Metagenome Family F098792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098792
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	59 residues
Representative Sequence	MKRKKKPAGEGYAFTFHGSYSAKDKAEAKARKRDGFLISRVPRGMRKRRYIVLTERVPF
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.47 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	66.99 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.311 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (13.592 % of family members)
Environment Ontology (ENVO)	Unclassified (41.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.718 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.49% β-sheet: 27.59% Coil/Unstructured: 60.92%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF12728	HTH_17	4.85
PF14659	Phage_int_SAM_3	1.94
PF12161	HsdM_N	1.94
PF01867	Cas_Cas1	0.97
PF17189	Glyco_hydro_30C	0.97
PF01345	DUF11	0.97
PF00589	Phage_integrase	0.97
PF10418	DHODB_Fe-S_bind	0.97
PF13557	Phenol_MetA_deg	0.97
PF02586	SRAP	0.97
PF05593	RHS_repeat	0.97
PF05175	MTS	0.97
PF04851	ResIII	0.97
PF10431	ClpB_D2-small	0.97
PF13620	CarboxypepD_reg	0.97
PF04362	Iron_traffic	0.97
PF00756	Esterase	0.97
PF04261	Dyp_perox	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2924	Fe-S cluster biosynthesis and repair protein YggX	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG1518	CRISPR-Cas system-associated integrase Cas1	Defense mechanisms [V]	0.97
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.97
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.97
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
All Organisms	root	All Organisms	43.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
cellular organisms	root	All Organisms → cellular organisms	43.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.36 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.91 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.91 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.97 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.97 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	0.97 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.97 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.91 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.94 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.94 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.97 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.97 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.91 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	1.94 %
Silvibacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	0.97 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.97 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.97 %
Acidithiobacillus ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrooxidans	0.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.31 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.91 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	1.94 %
Granulicella sp. GAS466	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	0.97 %
Silvibacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	0.97 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.97 %
Acidithiobacillus ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrooxidans	0.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10007356	All Organisms → cellular organisms → Bacteria	3224	Open in IMG/M
3300005712\|Ga0070764_10197260	Not Available	1127	Open in IMG/M
3300006893\|Ga0073928_10208401	Not Available	1525	Open in IMG/M
3300009518\|Ga0116128_1000959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13364	Open in IMG/M
3300009518\|Ga0116128_1020918	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300009524\|Ga0116225_1297263	Not Available	721	Open in IMG/M
3300009623\|Ga0116133_1002637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	4803	Open in IMG/M
3300009630\|Ga0116114_1045831	Not Available	1244	Open in IMG/M
3300010339\|Ga0074046_10307266	Not Available	973	Open in IMG/M
3300010339\|Ga0074046_10462436	Not Available	760	Open in IMG/M
3300010341\|Ga0074045_10436150	Not Available	846	Open in IMG/M
3300010371\|Ga0134125_10138395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	2710	Open in IMG/M
3300010396\|Ga0134126_10840442	Not Available	1035	Open in IMG/M
3300014152\|Ga0181533_1061782	Not Available	1854	Open in IMG/M
3300014152\|Ga0181533_1325289	Not Available	553	Open in IMG/M
3300014155\|Ga0181524_10114971	Not Available	1466	Open in IMG/M
3300014158\|Ga0181521_10274606	Not Available	877	Open in IMG/M
3300014160\|Ga0181517_10614438	Not Available	543	Open in IMG/M
3300014161\|Ga0181529_10073245	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300014200\|Ga0181526_10922307	Not Available	549	Open in IMG/M
3300014489\|Ga0182018_10124250	Not Available	1492	Open in IMG/M
3300014489\|Ga0182018_10183913	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1177	Open in IMG/M
3300014492\|Ga0182013_10657813	Not Available	529	Open in IMG/M
3300014493\|Ga0182016_10674141	Not Available	582	Open in IMG/M
3300014494\|Ga0182017_10410497	Not Available	837	Open in IMG/M
3300014494\|Ga0182017_10455352	Not Available	787	Open in IMG/M
3300014501\|Ga0182024_10264737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2295	Open in IMG/M
3300014502\|Ga0182021_10587526	Not Available	1332	Open in IMG/M
3300014502\|Ga0182021_10640866	Not Available	1273	Open in IMG/M
3300014655\|Ga0181516_10016138	All Organisms → cellular organisms → Bacteria	3968	Open in IMG/M
3300014838\|Ga0182030_10100142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4008	Open in IMG/M
3300014838\|Ga0182030_10137622	Not Available	3163	Open in IMG/M
3300014838\|Ga0182030_10404022	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300014838\|Ga0182030_10629322	Not Available	1026	Open in IMG/M
3300014838\|Ga0182030_10680290	Not Available	970	Open in IMG/M
3300014838\|Ga0182030_11339479	Not Available	601	Open in IMG/M
3300014839\|Ga0182027_10447669	Not Available	1423	Open in IMG/M
3300014969\|Ga0157376_10253589	Not Available	1645	Open in IMG/M
3300017925\|Ga0187856_1000448	All Organisms → cellular organisms → Bacteria	37629	Open in IMG/M
3300017925\|Ga0187856_1096377	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300017929\|Ga0187849_1122621	Not Available	1075	Open in IMG/M
3300017929\|Ga0187849_1196617	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300017931\|Ga0187877_1004968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	9949	Open in IMG/M
3300017940\|Ga0187853_10010579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5666	Open in IMG/M
3300017941\|Ga0187850_10156305	Not Available	1067	Open in IMG/M
3300017946\|Ga0187879_10083705	Not Available	1840	Open in IMG/M
3300017948\|Ga0187847_10044455	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2567	Open in IMG/M
3300017988\|Ga0181520_10004050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	25012	Open in IMG/M
3300017988\|Ga0181520_10084709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrooxidans	2782	Open in IMG/M
3300018003\|Ga0187876_1088091	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300018013\|Ga0187873_1003123	All Organisms → cellular organisms → Bacteria → Acidobacteria	12092	Open in IMG/M
3300018043\|Ga0187887_10811977	Not Available	553	Open in IMG/M
3300018044\|Ga0187890_10298493	Not Available	905	Open in IMG/M
3300018057\|Ga0187858_10845663	Not Available	540	Open in IMG/M
3300021405\|Ga0210387_11633312	Not Available	548	Open in IMG/M
3300022557\|Ga0212123_10541809	Not Available	746	Open in IMG/M
3300023091\|Ga0224559_1108517	Not Available	1021	Open in IMG/M
3300024295\|Ga0224556_1035534	Not Available	1245	Open in IMG/M
3300025496\|Ga0208191_1031816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300025501\|Ga0208563_1100390	Not Available	558	Open in IMG/M
3300027825\|Ga0209039_10000289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	48729	Open in IMG/M
3300027825\|Ga0209039_10125582	Not Available	1082	Open in IMG/M
3300027854\|Ga0209517_10043236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3520	Open in IMG/M
3300027879\|Ga0209169_10264285	Not Available	902	Open in IMG/M
3300027896\|Ga0209777_10002071	All Organisms → cellular organisms → Bacteria	27223	Open in IMG/M
3300028560\|Ga0302144_10282129	Not Available	538	Open in IMG/M
3300028572\|Ga0302152_10280895	Not Available	546	Open in IMG/M
3300028666\|Ga0265336_10133131	Not Available	740	Open in IMG/M
3300028783\|Ga0302279_10457268	Not Available	519	Open in IMG/M
3300028788\|Ga0302189_10335939	Not Available	602	Open in IMG/M
3300029907\|Ga0311329_10216851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1451	Open in IMG/M
3300029911\|Ga0311361_10233911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2186	Open in IMG/M
3300029911\|Ga0311361_11181129	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300029913\|Ga0311362_11009764	Not Available	649	Open in IMG/M
3300029914\|Ga0311359_10079521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3273	Open in IMG/M
3300029945\|Ga0311330_11234579	Not Available	540	Open in IMG/M
3300029951\|Ga0311371_10145597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3642	Open in IMG/M
3300029951\|Ga0311371_11189434	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300029951\|Ga0311371_11286875	Not Available	835	Open in IMG/M
3300030114\|Ga0311333_10002022	Not Available	13015	Open in IMG/M
3300030114\|Ga0311333_10486854	Not Available	1009	Open in IMG/M
3300030520\|Ga0311372_10169206	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300030618\|Ga0311354_11199409	Not Available	687	Open in IMG/M
3300031232\|Ga0302323_102005609	Not Available	657	Open in IMG/M
3300031234\|Ga0302325_10386489	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300031234\|Ga0302325_10936659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	1195	Open in IMG/M
3300031524\|Ga0302320_11369019	Not Available	708	Open in IMG/M
3300031670\|Ga0307374_10040717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	5074	Open in IMG/M
3300031708\|Ga0310686_104062148	All Organisms → cellular organisms → Bacteria	22847	Open in IMG/M
3300032805\|Ga0335078_10036294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7318	Open in IMG/M
3300032805\|Ga0335078_10696300	Not Available	1260	Open in IMG/M
3300032895\|Ga0335074_10340430	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300032897\|Ga0335071_10312338	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M
3300032954\|Ga0335083_11365429	Not Available	543	Open in IMG/M
3300033402\|Ga0326728_10019110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13350	Open in IMG/M
3300033402\|Ga0326728_10046011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6573	Open in IMG/M
3300033402\|Ga0326728_10078120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4285	Open in IMG/M
3300033402\|Ga0326728_10216592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1892	Open in IMG/M
3300033402\|Ga0326728_10475699	Not Available	1027	Open in IMG/M
3300033402\|Ga0326728_10658166	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	798	Open in IMG/M
3300033402\|Ga0326728_10825175	Not Available	670	Open in IMG/M
3300034124\|Ga0370483_0000001	All Organisms → cellular organisms → Bacteria → Acidobacteria	110294	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.11%
Aquatic	Environmental → Aquatic	34.95%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	33.01%
Soil	Environmental → Terrestrial → Soil	33.01%
Peat	Environmental → Terrestrial → Peat	30.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	30.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.94%
Loam	Environmental → Terrestrial → Soil → Loam	1.94%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.97%
Clay	Environmental → Terrestrial → Soil → Clay	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	30.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	26.21%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	15.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.97%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.59%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	10.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	7.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.91%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.94%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.97%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100073562	3300003218	Bog Forest Soil	MKHKTKPAGEGYAFMFHGSYSSKSKAEAKARKRDGFFISRVPRGMRKRRYIVLTERVQF*
Ga0070764_101972604	3300005712	Soil	GNPMKRTKKKASEGYAYTFHGSYNIKARAEVKAKKRGGFFISRIPRGMRKRRYIVLTERVPF*
Ga0073928_102084012	3300006893	Iron-Sulfur Acid Spring	MKRKKRPATEGYAYTFHGSFSSKAKAESKAKKRDGFLISRVPRGMNKRRYIVLTERMPF*
Ga0116128_10009592	3300009518	Peatland	MKRKKRPAGDGYAFTFHGSYSAKDKAEAKARKRGGFLISRVPRGMRKRRYIVLTERVPF*
Ga0116128_10209185	3300009518	Peatland	MKRKRRPAGEGYAFMFHGSYTSKDRAEAKARKRDGFLISRIPRGMRKRRYIVLTERVPF*
Ga0116225_12972631	3300009524	Peatlands Soil	RRERACEQAPLAGEGYAYLFHGSYSSKPKAERKAQARSGFLISRVPRGSSKRRYIVLTERTPL*
Ga0116133_10026376	3300009623	Peatland	MKRKKKPAGEGYAFMFHGSYTSKNKAEAKARKRDGFLISRVPHGMRKRRYIVLTERVPF*
Ga0116114_10458313	3300009630	Peatland	MKRKKKPAEEGYAFTFHGSYSAKDKAEAKARKRGGFLISRIPRGMKRRRYIVLTERGPF*
Ga0074046_103072662	3300010339	Bog Forest Soil	MKRKKKPAGEGYAFMFHGSYSSKDKAESKARKRGGFLISRVPRGMNKRRYIVLTERTPF*
Ga0074046_104624361	3300010339	Bog Forest Soil	MRRRKKPAGEGYAFMFHGSYSSKDKAESKARKRGGFLISRVPRGMNKRRYIVLTERTPF*
Ga0074045_104361501	3300010341	Bog Forest Soil	MRKAPNARLPQMKRKRKPAGEGYAFMFHGSYSAKEKAEAKARKRGGFLISRVPRGMKKRRYIVLTERVPF*
Ga0134125_101383952	3300010371	Terrestrial Soil	MKRKRRPAGEGYAFMFHGSYTAKQKAEAKAKRRGGFLISRIPRGTKKRRYVVLTERVPF*
Ga0134126_108404423	3300010396	Terrestrial Soil	MRHKKRPAGDGYAYTFHGSYTTKGKAEAKARKRSGFLISRIPRGTKKRRYVVLTERVPF*
Ga0181533_10617823	3300014152	Bog	MKRKKKTAGEGYSYMFHGSYTSKQKAEAKARKRDGFLISRVPRGMKRRYIVLTPRVPF*
Ga0181533_13252891	3300014152	Bog	PAGEGYAFMFHGSYSSKDKAEGKARKRGGFLISRVPHGMSKRRYIVLTERTPF*
Ga0181524_101149712	3300014155	Bog	MKRKKKPASEGYAFMFHGSYSAKDKAEAKARKRDGFLISRVPRGMRKRRYIVLTERVPF*
Ga0181521_102746061	3300014158	Bog	GYAFMFHGSYSSKDKAESKARKRGGFLISRVPRGMNKRRYIVLTERTPF*
Ga0181517_106144382	3300014160	Bog	MKRKKKPAGEGYLYAFHGSYNSKEKAEAKARKRDGFLISRIPRGMKKRRYIVLTEKVPF*
Ga0181529_100732453	3300014161	Bog	MKRKKKPAGEGYAYMFHGSYTSKDKAEAKARKRDGFLISRVPRGMKKRRYIVLTERVPF*
Ga0181526_109223071	3300014200	Bog	MKRKRKPAGKGFAYIFHGSYNSKQQAEAKAKRRGGFLISRIPRGMRKRRYIVLTERV
Ga0182018_101242503	3300014489	Palsa	MKRKKKPAGEGYAYMFHGSYNSKEKAESKARKRDGFLISRVPRGMRKRRYIVLTERTPF*
Ga0182018_101839132	3300014489	Palsa	MKRKKRPAGEGYAFMFHGSYSSKEKAERKAQKRDGFLISRIPRGMKKRRYIVLSERVPF*
Ga0182013_106578132	3300014492	Bog	MKRKRKKSAGEGYAYAFQGSYSEKSKAESKAKRRGGWLISRIPRGTSKRRFIVLTERVPF
Ga0182016_106741412	3300014493	Bog	KRKKKPAGEGYAYMFHGSYISKEKAENKARKRNGFLISRVPRGMRKRRYIVLTERTPF*
Ga0182017_104104972	3300014494	Fen	MKRKRKHAGEGYAFTFHGSYSSKDKADAKARKRGGFLISRIPRGMKRRRYIVLTERVPF*
Ga0182017_104553522	3300014494	Fen	MKRKKKPSGEGYLYAFHGSYNTKAKAEAKARKRDGFLISRIPRGMKKRRYIVLTERV
Ga0182024_102647374	3300014501	Permafrost	MKRKKRSATEGYAYTFHGSYCSKARAEDKAKKRDGFLISRVPRGMKKRRYIVLTERVPF*
Ga0182021_105875261	3300014502	Fen	MKRKKRPAGEGYAYTFHGSYSSKDKAEAKARKRGGFLISRVPRGMRKRRYIV
Ga0182021_106408662	3300014502	Fen	MKRKKKPSGEGYLYAFHGSYNTKAKAEAKARKRDGFLISRIPRGMKKRRYIVLTERVPF*
Ga0181516_100161383	3300014655	Bog	MKRKRRQAGEGYAFMFHGSYSSKVKAEAKARKRDGFLISRVPRGMRKRRYIVLTERVPF*
Ga0182030_101001424	3300014838	Bog	MKGKRKKKPAGDGYAFTFHGSYSDKRKAESKAKRRGGWLISRVPRGTSMRRYIVLTERLPF*
Ga0182030_101376223	3300014838	Bog	MKRKKKPAGEGYAYLFHGSFTSKDKAEAKARKRDGFLISRVPRGMRKRRYIVLTEKVPF*
Ga0182030_104040222	3300014838	Bog	MKRKKKTAGEGYAFTFHGSYTSKEKAESKARKRGGWLISRVPRGMSKRRYIVLTQQVPF*
Ga0182030_106293221	3300014838	Bog	MKRKKKPAGEGYAYMFHGSYISKEKAENKARKRNGFLISRVPRGMRKRRYIVLTERTPF*
Ga0182030_106802902	3300014838	Bog	MKRRKKPAGEGYAFTFHGSYSAKDKAEAKARKRDGFLISRVPRGMRKRRYIVLTERVPF*
Ga0182030_113394791	3300014838	Bog	MKRRKKPAGEGYAFTFHGSYSSKAKAETKARKRGGWLISRVPRGMSRRRYIVLTEQVPF*
Ga0182027_104476692	3300014839	Fen	MRKTLNTRPHQVKRKSKPAGEGYAYTFHGSYSAKDKAEAKARKRGGFLISRIPRGMKKRRYIVLTERVPF*
Ga0157376_102535892	3300014969	Miscanthus Rhizosphere	MKRKKKHPATDGYAYTFHGSYSSKQKAESKAKKRDGFLISRVPRGTNKRRYIVLTEKIPF
Ga0187856_100044826	3300017925	Peatland	MKRKRRPAGEGYAFMFHGSYTSKDRAEAKARKRDGFLISRIPRGMRKRRYIVLTERVPF
Ga0187856_10963771	3300017925	Peatland	MRRRKKPAGEGYAFMFHGSYSSKDKAESKARKRGGFLISRVPRGMNKRRYIVLTERTPF
Ga0187849_11226214	3300017929	Peatland	KRKKRPAGDGYAFTFHGSYSAKDKAEAKARKRGGFLISRVPRGMRKRRYIVLTERVPF
Ga0187849_11966172	3300017929	Peatland	MKRKKKPAGEGYAFMFHGSYSSKDKAESKARKRGGFLISRVPRGMNKRRYIVLTERTPF
Ga0187877_10049682	3300017931	Peatland	MKRKKRPAGDGYAFTFHGSYSAKDKAEAKARKRGGFLISRVPRGMRKRRYIVLTERVPF
Ga0187853_100105797	3300017940	Peatland	KKRPAGDGYAFTFHGSYSAKDKAEAKARKRGGFLISRVPRGMRKRRYIVLTERVPF
Ga0187850_101563053	3300017941	Peatland	MKRKKRRAGEGHAFMFHGSYSAKDKAEAKARKRGGFLISRIPRGMKRRRYIVLTERVPF
Ga0187879_100837052	3300017946	Peatland	MKRKKKPAGEGYAFMFHGSYTSKNKAEAKARKRDGFLISRVPHGMRKRRYIVLTERVPF
Ga0187847_100444552	3300017948	Peatland	MKRKKKPAGEGYSFEFHGSYSEKGKAQAKAKKRGGWLISRVPRGTSKRRYIVLTERVPF
Ga0181520_1000405011	3300017988	Bog	MKRKKKPAGEGYLYAFHGSYNSKEKAEAKARKRDGFLISRIPRGMKKRRYIVLTEKVPF
Ga0181520_100847092	3300017988	Bog	MKRKRKPAGEGYAFTFHGSYTSKDKAEAKARKRDGFLISRVPRGMRKRRYIVLTERVPF
Ga0187876_10880912	3300018003	Peatland	GEGYAFMFHGSYSSKDKAESKARKRGGFLISRVPRGMNKRRYIVLTERTPF
Ga0187873_10031238	3300018013	Peatland	MKRKRRPAGEGYAFMFHGSYISKDRAEAKARKRDGFLISRIPRGMRKRRYIVLTERVPF
Ga0187887_108119771	3300018043	Peatland	MKRKRKRAGEGYAFTFHGSYSAKDKAKAKARKRGGFLISRIPRGMKRRRYIVLTERVPF
Ga0187890_102984931	3300018044	Peatland	MKRKRKHAGEGFAYIFHGSYNSKQQAEAKAKKRGGFLISRIPRGTRKRRYIVLTERVPF
Ga0187858_108456631	3300018057	Peatland	PAGEGYAYMFHGSYTSKDKAEAKARKRDGFLISRVPRGMKKRRYIVLTERVPF
Ga0210387_116333122	3300021405	Soil	MKRKKRPATEGYAYTFHGSFSSKAKAESKAKKRDGFLISRVPHGMNKRRYIVLTERVPF
Ga0212123_105418091	3300022557	Iron-Sulfur Acid Spring	MKRKKRPATEGYAYTFHGSFSSKAKAESKAKKRDGFLISRVPRGMNKRRYIVLTERMPF
Ga0224559_11085172	3300023091	Soil	MKRRKKTAGEGYAFTFHGSYTSKEKAESKARKRGGWLISRVPRGMSKRRYIVLTQQVPF
Ga0224556_10355342	3300024295	Soil	MKRKKKPAGEGYAYMFHGSYISKEKAENKARKRNGFLISRVPRGMRKRRYIVLTERTPF
Ga0208191_10318163	3300025496	Peatland	RPAGEGYAFMFHGSYTSKDRAEAKARKRDGFLISRIPRGMRKRRYIVLTERVPF
Ga0208563_11003901	3300025501	Peatland	PFFQLWKIRGVFMKRKKRPAGDGYAFTFHGSYSAKDKAEAKARKRGGFLISRVPRGMRKRRYIVLTERVPF
Ga0209039_100002892	3300027825	Bog Forest Soil	MKHKTKPAGEGYAFMFHGSYSSKSKAEAKARKRDGFFISRVPRGMRKRRYIVLTERVQF
Ga0209039_101255822	3300027825	Bog Forest Soil	MKRKKKSAGEGYAFIFHGSYSAKDKAEAKARKRGGFLISRVPRGMKKRRYIVLTERVPF
Ga0209517_100432364	3300027854	Peatlands Soil	MKRKKKPAGEGYAYLFHGSYSSKPKAERKAQARSGFLISRVPRGSSKRRYIVLTERTPL
Ga0209169_102642853	3300027879	Soil	GNPMKRTKKKASEGYAYTFHGSYNIKARAEVKAKKRGGFFISRIPRGMRKRRYIVLTERVPF
Ga0209777_1000207118	3300027896	Freshwater Lake Sediment	MKRRKKPAGEGYAYQFHGSYSSKDKAETKARRRGGWLISRVPRGMSKRRFIVLTERVPF
Ga0302144_102821292	3300028560	Bog	MKRKKKPAGEGYACMFHGSFSSTAKAESKARKWDGFLISRVPRGMSKRRYIVLTERTPF
Ga0302152_102808952	3300028572	Bog	MKRKKKPAGEGYAFTFHGSYSAKDKAEAKARKRDGFLISRVPRGMRKRRYIVLTERVPF
Ga0265336_101331312	3300028666	Rhizosphere	MKRKKKPAGEGYAYAFHGSYSAKDNAEAKARKRGGFLISRVPRGMKKRRYIVLTERVPF
Ga0302279_104572681	3300028783	Bog	MKRKKKPAGEGFACMFHGSFSSTAKAESKARKWDGFLISRVPRGMSKRRYIVLTERTPF
Ga0302189_103359391	3300028788	Bog	LQFKSNRGEPMKRKKKPAGEGFACMFHGSFSSTAKAESKARKWDGFLISRVPRGMSKRRYIVLTERTPF
Ga0311329_102168513	3300029907	Bog	PMKRKKKPAGEGFACMFHGSFSSTAKAESKARKWDGFLISRVPRGMSKRRYIVLTERTPF
Ga0311361_102339111	3300029911	Bog	QFKSNRGEPMKRKKKPAGEGFACMFHGSFSSTAKAESKARKWDGFLISRVPRGMSKRRYIVLTERTPF
Ga0311361_111811291	3300029911	Bog	MRKTLNTRPHQVKRKSKPAGEGYAYTFHGSYSAKDKAEAKARKRGGFLISRIPRGMKKRRYIVLTERVPF
Ga0311362_110097641	3300029913	Bog	MGKRSKARPQSRKSVRRASEGYAFAFHGSFSSKDKAEAKARKRGGFLISRVPHGMKRRRYIVLTERVPF
Ga0311359_100795212	3300029914	Bog	MGKRSKARPQSRKSVRRASEGYAFAFHGSYNSKDKAEAKARKRGGFLISRVPRGMKRRRYIVLTERVPF
Ga0311330_112345792	3300029945	Bog	DIQPKGKLMKRKRKKSAGEGYAYAFHGSYSEKSKAESKAKRRGGWLISRIPRGTSKRRFIVLTERVPF
Ga0311371_101455971	3300029951	Palsa	VMKRKKKQATEGYAYTFHGSFSSKGKAENKARKRDGFLISRVPRGMKRRRYIVLTERVPF
Ga0311371_111894343	3300029951	Palsa	KKKRPATEGYAYTFHGSFSSREKAESKARKRDGFLISRVPRGMKKRRYIVLTERVPF
Ga0311371_112868751	3300029951	Palsa	MKRKKKPAGEGYAYDFHGSYTSKDKAATKAKKRGGFLISRVPRGTRKRRYIVLTERVPF
Ga0311333_100020222	3300030114	Fen	MGKKNKRASKPRRRPSSEGYAVSFHGSYRDKAPAENKAKKRGGFVISRVPRGTSKRRYIVCAERVPF
Ga0311333_104868543	3300030114	Fen	MKRKKKPAGDGYAYTFHGSYSSKDKAEAKARKRDGFLISRIPRGMKRRRYIVLTERVPF
Ga0311372_101692063	3300030520	Palsa	MKRKKKQATEGYAYTFHGSFSSKGKAENKARKRDGFLISRVPRGMKRRRYIVLTERVPF
Ga0311355_118918431	3300030580	Palsa	MKRKKKQATEGYAYTFHGSFSSKGKAENKARKRDGFLISRVPRGMKRR
Ga0311354_111994093	3300030618	Palsa	ATEGFAYTFHGSFSSREKAESKARKRDGFLISRVPRGMKKRRYIVLTERVPF
Ga0302323_1020056092	3300031232	Fen	MKRSNATPHRKRKPAGDGYAYTFHGSYSSKDKAQAKARKRDGFLISRVPRGMRKRRYIVLTERVPF
Ga0302325_103864893	3300031234	Palsa	MKRKKKRPATEGYAYTFHGSFSSREKAESKARKRDGFLISRVPRGMKKRRYIVLTERVPF
Ga0302325_109366594	3300031234	Palsa	ATEGYAYTFHGSFSSKGKAENKARKRDGFLISRVPRGMKRRRYIVLTERVPF
Ga0302320_113690191	3300031524	Bog	MKRKKKTAGEGYAFTFHGSYTSKEKAESKARKRGGWLISRVPRGMSKRRYIVLTQQVPF
Ga0307374_100407177	3300031670	Soil	MKRKKPASDGYAFTFHGSYTSKDKAESKAKRRDGFVISRVPRGRRKRRYIVLTERMPF
Ga0310686_10406214816	3300031708	Soil	MKRKKKPAGEGYAYLFHGSYNSKEKAESKARKRDGFLISRVPRGMRKRRYIVLTERTPF
Ga0335078_100362946	3300032805	Soil	MKRKKRSAGEGYAFMFHGSYTAKNKAEAKAKRRDGFVISRIPRGMRKRRYIVLTERVPF
Ga0335078_106963002	3300032805	Soil	MKRKKKPAGEGYAYEFHGSYNEKAKAERKAKRRGGWLISRVPRGTSKRRYIVLTEKVPF
Ga0335074_103404302	3300032895	Soil	MTRKKRSAGEGYAFMFHGSYTAKNKADAKAKRRDGFVISRIPRGMRRRRYIVLTERVPF
Ga0335071_103123382	3300032897	Soil	MKRKKEPASDGYAFTFHGSFTARGKAEARAKKRDGFVISRVPRGMRKRRYIVMTERVPF
Ga0335083_113654292	3300032954	Soil	TASRGDAMKRKKKPAGEGYAYEFHGSYTEKEKAERKAKRRGGWMISRVPRGTSKRRYIVLTERVPF
Ga0326728_100191106	3300033402	Peat Soil	MKRKKRSAGEGYAFMFHGSYTAKNKAEAKAKRRDGFVISRIPHGMRKRRYIVLTERVPF
Ga0326728_100460115	3300033402	Peat Soil	MTRKRKKPAGEGYAYTFHGSYSEKSKAKSKAKKRGGWLISRVPRGTSRRRYIVLTERVPF
Ga0326728_100781205	3300033402	Peat Soil	MKKKRRPAGVGFVFMFHGSYSSKAKAEAKARKRDGFLISRVPRGMKKRRYIVLTERVPF
Ga0326728_102165922	3300033402	Peat Soil	MKRKRKPAGEGYAFMFHGSYTAKNKAEAKAKKREGFVISRVPRGTHKRRYIVLTERVPF
Ga0326728_104756992	3300033402	Peat Soil	MKRKKRPAGEGYAFTFHGSYSVKDKAEAKARKRGGFLISRIPRGMKRRRYIVLAEKVPF
Ga0326728_106581661	3300033402	Peat Soil	MKRKKKPSGEGYAFSFHGSYSEKSKAKSKAKKRGGWLVSRVPRGMSKRRYIVLTERVPF
Ga0326728_108251752	3300033402	Peat Soil	MKRKKRPAGDGYAYTFHGSYSTKDKAEAKARKRSGFMISRVPRGMKKRRYIVLTERVPF
Ga0370483_0000001_108267_108446	3300034124	Untreated Peat Soil	MKRKKKPAGDGYSFEFHGSYSGKGKAQAKAKKRGGWLISRVPRGTSKRRYIVLTKRVPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences