NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098809

Metagenome / Metatranscriptome Family F098809

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098809
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 68 residues
Representative Sequence DNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYK
Number of Associated Samples 93
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 71.84 %
% of genes from short scaffolds (< 2000 bps) 58.25 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (73.786 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(33.010 % of family members)
Environment Ontology (ENVO) Unclassified
(59.223 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(98.058 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.48%    β-sheet: 0.00%    Coil/Unstructured: 56.52%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF07486Hydrolase_2 3.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 3.88


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.79 %
All OrganismsrootAll Organisms26.21 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006868|Ga0075481_10135482Not Available902Open in IMG/M
3300007554|Ga0102820_1031613All Organisms → Viruses → Predicted Viral1297Open in IMG/M
3300007954|Ga0105739_1130389Not Available589Open in IMG/M
3300007962|Ga0102907_1190294Not Available525Open in IMG/M
3300009049|Ga0102911_1202114Not Available560Open in IMG/M
3300009059|Ga0102830_1029898All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1686Open in IMG/M
3300009071|Ga0115566_10207721All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium1192Open in IMG/M
3300009077|Ga0115552_1022573All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon3065Open in IMG/M
3300009437|Ga0115556_1114502All Organisms → Viruses → Predicted Viral1019Open in IMG/M
3300009438|Ga0115559_1201322Not Available719Open in IMG/M
3300009496|Ga0115570_10278864Not Available730Open in IMG/M
3300009505|Ga0115564_10251497Not Available900Open in IMG/M
3300009507|Ga0115572_10141319All Organisms → Viruses → Predicted Viral1417Open in IMG/M
3300009608|Ga0115100_11114346Not Available621Open in IMG/M
3300014973|Ga0134293_1030630Not Available650Open in IMG/M
3300017709|Ga0181387_1000561Not Available8291Open in IMG/M
3300017709|Ga0181387_1034163Not Available999Open in IMG/M
3300017710|Ga0181403_1007102All Organisms → Viruses → Predicted Viral2433Open in IMG/M
3300017720|Ga0181383_1001089Not Available7931Open in IMG/M
3300017724|Ga0181388_1051449Not Available994Open in IMG/M
3300017730|Ga0181417_1136327Not Available593Open in IMG/M
3300017732|Ga0181415_1042030All Organisms → Viruses → Predicted Viral1046Open in IMG/M
3300017733|Ga0181426_1004205All Organisms → Viruses → Predicted Viral2808Open in IMG/M
3300017734|Ga0187222_1025284All Organisms → Viruses → Predicted Viral1429Open in IMG/M
3300017735|Ga0181431_1003154All Organisms → Viruses → Predicted Viral4376Open in IMG/M
3300017738|Ga0181428_1064570Not Available854Open in IMG/M
3300017741|Ga0181421_1204960Not Available504Open in IMG/M
3300017742|Ga0181399_1035997All Organisms → Viruses → Predicted Viral1327Open in IMG/M
3300017742|Ga0181399_1146856Not Available568Open in IMG/M
3300017745|Ga0181427_1173171Not Available520Open in IMG/M
3300017751|Ga0187219_1020997All Organisms → Viruses → Predicted Viral2385Open in IMG/M
3300017755|Ga0181411_1033978All Organisms → Viruses → Predicted Viral1614Open in IMG/M
3300017756|Ga0181382_1064795All Organisms → Viruses → Predicted Viral1030Open in IMG/M
3300017760|Ga0181408_1034567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED1311377Open in IMG/M
3300017762|Ga0181422_1181776Not Available639Open in IMG/M
3300017768|Ga0187220_1144130Not Available720Open in IMG/M
3300017782|Ga0181380_1246606Not Available593Open in IMG/M
3300017786|Ga0181424_10255966Not Available732Open in IMG/M
3300020440|Ga0211518_10025235All Organisms → Viruses → Predicted Viral3686Open in IMG/M
3300021335|Ga0213867_1230234Not Available605Open in IMG/M
3300021371|Ga0213863_10165605Not Available996Open in IMG/M
3300021378|Ga0213861_10323049Not Available784Open in IMG/M
3300021960|Ga0222715_10453658Not Available689Open in IMG/M
3300024180|Ga0228668_1103694Not Available502Open in IMG/M
3300024188|Ga0228602_1055478Not Available640Open in IMG/M
3300024231|Ga0233399_1070160Not Available865Open in IMG/M
3300024237|Ga0228653_1011572All Organisms → cellular organisms → Bacteria → Proteobacteria2134Open in IMG/M
3300024244|Ga0228678_1022709All Organisms → Viruses → Predicted Viral1158Open in IMG/M
3300024247|Ga0228675_1004531All Organisms → cellular organisms → Bacteria → Proteobacteria3987Open in IMG/M
3300024281|Ga0228610_1059778Not Available548Open in IMG/M
3300024297|Ga0228658_1055134All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1009Open in IMG/M
3300024332|Ga0228659_1143453Not Available503Open in IMG/M
3300024348|Ga0244776_10640672Not Available664Open in IMG/M
3300024348|Ga0244776_10834532Not Available553Open in IMG/M
3300024428|Ga0233396_1111598Not Available643Open in IMG/M
3300025626|Ga0209716_1018486All Organisms → Viruses → Predicted Viral2877Open in IMG/M
3300025674|Ga0208162_1200626Not Available507Open in IMG/M
3300025685|Ga0209095_1144903Not Available698Open in IMG/M
3300025701|Ga0209771_1100928Not Available957Open in IMG/M
3300025704|Ga0209602_1165738Not Available692Open in IMG/M
3300025810|Ga0208543_1011705All Organisms → Viruses → Predicted Viral2238Open in IMG/M
3300025876|Ga0209223_10251085Not Available831Open in IMG/M
3300025886|Ga0209632_10471752Not Available580Open in IMG/M
3300025892|Ga0209630_10293964Not Available742Open in IMG/M
3300026491|Ga0228641_1059919Not Available899Open in IMG/M
3300026517|Ga0228607_1078948Not Available832Open in IMG/M
3300027188|Ga0208921_1022627Not Available959Open in IMG/M
3300027233|Ga0208678_1080426Not Available636Open in IMG/M
3300027833|Ga0209092_10093668All Organisms → Viruses → Predicted Viral1789Open in IMG/M
3300028126|Ga0228648_1006065All Organisms → cellular organisms → Bacteria → Proteobacteria2074Open in IMG/M
3300028128|Ga0228645_1069287Not Available786Open in IMG/M
3300028131|Ga0228642_1002265All Organisms → cellular organisms → Bacteria → Proteobacteria6568Open in IMG/M
3300028133|Ga0228609_1042300All Organisms → Viruses → Predicted Viral1264Open in IMG/M
3300028135|Ga0228606_1062587Not Available983Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater33.01%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater24.27%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine11.65%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine10.68%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.88%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.91%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.94%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.97%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.97%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.97%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.97%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.97%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine0.97%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.97%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876005Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-3LG-ETM-15mEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007665Estuarine microbial communities from the Columbia River estuary - metaG 1557A-3EnvironmentalOpen in IMG/M
3300007954Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2umEnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009059Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009608Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300014973Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0116 : 2 days incubationEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300024180Seawater microbial communities from Monterey Bay, California, United States - 82DEnvironmentalOpen in IMG/M
3300024188Seawater microbial communities from Monterey Bay, California, United States - 2DEnvironmentalOpen in IMG/M
3300024231Seawater microbial communities from Monterey Bay, California, United States - 43DEnvironmentalOpen in IMG/M
3300024237Seawater microbial communities from Monterey Bay, California, United States - 65DEnvironmentalOpen in IMG/M
3300024244Seawater microbial communities from Monterey Bay, California, United States - 125D_rEnvironmentalOpen in IMG/M
3300024247Seawater microbial communities from Monterey Bay, California, United States - 36D_rEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024281Seawater microbial communities from Monterey Bay, California, United States - 11DEnvironmentalOpen in IMG/M
3300024297Seawater microbial communities from Monterey Bay, California, United States - 71DEnvironmentalOpen in IMG/M
3300024321Seawater microbial communities from Monterey Bay, California, United States - 31DEnvironmentalOpen in IMG/M
3300024332Seawater microbial communities from Monterey Bay, California, United States - 73DEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024428Seawater microbial communities from Monterey Bay, California, United States - 32DEnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025685Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026483Seawater microbial communities from Monterey Bay, California, United States - 23DEnvironmentalOpen in IMG/M
3300026491Seawater microbial communities from Monterey Bay, California, United States - 52DEnvironmentalOpen in IMG/M
3300026517Seawater microbial communities from Monterey Bay, California, United States - 8DEnvironmentalOpen in IMG/M
3300027188Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)EnvironmentalOpen in IMG/M
3300027233Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028126Seawater microbial communities from Monterey Bay, California, United States - 60DEnvironmentalOpen in IMG/M
3300028128Seawater microbial communities from Monterey Bay, California, United States - 57DEnvironmentalOpen in IMG/M
3300028131Seawater microbial communities from Monterey Bay, California, United States - 53DEnvironmentalOpen in IMG/M
3300028133Seawater microbial communities from Monterey Bay, California, United States - 10DEnvironmentalOpen in IMG/M
3300028135Seawater microbial communities from Monterey Bay, California, United States - 7DEnvironmentalOpen in IMG/M
3300028396Seawater microbial communities from Monterey Bay, California, United States - 55DEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_03750812236876005Marine EstuarineLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGADANMRM
Ga0075478_1026908213300006026AqueousTAINYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDADMRMYKS*
Ga0075481_1013548223300006868AqueousAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDADMRMYKS*
Ga0102820_103161313300007554EstuarineEEDCDNCYNWVNATEELCTQTNKVLDNYFTHKDETLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM*
Ga0102908_111217823300007665EstuarineAINYRYDDDCINEGISEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM*
Ga0105739_113038913300007954Estuary WaterEDGGANVYDWVAATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS*
Ga0102907_119029413300007962EstuarineTEELCGRTQCVLDNYFTHKDETLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM*
Ga0102811_135904723300009024EstuarineATAIDNRYDDDCINEGIAEHFFDYCKKHNILDFYYKQVDAHDYDGVDLDMRM*
Ga0102957_136093023300009027Pond WaterATAFETAINYRYDDDCINEGISEHFFDYCKKHNILEFYFKQEDAHDYDGEDANMRMYKS*
Ga0102911_120211413300009049EstuarineKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRM*
Ga0102826_106083013300009054EstuarineLKDKTLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM*
Ga0102830_102989843300009059EstuarineNYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM*
Ga0115566_1020772143300009071Pelagic MarineDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQNDAHDYDGVDACMRM*
Ga0115552_102257383300009077Pelagic MarineLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYKS*
Ga0115546_131880023300009435Pelagic MarineIDYRYDDDCINEGISEHFYDYCKKHNILDFYFKQADAHDYDGEDANMRMYKS*
Ga0115008_1082222013300009436MarineTYATAIATAINYRYDDDCINDGIAEMFYDYCKQHNILEFYFKDKNAHNYA*
Ga0115556_111450213300009437Pelagic MarineDEEDCDNCYNWVNATEELCMRTQCVLDNYFTHKDATLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYK*
Ga0115559_120132213300009438Pelagic MarineATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDACMRMYK*
Ga0115570_1017362333300009496Pelagic MarineATAFETAIEYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDACMRMYK*
Ga0115570_1027886413300009496Pelagic MarineTAFTHAIDYRYDDDCINEGIGEMFYDYCKQHNMLDLYFKQADAHDYGGADAHMRM*
Ga0115564_1025149713300009505Pelagic MarineCVLDNYFTHKDETLATAFKTAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYK*
Ga0115572_1014131933300009507Pelagic MarineDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYK*
Ga0115100_1111434613300009608MarineWVAATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKENGAYDYDGEDANMRMYKS*
Ga0114999_1093968123300009786MarineTQTNILLNNYFNKDNKTYATAIATAIKYRYYDDCINDGIAEMFYDYCKQHNILEFYFKDKNAHNYA*
Ga0129351_113736313300010300Freshwater To Marine Saline GradientTAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRMYKS*
Ga0134293_103063013300014973MarineTAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQNDAHDYDGEDANMRMYKS*
Ga0181387_100056113300017709SeawaterDELCAQTTKVLDNYFTKNDKTVATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0181387_103416333300017709SeawaterATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0181403_100710263300017710SeawaterAINYRYDDDCINEGVSEHFYDYCKQHNCMELYYKQEDAHDYDGEDACMRM
Ga0181383_100108913300017720SeawaterQTTKVLDNYFTKNDKTVATAFETAINYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0181383_112476523300017720SeawaterIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0181388_105144923300017724SeawaterELCTQTNKVLDNYFTLNDKTVATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0181417_113632713300017730SeawaterLCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0181415_104203033300017732SeawaterVAATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0181426_100420513300017733SeawaterIAATDELCAQTTKVLDNYFTKNDKTVATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0187222_102528443300017734SeawaterLDNYFTKNDKTVATAFETAINYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0181431_1003154123300017735SeawaterYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0181428_106457033300017738SeawaterATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0181421_117533323300017741SeawaterIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0181421_120496013300017741SeawaterNDKTVATAFETAINYRYDDDCINEGISEHFFDYCKKHNILDFYYKQKDAHDYDGEDACMR
Ga0181399_103599713300017742SeawaterSDEDFAYDEDGGANIYDWVAATEELCMQTQCVLDNYFTHKDETLKTAFETALGYRYDDDCINEGIREHFFDYCKKHNILDFYFKENGAYDYDGEDANMRMYKS
Ga0181399_114685623300017742SeawaterKDKTAATAFAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYWKQEDAHDYDGEDAALR
Ga0181397_106968023300017744SeawaterVATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKENGAYDYDGEDANMRMYKS
Ga0181427_117317123300017745SeawaterFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0181405_111853533300017750SeawaterAINYRYDDDCINEGVSEHFYDYCKQHNCMELYWKQEDAHDYDGEDAALRM
Ga0187219_102099713300017751SeawaterVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHGILDFYFKQEDAHDYDGADAHMRM
Ga0181411_103397813300017755SeawaterTTKVLDSYYTKKDATAATAFAHAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0181382_101091313300017756SeawaterNAATAFAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYYKQEDAHDYDGEDACMRM
Ga0181382_106479513300017756SeawaterQCVLDNYFTHKDETLKTAFETALGYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0181408_103456743300017760SeawaterAATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0181422_118177623300017762SeawaterAQVLDNYFTLKDKTLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0181410_108254313300017763SeawaterRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRMYKS
Ga0187220_101107813300017768SeawaterTAATAFAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYWKQEDAHDYDGEDAALRM
Ga0187220_114413013300017768SeawaterDWVAATEELCMQTQCVLDNYFTHKDETLKTAFETALGYRYDDDCINEGIREHFFDYCKKHNILDFYFKENGAYDYDGEDANMRMYKS
Ga0181425_120066423300017771SeawaterFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0181394_102486553300017776SeawaterTSAATAFAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYYKQEDAHDYDGEDACMRM
Ga0181423_104007253300017781SeawaterAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYWKQEDAHDYDGEDAALRM
Ga0181380_124660623300017782SeawaterDNCYNWVNATEELCTQTNTVLDNYFTLNDKTVATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0181379_124559033300017783SeawaterFAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYWKQEDAHDYDGEDAALRM
Ga0181424_1025596613300017786SeawaterRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0211518_1002523513300020440MarineAIDYRYDDDCINEGISEHFFDYCKKHGILDFYFKQADAHDYDGEDANMRMYKS
Ga0213867_123023413300021335SeawaterYFTKNDKTVATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRMYKS
Ga0213863_1016560533300021371SeawaterDWIAATEELCVQTTKVLDNYFTKNDKTVATAFETAIDYRYDDDCINEGISEHFYDYCKKHNILDFYFKQKDAHDYDGEDANMRMYKS
Ga0213861_1032304913300021378SeawaterDNCYNWVNATEELCTQMNKVLDNYFDKNDKTVATAFKTAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDADMRMYKS
Ga0222715_1045365823300021960Estuarine WaterEDGGANVYDWVAATEELCVQTTKVLDNYFTQNDKTLVTAFTTALGYRYDDDCINEGIREHFFDYCKKHNILDFYFKENGAYDYDGEDANMRMYKS
Ga0228668_110369423300024180SeawaterTKKDKTLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228602_105547813300024188SeawaterINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0233399_107016013300024231SeawaterNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0228653_101157263300024237SeawaterNKVLDNYFTKKDKTLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228678_102270913300024244SeawaterIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0228678_106376533300024244SeawaterTAINYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228675_100453113300024247SeawaterISATDELCVQTNKVLENYFTLNDKTVATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
(restricted) Ga0233438_1009980343300024255SeawaterFAHAINYRYDDDCINEGVSEHFYDYCKQHNCMELYYKQEDAHDYDGEDAALRM
Ga0228610_105977823300024281SeawaterFAYDEEDGENVYDWIAATDELCAQTTKVLDNYFTKNDKTVATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0228658_105513433300024297SeawaterNYFTKNDKTVATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0228626_108172513300024321SeawaterTAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228659_105740113300024332SeawaterKDKTLATAFETAINYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMR
Ga0228659_114345313300024332SeawaterTAQILDNYFTLKDKTLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0244776_1064067213300024348EstuarineENVYDWISATDELCTQTAQVLDNYFTLKDKTLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0244776_1083453223300024348EstuarineQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYKS
Ga0233396_111159813300024428SeawaterYDWIAATDELCAQTTKVLDNYFTKNDKTVATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQADAHDYDGEDANMRM
Ga0209716_101848673300025626Pelagic MarineTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYKS
Ga0208162_120062623300025674AqueousATEELCTQMNKVLDNYFDKNDKTVATAFKTAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDADMRMYKS
Ga0209095_114490323300025685Pelagic MarineDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYK
Ga0209771_110092833300025701MarineDELCTQTAQVLDNYFTLKDKTLATAFETAINYRYDDDCINEGISEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0209602_116573813300025704Pelagic MarineTYDWVSATEELCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFYDYCKKHNILDFYFKQADAHDYDGEDANMRMYKS
Ga0208543_101170553300025810AqueousNYFDKNDKTVATAFKTAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDADMRMYKS
Ga0209223_1025108513300025876Pelagic MarineMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQADAHDYDGEDANMRMYK
Ga0209632_1047175213300025886Pelagic MarineHKDETLATAFETAIDYRYDDDCINEGISEHFYDYCKKHNILDFYFKQADAHDYDGEDANMRMYKS
Ga0209630_1029396413300025892Pelagic MarineKTVATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQADAHDYDGEDADMRMYKS
Ga0228620_109953623300026483SeawaterTAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0228641_105991923300026491SeawaterHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0228607_107894813300026517SeawaterELCGRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0208921_102262713300027188EstuarineTQTAQVLDNYFTLKDKTLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0208678_108042613300027233EstuarineYDWISATDELCTQTAQVLDNYFTLKDKTLATAFETAINYRYDDDCINEGIAEHFFDYCKKHNILEFYFKQTDAHDYDGADADLRM
Ga0209092_1009366843300027833MarineLCMRTQCVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDADMRMYKS
Ga0209402_1067885713300027847MarineTQTNILLNNYFNKDNKTYATAIATAIKYRYYDDCINDGIAEMFYDYCKQHNILEFYFKDKNAHNYA
Ga0228648_100606513300028126SeawaterIMATDELCTQTNLVLENYFTKKDKTLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228645_106928713300028128SeawaterVLDNYFTHKDETLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILEFYFKQKDAHDYDGEDANMRMYKS
Ga0228642_1002265183300028131SeawaterQTNKVLDNYFTKKDKTLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228609_104230013300028133SeawaterKKDKTLATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228606_106258733300028135SeawaterLCTQTNLVLENYFTKKDKTLATAFETAINYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM
Ga0228643_106591713300028396SeawaterATAFETAIDYRYDDDCINEGISEHFFDYCKKHNILDFYFKQKDAHDYDGEDANMRM


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