NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098807

Metagenome / Metatranscriptome Family F098807

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098807
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 92 residues
Representative Sequence TGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLDVAQSVSDAAGGGEAAESGAIEKVRSALA
Number of Associated Samples 93
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.98 %
% of genes near scaffold ends (potentially truncated) 96.12 %
% of genes from short scaffolds (< 2000 bps) 87.38 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.146 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(31.068 % of family members)
Environment Ontology (ENVO) Unclassified
(42.718 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.398 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 59.13%    β-sheet: 0.00%    Coil/Unstructured: 40.87%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF03631Virul_fac_BrkB 6.80
PF01636APH 6.80
PF04237YjbR 5.83
PF09948DUF2182 4.85
PF13602ADH_zinc_N_2 2.91
PF14518Haem_oxygenas_2 2.91
PF06772LtrA 2.91
PF13650Asp_protease_2 1.94
PF00127Copper-bind 1.94
PF02416TatA_B_E 0.97
PF05231MASE1 0.97
PF08317Spc7 0.97
PF02518HATPase_c 0.97
PF12760Zn_Tnp_IS1595 0.97
PF00480ROK 0.97
PF04828GFA 0.97
PF05014Nuc_deoxyrib_tr 0.97
PF05694SBP56 0.97
PF00211Guanylate_cyc 0.97
PF09335SNARE_assoc 0.97
PF05496RuvB_N 0.97
PF05199GMC_oxred_C 0.97
PF00902TatC 0.97
PF00107ADH_zinc_N 0.97
PF13561adh_short_C2 0.97
PF06441EHN 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 6.80
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 5.83
COG4292Low temperature requirement protein LtrA (function unknown)Function unknown [S] 2.91
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.94
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.97
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.97
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.97
COG3613Nucleoside 2-deoxyribosyltransferaseNucleotide transport and metabolism [F] 0.97
COG3447Integral membrane sensor domain MASE1Signal transduction mechanisms [T] 0.97
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.97
COG2255Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvBReplication, recombination and repair [L] 0.97
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.97
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 0.97
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.97
COG0805Twin-arginine protein secretion pathway component TatCIntracellular trafficking, secretion, and vesicular transport [U] 0.97
COG0642Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.97
COG05962-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase foldCoenzyme transport and metabolism [H] 0.97
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.15 %
UnclassifiedrootN/A4.85 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_104564051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2261Open in IMG/M
3300000956|JGI10216J12902_109141115All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300001305|C688J14111_10149255All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300001538|A10PFW1_10723014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria589Open in IMG/M
3300002028|A17_1191755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria614Open in IMG/M
3300004114|Ga0062593_102219895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria615Open in IMG/M
3300004479|Ga0062595_100678642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium822Open in IMG/M
3300004479|Ga0062595_101301168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium654Open in IMG/M
3300005336|Ga0070680_101282880All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005336|Ga0070680_101962942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → Ornithinimicrobium pekingense507Open in IMG/M
3300005339|Ga0070660_100020481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4861Open in IMG/M
3300005343|Ga0070687_100066421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1921Open in IMG/M
3300005365|Ga0070688_100627116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia825Open in IMG/M
3300005366|Ga0070659_101624899All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300005406|Ga0070703_10076049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1133Open in IMG/M
3300005439|Ga0070711_100090649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2202Open in IMG/M
3300005440|Ga0070705_100279862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1185Open in IMG/M
3300005455|Ga0070663_101432242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia613Open in IMG/M
3300005456|Ga0070678_100002951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9429Open in IMG/M
3300005532|Ga0070739_10564146All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005536|Ga0070697_101701102All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300005536|Ga0070697_102004944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300005578|Ga0068854_101089981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia711Open in IMG/M
3300005718|Ga0068866_10454224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia838Open in IMG/M
3300006028|Ga0070717_10826571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia843Open in IMG/M
3300006871|Ga0075434_101197513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium772Open in IMG/M
3300006880|Ga0075429_101517816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora583Open in IMG/M
3300006904|Ga0075424_101528732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria708Open in IMG/M
3300006914|Ga0075436_100772801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300007004|Ga0079218_11084395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia814Open in IMG/M
3300009012|Ga0066710_102169382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria813Open in IMG/M
3300009036|Ga0105244_10360340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria670Open in IMG/M
3300009090|Ga0099827_11125987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria682Open in IMG/M
3300009147|Ga0114129_13203959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300009789|Ga0126307_10838976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria742Open in IMG/M
3300009811|Ga0105084_1012315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1335Open in IMG/M
3300010044|Ga0126310_11785138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300010045|Ga0126311_11271134Not Available611Open in IMG/M
3300010154|Ga0127503_10071289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria862Open in IMG/M
3300010303|Ga0134082_10330404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300010335|Ga0134063_10209016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria920Open in IMG/M
3300010371|Ga0134125_13082266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300010373|Ga0134128_10754632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1079Open in IMG/M
3300010375|Ga0105239_10976474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria973Open in IMG/M
3300010399|Ga0134127_13144148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300012014|Ga0120159_1120196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium738Open in IMG/M
3300012189|Ga0137388_11279148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa → Asanoa ishikariensis672Open in IMG/M
3300012204|Ga0137374_10519586Not Available921Open in IMG/M
3300012356|Ga0137371_10967545All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012360|Ga0137375_10005519All Organisms → cellular organisms → Bacteria15018Open in IMG/M
3300012360|Ga0137375_10298071Not Available1459Open in IMG/M
3300012469|Ga0150984_110027472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1369Open in IMG/M
3300012897|Ga0157285_10173254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria659Open in IMG/M
3300013102|Ga0157371_11325438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300013104|Ga0157370_11323376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300013308|Ga0157375_13326482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria536Open in IMG/M
3300013770|Ga0120123_1011226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1726Open in IMG/M
3300013772|Ga0120158_10333520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria720Open in IMG/M
3300018051|Ga0184620_10097590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria901Open in IMG/M
3300018422|Ga0190265_11174931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria886Open in IMG/M
3300019356|Ga0173481_10044926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1493Open in IMG/M
3300020077|Ga0206351_10993205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300020081|Ga0206354_10990428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1050Open in IMG/M
3300022756|Ga0222622_11437048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300025924|Ga0207694_10030448All Organisms → cellular organisms → Bacteria4122Open in IMG/M
3300025928|Ga0207700_11731502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria551Open in IMG/M
3300025929|Ga0207664_10011642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter6265Open in IMG/M
3300026536|Ga0209058_1186269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria894Open in IMG/M
3300027655|Ga0209388_1167502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae617Open in IMG/M
3300027821|Ga0209811_10042041All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300027862|Ga0209701_10055381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2534Open in IMG/M
3300028705|Ga0307276_10167116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300028709|Ga0307279_10091107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300028710|Ga0307322_10014940All Organisms → cellular organisms → Bacteria1750Open in IMG/M
3300028714|Ga0307309_10063136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria828Open in IMG/M
3300028716|Ga0307311_10161833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300028718|Ga0307307_10117686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria818Open in IMG/M
3300028720|Ga0307317_10155149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria769Open in IMG/M
3300028720|Ga0307317_10209047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300028755|Ga0307316_10015312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2411Open in IMG/M
3300028755|Ga0307316_10126076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria904Open in IMG/M
3300028768|Ga0307280_10040308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1431Open in IMG/M
3300028771|Ga0307320_10001476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8569Open in IMG/M
3300028784|Ga0307282_10054057All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300028787|Ga0307323_10144359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria858Open in IMG/M
3300028787|Ga0307323_10274733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300028793|Ga0307299_10099701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1085Open in IMG/M
3300028799|Ga0307284_10001929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5409Open in IMG/M
3300028803|Ga0307281_10441437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria502Open in IMG/M
3300028807|Ga0307305_10082012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1489Open in IMG/M
3300028807|Ga0307305_10371838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300028824|Ga0307310_10095822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1314Open in IMG/M
3300028824|Ga0307310_10692588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300028872|Ga0307314_10023277All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300028875|Ga0307289_10411236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300028878|Ga0307278_10313870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium692Open in IMG/M
3300028880|Ga0307300_10097096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium886Open in IMG/M
3300028884|Ga0307308_10339083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium720Open in IMG/M
3300031231|Ga0170824_105372692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium620Open in IMG/M
3300032180|Ga0307471_102534973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria649Open in IMG/M
3300034115|Ga0364945_0240229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia558Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil31.07%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.85%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.88%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.91%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.94%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.94%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.97%
Permafrost And Active Layer SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil0.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.97%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.97%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.97%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.97%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002028Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_A17EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10456405153300000956SoilAVSDRGFFDTFKESAALAKHVAAAKKDSSSELVREIADVHGSGFSVRSKPEELETETLAALQTAKSTLETKAPDELEAYRQFVLDVAQSVADAAGGGETAESGAIEKVKSALQ*
JGI10216J12902_10914111523300000956SoilGLATSPDKVERETMEALQTAKTTLASKAPDELESYRQFVVDVTRSVAQAADGGETAESETIEKVSAALK*
C688J14111_1014925513300001305SoilGFFDTFKEAGALAKHVATGKQSENELIRDLADVRGTGFGLTSSPDKVEQETLGALQTAKAALEAKAPDDLQPYRDLVTQVAESVAKAAPGGDAAESGAIEKVRSAVQ*
A10PFW1_1072301423300001538PermafrostFKEAGALGKHVAQAKQNSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG*
A17_119175533300002028Permafrost And Active Layer SoilFGLTNSPDTVETETLAALRNAKTTLESKAPDELESYRQFVIEVAQSVADAAGGGDVAESDAIEKVSSALR*
Ga0062593_10221989513300004114SoilDRSFFDTFKEAGALAKHVAEAKTKSSSELVRELADVHGSGFGLSSSPDKVEGETMTALAAAKTALQSKAPDELDAYRQFVVDVAQSVSNAAGGGETAETETIEKVRSALT*
Ga0062595_10067864213300004479SoilSSELVREIADVHGSGFSVRSKPEELETETLAALQTAKTTLETKAPDELDAYRQFVLEVAQSVADAAGGGEAAESGAIEKVRSALQ*
Ga0062595_10130116813300004479SoilFFDTFKEAGALGKHLAQAKANSSSDLVRELAEVHGTGFGLTSSPDKVESETLEALKTAKSTLETKAPEELEPYRQFVVDVAQSVADAAGGGDVAESGAIEKVRSAVG*
Ga0070680_10128288013300005336Corn RhizosphereLTSSPDAVETETVAALRSAKTALASKAPDELDSYRQFVVEVAQSVADAAGGGETAESGAIEKINSALR*
Ga0070680_10196294213300005336Corn RhizosphereSDRSFFDTFREAGALGKHIAQAKQSSSSQLIRELADIHGTGFGLTSSPDAVETETLAALRSAKTALASKAPDELESYRQFVVEIAQSVADAAGGGDSAEQGAIEKINSALR*
Ga0070660_10002048173300005339Corn RhizosphereDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTKPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLDVAQSVSDAAGGGEAAESGAIEKVRSALA*
Ga0070687_10006642143300005343Switchgrass RhizosphereTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLDVAQSVSDAAGGGEAAESGAIEKVRSALA*
Ga0070688_10062711613300005365Switchgrass RhizosphereHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0070659_10162489913300005366Corn RhizosphereAGALGKHMAQAKQSSSSELIRELADTHGTGFGVTARPEEVERETFAALQTAKATLESKAPDDLEPYRQLVLEVARSVADAAGGGEPAEGEAITRIESALR*
Ga0070703_1007604933300005406Corn, Switchgrass And Miscanthus RhizosphereGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0070711_10009064913300005439Corn, Switchgrass And Miscanthus RhizosphereKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLDVAQSVSDAAGGGEAAESGAIEKVRSALA*
Ga0070705_10027986213300005440Corn, Switchgrass And Miscanthus RhizosphereSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLETAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0070663_10143224213300005455Corn RhizosphereKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0070678_100002951123300005456Miscanthus RhizosphereFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTKPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLDVAQSVSDAAGGGEAAESGAIEKVRSALA*
Ga0070739_1056414613300005532Surface SoilSHLVRELADIHGTGFGLTSSPDAVETETLAALRSAKTALASKAPDELDSYRRFVVEVAQSVADAAGGGETAESGAIEKINSALR*
Ga0070697_10170110223300005536Corn, Switchgrass And Miscanthus RhizosphereAKQSSSSELVRELADIHGSRFGVTTSADKLENETLAALQTAKTTLESKAPDELDPYREFVMDVAQSVASAAGGGDAAESAAIEKVRSAVA*
Ga0070697_10200494423300005536Corn, Switchgrass And Miscanthus RhizosphereLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKTTLESKAPDELEPYRQFVLEIAQSVSAAAGGGEAAESGAIEKVRSALA*
Ga0068854_10108998113300005578Corn RhizosphereDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0068866_1045422413300005718Miscanthus RhizosphereDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0070717_1082657113300006028Corn, Switchgrass And Miscanthus RhizosphereLGKHIAQAKQSNSSQLVRELADIHGTGFGLTSSPDKVETETLAALRSAKAALASKAPDELESYRQFVVEVARSVADAAGGGETAEGGAIEKINSALR*
Ga0075434_10119751313300006871Populus RhizosphereESSSELVREIADVHGSGFSVRSKPEELETETLAALQTAKTALETKAPDELDAYRQFVLEVAQSVADAAGGGEAAETGAIEKVRSALQ*
Ga0075429_10151781623300006880Populus RhizosphereQESSSELVREIADVHGSGFSVRSKPEELETETLAALQTAKTTLETKAPDELDAYRQFVLEVAQSVADAAGGGEAAETGAIEKVRSALQ*
Ga0075424_10152873213300006904Populus RhizosphereHGTGFGLTLSPDAVEGQTLEALRSAKATLASKAPDELDAYRQFVLEVAQSVADAAGGGEPAESDAIEKLRSALH*
Ga0075436_10077280113300006914Populus RhizosphereSDRGFFDTFKEAGALSKHLAEAKTKSSSELVREVANVHGSGFGLSSSPDKVESETLAALQTAKTSLQSKAPEELEPYKQLVVDVAESVSKAAGGGETAETAAIEKVKSSLA*
Ga0079218_1108439513300007004Agricultural SoilRELADTRGTGFGVASSPDKVERETMEALQAAKTTLASKAPEDLDSYRQFVVDVTRSVAQAAEGGETAESETVEKVSAALS*
Ga0066710_10216938213300009012Grasslands SoilSFGPTSSPDNVQHETLEALLSAKTTLESKAPDELEPYRQFVVDVAHSVADAAVGGELAESGAIEKVRSAIA
Ga0105244_1036034013300009036Miscanthus RhizosphereFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLETAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0099827_1112598713300009090Vadose Zone SoilSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVEHETLEALRSAKTTLESKAPEELEPYRQFVVEVAQSVANAATGGEPAESGAIEKVRSAIG*
Ga0114129_1320395923300009147Populus RhizosphereAGVLGKHLAQAKHDNSSEFIRELADTHGTGFGFTTSPDKVEQETLEALQTAKTTLASKAPDELDSYRQFVVDVTRSVAKAADGGETAESETIEKVSAALK*
Ga0126307_1083897623300009789Serpentine SoilVRELADVRGTGFGLTASPDKVEQETLDALRTAKSALESKSPEDLEPYRQFVVEVAQSVANAAGGGDTAESGAVEKVRSAVG*
Ga0105084_101231513300009811Groundwater SandDVRGAGFGLTASPDQVERETLGALQSAKTTLEAKAPEELEPYRQFVVEVAQSVAAAAPGGESSETGAVEKVRSAVA*
Ga0126310_1178513823300010044Serpentine SoilFFDTFKEAGALAKHVAQAKQTSQSELIRELAEVHGTGFGLTSDPEKVEQETLSALQTARSALESKAPEDLQAYRDLVVEVAQSVAQAAGGGDAAESGAIEKVRSAVA*
Ga0126311_1127113413300010045Serpentine SoilTGFGLTSSPDAVESETLTALQSAKATLEAKAPNELGSYRELVLEVAQSVSDAAGGGETAEAGAIEKISSALQ*
Ga0127503_1007128933300010154SoilGFGVTTSPDVVERETLEALHTAKTTLESKAPDELEPYRQFVLEVAQSVSDAAGGGEVAESGAIEKVRSALA*
Ga0134082_1033040413300010303Grasslands SoilFFDTFKEVGALGKHVAQAKQSSSSELVRELGDLHGTGFGLTASPDKVESETLAALQTAKTTLESKAPDELEPYREFVVEVAQSVADAAGGGEAAEGGAIEKVRSAVA*
Ga0134063_1020901623300010335Grasslands SoilGKHVAQAKQSSSSELVRELGDLHGTGFGLTASPDKVESETLAALQTAKTTLESKAPDELEPYREFVVEVAQSVADAAGGGEAAESGAIEKVRSAVA*
Ga0134125_1308226623300010371Terrestrial SoilFKEAGALGKHVAQAKQSSSSDLVRDLADLHGSGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDTAESGAIEKVRSAVG*
Ga0134128_1075463223300010373Terrestrial SoilLAGPSSGRRSTPGAVETETLAALQSAKTALASKAPDELDSYRQFVVEVAQSVADAAGGGETAERAAIEKINSALR*
Ga0105239_1097647413300010375Corn RhizosphereTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0134127_1314414813300010399Terrestrial SoilQTGSSELVRELADVHGTGFGVTTSPDVVERETMEALHTAKTTLESKAPDELEPYRQFVLEIAQSVSDAAGGGEAAESGAIEKVRSALA*
Ga0120159_112019623300012014PermafrostGKHIAQAKQSNSSELVRELAEIHGTGFGLTSSPDPVEAETLAALQSAKTTLESKAPDELESYRQFVVEVAQSVADAAGGGETAEGSAIDKINSALR*
Ga0137388_1127914813300012189Vadose Zone SoilLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELADVRGTGFGLTSSPDKVEHETVEALQSAKATLEAKAPEELEPYRQFVVDVAQSVADAARGGESAESGAIEKVRSAIG*
Ga0137374_1051958633300012204Vadose Zone SoilVHGTGFGLTSSPDKVETETLAALQTAKATLESKAPDELEPYRSFVVEVAQSVSDAAGGGEAAESGAIEKVRSAVA*
Ga0137371_1096754513300012356Vadose Zone SoilLTSSPDKVEHETLEALRSAKTTLESKAPDELEPYRQFVVEVAQSVASAAGGGEAAESGAIEKVRSAIGP*
Ga0137375_10005519203300012360Vadose Zone SoilFFDTFKEAGALGKHVATAKKSASSELVRELADIHGTGFGLTSSPDKVEQETLAALQTAKTTLESKAPDELQPYRDLVIEVAQSVASAAPGGDASESGAIEKVRSAVA*
Ga0137375_1029807113300012360Vadose Zone SoilRGTGFGLMSSPDEVENETLEALQTAKTTLESKAPDELESYRQFVVEVAQSVADAAGGGETTEGGAIEKVKSAFQ*
Ga0150984_11002747213300012469Avena Fatua RhizosphereSDRSFFDTFKEAGAMAKHVAQARQSGSSDLIRELAEIHGTGFGVTSAPEKVEHETLDALRVAKQALEAKAPEELDAYRQLVLDVAQSVAGAASGGDGAEQQAIEKVRSAVS*
Ga0157285_1017325423300012897SoilELADTRGTGFGVATSPDKVERETLEALQNAKSTLASKAPDELDSYRQFVVDVTRSVAQAADGGENAESETIEKVSAALK*
Ga0157371_1132543823300013102Corn RhizosphereGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA*
Ga0157370_1132337613300013104Corn RhizosphereQSNPSHLVRELASIHGSGFGLTSSPDAVETETLAALRSAKTALASKAPDELDSYRQSVVEVAQSVADAAGGGETAESGAIEKISSALR*
Ga0157375_1332648223300013308Miscanthus RhizosphereDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTKPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLDVAQSVSDAAGGGEAAESGAIEKVRSALA*
Ga0120123_101122613300013770PermafrostREVASIHGTGFGLTNSPDTVETETLAALRNAKTTLESKAPDELESYRQFVIEVAQSVADAAGGGDVAESDAIEKVSSALR*
Ga0120158_1033352023300013772PermafrostEAGALGKHIAQAKQSNSSELVRELAEIHGTGFGLTSSPDPVEAETLAALQSAKTALDSKAPDELESYRQFVVEVARSVADAAGGGETAEGGAIEKINSALR*
Ga0184620_1009759023300018051Groundwater SedimentLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0190265_1117493113300018422SoilSFFDTFKEAGVLGKHLAHAKQSNSSEFIRELADTRGTGFGLTTAPDKVERETLEALQSAKTTLTSKAPNELDSYRQFVVDVTRSVAQAADGGETAESETIEKVNAALK
Ga0173481_1004492613300019356SoilDNPSEFIRELADTRGTGFGVATSPDKVERETLEALQNAKTTLASKAPDELDSYRQFVVDVTRSVAQAADGGETAESETIEKVSAALK
Ga0173482_1042102923300019361SoilGLTASPEKVERETLEALGNAKAALESKAPGELDSYRQFVVEIARSVGEAAGGGEKAEDAAVERVESALR
Ga0193696_115959123300020016SoilGVTTSPDVVERETLEALHTAKTTLESKAPDELEPYRQFVLEIARSVSDAAGGGEAAESGAIEKVRSALA
Ga0206351_1099320523300020077Corn, Switchgrass And Miscanthus RhizosphereKEAGALGKHIAQAKQSNPSQLVRELADIHGTGFGLTSSPDAVETETVAALRSAKTALASKAPDELDSYRQFVVEVAQSVADAAGGGETAESGAIEKINSALR
Ga0206354_1099042823300020081Corn, Switchgrass And Miscanthus RhizosphereTGFGLTSSPDAVETETLAALRSAKTALASKAPDELESYRQFVVEIAQSVADAAGGGDSAEQGAIEKINSALR
Ga0222622_1143704823300022756Groundwater SedimentELVRELSDVRGAGFGLTASPDKVERETLEALQTAKTALEAKAPEELQPYRDFVVEVAQSVAAAAPGGDSSESGAIEKVRSAVS
Ga0207694_1003044863300025924Corn RhizosphereKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVLGTAQSVSEAAGGGDAAESAAIEKVRSALA
Ga0207700_1173150213300025928Corn, Switchgrass And Miscanthus RhizosphereDRSFFDTFKEAGALGKHIAQAKQSNSSQLVRELADIHGTGFGLTSSPDKVETETLAALRSAKTALASKAPDELESYRQFVVEVARSVADAAGGGETAEGGAIEKINSALR
Ga0207664_1001164293300025929Agricultural SoilQAKQSNSSQLVRELADIHGTGFGLTSSPGAVETETLAALRSAKTALASKAPDELDSYRQFVVEVAQSVADAAGGGETAERAAIEKINSALR
Ga0209058_118626913300026536SoilSSSSDLVRELADLHGTGFGLTSAPDKVENETLDALRAAKTTLESKAPDELESYRQFVVEVAQSVAEAAGGGEAAESGAIEKVRSAVG
Ga0209388_116750213300027655Vadose Zone SoilSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVREVAEVRGTGFGLTSSPDKVEHETLEALQSAKATLEAKAPEDLEPYRQFVVDVAQSVANAAPGGESAESGAIEKVRSAIG
Ga0209811_1004204113300027821Surface SoilKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKTTLESKAPDELEPYRQFVLEIAQSVSDAAGGGEAAESGAIEKVRSALA
Ga0209701_1005538133300027862Vadose Zone SoilLSDRSFFDTFKEAGALAKHVAAAKQSNTSELVRELADVRGTGFGLTSSPDKVEHETLEALQSAKATLEAKAPDELDPYRQFVVDVAQSVITAVELFK
Ga0307276_1016711613300028705SoilSSSSELVRELADIHGTGFDLTSSPEKVEQETLAALQAAKSALESKAPDELQPYRDLVVEIAQSVASAAPGGDTAESGAIEKVRSAVA
Ga0307279_1009110723300028709SoilAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307322_1001494043300028710SoilLIRELADIHGTGFGVKSSPDAVERETLEALQTAKKTLESKAPDELEPYRQFVLEIAQSVSKAAGGGEAVESAAIEKVRSALA
Ga0307309_1006313613300028714SoilDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307311_1016183323300028716SoilSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLASKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307307_1011768613300028718SoilSELVRELADIHGTAFGLTSSPDEVENQTLEALRSAKTTLESKAPEELGSYREFVVEVARSVGEAAGGGESAEAESVEKIRSALG
Ga0307317_1015514913300028720SoilLHGMGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307317_1020904723300028720SoilRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307316_1001531213300028755SoilGFGVTSSPDKVEHETIEALHSAKATLESKAPEELEAYRQFVVEVAESVGNAAGGGESAESGAIEKVRSAIG
Ga0307316_1012607613300028755SoilLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307280_1004030833300028768SoilFFDTFKEAGALGKHVAAAKQSSTSELVRELADVRGTGFGVTSSPDKVEHETIEALHSAKATLESKAPEELEAYRQFVVEVAESVGNAAGGGESAESGAIEKVRSAIG
Ga0307320_1000147613300028771SoilVRELADVRGTGFGVTSSPDKVEHETIEALHSAKATLESKAPEELEPYRQFVVDVAQSVANAAGGGEPEESGAIEKVRSAIG
Ga0307282_1005405713300028784SoilGTAKQSGSSELVRELSDVRGAGFGLTASPDKVERETLEALQTAKAALEAKAPEELQPYRDFVVEVAQSVAAAAPGGDSSESGAIEKVRSAVS
Ga0307323_1014435913300028787SoilGFGVKSSPDAVERETLEALQTAKKTLESKAPDELEPYREFVLEIAQSVSEAAGGGDAAESAAIEKVRSALA
Ga0307323_1027473313300028787SoilGFFDTFKEAGALSKHVAGAKQSGSSELVRELADVRGTGFGLTASPDKVERETLEALQTAKVALQSKAPDELQPYRDFVVEVAQSVAAAAPGGESSESGAIEKVRSAVS
Ga0307299_1009970133300028793SoilGSSELVRELADVRGAGFGVTASPDKVERETLEALHTAKAALESKAPDELQPYRDFVVEVAQSVAAAAPGGESSESGAIEKVRSAVS
Ga0307284_1000192963300028799SoilGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVDVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307281_1044143713300028803SoilSEFIRELAETRGTGFGVTTSPDKVERETLEALQSAKTTLASKAPDELDSYRQFVVDVTRSVARAADGGETAESETIEKVSAALK
Ga0307305_1008201223300028807SoilYSFKEAGALGKHVAQAKQSSSSDLVRELADLHGTGFGLTSSPDKVENETLEALRAAKTTLQSKAPDELEPYRHFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307305_1037183823300028807SoilADIHGTGFGVKSSPDAVERETLEALQTAKKTLESKAPDELEPYREFVLEIAQSVSEAAGGGDAAESAAIEKVRSALA
Ga0307310_1009582213300028824SoilSFFDSFQEAGALGKHVAQAKQSSSSDLVRDLADLHGMGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFVVEVAQSVADAAGGGDAAESGAIEKVRSAVG
Ga0307310_1069258813300028824SoilFFDTFKEAGALGKHVAAAKKSSTSELVRELADVRGTGFGVTSSPDKVEHETIEALHSAKATLESKAPEELEAYRQFVVQVAESVGNAAGGGESAESGAIEKVRSAIG
Ga0307314_1002327713300028872SoilESNELIRELADIHGTGFGVKSSPDAVERETLEALQTAKKTLESKAPDELEPYREFVLEIAQSVSEAAGGGDAAESAAIEKVRSALA
Ga0307289_1041123613300028875SoilAKHVAAAKQSGSSELVRELADVRGAGFGVTASPDKVERETLEALHTAKAALESKAPDELQPYRDFVVEVAQSVAAAAPGGESSESGAIEKVRSAVS
Ga0307278_1031387023300028878SoilFKEAGALAKHVAGAKQSGSSELVSELADTRGGGFGLTASPDKVERETLEALQTAKAALESKAPDELQPYRDFVVEVAQSVAAAAPGGESSESGTIEKVRSAVS
Ga0307300_1009709613300028880SoilFDTFKEAGALAKHVAGAKQSGSSELVRELADTRGGGFGLTASPDKVERETLEALQTAKATLESKAPDELQPYRDFVVDVAQSVAAAAPGGESSESGAIEKVRSAVS
Ga0307308_1033908313300028884SoilGFFDTFKEAGALAKHVGTAKQSGSSELVRELSDVRGAGFGLTASPDKVERETLEALQTAKAALEAKAPEELQPYRDFVVEVAQSVAAAAPGGDSSESGAIEKVRSAVS
Ga0170824_10537269213300031231Forest SoilQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHPAKKTLESKAPDELEPYRQFVLETAQSVSEAAGGGDAAESAAIEKVRSALA
Ga0307471_10253497313300032180Hardwood Forest SoilELADVHGTGFGLTSSPDTVEAETLTALQSAKTALEAKTPDELEPYRRFVVEIAQSVADAAGGGETAESGAIEKISAALR
Ga0364945_0240229_2_2743300034115SedimentAKQSNSSEFIRELADTRGPGFGLTTSPDKVERETLEALQNAKTTLESKAPEELGSYRQFVVDVTRSVAEAAGGGETAESETIEKVNAALK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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