Metagenome Family F098893

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098893
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	82 residues
Representative Sequence	SGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAILKKL
Number of Associated Samples	72
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.76 %
% of genes near scaffold ends (potentially truncated)	19.42 %
% of genes from short scaffolds (< 2000 bps)	16.50 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (28.155 % of family members)
Environment Ontology (ENVO)	Unclassified (67.961 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.757 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1B570J29032_1089000112 2B570J29032_1092226171 3B570J40625_1000292761 4JGI25908J49247_101648291 5Ga0049080_101168823 6Ga0073913_100546371 7Ga0075464_106337632 8Ga0114973_104238661 9Ga0114973_104585861 10Ga0114973_104667801 11Ga0114962_106564891 12Ga0114977_105310501 13Ga0114978_100462574 14Ga0114978_102847181 15Ga0114981_100229486 16Ga0114981_100454685 17Ga0114981_100667221 18Ga0114970_101637571 19Ga0114969_102039054 20Ga0114969_104459582 21Ga0114974_100087531 22Ga0114976_101618531 23Ga0114972_101303231 24Ga0114958_100911941 25Ga0129333_107350713 26Ga0129336_101606131 27Ga0133913_110340171 28Ga0153800_10345892 29Ga0164295_107625541 30Ga0164295_113588641 31Ga0172365_107631121 32Ga0172366_105261271 33Ga0172363_101277271 34Ga0172363_108211152 35Ga0172362_111207192 36Ga0172362_111371961 37Ga0181347_10581534 38Ga0181347_11226131 39Ga0181347_11632672 40Ga0181362_10939911 41Ga0181365_10006951 42Ga0181365_10785201 43Ga0181365_10970372 44Ga0181365_11094571 45Ga0181365_11095802 46Ga0181365_11103441 47Ga0181356_10088766 48Ga0181356_10984411 49Ga0181358_11068141 50Ga0181358_11560372 51Ga0181349_11119111 52Ga0181349_11314922 53Ga0181349_12696571 54Ga0181346_10737653 55Ga0181348_11280911 56Ga0181348_11392672 57Ga0181355_10150581 58Ga0181355_13608361 59Ga0169931_103781941 60Ga0169931_108226992 61Ga0207193_16877333 62Ga0194124_102269601 63Ga0181354_10050421 64Ga0181351_10488221 65Ga0181351_10837233 66Ga0214917_101825614 67Ga0214921_104020602 68Ga0208974_10907171 69Ga0208975_10034058 70Ga0247836_11011094 71Ga0209297_13760982 72Ga0209189_13473491 73Ga0209596_10092321 74Ga0209598_103177162 75Ga0209500_101293011 76Ga0209353_103873061 77Ga0209354_100149754 78Ga0209354_103881751 79Ga0247837_10283241 80Ga0209299_10367695 81Ga0304730_12441442 82Ga0247832_10267467 83Ga0307380_104798001 84Ga0307379_108179213 85Ga0315293_112292642 86Ga0315288_105364171 87Ga0315290_116059582 88Ga0315297_101125221 89Ga0315297_102145554 90Ga0315297_109323482 91Ga0315294_104763303 92Ga0315294_107424001 93Ga0315274_105987291 94Ga0315274_120349812 95Ga0315284_101263901 96Ga0315284_103672221 97Ga0315295_114620161 98Ga0315276_117589382 99Ga0315275_119724321 100Ga0315273_117664623 101Ga0335027_0633092_13_267 102Ga0335066_0540712_352_612 103Ga0335049_0579137_116_319
