Metagenome Family F098857

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098857
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	82 residues
Representative Sequence	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSA
Number of Associated Samples	81
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.06 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	97.09 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.262 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.417 % of family members)
Environment Ontology (ENVO)	Unclassified (30.097 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 13.51% β-sheet: 17.12% Coil/Unstructured: 69.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01810	LysE	26.21
PF16363	GDP_Man_Dehyd	9.71
PF06724	DUF1206	2.91
PF12840	HTH_20	2.91
PF01370	Epimerase	2.91
PF00106	adh_short	1.94
PF08240	ADH_N	1.94
PF00561	Abhydrolase_1	0.97
PF08447	PAS_3	0.97
PF04545	Sigma70_r4	0.97
PF13673	Acetyltransf_10	0.97
PF13950	Obsolete Pfam Family	0.97
PF00248	Aldo_ket_red	0.97
PF00563	EAL	0.97
PF13386	DsbD_2	0.97
PF08327	AHSA1	0.97
PF12770	CHAT	0.97
PF13396	PLDc_N	0.97
PF01243	Putative_PNPOx	0.97
PF13578	Methyltransf_24	0.97
PF12680	SnoaL_2	0.97
PF12802	MarR_2	0.97
PF13191	AAA_16	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.97
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.97
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.97
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.26 %
Unclassified	root	N/A	8.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.26 %
Unclassified	root	N/A	8.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.26 %
Unclassified	root	N/A	8.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.73 %
Unclassified	root	N/A	8.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.73 %
Unclassified	root	N/A	8.74 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	53.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.65 %
Unclassified	root	N/A	8.74 %

Name	Rank	Taxonomy	Distribution
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	46.60 %
Unclassified	root	N/A	8.74 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.85 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	3.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.94 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples	0.97 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.97 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	46.60 %
Unclassified	root	N/A	8.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	3.88 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.94 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples	0.97 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	46.60 %
Unclassified	root	N/A	8.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	3.88 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.94 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	0.97 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.97 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	46.60 %
Unclassified	root	N/A	8.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3.88 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.94 %
Agromyces flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces flavus	0.97 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.97 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	46.60 %
Unclassified	root	N/A	8.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3.88 %
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	0.97 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.97 %
Agromyces flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces flavus	0.97 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.97 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0851094	Not Available	900	Open in IMG/M
3300003373\|JGI25407J50210_10124055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	636	Open in IMG/M
