NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098840

Metagenome / Metatranscriptome Family F098840

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098840
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 63 residues
Representative Sequence FLAYVRKPATQGMPSFAAVPEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN
Number of Associated Samples 88
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 92.23 %
% of genes from short scaffolds (< 2000 bps) 85.44 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.670 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(7.767 % of family members)
Environment Ontology (ENVO) Unclassified
(47.573 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(68.932 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.21%    β-sheet: 0.00%    Coil/Unstructured: 62.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00857Isochorismatase 22.33
PF02687FtsX 15.53
PF00596Aldolase_II 2.91
PF01734Patatin 2.91
PF01741MscL 2.91
PF12850Metallophos_2 0.97
PF12704MacB_PCD 0.97
PF00497SBP_bac_3 0.97
PF01011PQQ 0.97
PF03795YCII 0.97
PF07676PD40 0.97
PF02775TPP_enzyme_C 0.97
PF00144Beta-lactamase 0.97
PF13147Obsolete Pfam Family 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 22.33
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 22.33
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 2.91
COG1970Large-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 2.91
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 2.91
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 2.91
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.97
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.97
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.97
COG2367Beta-lactamase class ADefense mechanisms [V] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.67 %
UnclassifiedrootN/A22.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_774958Not Available1002Open in IMG/M
3300000890|JGI11643J12802_10310766All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium514Open in IMG/M
3300000891|JGI10214J12806_10044700Not Available757Open in IMG/M
3300000891|JGI10214J12806_12218189All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300000953|JGI11615J12901_13602881All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300001991|JGI24743J22301_10075088All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium708Open in IMG/M
3300003997|Ga0055466_10038352All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300004114|Ga0062593_102144669Not Available625Open in IMG/M
3300004643|Ga0062591_102672397All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium527Open in IMG/M
3300004801|Ga0058860_12235866All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium501Open in IMG/M
3300005093|Ga0062594_101444017All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium701Open in IMG/M
3300005288|Ga0065714_10204281All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300005289|Ga0065704_10145527Not Available1475Open in IMG/M
3300005290|Ga0065712_10152847All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella1356Open in IMG/M
3300005290|Ga0065712_10563106All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium610Open in IMG/M
3300005293|Ga0065715_10381979All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300005294|Ga0065705_10117559All Organisms → cellular organisms → Bacteria3275Open in IMG/M
3300005295|Ga0065707_10090048All Organisms → cellular organisms → Bacteria4223Open in IMG/M
3300005330|Ga0070690_100356862All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300005336|Ga0070680_101531569All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium578Open in IMG/M
3300005339|Ga0070660_101019751All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium699Open in IMG/M
3300005341|Ga0070691_10791472All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium577Open in IMG/M
3300005353|Ga0070669_101198653Not Available656Open in IMG/M
3300005354|Ga0070675_100460491All Organisms → cellular organisms → Bacteria → Proteobacteria1141Open in IMG/M
3300005355|Ga0070671_101851578All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005364|Ga0070673_100137828All Organisms → cellular organisms → Bacteria2056Open in IMG/M
3300005455|Ga0070663_101105895All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300005455|Ga0070663_101743736All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium557Open in IMG/M
3300005457|Ga0070662_101342601Not Available616Open in IMG/M
3300005459|Ga0068867_100041685All Organisms → cellular organisms → Bacteria3355Open in IMG/M
3300005459|Ga0068867_101125274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium718Open in IMG/M
3300005544|Ga0070686_100024446All Organisms → cellular organisms → Bacteria3621Open in IMG/M
3300005544|Ga0070686_100816236Not Available753Open in IMG/M
3300005549|Ga0070704_101530724All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005577|Ga0068857_100669961All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300005615|Ga0070702_101554082All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium546Open in IMG/M
3300005618|Ga0068864_100423084Not Available1269Open in IMG/M
3300005719|Ga0068861_100782476All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300005719|Ga0068861_101724580All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300005840|Ga0068870_10777061All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300005840|Ga0068870_11266161All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium536Open in IMG/M
3300005844|Ga0068862_101015307All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300005844|Ga0068862_101244747Not Available744Open in IMG/M
3300005985|Ga0081539_10294685Not Available700Open in IMG/M
3300006846|Ga0075430_100493265All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300006969|Ga0075419_10843939All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300009094|Ga0111539_11234007All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300009100|Ga0075418_13163993All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium501Open in IMG/M
3300009147|Ga0114129_12351607All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300009176|Ga0105242_11711816All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium665Open in IMG/M
3300010041|Ga0126312_11074580Not Available590Open in IMG/M
3300010403|Ga0134123_10890167All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300010403|Ga0134123_13261004All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium523Open in IMG/M
3300011416|Ga0137422_1083807All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300011430|Ga0137423_1077739All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300011445|Ga0137427_10187468All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300011445|Ga0137427_10484452Not Available508Open in IMG/M
3300012212|Ga0150985_105929255All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300012484|Ga0157333_1002922All Organisms → cellular organisms → Bacteria → Acidobacteria929Open in IMG/M
3300012914|Ga0157297_10146351Not Available765Open in IMG/M
3300013306|Ga0163162_10864229All Organisms → cellular organisms → Bacteria → Acidobacteria1019Open in IMG/M
3300014326|Ga0157380_10471135All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1212Open in IMG/M
3300014326|Ga0157380_11727447All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300015371|Ga0132258_10016944All Organisms → cellular organisms → Bacteria15703Open in IMG/M
3300015373|Ga0132257_100390002All Organisms → cellular organisms → Bacteria1691Open in IMG/M
3300015373|Ga0132257_101369967Not Available899Open in IMG/M
3300018469|Ga0190270_10190038All Organisms → cellular organisms → Bacteria1722Open in IMG/M
3300018476|Ga0190274_13786820Not Available512Open in IMG/M
3300023066|Ga0247793_1098120All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium512Open in IMG/M
3300023071|Ga0247752_1042358All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium698Open in IMG/M
3300025160|Ga0209109_10055824All Organisms → cellular organisms → Bacteria → Acidobacteria2087Open in IMG/M
3300025903|Ga0207680_10337747All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300025907|Ga0207645_10214924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1267Open in IMG/M
3300025917|Ga0207660_10923063All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300025920|Ga0207649_10991458All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300025923|Ga0207681_11305200All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300025930|Ga0207701_11578273All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300025942|Ga0207689_10026264All Organisms → cellular organisms → Bacteria4876Open in IMG/M
3300025960|Ga0207651_10044459Not Available2972Open in IMG/M
3300025960|Ga0207651_11236616All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300025972|Ga0207668_11953430All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium529Open in IMG/M
3300026067|Ga0207678_11723703All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300026075|Ga0207708_10409727All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300026118|Ga0207675_101199256All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300026121|Ga0207683_10018975All Organisms → cellular organisms → Bacteria5868Open in IMG/M
3300027395|Ga0209996_1074110Not Available531Open in IMG/M
3300027909|Ga0209382_10865013All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300028380|Ga0268265_10822964All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300031547|Ga0310887_10428380Not Available784Open in IMG/M
3300031908|Ga0310900_10355921All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300031908|Ga0310900_10946622All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium705Open in IMG/M
3300031913|Ga0310891_10154199Not Available747Open in IMG/M
3300032075|Ga0310890_10288144All Organisms → cellular organisms → Bacteria → Proteobacteria1175Open in IMG/M
3300032157|Ga0315912_10365270All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300032179|Ga0310889_10277608All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300033004|Ga0335084_10205022All Organisms → cellular organisms → Bacteria2047Open in IMG/M
3300033412|Ga0310810_11206089All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium612Open in IMG/M
3300034147|Ga0364925_0100705All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300034672|Ga0314797_136095All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium534Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.85%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere3.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.91%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.94%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.97%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.97%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.97%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011416Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2EnvironmentalOpen in IMG/M
3300011430Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012484Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027395Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034672Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0149.000056502162886013Switchgrass RhizosphereAYVRKPATQGMPSFAAVSEQQLRDVYTYIRSIPQAAPTPDSVPLIKGILDRRTKAN
JGI11643J12802_1031076613300000890SoilYDGQTGSPRLVPMARSEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRTKAN*
JGI10214J12806_1004470033300000891SoilPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
JGI10214J12806_1221818923300000891SoilKPATQGMPSFAAISEQQLRDVYAYIRSIPQAAPAPESVPLIKGILDRRTKAN*
JGI11615J12901_1360288123300000953SoilMIRTQEQFLTYVRKPATAQMPKFVDPPEKDLVDVYSYIRSIPVAAPPADSIPLLKGIIDKRQQVK*
JGI24743J22301_1007508813300001991Corn, Switchgrass And Miscanthus RhizosphereVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTIPLIKKVLDRRAKAN*
Ga0055466_1003835213300003997Natural And Restored WetlandsFLAYVRKPATQGMPSFAAVPEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0062593_10214466923300004114SoilVPMARSEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRTKAN*
Ga0062591_10267239723300004643SoilEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRTKAN*
Ga0058860_1223586623300004801Host-AssociatedSPRLVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPILKGVLDRRAKAN*
Ga0062594_10144401713300005093SoilMTRDEDVFLAYVRKPATQGMPSFAAQPEADLRDVYAYIRSIPQAAPAADSVPVIKGILDRRSKTN*
Ga0065714_1020428123300005288Miscanthus RhizosphereDGQTGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGIIDRRTKAN*
Ga0065704_1014552733300005289Switchgrass RhizosphereLAYVRKPATQGMPSFAAVSEQQLRDVYTYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0065712_1015284713300005290Miscanthus RhizosphereGQTGSPRLVPMARSEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRTKAN*
Ga0065712_1056310623300005290Miscanthus RhizosphereLVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPILKGVLDRRAKAN*
Ga0065715_1038197923300005293Miscanthus RhizosphereVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGIIDRRTKAN*
Ga0065705_1011755913300005294Switchgrass RhizosphereLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYTYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0065707_1009004813300005295Switchgrass RhizosphereARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYTYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0070690_10035686213300005330Switchgrass RhizosphereTGSPRLVPMTRSEDIFLAYVRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAK*
Ga0070680_10153156913300005336Corn RhizosphereFDGQTGSPRLVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSIPLLKGVLDRRAKAN*
Ga0070660_10101975133300005339Corn RhizosphereSPRLVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLIKGILDRRGKAN*
Ga0070691_1079147213300005341Corn, Switchgrass And Miscanthus RhizosphereAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAALNADTVPLIKKVLDRRAKAN*
Ga0070669_10119865323300005353Switchgrass RhizosphereKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN*
Ga0070675_10046049113300005354Miscanthus RhizosphereGQTGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0070671_10185157823300005355Switchgrass RhizosphereTGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAQ*
Ga0070673_10013782813300005364Switchgrass RhizosphereGYDGQTGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAK*
Ga0070663_10110589513300005455Corn RhizosphereYVRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0070663_10174373613300005455Corn RhizospherePRLVPMSRAEDVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKKVLDRRAKAN*
Ga0070662_10134260113300005457Corn RhizospherePATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPILKGVLDRRAKAN*
Ga0068867_10004168513300005459Miscanthus RhizosphereGSPRLVPMARAEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRGKAN*
Ga0068867_10112527423300005459Miscanthus RhizosphereHGYDGQTGSPRLVPMGRAQDAFVAYVRKPSGRGMPSFAATPERDLVDVYAYIRSIAPAAPSVDSLPLLKAIAERRAKAN*
Ga0070686_10002444653300005544Switchgrass RhizosphereLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKKVLDRRAKAN*
Ga0070686_10081623633300005544Switchgrass RhizosphereRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSIPLLKGVLDRRAKAN*
Ga0070704_10153072413300005549Corn, Switchgrass And Miscanthus RhizosphereMARSEDIFLAYLRKPATQGMPSFAAVSDQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRAKAN*
Ga0068857_10066996133300005577Corn RhizosphereLAYVRKPATQGMPSFAAQPEADLRDVYAYIRSIPQAAPAADSVPVIKGILDRRSKTN*
Ga0068857_10115554223300005577Corn RhizosphereGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRTKAN*
Ga0070702_10155408223300005615Corn, Switchgrass And Miscanthus RhizosphereDVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTIPLIKKVLDRRAKAN
Ga0068864_10042308413300005618Switchgrass RhizospherePATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN*
Ga0068861_10078247613300005719Switchgrass RhizosphereDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPESVPLIKGILDRRTKAN
Ga0068861_10172458023300005719Switchgrass RhizosphereFLAYVRKPATQGMPSFAAVSEQQLRDAYAHIRSIPQAAPAPDSVPLIKGILDRRTKAK*
Ga0068870_1077706133300005840Miscanthus RhizosphereTGSPRLVPMARAEDIFLAYVRKPATQGMPSMAAVPEQQLRDVYAYIRSIPQAAPAADSVPLIKSILDRRNKTN*
Ga0068870_1126616123300005840Miscanthus RhizosphereTGSPRLVPMARSEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGILDRRTKAN*
Ga0068862_10101530713300005844Switchgrass RhizosphereGYDGQTGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGIIDRRTKAN*
Ga0068862_10124474733300005844Switchgrass RhizospherePATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLIKGILDRRGKAN*
Ga0081539_1029468523300005985Tabebuia Heterophylla RhizosphereEDAFIAYVRKPATEGMPKFSAVPQRDLTDVYAYIRSIPQAAPPAASIPFLKDVLDRRGKN
Ga0075430_10049326523300006846Populus RhizosphereMARAEDVFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSLPLIKGILDRRSSAN*
Ga0075434_10038591423300006871Populus RhizospherePQMPKFVDPPEKDLVDVYAYIRSIPVAAPTPDSIPLLKGIIERRQQVK*
Ga0079217_1165711613300006876Agricultural SoilVGMPSFRDAAERDLVDVYAYIRSIPQAAPAADSIPLLKSIADRRAAGK*
Ga0075419_1084393913300006969Populus RhizosphereARPGQTGSPRLVPMARTEDVFLAYVRKPATQGMPSFAAVPEQQLRDAYAYIRSIPQAAPAPDGVPLIKGILDRRTKAN*
Ga0111539_1123400723300009094Populus RhizosphereRLVPMARSEDIFLAYVRKPATQGMPSFAAISEQQLRDVYAYIRSIPQAAPLPESVPLIKGILDRRTKAN*
Ga0075418_1316399313300009100Populus RhizospherePRLVPMARAEDVFLAYVRKPATQGMPSFAAIPEADLRDVYAYVRSIPQAAPNADSVPLIKGILDRRAKAN*
Ga0114129_1235160713300009147Populus RhizosphereVRKPATPQMPKFVDPPEKDLVDVYSYIRSIPVAAPSADSIPLLKGIIDKRQQVK*
Ga0105242_1171181623300009176Miscanthus RhizosphereVPMVRAEDVFLAYVRKPATQGMPSFMAIPETDLRDVYAYIRSIPQAAPNADTVPLIKGILDRRTKAN*
Ga0126312_1107458013300010041Serpentine SoilIFLVYVRKPATAGMPSFAAVPEQELRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0134123_1089016713300010403Terrestrial SoilTQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0134123_1326100413300010403Terrestrial SoilFLAYVRKPRTQGMPSFADAQERDLVDVYAYIRSIPQAAPPVESLPILKGILDRRSKAN*
Ga0137422_108380713300011416SoilDGQTGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0137423_107773913300011430SoilPMARAEDIFLAYVRKPATPGMPSFVAAPEADLKDVYAYIRSIPQAAPAAESVPLIKGILDRRTKAN*
Ga0137427_1018746823300011445SoilGSPRLVPMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN*
Ga0137427_1048445213300011445SoilVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN*
Ga0150985_10592925513300012212Avena Fatua RhizosphereGYDGQTGSPRLAPMGRQQDAFVAYVRKPSGRGMPSFAATAERDLVDVYAYIRSITPAAPAVDSLPLLKAIAERRAKAN*
Ga0157333_100292213300012484SoilPMSRAEDVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKKVLDRRAKAN*
Ga0157297_1014635113300012914SoilATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN*
Ga0163162_1086422933300013306Switchgrass RhizosphereVPMSRAEDVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTIPLIKKVLDRRAKAN*
Ga0157380_1047113533300014326Switchgrass RhizosphereDGQTGSPRLVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLIKGILDRRGKAN*
Ga0157380_1172744723300014326Switchgrass RhizospherePATQGMPSFADAQERDLLDVYAYIRSIPQAAPPVDSLPILKGILDRRSRAN*
Ga0132258_1001694413300015371Arabidopsis RhizosphereTQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGIIDRRTKAN*
Ga0132257_10039000213300015373Arabidopsis RhizospherePRLVPMTRTQEVFLAYVRKPATPQMPKFADPPEKDLVDVYAYIRSIPVAAPPADSIPLLKGIIDRRQKTN*
Ga0132257_10136996713300015373Arabidopsis RhizosphereQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN*
Ga0190270_1019003823300018469SoilSPRLVPMARAEDIFLAYVRKPATAGMPSFAATPEQELRDVYAYIRSIPQAAPSADSVPLIKGILDRRTKAN
Ga0190274_1378682013300018476SoilPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN
Ga0247793_109812023300023066SoilARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLIKGILDRRGKAN
Ga0247752_104235823300023071SoilGYDGQTGSPRLVPMTRSEDIFLAYVRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILERRTKAN
Ga0209109_1005582413300025160SoilSFLAYVRKPATPGMPSFAAIAEQDLRDVYAHIRSIPQAAPAPDSIPLLKGILDKRTKAN
Ga0209341_1094661913300025325SoilSPRLVPAARPEEAFVAYVRTPPAPGMPSFAAAPERDLKDVYAYVRSIPVAAPPVESIPILKAIRDRRMQAP
Ga0207680_1033774733300025903Switchgrass RhizosphereDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSIPLLKGVLDRRAKAN
Ga0207645_1021492433300025907Miscanthus RhizosphereVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSIPLLKGVLDRRAKAN
Ga0207660_1092306313300025917Corn RhizosphereFDAQTGTPRLVPMARTQDAFITYVRKPATPGMPKFAETPEKDLADVYAYIRSIPQAAPSPESVPLIKGILDRRTKAN
Ga0207649_1099145823300025920Corn RhizosphereLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPSPDSVPLIKGIIDRRTKAN
Ga0207681_1130520013300025923Switchgrass RhizosphereDAQTGSPRLVPMMRPEAAFLAYVRKPATQGMPSFADAQERDLLDVYAYIRSIPQAAPPVDSLPILKGILDRRSRAN
Ga0207701_1157827323300025930Corn, Switchgrass And Miscanthus RhizosphereKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN
Ga0207689_1002626413300025942Miscanthus RhizosphereDGQTGSPRLVPMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLIKGILDRRGKAN
Ga0207651_1004445913300025960Switchgrass RhizosphereVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKKVLDRRAKAN
Ga0207651_1123661623300025960Switchgrass RhizosphereATQGMPSFAAISEQQLRDVYAYIRSIPQAAPAPESVPLIKGILDRRTKAN
Ga0207668_1195343013300025972Switchgrass RhizosphereMARAEDVFLAYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPL
Ga0207678_1172370313300026067Corn RhizosphereYVRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN
Ga0207708_1040972713300026075Corn, Switchgrass And Miscanthus RhizosphereVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSIPLLKGVLDRRAKAN
Ga0207675_10119925623300026118Switchgrass RhizosphereYVRKPATQGMPSFAAVSEQQLRDAYAHIRSIPQAAPAPDSVPLIKGILDRRTKAK
Ga0207683_1001897523300026121Miscanthus RhizosphereMSRAEDVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKKVLDRRAKAN
Ga0209996_107411023300027395Arabidopsis Thaliana RhizospherePATQGMPSFVAQPEADLRDVYAYIRSIPQGAPNADTVPLIKKVLDRRAKAN
Ga0209382_1086501313300027909Populus RhizosphereEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKA
Ga0268265_1082296413300028380Switchgrass RhizosphereFLAYVRKPATQGMPSFATVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAK
Ga0310887_1042838033300031547SoilTQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLIKGILDRRGKAN
Ga0310900_1035592133300031908SoilRKPATQGMPSFAAVSEQQLRDAYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN
Ga0310900_1094662233300031908SoilYVRKPATQGMPSFVAIPEADLRDVYAYIRSIPQAAPNADSVPLLKGVLDRRAKAN
Ga0310891_1015419913300031913SoilTGSPRLVPMARSQEVFLAYVRKPATQGMPSFRDAAERDLIDVYAYIRSIPTAAPAADSIPLLKSIVDRRTAAK
Ga0310890_1028814413300032075SoilVRKPATQGMPSFRDAAERDLIDVYAYIRSIPTAAPAADSIPLLKSIVDRRAAAK
Ga0315912_1036527033300032157SoilEDVFLAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKGILDRRAKA
Ga0310889_1027760813300032179SoilPRLVPMARSEDIFLAYVRKPATQGMPSFAAISEQQLRDVYAYIRSIPQAAPSPDSVPLIKGIIDRRTKAN
Ga0335084_1020502233300033004SoilGSPRLVPMARPQDGFLAFVRKPSGRGMPSFVATPERDLADVYAYIRSIPPAAPPVDSLPLLKGIIERRQKAN
Ga0310810_1120608933300033412SoilAYVRKPATQGMPSFVAQPEADLRDVYAYIRSIPQAAPNADTVPLIKKVLDRRAKAN
Ga0364925_0100705_3_2003300034147SedimentMARAEDIFLAYVRKPATPGMPSFVAAPEADLKDVYAYIRSIPQAAPAAESVPLIKGILDRRTKAN
Ga0314797_136095_315_5123300034672SoilMARSEDIFLAYVRKPATQGMPSFAAVSEQQLRDVYAYIRSIPQAAPAPDSVPLIKGILDRRTKAN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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