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1B570J29032_1089000112 2B570J29032_1092226171 3JGI25908J49247_101648291 4Ga0049080_101168823 5Ga0073913_100546371 6Ga0114973_104585861 7Ga0114962_106564891 8Ga0114970_101637571 9Ga0114969_104459582 10Ga0114976_101618531 11Ga0114958_100911941 12Ga0133913_110340171 13Ga0172366_105261271 14Ga0172362_111371961 15Ga0181347_11226131 16Ga0181365_10006951 17Ga0181365_10970372 18Ga0181365_11095802 19Ga0247832_10267467 20Ga0315294_107424001 21Ga0315275_119724321
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1Ga0181346_10737653 2B570J29032_1092226171 3B570J40625_1000292761 4Ga0049080_101168823 5Ga0114973_104238661 6Ga0114962_106564891 7Ga0114981_100229486 8Ga0114970_101637571 9Ga0114972_101303231 10Ga0129333_107350713 11Ga0129336_101606131 12Ga0133913_110340171 13Ga0164295_107625541 14Ga0172366_105261271 15Ga0172363_108211152 16Ga0172362_111207192 17Ga0181365_10006951 18Ga0181365_11094571 19Ga0181365_11095802 20Ga0181349_11119111 21Ga0181349_11314922 22Ga0169931_103781941 23Ga0169931_108226992 24Ga0247836_11011094 25Ga0209189_13473491 26Ga0247837_10283241 27Ga0315294_107424001 28Ga0315276_117589382 29Ga0335066_0540712_352_612
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.38% β-sheet: 11.54% Coil/Unstructured: 48.08%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02557	VanY	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.97

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300027728\|Ga0247836_1101109	Not Available	1387	Open in IMG/M
3300006805\|Ga0075464_10633763	Not Available	659	Open in IMG/M
3300009068\|Ga0114973_10458586	Not Available	663	Open in IMG/M
3300009068\|Ga0114973_10466780	Not Available	656	Open in IMG/M
3300009181\|Ga0114969_10203905	Not Available	1212	Open in IMG/M
3300009183\|Ga0114974_10008753	Not Available	7400	Open in IMG/M
3300009187\|Ga0114972_10130323	Not Available	1617	Open in IMG/M
3300017723\|Ga0181362_1093991	Not Available	599	Open in IMG/M
3300017736\|Ga0181365_1000695	Not Available	7726	Open in IMG/M
3300017736\|Ga0181365_1110344	Not Available	663	Open in IMG/M

Showing 1 to 10 of 21 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.09%
Terrestrial	Environmental → Terrestrial	2.91%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.17%
Marine	Environmental → Aquatic → Marine	2.91%
Soil	Environmental → Terrestrial → Soil	2.91%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	1.94%
Coastal	Environmental → Aquatic → Marine → Coastal	2.91%
Lake	Environmental → Aquatic → Freshwater → Lake	60.19%
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.98%
Sand	Environmental → Terrestrial → Soil → Sand	0.97%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	22.33%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.86%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	33.01%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	28.16%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	24.27%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.97%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.91%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.94%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	21.36%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.94%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M

Showing 1 to 10 of 72 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1089000112	3300002408	Freshwater	EMEAKWADMKSSSESPIRYVRAALENRETLLGLVKKAEPIQVLQRGGQTLLVPLNAKPELKKAILKAI*
B570J29032_1092226171	3300002408	Freshwater	PVTHIIREDGTRQVTFWFEGGDGDKVRSEMEAKWADMKSNPEAPVRYVKAALENRETLLGLVKRAEPIQVLQRGGQTLLVPLNAKPELKKAILKAI*
B570J40625_1000292761	3300002835	Freshwater	FEGGSSDGVRAEMEAKWADMKSSSESPIRYVRAALENRETLLGLVKKAEPIQVLQRGGQTLLVPLNAKPELKKAILKAI*
JGI25908J49247_101648291	3300003277	Freshwater Lake	EARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL*
Ga0049080_101168823	3300005582	Freshwater Lentic	QADPVTHIVREDGSKQITFWFNSGGSGSTAKKEMEAKWSEMTSDQEAPIRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPINAKPELKKAILRAI*
Ga0073913_100546371	3300005940	Sand	EMERTWADMKSEEEAPIRYVRAALENRETLLGLMKRAEPIMSIKRGGQTLLVSERASPELKRAMLKKL*
Ga0075464_106337632	3300006805	Aqueous	DQDAKAEMERTWADMKSEPEAAIRYVRAALENRETLLGLMKRAEPIMSIKRGSQTLLISERASPELKRTMIKKL*
Ga0114973_104238661	3300009068	Freshwater Lake	GGEGQDAKAEMERTWAEMKSPEDASIRFVRAALENRETLLGLVKRAEKILSIQRGGQTLLVAEKARPELKKALLSRL*
Ga0114973_104585861	3300009068	Freshwater Lake	EGGHRKFTFWFSTGGDQDAKAEMERTWVDMKSEPEAAIRYVRAALENRETLLGLMKRAEPILSIKRGSQTLLISERASPELKRAMIKKL*
Ga0114973_104667801	3300009068	Freshwater Lake	GHRKFTFWFSTGGDQDAKAEMERTWVDMKSEPEAAIRYVRAALENRETLLGLMKRAEPILSIKRGSQTLLISERASPELKRAMIKKL*
Ga0114962_106564891	3300009151	Freshwater Lake	TTQVFEDGRRKVTFWFEVGAAQEAKSEMECSWPDMKSNTESPIRYVRAALENRETLLGLVKRAEPIRVIQRGGQTLLVPENARPELKKALLNKL*
Ga0114977_105310501	3300009158	Freshwater Lake	QFTFWFNISGGEEAKAEMERTWADMKSDEESAIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSERASPELKRAILKKL*
Ga0114978_100462574	3300009159	Freshwater Lake	AEMERTWAEMKSDGESPIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSERASPELKRAMLKKL*
Ga0114978_102847181	3300009159	Freshwater Lake	MERSWTDMRSDNESPIRYVRAALENRETLLGLVKRAEPIRVIQRGGQTLLVPENARPELKKALLNKL*
Ga0114981_100229486	3300009160	Freshwater Lake	AEMERTWTDMKSEPEAAIRYVRAALENRETLLSLMKRAEPILSIKRGSQTLLISERASPELKRAMIKKL*
Ga0114981_100454685	3300009160	Freshwater Lake	RKFTFWFSTSGDQDAKAEMERTWADMKSDPEAAIRYVRAALENRETLLGLMKRAEPIMSIKRGSQTLLISERASPELKRAMLKKL*
Ga0114981_100667221	3300009160	Freshwater Lake	WGDMKSDSESPIRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPINAKPELKKAILRAI*
Ga0114970_101637571	3300009163	Freshwater Lake	RQFTFWFSISDGEEAKAEMERTWANMKSDEEAPIRYVRAALENRETLLGLLKRAEPIMSIQRGGQTLLVSEKASPELKRAILRKL*
Ga0114969_102039054	3300009181	Freshwater Lake	WFSTGGDQDAKAEMERTWADMKSDPEAAIRYVRAALENRETLLGLMKRAEPIMSIKRGSQTLLISERASPELKRTMIKKL*
Ga0114969_104459582	3300009181	Freshwater Lake	SDGNGDIAKKEMERNWADMQSDQESPIRYVRAALENRETLLGLVKRAEPIRIIQIGGQTLMVPENASPERKKALLRHI*
Ga0114974_100087531	3300009183	Freshwater Lake	AKAEMERTWADMKSDSESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAILKKL*
Ga0114976_101618531	3300009184	Freshwater Lake	MDPVTRIQKEDGREQVTFWFMDGGEGQDAKAEMERTWADMKSPEDASIRFVRAALENRETLLGLVKRAEKILSIQRGGQTLLVAEKARPELKKALLSRL*
Ga0114972_101303231	3300009187	Freshwater Lake	CTWADMKSDPEAPIRYVKAALQNRETLLGLMKRAEPILSIKRGSQTLLISEKASPELKRAMIKKL*
Ga0114958_100911941	3300009684	Freshwater Lake	GTMARDEMQCHWSEMKSDIESPIRYIRAALENRETLLGLVKNKVEPIRIIQRGNQTLLIPENAKPELKKAILKHL*
Ga0129333_107350713	3300010354	Freshwater To Marine Saline Gradient	WFQSDGQGDRVRAEMERNWVNMQSDDESPIRYVRAALENRETLLGLVKRAEPIRVIQTGGQTLIVAENARPELKKAILKHI*
Ga0129336_101606131	3300010370	Freshwater To Marine Saline Gradient	EMERTWADMKSAAESAIRYVRAALENRETLLGLMKRAEPILVIKRGEQTLLVPERARPELKRALLEKM*
Ga0133913_110340171	3300010885	Freshwater Lake	RQYTFWFSGGGAEAKTEMECSWSEMKSPAESSIRYVRAALENREAWLSLMKRAEPIMIIKRGEQTLLVPERAKPELKRKLLEKM*
Ga0153800_10345892	3300011995	Freshwater	HIVREDGSKQITFWFNSGGIGNTAKKEMEAKWSEMTSDQEAPIRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPINAKPELKKAILRAI*
Ga0164295_107625541	3300013014	Freshwater	QQQVTFWFISDGNGDIAKKEMERTWADMQSDQESPIRYVRAALENRETLLGLVKRAEPIRIIQIGGQTLMVPENASPERKKALLRHI*
Ga0164295_113588641	3300013014	Freshwater	DTGQRQFTFWFTISGGEEAKAEMERTWADMKSDEESPIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSQRASPELKRAILKKL*
(restricted) Ga0172365_107631121	3300013127	Sediment	DEARREMERKWHEMKSDEESVIRYIRAALENRETLLGLVKRAEPIQVIQRGGQTLIVPLNAKPELKKAILKAI*
(restricted) Ga0172366_105261271	3300013128	Sediment	TFWFEAGEGDEARREMERKWHEMKSDEESVIRYIRAALENRETLLGLVKRAEPIQVIQRGGQTLIVPLNAKPELKKAILKAI*
(restricted) Ga0172363_101277271	3300013130	Sediment	EMERKWHEMKSDEESVIRYIRAALENRETLLGLVKRAEPIQVIQRGGQTLIVPLNAKPELKKAILKAI*
(restricted) Ga0172363_108211152	3300013130	Sediment	FEPGAGDEARREMERKWHEMKSDPEDAVRYVKAALENRETLLGLVKRAEPIQMVQRGGQTLLVPVNAKPELKKAILKAI*
(restricted) Ga0172362_111207192	3300013133	Sediment	SRQVTFWFESGAGGLIKSEMEAKWHEMKSDPEAPVRYVKAALENRETLLGLVKRAEPIQVLQRGGQTLLVPLNAKPELKKAILKAI*
(restricted) Ga0172362_111371961	3300013133	Sediment	NENPVTRMIREDNSQQVTFWFEADGAGARERKEMESNWADMTSDPEHPIRYVRAALENRETLLGLVKRAEPIQIIQRGEQTLIVPLNAPSERKKAILKAI*
Ga0181347_10581534	3300017722	Freshwater Lake	VTCIVEEGGHRKFTFWFSTGDDQDAKAEMERTWADMKSDPESPIRYVRCALENRETLLGLMKRAEPIMSIKRGSQTLLISERASPELKRAMLKKL
Ga0181347_11226131	3300017722	Freshwater Lake	SQSDPITCIIKEDTGQRQFTFWFTISGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAMLKKL
Ga0181347_11632672	3300017722	Freshwater Lake	ERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181362_10939911	3300017723	Freshwater Lake	SSSGPDGEEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181365_10006951	3300017736	Freshwater Lake	VTFWFNAGTGSADAKKQMECKWSEVTADPESPVLYVRAALENRETLLGLCKRAEPIQIISKGGQTLLVPVNAKPELKRAILRAM
Ga0181365_10785201	3300017736	Freshwater Lake	EGGQRQVTFWFSSSGPDGEEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181365_10970372	3300017736	Freshwater Lake	QRQVTFWFSSSGPDGEEARAEMERTWSEMKSDKESAIRFVRAALENRETLLGLCKHKDLQPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181365_11094571	3300017736	Freshwater Lake	CIIKEDTGQRQFTFWFSLDGGEEAKAEMERTWADMKSGEESAIRYVRAALENRKTLLGLLKRAEPVISISRGGQTLLVSERASPELKRSLLKKL
Ga0181365_11095802	3300017736	Freshwater Lake	FWFNDSGTGNAKEEMECGWAQMQSEPEAAVRYIRAALENRETLLGLMKRAEPITAIKRGEQTLLVSERAKPELKRALLNKM
Ga0181365_11103441	3300017736	Freshwater Lake	RKFTFWFSTGDDQDAKAEMERTWADMKSDPESPIRYVRFALENRETLLGLLKRAEPIMSIKRGSQTLLISERASPELKRAMLKKL
Ga0181356_10088766	3300017761	Freshwater Lake	MDPVTCIIKEDTGQRQFTFWFSISGGDDAKAEMERTWADMKSEEEAPIRYVRAALENRETLLGLMKRAEPIMSIKRGGQTLLVSERASPELKRAMLKKL
Ga0181356_10984411	3300017761	Freshwater Lake	FWFSSSGPVGEEARAEMERTWGEMTSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181358_11068141	3300017774	Freshwater Lake	CIIKEDTGQRQFTFWFTISGGDDAKAEMERTWADMKSEPEAAIRYVRGALENRETLLGLMKRAEPILSIKRGGQTLLVSERASPELKRAILKKL
Ga0181358_11560372	3300017774	Freshwater Lake	VEEGGHRKFTFWFSTGDDQDAKAEMERTWADMKSDPESPIRYVRCALENRETLLGLLKRAEPIMSIKRGSQTLLISERASPELKRAMIKKL
Ga0181349_11119111	3300017778	Freshwater Lake	STGDDQDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPILSIRRGSQTLLISERASPELKRAMLKKL
Ga0181349_11314922	3300017778	Freshwater Lake	CIVKADTGQRQVTFWFSSSGPDGEEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181349_12696571	3300017778	Freshwater Lake	PVTCIIKEDTGQRQFTFWFSISGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAILKKL
Ga0181346_10737653	3300017780	Freshwater Lake	SGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAILKKL
Ga0181348_11280911	3300017784	Freshwater Lake	EMERTWADMQSDQESPIRYVRAALENRETLLGLVKRAEPIRIIQIGGQTLMVPENASQERKKALLRHI
Ga0181348_11392672	3300017784	Freshwater Lake	VTCIVKEGGQRQVTFWFSSSGPDGDEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0181355_10150581	3300017785	Freshwater Lake	AKAEMERTWADMKSDPESPIRYVRAALENRETLLSLMKRAEPIMSIQRGGQTLLVSERASPELKRAMLKKL
Ga0181355_13608361	3300017785	Freshwater Lake	QFTFWFTISGGEEAKAEMERTWADMKSDEESPIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSQRASPELKRAILKKL
Ga0169931_103781941	3300017788	Freshwater	SQQVTFWFEADGAGAGERKEMELNWADMTSDPEHPIRYVRAALENRETLLGLVKRAEPIQIIQRGEQTLIVPLNAPSERKKAILKAI
Ga0169931_108226992	3300017788	Freshwater	SGGGGEAREEMERSWSEMQSDVESPIRYVRAALENRETLLGLIKRAEPILVIQRGGQTLLVPERAKPEMKKALLHKL
Ga0207193_16877333	3300020048	Freshwater Lake Sediment	KWHEMKGEEESVIRYIRAALENRETLLGLVKRAEPIQVIQRGGQTLIVPLNAKPELKKAILKAI
Ga0194124_102269601	3300020196	Freshwater Lake	SQQVTFWFVADGAGAREKKEMESNWADMTFDSEHPIRYVRAALENRETLLGLVKRAEPIQIIRMGEQTLIVPLNAPSERKKAILKAI
Ga0181354_10050421	3300022190	Freshwater Lake	RQFTFWFTISGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAMLKKL
Ga0181351_10488221	3300022407	Freshwater Lake	ISGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLGLMKRAEPIMSIQRGGQTLLVSERASPELKRAILKKL
Ga0181351_10837233	3300022407	Freshwater Lake	QLDPVTCIIKEGGQRQVTFWFSSSGPDGDEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0214917_101825614	3300022752	Freshwater	GHRKFTFWFNTGGDQDAKAEMERTWADMKSEPEAAIRYVRAALENRETLLGLMKRAEPILSIKRGSQTLLISERASPELKRAMIKKL
Ga0214921_104020602	3300023174	Freshwater	TGQKQFTFWFTISGGEEAKAEMERTWANMKSDEESPIRYVRAALENRETLLGLMRSAEPIISIQRGGQTLLVSQRASPELKRAMLKKL
Ga0208974_10907171	3300027608	Freshwater Lentic	GSTAKKEMEAKWSEMTSDQEAPIRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPINAKPELKKAILRAI
Ga0208975_10034058	3300027659	Freshwater Lentic	TWADMKSDPESPIRYVRCALENRETLLGLLKRAEPIMSIKRGSQTLLISERASPELKRAMLKKL
(restricted) Ga0247836_11011094	3300027728	Freshwater	HEAKTQMECKWSEMTSEEESPIRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPTNAKPELKKAILKAI
Ga0209297_13760982	3300027733	Freshwater Lake	QFTFWFNISGGEEAKAEMERTWADMKSDEESAIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSERASPELKRAILKKL
Ga0209189_13473491	3300027747	Freshwater Lake	DVRRQTTFWFQADGAGTMARDEMQCHWSEMKSDIESPIRYIRAALENRETLLGLVKNKVEPIRIIQRGNQTLLIPENAKPELKKAILKHL
Ga0209596_10092321	3300027754	Freshwater Lake	TEAKAEMECSWPDMKSAKESPIRYVRAALENRETLLGLVKRAEPIRIIQRGGQTLYVPENARPELKKALLNKL
Ga0209598_103177162	3300027760	Freshwater Lake	FWFSTGGDQDAKAEMERTWVDMKSEPEAAIRYVRAALENRETLLGLMKRAEPILSIKRGSQTLLISERASPELKRAMIKKL
Ga0209500_101293011	3300027782	Freshwater Lake	ERTWAEMKSDGESPIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSERASPELKRAMLKKL
Ga0209353_103873061	3300027798	Freshwater Lake	FWFSLDGGEEAKAEMERTWADMKSGEESAIRYVRAALENRETLLGLLKRAEPVISISRGGQTLLVSERASPELKRSLLKKL
Ga0209354_100149754	3300027808	Freshwater Lake	DPVTCIIKEDTGQRQFTFWFTISGGDDAKAEMERTWADMKSDPESPIRYVRAALENRETLLSLMKRAEPIMSIQRGGQTLLVSERASPELKRAMLKKL
Ga0209354_103881751	3300027808	Freshwater Lake	AEMERNWVDMKSDPESAIRYVRAALENRETLLGLMKRAEPIMSIKRGSQTLLISERASPELKRAMLKKL
(restricted) Ga0247837_10283241	3300027970	Freshwater	NPVTRMIREDGSQQVTFWFDADGRGSRERKEMERNWADMTCDSEDAIRYVRAALENRETLLGLVKRAEPIQIIQRGEQTLLVPLNASSERKKAILKAL
Ga0209299_10367695	3300027974	Freshwater Lake	MERTWTDMKSEPEAAIRYVRAALENRETLLSLMKRAEPILSIKRGSQTLLISERASPELKRAMIKKL
Ga0304730_12441442	3300028394	Freshwater Lake	MERSWPDMKSDKESPIRYVRAALENRETLLGLVKRAEPIRVIQRGGQTLLVPENARPELKKALLNKL
(restricted) Ga0247832_10267467	3300028557	Freshwater	RERKEMERNWADMTCDSEDAIRYVRAALENRETLLGLVKRAEPIQIIQRGEQTLLVPLNASSERKKAILKAL
Ga0307380_104798001	3300031539	Soil	ENPVTRMLREDGSQQVTFWFDADGRGSRERKEMEANWSDMTCDSEDAIRYVRAALENRETLLGLVKRAEPIQIIQRGEQTLLVPLNASSERKKAILKAL
Ga0307379_108179213	3300031565	Soil	KEMEANWADMTCDSEDAIRYVRAALENRETLLGLVKRAEPIQIIQRGEQTLLVPLNASSERKKAILKAL
Ga0315293_112292642	3300031746	Sediment	SGPDGEEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0315288_105364171	3300031772	Sediment	TFWFSSSGPDGDEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0315290_116059582	3300031834	Sediment	CIVKDGQRQFTFWFNDSGTGNAKEEMECGWAQMQSEPEAAIRYIRAALENRETLLGLMKRAEPITAIKRGEQTLLVSERAKPELKRALLNKM
Ga0315297_101125221	3300031873	Sediment	IVKDGQRQFTFWFNDSGTGNAKEEMECGWAQMQSEPEAAIRYIRAALENRETLLGLMKRAEPITAIKRGEQTLLVSERAKPELKRALLNKM
Ga0315297_102145554	3300031873	Sediment	EAKKQMECKWSEVTADPESPVLYVRAALENRETLLGLVKRAEPIQIISRGGQTLLVPVNAKPELKRAILRAM
Ga0315297_109323482	3300031873	Sediment	TFWFNAGTGSAEAKKQMECKWSEVTADPESPVLYVRAALENRETLLGLVKRAEPIQIISRGGQTLLVPVNAKPELKRAILRAM
Ga0315294_104763303	3300031952	Sediment	GEEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0315294_107424001	3300031952	Sediment	AGSGGITEKMEMERTWADMKCDIESPIRYMRAVLENRETLLGLVKRTEVVRFIRTGEQTLLVAENARPELKKAILKHI
Ga0315274_105987291	3300031999	Sediment	PVTCIVKEGGQRQVTFWFSSSGPDGEEARAEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0315274_120349812	3300031999	Sediment	GNAKEEMECGWAQMKSEPEAAVRYIRAALENRETLLGLMKRAEPITAIKRGEQTLLVSERAKPELKRALLNKM
Ga0315284_101263901	3300032053	Sediment	MERTWADMKSEPEAAIRYVRGALENRETLLGLMKRAEPILSIKRGSQTLLISERASPELKRAMLKKL
Ga0315284_103672221	3300032053	Sediment	VTCIVKDGQRQFTFWFNDSGTGNAKEEMECGWAQMQSEPEAAIRYIRAALENRETLLGLMKRAEPITAIKRGEQTLLVSERAKPELKRALLNKM
Ga0315295_114620161	3300032156	Sediment	DTGQRQFTFWFTISGGEEAKAEMERTWADMKSDEESPIRYVRAALENRETLLGLMKRAEPIISIQRGGQTLLVSQRASPELKRAILKKL
Ga0315276_117589382	3300032177	Sediment	HIVKEDGSRQVTFWFNSGEGAEAKAEMERNWGDMKSDSESPVRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPINAKPELKRAILKAI
Ga0315275_119724321	3300032401	Sediment	GSRQVTFWFNSGEGAEAKAEMERNWGDMKSDSESPVRYVRAALENRETLLGLVKRAEPIQIIKRGGQTLLVPINAKPELKKAILRAI
Ga0315273_117664623	3300032516	Sediment	AEMERTWGEMKSDKESAIRFVRAALENRETLLGLVKRAEPILSIQRGGQTLLVPEKARPELKRALLNKL
Ga0335027_0633092_13_267	3300034101	Freshwater	VTFWFVSDGAGDVAKKEMERNWVEMQSDEESPIRYVRAALENRETLLGLVKRAEPIRIIQVGGQTLLVPENASPERKKALLRHI
Ga0335066_0540712_352_612	3300034112	Freshwater	QKQFTFWFTISGGEEAKAEMERTWANMKSDEESPIRYVRAALENRETLLGLMRSAEPIISIQRGGQTLLVSQRASPELKRAMLKKL
Ga0335049_0579137_116_319	3300034272	Freshwater	MEAKWADMKSSSESPIRYVRAALENRETLLGLVKKAEPIQVLQRGGQTLLVPLNAKPELKKAILKAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters