Metagenome / Metatranscriptome Family F098870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098870
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	123 residues
Representative Sequence	MTRTLTVLALAALVVGSAMPGAAAELQPLMAGWERVFTVHWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAGGKVTNQRVAWVPGDVLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Number of Associated Samples	93
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.76 %
% of genes near scaffold ends (potentially truncated)	39.81 %
% of genes from short scaffolds (< 2000 bps)	75.73 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (15.534 % of family members)
Environment Ontology (ENVO)	Unclassified (25.243 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.010 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 12.18% β-sheet: 39.10% Coil/Unstructured: 48.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00072	Response_reg	37.86
PF02735	Ku	3.88
PF01590	GAF	3.88
PF13186	SPASM	1.94
PF11906	DUF3426	0.97
PF09678	Caa3_CtaG	0.97
PF07690	MFS_1	0.97
PF13561	adh_short_C2	0.97
PF09335	SNARE_assoc	0.97
PF08402	TOBE_2	0.97
PF12836	HHH_3	0.97
PF12680	SnoaL_2	0.97
PF04389	Peptidase_M28	0.97
PF12706	Lactamase_B_2	0.97
PF13185	GAF_2	0.97
PF01075	Glyco_transf_9	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	3.88
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.97
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.97
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	72.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	72.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	72.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	70.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2352745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1923	Open in IMG/M
3300000550\|F24TB_13350353	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300000956\|JGI10216J12902_108204090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1982	Open in IMG/M
3300003987\|Ga0055471_10295035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300003993\|Ga0055468_10233906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300004052\|Ga0055490_10135628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715	Open in IMG/M
3300004114\|Ga0062593_100705688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	985	Open in IMG/M
3300004156\|Ga0062589_100521136	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1008	Open in IMG/M
3300004463\|Ga0063356_100608661	All Organisms → cellular organisms → Bacteria → Proteobacteria	1479	Open in IMG/M
3300004799\|Ga0058863_10579797	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300005093\|Ga0062594_101644930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300005334\|Ga0068869_100830019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300005340\|Ga0070689_100393307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1170	Open in IMG/M
3300005440\|Ga0070705_101095496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300005530\|Ga0070679_101252917	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300006049\|Ga0075417_10035341	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300006049\|Ga0075417_10096906	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300006844\|Ga0075428_100138301	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300006844\|Ga0075428_101706441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300006845\|Ga0075421_100477470	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300006852\|Ga0075433_10552389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1012	Open in IMG/M
3300006853\|Ga0075420_100496603	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300006854\|Ga0075425_102238064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300006969\|Ga0075419_10413019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300009148\|Ga0105243_10461247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1195	Open in IMG/M
3300009156\|Ga0111538_10907942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1115	Open in IMG/M
3300009157\|Ga0105092_10021151	All Organisms → cellular organisms → Bacteria	3424	Open in IMG/M
3300009545\|Ga0105237_12328196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300010371\|Ga0134125_12937898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300010399\|Ga0134127_11876098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300010403\|Ga0134123_10465100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1180	Open in IMG/M
3300012349\|Ga0137387_10259963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1252	Open in IMG/M
3300012355\|Ga0137369_10050458	All Organisms → cellular organisms → Bacteria → Proteobacteria	3645	Open in IMG/M
3300012358\|Ga0137368_10610644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300012360\|Ga0137375_10011765	All Organisms → cellular organisms → Bacteria → Proteobacteria	10356	Open in IMG/M
3300012582\|Ga0137358_10610448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300012922\|Ga0137394_10494386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1039	Open in IMG/M
3300012923\|Ga0137359_10868561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300012929\|Ga0137404_10583851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1003	Open in IMG/M
3300014265\|Ga0075314_1148241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300014271\|Ga0075326_1255479	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300014272\|Ga0075327_1018133	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300014873\|Ga0180066_1049305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	830	Open in IMG/M
3300014884\|Ga0180104_1118944	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300017997\|Ga0184610_1002316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4317	Open in IMG/M
3300018000\|Ga0184604_10294965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300018028\|Ga0184608_10003916	All Organisms → cellular organisms → Bacteria → Proteobacteria	4664	Open in IMG/M
3300018031\|Ga0184634_10029653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2155	Open in IMG/M
3300018052\|Ga0184638_1012381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2917	Open in IMG/M
3300018056\|Ga0184623_10342750	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300018059\|Ga0184615_10278737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	934	Open in IMG/M
3300018059\|Ga0184615_10301330	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	893	Open in IMG/M
3300018059\|Ga0184615_10726984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300018061\|Ga0184619_10016583	All Organisms → cellular organisms → Bacteria	2983	Open in IMG/M
3300018063\|Ga0184637_10159955	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1388	Open in IMG/M
3300018074\|Ga0184640_10035427	All Organisms → cellular organisms → Bacteria → Proteobacteria	2005	Open in IMG/M
3300018077\|Ga0184633_10526196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300018079\|Ga0184627_10051490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2128	Open in IMG/M
3300018082\|Ga0184639_10113471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1434	Open in IMG/M
3300018084\|Ga0184629_10276456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300018422\|Ga0190265_10467729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1369	Open in IMG/M
3300019233\|Ga0184645_1334883	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300019249\|Ga0184648_1083576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300019249\|Ga0184648_1477992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300019259\|Ga0184646_1567279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300020018\|Ga0193721_1111524	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300020068\|Ga0184649_1096535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1687	Open in IMG/M
3300021090\|Ga0210377_10005250	All Organisms → cellular organisms → Bacteria	10679	Open in IMG/M
3300021090\|Ga0210377_10031903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3755	Open in IMG/M
3300022534\|Ga0224452_1086440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300025917\|Ga0207660_10158208	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1746	Open in IMG/M
3300025921\|Ga0207652_11883605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300025930\|Ga0207701_10232946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1611	Open in IMG/M
3300026089\|Ga0207648_11614794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300027722\|Ga0209819_10282189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300027873\|Ga0209814_10037390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2013	Open in IMG/M
3300027909\|Ga0209382_10000053	All Organisms → cellular organisms → Bacteria	152063	Open in IMG/M
3300027909\|Ga0209382_11241716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300028592\|Ga0247822_10517349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300028608\|Ga0247819_10370289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	820	Open in IMG/M
3300028807\|Ga0307305_10406471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300028809\|Ga0247824_10048995	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300028828\|Ga0307312_10949614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300030006\|Ga0299907_10023177	All Organisms → cellular organisms → Bacteria → Proteobacteria	4710	Open in IMG/M
3300030006\|Ga0299907_10122784	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300030619\|Ga0268386_10000163	All Organisms → cellular organisms → Bacteria	39714	Open in IMG/M
3300030904\|Ga0308198_1093540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300031114\|Ga0308187_10206938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	690	Open in IMG/M
3300031228\|Ga0299914_10009816	All Organisms → cellular organisms → Bacteria → Proteobacteria	7293	Open in IMG/M
3300031421\|Ga0308194_10157221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	706	Open in IMG/M
3300031421\|Ga0308194_10254341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300031424\|Ga0308179_1051999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300031548\|Ga0307408_100352579	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300031716\|Ga0310813_10009716	All Organisms → cellular organisms → Bacteria	6179	Open in IMG/M
3300031858\|Ga0310892_10016600	All Organisms → cellular organisms → Bacteria	3151	Open in IMG/M
3300031949\|Ga0214473_11419101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300032002\|Ga0307416_100790863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1044	Open in IMG/M
3300032013\|Ga0310906_10173828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1282	Open in IMG/M
3300034178\|Ga0364934_0020726	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300034178\|Ga0364934_0231780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300034661\|Ga0314782_138597	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300034663\|Ga0314784_167030	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300034672\|Ga0314797_101312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.61%
Host-Associated	Host-Associated	20.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.51%
Aquatic	Environmental → Aquatic	30.10%
Plants	Host-Associated → Plants	19.42%
Human	Host-Associated → Human	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.57%
Sediment	Environmental → Aquatic → Sediment	18.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.50%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Marine	Environmental → Aquatic → Marine	2.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Floodplain	Environmental → Terrestrial → Floodplain	1.94%
Digestive System	Host-Associated → Human → Digestive System	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.74%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.94%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.97%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	15.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23527452	3300000033	Soil	MRRTLTVLGLATIVVGAAGPVVAAELQPLMAGWERVFTVDWQAAQYRGQPAVEGYVNNISPYHTIRIRIMVESLDAGGQVTNQKIAWLSGDLLGGGRMFFQVPTAAAPSYRVRVFSYDRGELDSNFR*
F24TB_133503532	3300000550	Soil	MRRLVIVLGLAGVVAGTASPTAAAELQPLMLGWERLFTVDWQSAQYRGKPVVEGYVTNVSPYHTTNIRVLVESLDAGGQVTGQQVAWVPGELLGGARVFFQVPAAPA
JGI10216J12902_1082040903	3300000956	Soil	MRRLLIVLGLAGVVAGTASPTAAAELQPLMLGWERLFTVDWQSAQSRGKPVVEGYVTNVSPYHTTNIRVLVESLDAGGQVTGQQVAWVPGELLGGARVFFQVPAAPAPAYRVRVFSYDR
Ga0055471_102950351	3300003987	Natural And Restored Wetlands	MRRTLAVLWLAMLVVGAARPGAVAELQPLMAGWERGFSVSWQPGQYRGQPSVEGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVLVFSYDRVELDGNFR*
Ga0055468_102339061	3300003993	Natural And Restored Wetlands	MMKRTLTILWFATLMAGAPLPGAAAPLEPLMVGWERLFSVSWGPGEYRGQPSVEGYVDNISPYHTSNIRILVESMDAGGQVTNQRIAWLSGDLLGGGRLFFQVPTPSAPSYRVRVFSYDRVELDGDFN*
Ga0055490_101356281	3300004052	Natural And Restored Wetlands	MRRMSMIACLVVLMAAPAAPGMAAELEPLMAGWERLFSVTWEPGLYRGQPAVQGYVNNVSPYSTTNIRIMVESLDAGGQVTSQHIAWVPGELLGGNRLAFQVPATPAANYRVRVFSYDRLELDGGDFR*
Ga0062593_1007056881	3300004114	Soil	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR*
Ga0062589_1005211362	3300004156	Soil	MRRTVAILWLVVIVVGVTLPVAAAELQPLMAGWERVFSVNWQPSQYRGKPAVEGYVNNISPYSTTNIRIIVDSMDAGGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRMEFDGNFR*
Ga0063356_1006086612	3300004463	Arabidopsis Thaliana Rhizosphere	MKRTLTTLGLATLVLGAALPGAAAELEPLMAGWERVFSVDWQPGQYRGKPSVEGYVSNNSPYHTNNIRIIIDSLDAGGQVINQQIAWVPGDLLGGSRLFFQVPTQPAPSYRVRVFSYDRVELDGNFR*
Ga0058863_105797971	3300004799	Host-Associated	LWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR
Ga0062594_1016449302	3300005093	Soil	MRRTVAILWLVMIVAGVALPVAAAELQPLMAGWERVFSVNWQPSQYRGKPAVEGYVNNISPYSTTNIRIIVDSMDAGGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRMEFDGNFR*
Ga0068869_1008300191	3300005334	Miscanthus Rhizosphere	MRRTVAILWLVVIVVGVTLPVAAAELQPLMAGWERVFSVNWQPSQYRGKPAVEGYVNNISPYSTTNIRIIVDNMDAAGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRMEFDGNFR*
Ga0070689_1003933071	3300005340	Switchgrass Rhizosphere	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVDNMDAAGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRM
Ga0070705_1010954961	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSGGEGISMRRVLIILVLSAIALVPVLPTSAAEIQPQMAGWERNFTVTWEPGTYRGKPVVEGYVNNVSPYSTRSIRLLVDSLDAAGNVTNQRVEWLAGDLLGGGRLFFQVPAAPAPSYRVRVFSYDRIEVDGPMR*
Ga0070679_1012529172	3300005530	Corn Rhizosphere	GTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR*
Ga0075417_100353412	3300006049	Populus Rhizosphere	MRRLVIVLGLAGVVAGTASPTAAAELQPLMLGWERLFTVDWQSAQYRGKPVVEGYVTNVSPYHTTNIRVLVESLDAGGQVTGQQVAWVPGELLGGARVFFQVPAAPAPAYRVRVFSYDRLEMDGKIR*
Ga0075417_100969061	3300006049	Populus Rhizosphere	MRRALTVLGLAILAIGAAWPIAAAELQPLMAGWERVFSIDWQPGQYRGKPGIEGYLNNISPYSVTNIRLIVEGMDAGGQVINQKIAWVPGDVLGGSRLFFQVPTTPAPNYRVRVFSYDRVELDGNFR*
Ga0075428_1001383015	3300006844	Populus Rhizosphere	MRRLLTAFGFVVAVVGAAMPGTAAEMQPLMAGWERLFTVAWQPAQHRGNPVVEGYVTNVSPYHTTNIRVLVESLDASGGVTSQRVAWVPGELLGGGRAFFQVPAAPAPAYRVRIFSYDRIEMDGNFR*
Ga0075428_1017064411	3300006844	Populus Rhizosphere	TLTILGLVTSVVGAAWPVVAAELHPLMAGWERVFTIDWQAGQYRGQPAVEGYVNNISPYHLTKIRIIVESLDAGGQVTNQQIAWLSGDVLGGGRMFFQVPTATAPSYRVRVFSYDRGELDSNFR*
Ga0075421_1004774702	3300006845	Populus Rhizosphere	MKRTLTMLGLATLVLGAALPGAAAELEPLMAGWERVFSVDWQPGQYRGKPSVEGYVSNNSPYHTNNIRIIIDSLDAGGQVINQQIAWVPGDLLGGSRLFFQVPTQPAPSYRVRVFSYDRVELDGNFR*
Ga0075433_105523891	3300006852	Populus Rhizosphere	MRRLLIVLGLAGVLAGTASPTAAAELQPLMLGWERLFTVDWQSAQYRGKPVVEGYVTNVSPYHTTNIRVLVESLDAGGQVTGQQVAWVPGELLGGARVFFQVPTAP
Ga0075420_1004966032	3300006853	Populus Rhizosphere	MRRTLTILGLVTSVVGAAWPVVAAELHPLMAGWERVFTIDWQAGQYRGQPAVEGYVNNISPYHLTKIRIIVESLDAGGQVTNQQIAWLSGDVLGGGRMFFQVPTATAPSYRVRVFSYDRGELDSNFR*
Ga0075425_1022380642	3300006854	Populus Rhizosphere	MRRLLIVLGLAGVLAGTASPTAAAELQPLMLGWERLFTVDWQSAQYRGKPVVEGYVTNVSPYHTTNVRVLVESLDAGGQVTGQQVAWVPGELLGGARVFFQVPAAPAPAYRVRVFSYDRLEMDGKIR*
Ga0075419_104130193	3300006969	Populus Rhizosphere	MRRALTVLGLAILAIGAAWPIAAAELQPLMAGWERVFSIDWQPGQYRGKPGIEGYLNNISPYSVTNIRLIVEGMDAGGQVINQKIAWVPGDVLGGSRLFFQV
Ga0105243_104612471	3300009148	Miscanthus Rhizosphere	ALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR*
Ga0111538_109079421	3300009156	Populus Rhizosphere	LAILAIGAAWPIAAAELQPLMAGWERVFSIDWQPGQYRGKPGIEGYLNNISPYSVTNIRLIVEGMDAGGQVINQKIAWVPGDVLGGSRLFFQVPTTPAPNYRVRVFSYDRVELDGNFR*
Ga0105092_100211512	3300009157	Freshwater Sediment	MRRTLTVLWLATLVVGAARPGAVAELQPLMAGWERVFSVSWQPGQYRGQPSVEGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVHVFSYDRVELDGNFH*
Ga0105237_123281962	3300009545	Corn Rhizosphere	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQP
Ga0134125_129378981	3300010371	Terrestrial Soil	VAAAELQPLMAGWERVFSVNWQPSQDRGKPAVEGYVNNISPYSTTNIRIIVDSMDAGGQVTHQQIAYLPGDLLGGGRIFFQVPTQLSPNYRVRVFSYDRMEFDGNFR*
Ga0134127_118760982	3300010399	Terrestrial Soil	ALPVAAAELQPLMAGWERVFSVNWQPSQYRGKPAVEGYVNNISPYSTTNIRIIVDNMDAAGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRMEFDGNFR*
Ga0134123_104651003	3300010403	Terrestrial Soil	LPVAAAELQPLMAGWERVFSVNWQPSQYRGKPAVEGYVNNISPYSTTNIRIIVDSMDAGGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRMEFDGNFR*
Ga0137387_102599632	3300012349	Vadose Zone Soil	MTRTLTVLGLAALVVGSAMPGAASELQPLMAGWERVFTVNWQPAEYRGRPAVEGYVNNVSPYHTVNLRVLIESLDTAGTVTNQQIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRVEAPSNLR*
Ga0137369_100504585	3300012355	Vadose Zone Soil	MKRTLTMLGLAVLVVGSAMPAAAAELQPMMAGWERIFTVDWQPAEYRGKPTVEGYVNNVSPYNTRSIRVLVERLDTAGQVTNQQIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGTFR*
Ga0137368_106106441	3300012358	Vadose Zone Soil	MKRTLTMLGLAVLVVGSAMPAAAAELQPMMAGWERIFTVDWQPAEYRGEPTVEGYVNNVSPYNTRSIRVLVERLDTAGQVTNQQIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGTFR*
Ga0137375_100117657	3300012360	Vadose Zone Soil	MKRTLTMLGLAVLVVGSAMPAAAAELQPMMAGWERIFTVDWQPAEDRGEPTVEGYVNNVSPYNTRSIRVLVERLDTAGQVTNQQIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGTFR*
Ga0137358_106104481	3300012582	Vadose Zone Soil	MTRVLTILALVVIVLARALPAPAAELQPLMAGWERYFTVTWQPVKYRGTPVVEGYINNVSPYSTRGIRVLVDSVDVAGHVTNQQVAWVPGDLLGGGRLFFQVPAAPSPAYRVRVFSYDRVEVESPIR*
Ga0137394_104943862	3300012922	Vadose Zone Soil	MTRTLPVLALAALVIGSAMPGAAAELQPLNAGWERVFTVSWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDVAGKVTNQNIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR*
Ga0137359_108685612	3300012923	Vadose Zone Soil	MTRVLTILALVVIVLARALPAPAAELQPLMAGWERYFTVTWQPVEYRGTPVVEGYINNVSPYSTRGIRVLVDSVDVAGHVTNQQVAWVPGDLLGGGRLFFQVPAAPSPAYRVRV
Ga0137404_105838512	3300012929	Vadose Zone Soil	MTRVLTILALVVIVLAPALPAPAAELQPLMAGWERYFTVTWQPVEYRGTPVVEGYINNVSPYSTRGIRVLVDSVDVAGHVTNQQVAWVPGDLLGGGRLFFQVPAAPSPAYRVRVFSYDRVEVESPIR*
Ga0075314_11482411	3300014265	Natural And Restored Wetlands	MMKRTLTILWFATLMVGAPLPGAAAPLEPLMAGWERLFSVSWGPGEYRGQPSVEGYVDNISPYHTSNIRILVESMDAGGQVTNQQIAWLSGDLLGGGRLFFQVPTPSAPSYRVRVFSYDRVELDGDFN*
Ga0075326_12554791	3300014271	Natural And Restored Wetlands	MRRTLTVLWLAMLVVGAARPGAVAELQPLMAGWERVFSVSWQPGQYRGQPSVEGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVHVF
Ga0075327_10181333	3300014272	Natural And Restored Wetlands	MRRTLTVLWLAMLVVGAARPGAVAELQPLMAGWERVLSVSWQPGQYRGQPSVEGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVHVFSYDRVELDGNFR*
Ga0180066_10493052	3300014873	Soil	MTRTLTVLALAALVVGSAMPGATAELQPLMAGWERVFTVHWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAGGKVTNQRVAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIDLDGGNFR*
Ga0180104_11189441	3300014884	Soil	MTRTLTVLALAALVVGSAMPGTAAELQPLMAGWERVFTVNWQPTERRGRPTVEGYVNNVSPYHTANIRVLIESLDAAGKITNQHIAWVPGDVLGGGRLFFQVPTAPAPVYRVRVFSYDRIELDGNFR*
Ga0184610_10023164	3300017997	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLNAGWERVFTVNWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGKVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0184604_102949651	3300018000	Groundwater Sediment	TMRGTLTVLGLAAIVVGAAWPVAAAEMQPLMAGWERVFSVDWQAGQYRGQPAVEGYVNNISPYHTTKIRILVESLDAGGQVTNQKIAWLSGDLLGGGRIFFQVPTAAAPSYRVRVFSYDRGELDGNFR
Ga0184608_100039162	3300018028	Groundwater Sediment	MTRTLTVLALAVLVVGSAMPGAAAELQPQMAGWERVFTVNWQPAEYRGKPAVEGYVNNVSPYHTANIRVLIESLDAAGKVTNQHIAWLPGDMLGGGRLFFQVPTAPAPAYRVRVFSYDRIEMDGNFR
Ga0184634_100296532	3300018031	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLMGGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGAFR
Ga0184638_10123812	3300018052	Groundwater Sediment	MTRTLTVLALAVLVVGSAMPGAAAELQPLNAGWERLFTVNWQPAEYRGKPAVEGYVNNVSPYHTANIRVLIESLDAAGKVTNQHIAWLPGDMLGGGRLFFQVPTAPAPAYRVRVFSYDRIEMDGNFR
Ga0184623_103427501	3300018056	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLNAGWERVFTVNWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0184615_102787371	3300018059	Groundwater Sediment	LVVGSAMPGAAAELQPLMAGWERVFTVSWAPAQYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQHIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0184615_103013301	3300018059	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLMAGWERVFTVHWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAGGKVTNQRVAWVPGDVLGGGRLFFQVPTAPAPAYRVRVFSYDRVEVDGGNLR
Ga0184615_107269841	3300018059	Groundwater Sediment	MTRTLTILALAALVVGSAMPGAAAELQPLMGGWERVFTVSWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIESLDAAGKITNQHVAWVPGDLLGGGRLFFQVPAAPAPAYRVRVFSYDRVEVDGGNLR
Ga0184619_100165834	3300018061	Groundwater Sediment	MTRTLRVLALAALVVGSAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGQVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEAPGNFR
Ga0184637_101599552	3300018063	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLMAGWERLFTVNWQPAEYRGKPAVEGYVSNVSPYHTGNIRVLIESLDAAGKVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0184640_100354273	3300018074	Groundwater Sediment	MTRTLTVLALAALVVGSAMAGAAAELQPLMGGREWVFTVNWQPAQYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGKVTNQHIAWVPGDLLGGGRLFFQVPTAPASAYRVRVFSYDRIELDGGNFR
Ga0184633_105261961	3300018077	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLNAGWERVFTVNWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGKVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRI
Ga0184627_100514903	3300018079	Groundwater Sediment	MTRTLTVLALAALVIGSAMPGAAAELQPLMGGWERVFTVSWQPAQHRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGKVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGAFR
Ga0184639_101134712	3300018082	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLNAGWERLFTVNWEPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGKVTNQHVTWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGTFR
Ga0184629_102764562	3300018084	Groundwater Sediment	MTRTLTVLALAALVVGSAMPGAAAELQPLNAGWERLFTVSWQPAEYRGKPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQRVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0190265_104677294	3300018422	Soil	MKRALTILCFAILVVAAALPSAAAELQPLMAGWERVFSVNWQAGQYRGKPSVEGYVNNISPYQTTNIRIIVESMDAGGQVTNQQIAWLPGDLLGDGRLYFQVPTPPAPSYRVRVFS
Ga0184645_13348831	3300019233	Groundwater Sediment	RTMTRTLTVLALAVLVVGSAMPGAAAELQPLNAGWERLFTVNWQPAEYRGKPAVEGYVNNVSPYHTANIRVLIESLDAAGKVTNQHIAWLPGDMLGGGRLFFQVPTAPAPAYRVRVFSYDRIEMDGNFR
Ga0184648_10835761	3300019249	Groundwater Sediment	RTMTRTLTVLALAALVVGSAMPGAAAELQPLMLGWERVFTVSWQPGQYRGRPAVEGNVNNVSPYHTGNIRVLIESLDAAGTVTNQKIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIEMDGGNFR
Ga0184648_14779922	3300019249	Groundwater Sediment	WTMTRTLMVLALAALVVGSAMPGAAAELQPLNAGWERLFTVSWQPAEYRGKPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQRVAWLPGDMVGGGRLFFQVPTVPAPAYRVRIFSYDRIELDGGSFR
Ga0184646_15672792	3300019259	Groundwater Sediment	RTMTRTLTVLALAALVVGSAMPGAAAELQPLNAGWERVFTVNWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQHVAWLPGDMVGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0193721_11115241	3300020018	Soil	MTRTLRVLALAALVVGSAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGQVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEA
Ga0184649_10965353	3300020068	Groundwater Sediment	TILALAALVVGSAMPGAAAELQPLMAGWERVFTVHWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAGGKVTNQRVAWVPGDVLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0210377_100052503	3300021090	Groundwater Sediment	MTRTLTILALAALVVGSAMPGAAAEPQPLMAGWERVFTVSWAPAQYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAAGTVTNQHIAWVPGDLLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0210377_100319034	3300021090	Groundwater Sediment	MTRTLTILALAALVVGSAMPGAAAELQPLMAGWERVFTVSWQGAQYRGRPAVEGYVNNVSPYHTVNIRVLIESLDAAGKITNQHVAWVPGDLLGGGRLFFQVPAAPAPAYRVRVFSYDRVEVDGGNLR
Ga0224452_10864401	3300022534	Groundwater Sediment	MTRTLTVLALAVLVVGSAMPGAAVELQPLNAGWERLFTVNWQPAEYRGKPAVEGYVNNVSPYHTANIRVLIESLDAAGKVTNQHIAWLPGDMLGGGRLFFQVPTAPAPAYRVRVFSYDRIEMDGNFR
Ga0207660_101582082	3300025917	Corn Rhizosphere	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR
Ga0207652_118836051	3300025921	Corn Rhizosphere	MRRTVAILWLVMIVAGVALSVAAAELQPLMAGWERVFSVNWQPSQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR
Ga0207701_102329462	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR
Ga0207648_116147941	3300026089	Miscanthus Rhizosphere	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVDNMDAAGQVTHQQIAYLPGDLLGGGRIFFQVPTQPSPNYRVRVFSYDRMEFDGNFR
Ga0209819_102821891	3300027722	Freshwater Sediment	MRRTLTVLWLATLVVGAARPGAVAELQPLMAGWERVFSVSWQPGQYRGQPSVEGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVHVFSYDRVELDGNFH
Ga0209814_100373903	3300027873	Populus Rhizosphere	MRRLVIVLGLAGVVAGTASPTAAAELQPLMLGWERLFTVDWQSAQYRGKPVVEGYVTNVSPYHTTNIRVLVESLDAGGQVTGQQVAWVPGELLGGARVFFQVPAAPAPAYRVRVFSYDRLEMDGKIR
Ga0209382_1000005349	3300027909	Populus Rhizosphere	MRRALTVLGLAILAIGAAWPIAAAELQPLMAGWERVFSIDWQPGQYRGKPGIEGYLNNISPYSVTNIRLIVEGMDAGGQVINQKIAWVPGDVLGGSRLFFQVPTTPAPNYRVRVFSYDRVELDGNFR
Ga0209382_112417161	3300027909	Populus Rhizosphere	MKRTLTMLGLATLVLGAALPGAAAELEPLMAGWERVFSVDWQPGQYRGKPSVEGYVSNNSPYHTNNIRIIIDSLDAGGQVINQQIAWVPGDLLGGSRLFFQVPTQPAPSYRVRVFSYDRVELDGNFR
Ga0247822_105173492	3300028592	Soil	MRRTLTILGLVTSVVGAAWPVVAAELQPLMAGWERVFTIDWQAGQYRGQPAVEGYVNNISPYHLTKIRIIVESLDTGGQVTNQQIAWLSGDVLGGGRMFFQVPTATAPSYRVRVFSYDRGELDSNFR
Ga0247819_103702892	3300028608	Soil	MRRTLTILGLVTSVVGAAWPVVAAELHPLMAGWERVFTIDWQAGQYRGQPAVEGYVNNISPYHLTKIRIIVESLDAGGQVTNQQIAWLSGDVLGGGRMFFQVPTAPE
Ga0307305_104064712	3300028807	Soil	LRVLALAALVVGSAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGQVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEAPGNFR
Ga0247824_100489953	3300028809	Soil	MRRTLTILGLVTSVVGAAWPVVAAELQPLMAGWERVFTIDWQAGQYRGQPAVEGYVNNISPYHLTKIRIIVESLDAGGQVTNQQIAWLSGDVLGGGRMFFQVPTATAPSYRVRVFSYDRGELDSNFR
Ga0307312_109496141	3300028828	Soil	ELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGQVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEAPGNFR
Ga0299907_100231775	3300030006	Soil	MGRRLMILWLALLGLGAAGPGAAAGLTPLMAGWEQVFSVDWQPGQYRGKPAVEGYVNNISPYHTKNIRIMVESLDPGGRVTNQQVAWLPGDLLGGGRLFFQVPTTPAPGYRVSVFSYDRVELDGDFN
Ga0299907_101227841	3300030006	Soil	MRRTLTVLWLATLVVGAARPGAVAELQPLMAGWERMFSVSWQPGQYRGQPSVAGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVHVFSYDRVELDGNFR
Ga0268386_1000016315	3300030619	Soil	MRRTLTVLWLATLVLGAARPGAVAELQPLMAGWERVFSVSWQPGQFRGQPSVEGYVNNISPYHTNNIRIMVESLDAGGQVTNQQVAWLPGDLLGGGRLFFQVPTAPASSYRVHVFSYDRVELDGNFR
Ga0308198_10935401	3300030904	Soil	RTLTVLALAALVVGSAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGTVTNQQIAWVPGDLLGGGRLFFQVPTAQAPAYRVRVFSYDRTEAPGNFR
Ga0308187_102069382	3300031114	Soil	SAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGQVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEAPGNFR
Ga0299914_100098166	3300031228	Soil	MRRTLTMLGFAMLLVGATGPGAAAELQPLVAGWEQVFSVDWQPGQYRGKPSVEGYLTNISPYHTNNVRIMVESLDAGGQVTDQQIAWLPGDLLGGGRLFFQVPAPPSPSYRVRVFSYDRVEQDGDFN
Ga0308194_101572211	3300031421	Soil	TMTRTLTVLALAALVVGSAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGTVTNQQIAWVPGDLLGGGRLFFQVPTAQAPAYRVRVFSYDRTEAPGNFR
Ga0308194_102543411	3300031421	Soil	MTRTLRVLALAALVVGSAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIESLDAAGTVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEAPGNFR
Ga0308179_10519991	3300031424	Soil	CIEPCAETPASPLTGLPCSSVVLPVAAAMPGAAAELQPQMAGWERVFTVNWQPAQYRGRPAVEGYVNNVSPYHTVNIRVLIENLDAAGQVTNQQVAWVPGELLGGGRLFFQVPTVPAPAYRVRVFSYDRTEAPGNFR
Ga0307408_1003525791	3300031548	Rhizosphere	PSAAAELEPLMAGWERVFSVDWQPGQYRGKPSVEGYVNNVSPYHTNNIRIIVESMDAGGQVTNQQIAWLPGELLGGGRLFFQVPTPPAPSYRVRVFSYDRVELDGNFR
Ga0310813_100097168	3300031716	Soil	MSGGEGISMRRVLIILVLSAIALVPVLPTSAAEIQPQMAGWERNFTVTWEPGTYRGKPVVEGYVNNVSPYSTRSIRLLVDSLDAAGNVTNQRVEWLAGDLLGGGRLFFQVPAAPAPSYRVRVFSYDRIEVDGPMR
Ga0310892_100166006	3300031858	Soil	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDTGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYR
Ga0214473_114191011	3300031949	Soil	MTRTLTVLALAALVVGSAMPGAAAELQPLMAGWERVFTVHWQPAEYRGRPAVEGYVNNVSPYHTGNIRVLIESLDAGGKVTNQRVAWVPGDVLGGGRLFFQVPTAPAPAYRVRVFSYDRIELDGGNFR
Ga0307416_1007908632	3300032002	Rhizosphere	MRRMLTTLWLATLVVGVALPSAAAELEPLMAGWERVFSVDWQPGQYRGKPSVEGYVNNVSPYHTNNIRIIVESMDAGGQVTNQQIAWLPGELLGGGRLFFQVPTPPAPSYRVRVFSYDRVELDGNFR
Ga0310906_101738281	3300032013	Soil	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDTGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPN
Ga0364934_0020726_67_450	3300034178	Sediment	MRRTLTILGLVTVMLGAAGPGVGAELQPLMAGWERVFTVSWQPGQHRGKPVVEGYVTNVSPYETTQIRVLVESLDTAGQVTGQRIAWVPGDLGGGGRLFFQVPAAPAPAYRVRIFSYDRVERDGNFR
Ga0364934_0231780_9_380	3300034178	Sediment	MVLALAALVVGSAMPGAAAELQPLNAGWERLFTVNWQPAEYRGKPAVEGYVNNVSPYHTGNIRVLIESLDTAGTVTNQRIAWLPGDMVGGGRLFFQVPTAPAPAYRVRIFSYDRIELDGGSFR
Ga0314782_138597_3_368	3300034661	Soil	LLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPL
Ga0314784_167030_118_501	3300034663	Soil	MRRTVALLWLALIVVGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDTGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR
Ga0314797_101312_219_590	3300034672	Soil	SSPTFQVSPWLGTALPVAAAELQPLMAGWERVFSVDWQPGQYRGKPAVEGYVNNISPYSTTNIRIIVESMDAGGQVTHQQVAYLPGDLLGGGRLFFQVPTQPSPNYRVRVFSYDRIELDGPLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences