181359_1086428 | All Organisms → Viruses → Predicted Viral | 1168 | Open in IMG/M |
3300019784|Ga0181359_1099696 | All Organisms → Viruses → Predicted Viral | 1066 | Open in IMG/M |
3300019784|Ga0181359_1172398 | All Organisms → cellular organisms → Bacteria | 722 | Open in IMG/M |
3300019784|Ga0181359_1213471 | Not Available | 612 | Open in IMG/M |
3300019784|Ga0181359_1263562 | Not Available | 515 | Open in IMG/M |
3300021961|Ga0222714_10131666 | All Organisms → Viruses → Predicted Viral | 1528 | Open in IMG/M |
3300021962|Ga0222713_10746146 | Not Available | 553 | Open in IMG/M |
3300021963|Ga0222712_10062746 | All Organisms → cellular organisms → Bacteria | 2717 | Open in IMG/M |
3300022190|Ga0181354_1079522 | All Organisms → Viruses → Predicted Viral | 1082 | Open in IMG/M |
3300022190|Ga0181354_1156075 | Not Available | 710 | Open in IMG/M |
3300022190|Ga0181354_1157339 | Not Available | 706 | Open in IMG/M |
3300022190|Ga0181354_1178031 | Not Available | 648 | Open in IMG/M |
3300022190|Ga0181354_1214419 | Not Available | 566 | Open in IMG/M |
3300022752|Ga0214917_10021461 | All Organisms → cellular organisms → Bacteria → PVC group | 5264 | Open in IMG/M |
3300023174|Ga0214921_10242511 | All Organisms → Viruses → Predicted Viral | 1067 | Open in IMG/M |
3300023174|Ga0214921_10442392 | Not Available | 644 | Open in IMG/M |
3300023179|Ga0214923_10012278 | Not Available | 8463 | Open in IMG/M |
3300023179|Ga0214923_10174654 | Not Available | 1303 | Open in IMG/M |
3300023179|Ga0214923_10198650 | All Organisms → Viruses → Predicted Viral | 1185 | Open in IMG/M |
3300027547|Ga0209864_1034319 | Not Available | 632 | Open in IMG/M |
3300027746|Ga0209597_1060724 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium | 1830 | Open in IMG/M |
3300027754|Ga0209596_1156780 | All Organisms → Viruses → Predicted Viral | 1008 | Open in IMG/M |
3300027756|Ga0209444_10195559 | Not Available | 737 | Open in IMG/M |
3300027756|Ga0209444_10206104 | Not Available | 710 | Open in IMG/M |
3300027759|Ga0209296_1218601 | Not Available | 803 | Open in IMG/M |
3300027770|Ga0209086_10134978 | All Organisms → Viruses → Predicted Viral | 1214 | Open in IMG/M |
3300027770|Ga0209086_10373387 | Not Available | 582 | Open in IMG/M |
3300027785|Ga0209246_10112379 | Not Available | 1069 | Open in IMG/M |
3300027785|Ga0209246_10129669 | Not Available | 991 | Open in IMG/M |
3300027798|Ga0209353_10371136 | Not Available | 593 | Open in IMG/M |
3300027808|Ga0209354_10092062 | Not Available | 1236 | Open in IMG/M |
3300027808|Ga0209354_10111529 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1116 | Open in IMG/M |
3300027969|Ga0209191_1322741 | Not Available | 565 | Open in IMG/M |
(restricted) 3300028557|Ga0247832_1082925 | Not Available | 1442 | Open in IMG/M |
3300029933|Ga0119945_1013817 | Not Available | 1016 | Open in IMG/M |
3300031566|Ga0307378_11199888 | Not Available | 601 | Open in IMG/M |
3300031673|Ga0307377_10355551 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1097 | Open in IMG/M |
3300031746|Ga0315293_10908699 | Not Available | 635 | Open in IMG/M |
3300031772|Ga0315288_11503774 | Not Available | 556 | Open in IMG/M |
3300031834|Ga0315290_11023944 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 694 | Open in IMG/M |
3300031951|Ga0315904_10456012 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1141 | Open in IMG/M |
3300031952|Ga0315294_10197935 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium | 2000 | Open in IMG/M |
3300031952|Ga0315294_11067000 | Not Available | 667 | Open in IMG/M |
3300032046|Ga0315289_10434636 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1289 | Open in IMG/M |
3300032046|Ga0315289_10470808 | All Organisms → Viruses → Predicted Viral | 1220 | Open in IMG/M |
3300032046|Ga0315289_10479135 | Not Available | 1204 | Open in IMG/M |
3300032046|Ga0315289_11178009 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Samistivirus egole | 620 | Open in IMG/M |
3300032050|Ga0315906_10308678 | Not Available | 1421 | Open in IMG/M |
3300032053|Ga0315284_11068477 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 901 | Open in IMG/M |
3300032053|Ga0315284_11291162 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Samistivirus egole | 793 | Open in IMG/M |
3300032053|Ga0315284_11312050 | Not Available | 784 | Open in IMG/M |
3300032092|Ga0315905_10793349 | Not Available | 825 | Open in IMG/M |
3300032156|Ga0315295_11248335 | Not Available | 726 | Open in IMG/M |
3300032164|Ga0315283_12426326 | Not Available | 510 | Open in IMG/M |
3300032177|Ga0315276_11711205 | Not Available | 649 | Open in IMG/M |
3300034356|Ga0335048_0427265 | Not Available | 651 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 38.83% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 14.56% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 13.59% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 9.71% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 6.80% |
Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 2.91% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 2.91% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 1.94% |
Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 1.94% |
Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 0.97% |
Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 0.97% |
Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake | 0.97% |
Aquatic | Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic | 0.97% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 0.97% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 0.97% |
Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Sand | 0.97% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300003497 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN | Environmental | Open in IMG/M |
3300005584 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF | Environmental | Open in IMG/M |
3300005805 | Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA | Environmental | Open in IMG/M |
3300006805 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA | Environmental | Open in IMG/M |
3300008267 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR | Environmental | Open in IMG/M |
3300009068 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG | Environmental | Open in IMG/M |
3300009152 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG | Environmental | Open in IMG/M |
3300009160 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG | Environmental | Open in IMG/M |
3300009161 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG | Environmental | Open in IMG/M |
3300009164 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG | Environmental | Open in IMG/M |
3300009180 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG | Environmental | Open in IMG/M |
3300009529 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG | Environmental | Open in IMG/M |
3300010354 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA | Environmental | Open in IMG/M |
3300010370 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA | Environmental | Open in IMG/M |
3300010885 | northern Canada Lakes Co-assembly | Environmental | Open in IMG/M |
3300013006 | Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG | Environmental | Open in IMG/M |
3300013132 (restricted) | Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m | Environmental | Open in IMG/M |
3300014050 | Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B | Environmental | Open in IMG/M |
3300017701 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N | Environmental | Open in IMG/M |
3300017707 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N | Environmental | Open in IMG/M |
3300017722 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N | Environmental | Open in IMG/M |
3300017747 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N | Environmental | Open in IMG/M |
3300017761 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N | Environmental | Open in IMG/M |
3300017774 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D | Environmental | Open in IMG/M |
3300017780 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N | Environmental | Open in IMG/M |
3300017784 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N | Environmental | Open in IMG/M |
3300019784 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D | Environmental | Open in IMG/M |
3300021961 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D | Environmental | Open in IMG/M |
3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
3300021963 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D | Environmental | Open in IMG/M |
3300022190 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N | Environmental | Open in IMG/M |
3300022752 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB | Environmental | Open in IMG/M |
3300023174 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505 | Environmental | Open in IMG/M |
3300023179 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510 | Environmental | Open in IMG/M |
3300027547 | Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes) | Environmental | Open in IMG/M |
3300027746 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027754 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027756 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes) | Environmental | Open in IMG/M |
3300027759 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027770 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027785 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes) | Environmental | Open in IMG/M |
3300027798 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes) | Environmental | Open in IMG/M |
3300027808 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes) | Environmental | Open in IMG/M |
3300027969 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300028557 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m | Environmental | Open in IMG/M |
3300029933 | Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2 | Environmental | Open in IMG/M |
3300031566 | Soil microbial communities from Risofladan, Vaasa, Finland - UN-1 | Environmental | Open in IMG/M |
3300031673 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-3 | Environmental | Open in IMG/M |
3300031746 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20 | Environmental | Open in IMG/M |
3300031772 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20 | Environmental | Open in IMG/M |
3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
3300031951 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120 | Environmental | Open in IMG/M |
3300031952 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40 | Environmental | Open in IMG/M |
3300032046 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40 | Environmental | Open in IMG/M |
3300032050 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122 | Environmental | Open in IMG/M |
3300032053 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16 | Environmental | Open in IMG/M |
3300032092 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121 | Environmental | Open in IMG/M |
3300032156 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0 | Environmental | Open in IMG/M |
3300032164 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0 | Environmental | Open in IMG/M |
3300032177 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0 | Environmental | Open in IMG/M |
3300034356 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25925J51416_100297051 | 3300003497 | Freshwater Lake | PKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMEEVKESK* |
Ga0049082_103345661 | 3300005584 | Freshwater Lentic | FKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEVKESK* |
Ga0079957_11285041 | 3300005805 | Lake | PHAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELES* |
Ga0075464_105199131 | 3300006805 | Aqueous | APCRPHAGLPQAKCKDASNKTPKTQMWCNALRNITAQDIVEASMKALELEDKQHEEKK* |
Ga0114364_11409562 | 3300008267 | Freshwater, Plankton | VFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMELGDGK* |
Ga0114973_100913514 | 3300009068 | Freshwater Lake | NVSVFEAAVCPHAPCRPHAGLPQAKCKDATNKTPKTQMWCNALRNIKAEDIVLASKKAIDLDFQQGETK* |
Ga0114973_101026894 | 3300009068 | Freshwater Lake | APCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASHKAMELEEK* |
Ga0114980_100242756 | 3300009152 | Freshwater Lake | PKNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRNITAQDIVEASMKALELEDKSQETK* |
Ga0114981_101400293 | 3300009160 | Freshwater Lake | PEVCPHAPCRPHAGLPQAKCKDAINKTAKTQMWCNALRNITAEDIVVASKKAIELESK* |
Ga0114966_101918354 | 3300009161 | Freshwater Lake | PCRPHAGLPQAKCKDASNKTPKTQMWCNALRNIKAEDIVEASMKALELEDKQHEEKK* |
Ga0114975_104985181 | 3300009164 | Freshwater Lake | YYPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNRTPKTQYWCNALRNITAQDIVLASKKAMELESK* |
Ga0114979_102508233 | 3300009180 | Freshwater Lake | FKPDTCPHAPCRPHAGLPQAKCKDASNRTPKTQYWCNALRNITAEDIVLASKKAMELESK |
Ga0114919_109809572 | 3300009529 | Deep Subsurface | LYYPKSVPVFKPDTCPHAPCRPQAGLPQAKCKDATNRTKKTQMWCNALRNITPEDIVEAAKKVVEL* |
Ga0129333_108698601 | 3300010354 | Freshwater To Marine Saline Gradient | KPDTCPHAPCRPHAGLPQQKCKDASNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG* |
Ga0129336_102188863 | 3300010370 | Freshwater To Marine Saline Gradient | SCPHAPCRPHADLPPGKCKDAPNKTKGTQYWCNALRNITAQDIVEAAAKAMELEEKSK* |
Ga0129336_102528612 | 3300010370 | Freshwater To Marine Saline Gradient | CPHAPCRPHAGLPQQKCKDATNKTAKTQMWCNALRNITAQDIVEAAKKAMELEG* |
Ga0129336_102803402 | 3300010370 | Freshwater To Marine Saline Gradient | PCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG* |
Ga0129336_104098781 | 3300010370 | Freshwater To Marine Saline Gradient | HAPCRPHAGLPQQKCKDASNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG* |
Ga0129336_105788321 | 3300010370 | Freshwater To Marine Saline Gradient | KNISVFKPDTCPHAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEEK* |
Ga0129336_107260011 | 3300010370 | Freshwater To Marine Saline Gradient | TCPHAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG* |
Ga0133913_105939751 | 3300010885 | Freshwater Lake | VFKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAQDIVLASQKAIEL* |
Ga0164294_100901184 | 3300013006 | Freshwater | RPHAGLPQAKCKDASNRTPKTQYWCNALRNITAEDIVLASKKAIDLDFEQGETK* |
(restricted) Ga0172372_105414371 | 3300013132 | Freshwater | PHAPCHPQMGLPQAKCKDASNRTKGTQYYCNAIRAITAEMIVGKAKEAMEGQS* |
Ga0119952_10373964 | 3300014050 | Freshwater | PCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEGEIK* |
Ga0119952_10743661 | 3300014050 | Freshwater | CPHAPCRPHAGLPQAKCKDASNKTKGTQYWCNALRHITAQDIVEASMKALELEDKSQETK |
Ga0181364_10406961 | 3300017701 | Freshwater Lake | FYPKSVPVFKPVTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVLASQKAIELGA |
Ga0181364_10785392 | 3300017701 | Freshwater Lake | KNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASRKAMELEEK |
Ga0181363_10050101 | 3300017707 | Freshwater Lake | VFKPDTCPHAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG |
Ga0181347_10852344 | 3300017722 | Freshwater Lake | CRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASHKAMELEQQK |
Ga0181347_10899223 | 3300017722 | Freshwater Lake | PKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMDLEEK |
Ga0181352_10512901 | 3300017747 | Freshwater Lake | HAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELET |
Ga0181356_10316871 | 3300017761 | Freshwater Lake | MNAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASRKAMELEPK |
Ga0181356_11135372 | 3300017761 | Freshwater Lake | FKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEV |
Ga0181356_11657703 | 3300017761 | Freshwater Lake | SFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMDLEEK |
Ga0181358_11529153 | 3300017774 | Freshwater Lake | VSFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVELGA |
Ga0181346_10447724 | 3300017780 | Freshwater Lake | DTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASRKAMELEPK |
Ga0181346_10705441 | 3300017780 | Freshwater Lake | DTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASHKAMELDQQK |
Ga0181346_10823241 | 3300017780 | Freshwater Lake | RMTFYPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIIVASKKAMELEPK |
Ga0181346_11460251 | 3300017780 | Freshwater Lake | DVCPHAPCRPHAGLLQAKCKDATNKTPKTQMWCNAMRNIKAEDIVLASKKAIDLENDK |
Ga0181346_11586401 | 3300017780 | Freshwater Lake | PDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASRKAMELEENK |
Ga0181346_13282221 | 3300017780 | Freshwater Lake | IFKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASHKAMELEE |
Ga0181348_11355011 | 3300017784 | Freshwater Lake | HAPCRPHAGLPQAKCKDASNKTPRTQYWCNALRNITAEDIVVASRKAMELEENK |
Ga0181348_11598011 | 3300017784 | Freshwater Lake | VSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASRKAMELDQQK |
Ga0181348_12305162 | 3300017784 | Freshwater Lake | CKYYPKSYPVFAPDVCPHAPCRPHGALPQAKCKDASNKTKGTQYWCNALRNITAEMIVENAKKAMQPGDVK |
Ga0181348_12656401 | 3300017784 | Freshwater Lake | EERPHGGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASRKAMELEEK |
Ga0181359_10566491 | 3300019784 | Freshwater Lake | YPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEVK |
Ga0181359_10620601 | 3300019784 | Freshwater Lake | CPHAPCRPHGSLPQAKCKDAKNRTSLTQYWCNAIRNISADDIVKASREVFKLENKTMQKV |
Ga0181359_10864281 | 3300019784 | Freshwater Lake | RCKYYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAQDIVEAAKKVVEEVKESK |
Ga0181359_10996963 | 3300019784 | Freshwater Lake | DYPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASHKAMELDQQK |
Ga0181359_11723982 | 3300019784 | Freshwater Lake | VSFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMEEVKESK |
Ga0181359_12134712 | 3300019784 | Freshwater Lake | FKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASRKAMELDQQ |
Ga0181359_12635622 | 3300019784 | Freshwater Lake | NKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVEEVKESK |
Ga0222714_101316661 | 3300021961 | Estuarine Water | FKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAQDIVEASKKAMELETK |
Ga0222713_107461461 | 3300021962 | Estuarine Water | VPVFKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQMWCNALRYITAQDIVEASMKALELEDNSHAKS |
Ga0222712_100627465 | 3300021963 | Estuarine Water | VFKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYFCNALRNITAEDIVAASHKARELEDKQHEENK |
Ga0181354_10795221 | 3300022190 | Freshwater Lake | YYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEVKESK |
Ga0181354_11560751 | 3300022190 | Freshwater Lake | DPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAQDIVLASQKAIELESK |
Ga0181354_11573391 | 3300022190 | Freshwater Lake | KSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVEEIKESK |
Ga0181354_11780311 | 3300022190 | Freshwater Lake | PDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEVKESK |
Ga0181354_12144191 | 3300022190 | Freshwater Lake | VFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEVKESK |
Ga0214917_100214611 | 3300022752 | Freshwater | HAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRHITAQDIVEASMKALELEDKSHATK |
Ga0214921_102425112 | 3300023174 | Freshwater | PHAPCRPHAGLPQAKCKDASNRTPKTQYWCNALRNITAQDIVLASQKAMELESK |
Ga0214921_104423921 | 3300023174 | Freshwater | PDTCPHAPCRPHAGLPQAKCKDAMNKTPKTQYWCNALRNITAEDIVEASKKAMELGA |
Ga0214923_100122781 | 3300023179 | Freshwater | YPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTKGTQYWCNALRHITAQDIVEASMKALELEDKSHATK |
Ga0214923_101746544 | 3300023179 | Freshwater | VFKPDTCPHAPCRPHAGLPQQKCKDASNKTPKTQMWCNALRNITAQDIVEAAKKAMELES |
Ga0214923_101986501 | 3300023179 | Freshwater | KPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRNITAQDIVEASMKALELEDKQHEEKK |
Ga0209864_10343191 | 3300027547 | Sand | PCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVELGEKQHEEKK |
Ga0209597_10607244 | 3300027746 | Freshwater Lake | YSKNVSIFKPDTCPHAPCRPHGGLPQAKCKDASNKTPRTQYWCNALRNITAEDIVVASHKAMELEEK |
Ga0209596_11567801 | 3300027754 | Freshwater Lake | KPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRNIKAEDIVEASMKALELEDKQHEEKK |
Ga0209444_101955591 | 3300027756 | Freshwater Lake | PKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKRVVELGSNG |
Ga0209444_102061042 | 3300027756 | Freshwater Lake | VFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVELGEKK |
Ga0209296_12186011 | 3300027759 | Freshwater Lake | DTCPHAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRNIKAQDIVEASMKALELEDKQHEERK |
Ga0209086_101349784 | 3300027770 | Freshwater Lake | TYYPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRNIKAEDIVEASMKALELEDKQHEEKK |
Ga0209086_103733871 | 3300027770 | Freshwater Lake | PDTCPHAPCRPHAGLPQAKCKDASNRTPKTQYWCNALRNITAEDIVLASKKAMELESK |
Ga0209246_101123791 | 3300027785 | Freshwater Lake | VSFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVLASQKAIELGA |
Ga0209246_101296691 | 3300027785 | Freshwater Lake | HAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASRKAMELGA |
Ga0209353_103711361 | 3300027798 | Freshwater Lake | VSFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMDLEEK |
Ga0209354_100920623 | 3300027808 | Freshwater Lake | TCPHAPCRPHAGLPQAKCKDASNRTPLTQYWCNALRNITAQDIVEASKKAMELGSNG |
Ga0209354_101115291 | 3300027808 | Freshwater Lake | SVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVKLEEVKESK |
Ga0209191_13227413 | 3300027969 | Freshwater Lake | VFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQMWCNALRNIKAQDIVEASMKALELEDKQHEERK |
(restricted) Ga0247832_10829253 | 3300028557 | Freshwater | SVPIFKPDTCPHAPCRPQGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVT |
Ga0119945_10138171 | 3300029933 | Aquatic | NVSVFKPDTCPHAPCRPHGGLPQQKCKDASNKLPKTQYWCNALRNITAQDIVEAAAKAMELENDGQERK |
Ga0307378_111998881 | 3300031566 | Soil | RVLYYPKSVPVFKPDTCPHAPCRPQAGLPQAKCKDATNRTKKTQMWCNALRNITPEDIVEAAKKVVEL |
Ga0307377_103555511 | 3300031673 | Soil | CPHAPCRPQAGLPQAKCKDATNRTKKTQMWCNALRNIAAEDIVEAAKKVVTL |
Ga0315293_109086992 | 3300031746 | Sediment | PHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVELGEKQHEEKK |
Ga0315288_115037741 | 3300031772 | Sediment | YYPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPRTQYWCNALRNITAEDIVVASHKAMELEEKPQGSYRM |
Ga0315290_110239443 | 3300031834 | Sediment | FKPDTCPHAPCRPHAGLPQAKCKDATNKTPKTQYWCNALRNITAEDIVVASHKAMELEEKPQGSYRM |
Ga0315904_104560121 | 3300031951 | Freshwater | NISVFKPDTCPHAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG |
Ga0315294_101979355 | 3300031952 | Sediment | SVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPRTQYWCNALRNITAEDIVVASRKAMELEEK |
Ga0315294_110670001 | 3300031952 | Sediment | PKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVELGEKQHEEKK |
Ga0315289_104346363 | 3300032046 | Sediment | KPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVEEVKEN |
Ga0315289_104708084 | 3300032046 | Sediment | PHAPCRPHAGLPQAKCKDASNKTPRTHYWCNALRNITAEDIVVASRKAMELEEK |
Ga0315289_104791353 | 3300032046 | Sediment | KFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMEEVKESK |
Ga0315289_111780092 | 3300032046 | Sediment | VFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASRKAMELEE |
Ga0315906_103086781 | 3300032050 | Freshwater | YPKNVSVFKPDTCPHAPCRPHAGLPQAKCKDATNKTKGTQYWCNALRNITAQDIVEAAKKAMELEG |
Ga0315284_110684771 | 3300032053 | Sediment | PDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITVEDIVEAAKKVVEEVKESK |
Ga0315284_112911622 | 3300032053 | Sediment | TCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASRKAMELEEK |
Ga0315284_113120501 | 3300032053 | Sediment | VSFYPKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVVASRKAMELEENK |
Ga0315905_107933493 | 3300032092 | Freshwater | CPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVMELGEKK |
Ga0315295_112483351 | 3300032156 | Sediment | VPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIVEAAKKVVEEVK |
Ga0315283_124263262 | 3300032164 | Sediment | YPENVSVFKPDTCPHAPCRPHAGLPQAKCKDASNKTPKTQYWCNALRNITAEDIVVASHKAMELEEK |
Ga0315276_117112051 | 3300032177 | Sediment | PKSVPVFKPDTCPHAPCRPHGGLPQAKCKDATNRTKKTQMWCNALRNITAEDIIEAAKKVVELGEKQHEEKK |
Ga0335048_0427265_2_181 | 3300034356 | Freshwater | FKPDTCPHAPCRPHAGLPQQKCKDATNKTPKTQMWCNALRNITAQDIVEAAKKAMELEG |
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