3300004153\|Ga0063455_101310700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	552	Open in IMG/M
3300004479\|Ga0062595_102178249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	542	Open in IMG/M
3300004480\|Ga0062592_102148882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	555	Open in IMG/M
3300004778\|Ga0062383_10481725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	619	Open in IMG/M
3300005093\|Ga0062594_100381499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300005093\|Ga0062594_101257811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	739	Open in IMG/M
3300005093\|Ga0062594_101926628	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005328\|Ga0070676_10820152	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005343\|Ga0070687_101506555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300005356\|Ga0070674_102061646	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005549\|Ga0070704_102130523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	521	Open in IMG/M
3300005562\|Ga0058697_10622311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	566	Open in IMG/M
3300005564\|Ga0070664_100359449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1326	Open in IMG/M
3300005615\|Ga0070702_101459570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	561	Open in IMG/M
3300005718\|Ga0068866_11151626	Not Available	558	Open in IMG/M
3300005841\|Ga0068863_102627079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	512	Open in IMG/M
3300006058\|Ga0075432_10579506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	511	Open in IMG/M
3300006844\|Ga0075428_101517870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300006847\|Ga0075431_100602922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1082	Open in IMG/M
3300006853\|Ga0075420_100802340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	811	Open in IMG/M
3300006871\|Ga0075434_102631081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	503	Open in IMG/M
3300006881\|Ga0068865_101851036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	546	Open in IMG/M
3300006918\|Ga0079216_10339306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	911	Open in IMG/M
3300006918\|Ga0079216_10866014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	675	Open in IMG/M
3300009100\|Ga0075418_10304459	Not Available	1699	Open in IMG/M
3300009100\|Ga0075418_11998658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300009147\|Ga0114129_11539311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300009147\|Ga0114129_11781235	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300009147\|Ga0114129_12039906	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300009148\|Ga0105243_11695556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	661	Open in IMG/M
3300009156\|Ga0111538_10452812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces flavus	1627	Open in IMG/M
3300009156\|Ga0111538_13228024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	568	Open in IMG/M
3300009162\|Ga0075423_10700532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300009789\|Ga0126307_11078956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	649	Open in IMG/M
3300009840\|Ga0126313_10644519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	855	Open in IMG/M
3300010037\|Ga0126304_10078685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2053	Open in IMG/M
3300010037\|Ga0126304_10927656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	592	Open in IMG/M
3300010038\|Ga0126315_10595044	Not Available	714	Open in IMG/M
3300010040\|Ga0126308_10832651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	640	Open in IMG/M
3300010044\|Ga0126310_10110851	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300010045\|Ga0126311_10479129	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300010045\|Ga0126311_11210572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300010166\|Ga0126306_11124333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	644	Open in IMG/M
3300010403\|Ga0134123_11993230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	639	Open in IMG/M
3300011119\|Ga0105246_11789460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	587	Open in IMG/M
3300012985\|Ga0164308_12085312	Not Available	528	Open in IMG/M
3300013306\|Ga0163162_12837273	Not Available	558	Open in IMG/M
3300013307\|Ga0157372_12151337	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300013308\|Ga0157375_13622024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	514	Open in IMG/M
3300014263\|Ga0075324_1052907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	795	Open in IMG/M
3300014268\|Ga0075309_1058458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300014302\|Ga0075310_1007240	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300014325\|Ga0163163_11710201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300014745\|Ga0157377_10815196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	689	Open in IMG/M
3300015372\|Ga0132256_103645051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	518	Open in IMG/M
3300015374\|Ga0132255_101970302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	889	Open in IMG/M
3300017965\|Ga0190266_10808779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300018432\|Ga0190275_10289454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1600	Open in IMG/M
3300018432\|Ga0190275_10411986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1364	Open in IMG/M
3300018466\|Ga0190268_11926804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	539	Open in IMG/M
3300018469\|Ga0190270_10850860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	924	Open in IMG/M
3300018469\|Ga0190270_12263056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300018481\|Ga0190271_11238529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300018920\|Ga0190273_10714443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	779	Open in IMG/M
3300018920\|Ga0190273_11334657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	621	Open in IMG/M
3300019377\|Ga0190264_10089969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1402	Open in IMG/M
3300025901\|Ga0207688_10039931	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300025907\|Ga0207645_10617565	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300025918\|Ga0207662_10541053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	806	Open in IMG/M
3300025918\|Ga0207662_10953546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	608	Open in IMG/M
3300025932\|Ga0207690_10430065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1058	Open in IMG/M
3300025932\|Ga0207690_10649801	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300025935\|Ga0207709_11418723	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025945\|Ga0207679_11445718	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300025972\|Ga0207668_11838814	Not Available	546	Open in IMG/M
3300026035\|Ga0207703_11981059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	559	Open in IMG/M
3300028587\|Ga0247828_11084767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	529	Open in IMG/M
3300028596\|Ga0247821_10794765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	623	Open in IMG/M
3300028597\|Ga0247820_11061039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	580	Open in IMG/M
3300028597\|Ga0247820_11221533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	543	Open in IMG/M
3300028608\|Ga0247819_11081774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	511	Open in IMG/M
3300028771\|Ga0307320_10125485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300028876\|Ga0307286_10387415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	523	Open in IMG/M
3300028878\|Ga0307278_10328205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	675	Open in IMG/M
3300028881\|Ga0307277_10342228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	666	Open in IMG/M
3300028889\|Ga0247827_10296265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300030006\|Ga0299907_10698288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	777	Open in IMG/M
3300030006\|Ga0299907_11020534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	606	Open in IMG/M
3300030336\|Ga0247826_10320229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1119	Open in IMG/M
3300030336\|Ga0247826_11159309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	619	Open in IMG/M
3300031228\|Ga0299914_10211731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300031228\|Ga0299914_11579736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	508	Open in IMG/M
3300031547\|Ga0310887_10846232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300031716\|Ga0310813_12273735	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031824\|Ga0307413_10646446	Not Available	872	Open in IMG/M
3300031824\|Ga0307413_11284973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	640	Open in IMG/M
3300031824\|Ga0307413_11906444	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031995\|Ga0307409_102664215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	528	Open in IMG/M
3300032080\|Ga0326721_10666818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300032080\|Ga0326721_10843015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.22%
Host-Associated	Host-Associated	40.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.25%
Plants	Host-Associated → Plants	40.78%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.80%
Roots	Host-Associated → Plants → Roots	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Phylloplane	Host-Associated → Plants → Phylloplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.74%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.62%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08510941	3300000033	Soil	MRCAALVIAACLLAPATASAQRVEDTFFNSVIPSXVDHLIXFTPTTFAIHPLGQRVVPITVRVGGRTHRYIFGNAAAA
JGI25407J50210_101240552	3300003373	Tabebuia Heterophylla Rhizosphere	MYRVAAVLAALLLLPATASAQRVEDTFFNSVIPSRIDHLIGFSTTTFAIHPQGQRVVPITVRVGGRTYRYIFGNAAAVVGPSAKL
Ga0063455_1013107002	3300004153	Soil	MRRPGVLLTVVISSLVLLPVSASEARVRYAFFNSSIPTRIDHLIGFTPTTYAIHPPGQRVTPITVRVGGRQYRYVFDNAAAGVGGSATMYLKM
Ga0062595_1021782491	3300004479	Soil	MRWPALLVAASLLVPAAASARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRVVPITVTVGGRRYRYIFDNAAAAVGPSANIYIRNMLRARRYPS
Ga0062592_1021488821	3300004480	Soil	MRCAALVIAACLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAMYPPGQPIVPIKVRVGGRTYRYIFGNAAAAVGPTANIYMRNIPGAALPEPARNLPRPSAQGR*
Ga0062383_104817251	3300004778	Wetland Sediment	MPRVTLALAVLLLAPAPASAREVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGERVVPITVRLGGRTYRYIFGNAS
Ga0062594_1003814991	3300005093	Soil	MRWPALIVAAVLALPAAASARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPIGQRVVPITVRVGGRRYRFIFDNAAAVVGPSSG
Ga0062594_1012578111	3300005093	Soil	MRRPVLIILATSLLLPATASARAQSAFFNSAIPSRIDHLIGFTPTTFAIHPIGQRIVPITVNVGGRRYRYIFDNAAANVGPSVNFWVKNLLRDRRYPSPQ
Ga0062594_1019266281	3300005093	Soil	MRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPPGQPLKPIVVKVGGRTHRYIFG
Ga0070676_108201521	3300005328	Miscanthus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSA
Ga0070687_1015065551	3300005343	Switchgrass Rhizosphere	MRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFG
Ga0070674_1020616462	3300005356	Miscanthus Rhizosphere	MRCTVLALALCLFAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERVKPITVRVGGKTHRYIFG
Ga0070704_1021305231	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFGSAAAVVGPSAGI
Ga0058697_106223112	3300005562	Agave	MRRLALAVAVVMLTPATASAQKVEDTFFNSVIPSRVDHLIGFTPTTFAMYPRGKRIVPITVRVGGRTYRYIFGDAAAAVGPSANIYLRNMIRM
Ga0070664_1003594493	3300005564	Corn Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNA
Ga0070702_1014595701	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRLATFALAVLLLAPATASARKVEDTFFNSIIPTRVDHLIGFTPTTFAIHPRDQRVVPITVRVGGRTYRYTFGNAAAVVGPSAGIYLRNMIRMRRYPSPQGI
Ga0068866_111516262	3300005718	Miscanthus Rhizosphere	MRRLGLALALLLFAPATASARVEDAFFNSHIPIRVDHLIGFAPTTMAIHPPGQRLVPIKVRVGGRTY
Ga0068863_1026270791	3300005841	Switchgrass Rhizosphere	MRILLGVVAGLLLVPASASAQRVEDAFFNSVIPSRVDHLIGFTPTTFAIHPRDQRLTPIKVRVGGRTHRYVFSNAAAVVGPSADIYLRNMIRGRRYPSPQGIFVD
Ga0075432_105795061	3300006058	Populus Rhizosphere	MRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVRVGGRRYRYIFDNAAAAVGPSANIYIRNMLRARRY
Ga0075428_1015178702	3300006844	Populus Rhizosphere	MRWPALVIAACLLLPATASARAQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVTVGGRRYRYIFDNAAAAVG
Ga0075431_1006029222	3300006847	Populus Rhizosphere	MRWVALFIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGQRVEPITVRVGGRTHRYTFGNAAAVVGPSANIYMRNMIRARRYPSP
Ga0075420_1008023401	3300006853	Populus Rhizosphere	MRLVGLLIAAFLLAPATASAQRVEDTFFNSVIPARIDHLIGFTPTTFAIHPLGQRVEPITVRVGGRTHRYTFGNAAAAVGPSANIYMRNMIR
Ga0075434_1026310811	3300006871	Populus Rhizosphere	MRWPALIVAACLLIPATASARPQSAFFNSVIPSRVDHLIGFTPTTYAIHPIGQRVVPITVRVGGRRYRYIFDNAAAGVGPSAGLILRNMIRNRRYPS
Ga0068865_1018510361	3300006881	Miscanthus Rhizosphere	MRPLLIVLAVVLMAPATASARPVEDAYFNSFISSRVDHLIGFTPTTFAIHPAGKRVVPIKVRVGGRG
Ga0079216_103393062	3300006918	Agricultural Soil	MRRLLAVFIAAFLLAPATASARGVEDTFFNSIIPSRVDHLIGFTPTTFAMYPPGQRIVPIRVRVGGRTYRYVFGNAAAAVGPSANIYLRNMIRMRRY
Ga0079216_108660143	3300006918	Agricultural Soil	MRRATLALAVLLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGERVVPIT
Ga0075418_103044595	3300009100	Populus Rhizosphere	MRRATLALAILLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGKRVVPITVRFGGRTYRYTFGN
Ga0075418_119986582	3300009100	Populus Rhizosphere	MRPLALLIALLLLAPATASAQRAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGQRVVPITVRVGGRTHRYIFGNAAAVVGPSANIYLRNMI
Ga0114129_115393112	3300009147	Populus Rhizosphere	MRWVALSIAAFLLAPASASAQRVQDTFFNSVIPSRVDHLIGFTPTTFAIHPIGQRVEPITVRVGGRTYRYTFGNAAAAVGPSANI
Ga0114129_117812351	3300009147	Populus Rhizosphere	MRYFAVGLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPVGKPIRPITVRVGGKTHRYIFGNAAAVVGPSPP*
Ga0114129_120399062	3300009147	Populus Rhizosphere	MRLVGLLIAAFLLAPATASAQRVEDTFFNSVIPARIDHLIGFTPTTFAIHPLGQRVEPITVRVGGRTHRYTFG
Ga0105243_116955563	3300009148	Miscanthus Rhizosphere	MRCAALFIAACLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGQRVVPITVRVGGRT
Ga0111538_104528123	3300009156	Populus Rhizosphere	MRWPALVVAACLLIPATASARPQSAFFNSVIPSRVDHLIGFTPTTYAIHPLGQRVVPITVRVGGRRYRYIFDNAAAVVGPSARLY
Ga0111538_132280241	3300009156	Populus Rhizosphere	MRCAALVIAAFLLAPATASARRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPPTQRVEPISVRVGGRNHRYTFGNAAAVVGPSANIYLR
Ga0075423_107005323	3300009162	Populus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYI
Ga0126307_110789562	3300009789	Serpentine Soil	MRYFAVTLLACLLAPAAASAGKAEDTFFNSVIPLRVDHLIGFTPTTFAIHPAGKPLEPITVRIGGRTHRYVFGNASAAVGPSAGIYMRNMIEQRRHPSPQGI
Ga0126313_106445191	3300009840	Serpentine Soil	MRWPALAVAALLLVPATASAQRVEDTLFNSIIPSRIDHVIGFTPTTFAIHPAGQRVRPITVRVGGRTYRYVFGNAAAAVGPSAGIYMRNMI
Ga0126304_100786856	3300010037	Serpentine Soil	MRRATLALAVLLLAPAAASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVQFGGRTYR
Ga0126304_109276562	3300010037	Serpentine Soil	MRWPAVVVAAFLLAPTTASAQQVQDTFFNSLIPSRVDHLIGFTPTTFAMYPRGERVVPITVRVGGRRYRYIFDNAAAAVGPTA
Ga0126315_105950441	3300010038	Serpentine Soil	VRVLPLVLATLLGAPATASAQRVEDTFFNSVIPSRIDHVIGFTPTTFAIHPVGERVVPIKVRVGGRTYRYIFGNASAAVGPSAD
Ga0126308_108326512	3300010040	Serpentine Soil	MRRATLALAVLLLAPAAASARKVQDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVQF
Ga0126310_101108511	3300010044	Serpentine Soil	MRWPTLIIVAALLVLPATASAGVEHAFYNSVIPMRIDHLIGFTPTTYAIHPPNQRVVPISVTVAGRRHRFIFDNAAAWVGPS
Ga0126311_104791291	3300010045	Serpentine Soil	MRYFAVTLLACLLAPAAASARKAEDTFFNSVIPLRVDHLIGFTPTTFAIHPAGKPLEPITVRIGGR
Ga0126311_112105722	3300010045	Serpentine Soil	MRWPVLLIAASLLVPTAASARPQSAFFNSVIPSRVDHLIGFTPTTFAIHPQGQRIVPITVRVGGRRYRYIFDNAAAAVGPSA
Ga0126306_111243332	3300010166	Serpentine Soil	MVRIALALALVMLAPAAASAQKAEDTFFNSIIPSRVDHLIGFTPTTFAMYPRGQRIVPITVRVGGRTYRYIFGNAAAAVGPSANIYLRNMIRMRRYPSPQGIFLDR
Ga0134123_119932302	3300010403	Terrestrial Soil	MRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFGSAAAVVGPSAGIYMRNMIKGRRH
Ga0105246_117894602	3300011119	Miscanthus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMRNMIKGRRYPS
Ga0164308_120853122	3300012985	Soil	MRILLGVVVALLSVPASASAQRVEDAFFNSVIPIRVDHLIGFTPTTFAIHPRDQQVVPIKVRVGGR
Ga0163162_128372731	3300013306	Switchgrass Rhizosphere	MRRLGLALAMLLLAPATASARKVEDASFNSVIPSRVDHLIGFTPTTFAIHPPGQRLVPIKVRFGGRTHRYVFGNASAVVG
Ga0157372_121513372	3300013307	Corn Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAG
Ga0157375_136220242	3300013308	Miscanthus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMRNMIKGRRYP
Ga0075324_10529072	3300014263	Natural And Restored Wetlands	MRRPALALFVAAFLLAPATASAQRVEDTFFNSVIPNRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRKHRYIFGNAAAVVGPTADIYMRNMIRA
Ga0075309_10584581	3300014268	Natural And Restored Wetlands	MRRPAVALLVAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGG
Ga0075310_10072403	3300014302	Natural And Restored Wetlands	MRRPALALFVAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRKHRYIFGNAAAVVGPTADIYMRNMIRARRFPS
Ga0163163_117102011	3300014325	Switchgrass Rhizosphere	MRRPVLIILATSLLLPATASARAQSAFFNSAIPSRIDHLIGFTPTTFAIHPIGQRIVPITVNVGGRRYRYIFDNAAANV
Ga0157377_108151961	3300014745	Miscanthus Rhizosphere	MRCTVLAVALCLLAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERIEPITVRTGGKTHRYIFGNAAAVVGPSAGIYLRNMIRQRR
Ga0132256_1036450511	3300015372	Arabidopsis Rhizosphere	MRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGCTPTTFAIHPMGQRIVPITVRVGG
Ga0132255_1019703021	3300015374	Arabidopsis Rhizosphere	MRWPAIVIAAFLVAPATASAQRVEHAFFNSAIPSRVDHLIGFTPTTFAIHPAGQRIVPITVLVGGRRHRFVFDNAAAAVGPS
Ga0190266_108087792	3300017965	Soil	MRWPALVIGVFLLAPATASAQRVQDTFFNSIIPSRVDHLIGFTPTTFAMYPRGERVVPITVRVGGRRYR
Ga0190275_102894542	3300018432	Soil	MRRLALALAVLLLAPATASAQKVEDTFFNSVIPTRVDHLIGFTPTTFAMYPRGERIVPVTVRVGGRTYRYIFGNAAVVVGPSANIYLRNPIRMRRYPS
Ga0190275_104119861	3300018432	Soil	MLRPTLALAMLLIAPVTAEAAKVQDTFYNSVIPSRVDHLIGFAPTSFGIHPRDEPLRPLTVRVRGRTYRYLFSTASAV
Ga0190268_119268041	3300018466	Soil	MRWPALVIAAFLLTPATASAQRVEDTFFNSIIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGDRRYRYIFGNAAAAVGPSANIYLRN
Ga0190270_108508602	3300018469	Soil	MRGAILAVAVTLLVPAPASARKAEDTFFNSVIPIRVDHLIGFTPTTFVIHPIGKPVVPITVRVGGRTYRYTFGNAAAAVGPSAGIYMRNMIGERRNPS
Ga0190270_122630561	3300018469	Soil	MRWPALVIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAMYPRGERIVPITVRVGGR
Ga0190271_112385291	3300018481	Soil	MRWPALVIAAFLLAPATASAQRVQDTFFNSIIPSRVDHLIGFTPTTFAMYPRGERIVPI
Ga0190273_107144432	3300018920	Soil	MRRVTLALAVLLLAPATASARKVEDTFFNSIIPSRVDHLIGFTPTTFAIHPRGERVVPI
Ga0190273_113346571	3300018920	Soil	VRSPALIVAALLLAPATASAQRVQDTFFNSVIPSRVDHLIGFTPTTFAMYPRGQRVVPITVRVGGRTYRYIFGNAAAVV
Ga0190264_100899692	3300019377	Soil	MRWPALFIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFAPTTFGIHPSGQRVVPIAVRVGGRRYRYIFGNAQRGWARRPTST
Ga0207688_100399314	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVR
Ga0207645_106175651	3300025907	Miscanthus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMR
Ga0207662_105410532	3300025918	Switchgrass Rhizosphere	MRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFGNAAAVVGPSAGIYMRN
Ga0207662_109535461	3300025918	Switchgrass Rhizosphere	MRILLGVVAGLLLVPASASAQRVEDAFFNSVIPSRVDHLIGFTPTTFAIHPRDQRLTPIKVRVGGRTHRYVFSNAAAVVGPSADIYLRNMI
Ga0207690_104300651	3300025932	Corn Rhizosphere	MRWAALVVAACLLIPATASAARPQSAFFNSFIPTRVDHLIGFTPTTFAIHPIGQRVVPITVRVGGRRYRYIFDNAAAGVGP
Ga0207690_106498012	3300025932	Corn Rhizosphere	MRHFAVLLAVLLLAPASASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRP
Ga0207709_114187231	3300025935	Miscanthus Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAV
Ga0207679_114457182	3300025945	Corn Rhizosphere	MRHFAVVLAVLLLAPATATAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPPGQPLKPIVVKVG
Ga0207668_118388141	3300025972	Switchgrass Rhizosphere	MRRLGLALALLLFAPATASARVEDAFFNSHIPIRVDHLIGFAPTTMAIHPPGQRLVPIKVRVGGRTYRYVFGNAAAVVGPSG
Ga0207703_119810591	3300026035	Switchgrass Rhizosphere	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMRNM
Ga0247828_110847672	3300028587	Soil	MRRATLALAILLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVRFGGRTYRYTFGNAAAAVGPSADIYLRNMIRARRYPS
Ga0247821_107947651	3300028596	Soil	MRLATFALAVLLLAPATASARKVEDTFFNSIIPTRVDHLIGFTPTTFAIHPRDQRVVPITVRVGGRTYRYTFGNAAAVVGPSAGIYLRNMIRMRRY
Ga0247820_110610392	3300028597	Soil	MRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVRVGGRRYRYIFDNAAAAVGPS
Ga0247820_112215332	3300028597	Soil	MPRVTLALAILLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVRFGGRTYRYTFGNAAAAVGPSADIYLRNMIRARRYPSPQGIFLD
Ga0247819_110817742	3300028608	Soil	MRCSVLAVALCLLAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERVKPITVRVGGKTHRYIFGNAAAVVG
Ga0307320_101254851	3300028771	Soil	MRWPVLIVAACLLIPATASAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPAGQRVVPITVRVGGR
Ga0307286_103874151	3300028876	Soil	MRWPALVIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAMYPRGERIVPITVRVGGRRYRYIFGNAA
Ga0307278_103282052	3300028878	Soil	MRCWPALVIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRR
Ga0307277_103422282	3300028881	Soil	MRWPVLLVAAWLLLPATASARPQSAFFNSVIPSRVDHLIGFTPTTFAIHPPGQRVVPITVRVGGRRYRYIFDNAAAVVGPSANIYLRNILRARRYPTPE
Ga0247827_102962652	3300028889	Soil	MRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVRVGGRRYRYIFDNAAAAVGPSAN
Ga0247827_110972652	3300028889	Soil	MSTRLMRWPALIVAASLVLPAAASAQRPESTFFNSIIPSRVDHLIGFTPTTFGIHPAGQRVVPIAVQVGGRRYRFIFGNASAVVGPSAGLYLKN
Ga0299907_106982881	3300030006	Soil	MRWLPLFILAFLIAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRKHRYTFGNAAAAVGPTAN
Ga0299907_110205342	3300030006	Soil	MRWSVLIVAALLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLDQRLVPIKVRVRGRTYRYVFGNAAAV
Ga0247826_103202291	3300030336	Soil	MRWPALLVAACLLIPGTASAARPQSAFFNSIIPTRVDHLIGFTPTTFAIHPAGQRVVPITVRVGGRRYRYIFDNAAAVVGPSARLYL
Ga0247826_111593092	3300030336	Soil	MLIAVAALVLAAPATASAQRVEDAFFNSVIPSRVDHLIGFATTTFAIHPPDEPLRPITVRVGGKT
Ga0299914_102117311	3300031228	Soil	MRRPALALCVAAFLLAPASASAQRVEDTFFNSVIPSRVDPLIGFTPTTFAIHPRGQRVVPIT
Ga0299914_115797361	3300031228	Soil	VRWPALLIAALVVAPSAASAQRAEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPIAVRVDGRSYRYVFGNAAAVVGPTADIYLRNMINQRRFP
Ga0310887_108462322	3300031547	Soil	MRCTVLALALCLFAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERIEPITVRTGGKTHRYIFGNA
Ga0310813_122737351	3300031716	Soil	MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAA
Ga0307413_106464461	3300031824	Rhizosphere	MRVLPLVLATLLGAPATASAQRVEDTYFNSVIPSRIDHVIGFTPTTFAIHPVGERVVPIKVRVGGRTHRYIFG
Ga0307413_112849732	3300031824	Rhizosphere	MRHFAVVLVVCLLAPAAASARKAEDTFFNSVIPMRVDHLIGFIPTTFAIHPAGRRVVPITVRAGGKTHRYIFGNAAAAVGPTAGIYMRNMI
Ga0307413_119064442	3300031824	Rhizosphere	MRYFAVTLLACLLAPATASARKAEDTFFNSVIPLRVDHLIGFTPTTFAIHPAGKPLEPITVRIGGRTHRYVFGNASA
Ga0307409_1026642151	3300031995	Rhizosphere	MRVLPLVLATLLGAPATASAQRVEDTYFNSVIPSRIDHVIGFTPTTFAIHPVGERVVPIKVRVGGRTHRYIFGNASAAVGPSADIYLRN
Ga0326721_106668181	3300032080	Soil	MRWPALIVAASLLLIPATASARPQSAFFNSVIPTRVDHLIGFTPTTFAIHPAGQRVVPISVRVGGRRYRYIFDNAAAV
Ga0326721_108430151	3300032080	Soil	MRRLTLALAVLLLAPATASARKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGEPLVPITVRVGGRTYRYIFGSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098857

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences