NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098787

Metagenome / Metatranscriptome Family F098787

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098787
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 80 residues
Representative Sequence VGTETISEIVSNYELTIACEKCGAQSPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Number of Associated Samples 87
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.11 %
% of genes near scaffold ends (potentially truncated) 33.01 %
% of genes from short scaffolds (< 2000 bps) 79.61 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.282 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(19.417 % of family members)
Environment Ontology (ENVO) Unclassified
(55.340 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.340 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.25%    β-sheet: 17.50%    Coil/Unstructured: 36.25%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF02518HATPase_c 33.01
PF11937DUF3455 32.04
PF08502LeuA_dimer 5.83
PF00070Pyr_redox 0.97
PF00486Trans_reg_C 0.97
PF00873ACR_tran 0.97
PF07969Amidohydro_3 0.97
PF01979Amidohydro_1 0.97
PF01053Cys_Met_Meta_PP 0.97
PF08450SGL 0.97
PF14346DUF4398 0.97
PF00903Glyoxalase 0.97
PF13844Glyco_transf_41 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0119Isopropylmalate/homocitrate/citramalate synthasesAmino acid transport and metabolism [E] 5.83
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 0.97
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.97
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.97
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.97
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.97
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.97
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.97
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 0.97
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.97
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.97
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.97
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 0.97

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.35 %
UnclassifiedrootN/A11.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003322|rootL2_10353854All Organisms → cellular organisms → Bacteria → Proteobacteria1209Open in IMG/M
3300004092|Ga0062389_102023546All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300005260|Ga0074072_1000081All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria55553Open in IMG/M
3300005327|Ga0070658_10968216All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea740Open in IMG/M
3300005331|Ga0070670_100238678All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1582Open in IMG/M
3300005332|Ga0066388_101695145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1118Open in IMG/M
3300005344|Ga0070661_100643830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum860Open in IMG/M
3300005367|Ga0070667_100184633All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300005455|Ga0070663_100181697All Organisms → cellular organisms → Bacteria1632Open in IMG/M
3300005529|Ga0070741_10214255All Organisms → cellular organisms → Bacteria → Proteobacteria1863Open in IMG/M
3300005538|Ga0070731_10315500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1038Open in IMG/M
3300005539|Ga0068853_100664256All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia993Open in IMG/M
3300005548|Ga0070665_100021683All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli6460Open in IMG/M
3300005842|Ga0068858_100007818All Organisms → cellular organisms → Bacteria10320Open in IMG/M
3300006893|Ga0073928_11040881Not Available556Open in IMG/M
3300009093|Ga0105240_11159883All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea820Open in IMG/M
3300009093|Ga0105240_11581190Not Available686Open in IMG/M
3300009101|Ga0105247_10010159All Organisms → cellular organisms → Bacteria5702Open in IMG/M
3300009143|Ga0099792_10246390All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300009143|Ga0099792_10490733All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea768Open in IMG/M
3300009174|Ga0105241_10515078All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia1069Open in IMG/M
3300009177|Ga0105248_11669028All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea722Open in IMG/M
3300009545|Ga0105237_10844603All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea922Open in IMG/M
3300009545|Ga0105237_10954501All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea864Open in IMG/M
3300009553|Ga0105249_12102912All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea637Open in IMG/M
3300010159|Ga0099796_10195072All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum819Open in IMG/M
3300010375|Ga0105239_10910299All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1010Open in IMG/M
3300010375|Ga0105239_13148652Not Available537Open in IMG/M
3300010401|Ga0134121_12511621All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea557Open in IMG/M
3300010876|Ga0126361_11295330All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300012207|Ga0137381_10786318All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300012359|Ga0137385_10124219All Organisms → cellular organisms → Bacteria → Proteobacteria2277Open in IMG/M
3300012685|Ga0137397_10983065Not Available622Open in IMG/M
3300012903|Ga0157289_10213176All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea637Open in IMG/M
3300012904|Ga0157282_10029951All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1202Open in IMG/M
3300012923|Ga0137359_10615462All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea952Open in IMG/M
3300012927|Ga0137416_10052061All Organisms → cellular organisms → Bacteria2878Open in IMG/M
3300012927|Ga0137416_10155424All Organisms → cellular organisms → Bacteria → Proteobacteria1795Open in IMG/M
3300012930|Ga0137407_10542568All Organisms → cellular organisms → Bacteria → Proteobacteria1088Open in IMG/M
3300012944|Ga0137410_10740450All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea822Open in IMG/M
3300014168|Ga0181534_10000321All Organisms → cellular organisms → Bacteria → Proteobacteria34873Open in IMG/M
3300014325|Ga0163163_11490588All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea738Open in IMG/M
3300014968|Ga0157379_10080054All Organisms → cellular organisms → Bacteria2926Open in IMG/M
3300014969|Ga0157376_11502423Not Available707Open in IMG/M
3300015241|Ga0137418_10094074All Organisms → cellular organisms → Bacteria → Proteobacteria2704Open in IMG/M
3300015242|Ga0137412_10238612All Organisms → cellular organisms → Bacteria → Proteobacteria1441Open in IMG/M
3300015245|Ga0137409_10043814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4279Open in IMG/M
3300015264|Ga0137403_10336185All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1400Open in IMG/M
3300021086|Ga0179596_10304061All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea796Open in IMG/M
3300021168|Ga0210406_10595393All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea864Open in IMG/M
3300021401|Ga0210393_10812439All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300021479|Ga0210410_10955251All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea745Open in IMG/M
3300022726|Ga0242654_10345985All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300022894|Ga0247778_1007091All Organisms → cellular organisms → Bacteria → Proteobacteria2566Open in IMG/M
3300022897|Ga0247764_1057309All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1212Open in IMG/M
3300022908|Ga0247779_1053564All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1058Open in IMG/M
3300022917|Ga0247777_1149472All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea768Open in IMG/M
3300025321|Ga0207656_10473208Not Available634Open in IMG/M
3300025900|Ga0207710_10044336All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1980Open in IMG/M
3300025903|Ga0207680_10090898All Organisms → cellular organisms → Bacteria → Proteobacteria1941Open in IMG/M
3300025909|Ga0207705_10502651All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales942Open in IMG/M
3300025911|Ga0207654_10740221All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea708Open in IMG/M
3300025913|Ga0207695_11084670All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea680Open in IMG/M
3300025914|Ga0207671_10153777All Organisms → cellular organisms → Bacteria → Proteobacteria1778Open in IMG/M
3300025914|Ga0207671_10197712All Organisms → cellular organisms → Bacteria → Proteobacteria1569Open in IMG/M
3300025914|Ga0207671_11338100All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea557Open in IMG/M
3300025924|Ga0207694_11732403Not Available526Open in IMG/M
3300025961|Ga0207712_11285562All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea654Open in IMG/M
3300026035|Ga0207703_10000401All Organisms → cellular organisms → Bacteria → Proteobacteria46568Open in IMG/M
3300026078|Ga0207702_10156372All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea2078Open in IMG/M
3300026078|Ga0207702_11555597All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300026095|Ga0207676_10537847All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1115Open in IMG/M
3300027738|Ga0208989_10082555All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea1099Open in IMG/M
3300027894|Ga0209068_10938270Not Available513Open in IMG/M
3300027903|Ga0209488_10205081All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300027903|Ga0209488_10287396All Organisms → cellular organisms → Bacteria → Proteobacteria1229Open in IMG/M
3300028047|Ga0209526_10985239Not Available505Open in IMG/M
3300028379|Ga0268266_10004749All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria12921Open in IMG/M
3300028536|Ga0137415_10000433All Organisms → cellular organisms → Bacteria → Proteobacteria39674Open in IMG/M
3300028536|Ga0137415_10204245All Organisms → cellular organisms → Bacteria → Proteobacteria1794Open in IMG/M
3300030339|Ga0311360_11042256All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea645Open in IMG/M
3300030514|Ga0268253_10174804All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum682Open in IMG/M
3300030521|Ga0307511_10046631All Organisms → cellular organisms → Bacteria3560Open in IMG/M
3300030521|Ga0307511_10114955All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300031057|Ga0170834_108029673All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea690Open in IMG/M
3300031128|Ga0170823_10739959All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300031231|Ga0170824_111443741All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales775Open in IMG/M
3300031231|Ga0170824_128245590All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300031446|Ga0170820_13302358All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300031446|Ga0170820_14780104All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum672Open in IMG/M
3300031446|Ga0170820_15945580Not Available546Open in IMG/M
3300031469|Ga0170819_11022622All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300031474|Ga0170818_105655337All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300031474|Ga0170818_110875658All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → lamiids → Lamiales → Oleaceae → Oleeae → Olea → Olea europaea → Olea europaea subsp. europaea664Open in IMG/M
3300031507|Ga0307509_10000001All Organisms → cellular organisms → Bacteria → Proteobacteria629324Open in IMG/M
3300031715|Ga0307476_10015413All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli4871Open in IMG/M
3300031902|Ga0302322_100878826All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300031962|Ga0307479_10268419All Organisms → cellular organisms → Bacteria → Proteobacteria1686Open in IMG/M
3300032180|Ga0307471_103524647Not Available554Open in IMG/M
3300032828|Ga0335080_10029839All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli5949Open in IMG/M
3300033180|Ga0307510_10000013All Organisms → cellular organisms → Bacteria274569Open in IMG/M
3300033180|Ga0307510_10008892All Organisms → cellular organisms → Bacteria → Proteobacteria11968Open in IMG/M
3300034384|Ga0372946_0306272Not Available770Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere12.62%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil9.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.85%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza4.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.85%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter3.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.94%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.94%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.94%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.97%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.97%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.97%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.97%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.97%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.97%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.97%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.97%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.97%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005260Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022894Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5EnvironmentalOpen in IMG/M
3300022897Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4EnvironmentalOpen in IMG/M
3300022908Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5EnvironmentalOpen in IMG/M
3300022917Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030514Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
rootL2_1035385423300003322Sugarcane Root And Bulk SoilVGTETISEIVSNYELAIACEKCGAQIPKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0062389_10202354623300004092Bog Forest SoilMRTLVGTESIAGIVSAYELTISCDKCGAQTPKTIGWIRLHRDMKCPQCSVVIVLNTSRITATIRSVERRLGDLQTQLTERIRKL*
Ga0074072_1000081193300005260SoilVGTESIAQIVSNYELTLACEKCGAQIHKTIGWIRVHRDMKCPQCEAVIVLNTSRLTGTIRSVERRLGDLQSQLTERIRKL*
Ga0070658_1096821623300005327Corn RhizosphereVGTETIAEIVSNYELTIACEKCGAQIPKTIGWVRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0070670_10023867823300005331Switchgrass RhizosphereVGTETIAEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0066388_10169514523300005332Tropical Forest SoilRGSCLGKETIAAIVSAYELSISCEKCGAQTHKTIGWIRSQRDMRCPGCDAVIVLNTSRITRTIRSIERRLGDLQAQLTERIRKL*
Ga0070661_10064383013300005344Corn RhizosphereELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDGVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0070667_10018463323300005367Switchgrass RhizosphereVGTETIAEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAMIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0070663_10018169723300005455Corn RhizosphereVGTETIAEIVSNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDGVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0070741_1021425523300005529Surface SoilVGTETLGEIVNAYELTIGCEKCGAQNQQTIGWIRTHRDMKCPGCDAVIVLNTSRITGTIRSVERRLNDLQSQLTARIRKL*
Ga0070731_1031550023300005538Surface SoilETIAAIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0068853_10066425613300005539Corn RhizosphereVGTETIAEIISNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0070665_10002168343300005548Switchgrass RhizosphereVGTDTISEIVSNYELTIACERCSAQLQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQNQLTERIRKL*
Ga0068858_100007818133300005842Switchgrass RhizosphereVGTETIGEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0073928_1104088123300006893Iron-Sulfur Acid SpringVGTDTIAGIVSAYELTASCEKCSAQTPRTIGWIRLHRDMKCPQCGAVIVLNTSRMTATIRSVERRLGDLQTQLTQRILKL*
Ga0105240_1115988323300009093Corn RhizosphereLIVGTETIAQIVSNYELTIACERCSAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITATIRSVERRLGDLQSQLTERIRKL*
Ga0105240_1158119013300009093Corn RhizosphereVGTETLAEIINAYELTISCEKCGAQTQQSIGWIRVHRDMKCPGCEAVIVLNTSRITGTIRSVERRLNDLQNQLTERIRKL*
Ga0105247_1001015963300009101Switchgrass RhizosphereVGTETIGEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRTL*
Ga0099792_1024639023300009143Vadose Zone SoilTETIAQIVNAYELTIACEKCSAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLAERILKL*
Ga0099792_1049073313300009143Vadose Zone SoilMRLSVGTETIARIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRMTGTIRSVERRLGDLQTQLTERIRKL*
Ga0105241_1051507823300009174Corn RhizosphereVGTETIAEIVSNYELTIACEKCGAQTPRTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0105248_1166902823300009177Switchgrass RhizosphereVGTETIAEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAMIVLNTSRITGTIRSVERRLGDLQSQLT
Ga0105237_1084460313300009545Corn RhizosphereLIVGTETIAQIVSNYELTIACEKCSAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITATIRSVERRLGDLQSQLTERIRKL*
Ga0105237_1095450123300009545Corn RhizosphereVGTETIAEIISNYELTIACDKCGAQTPKPIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0105249_1210291223300009553Switchgrass RhizosphereVGTETIGEIVSNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0099796_1019507223300010159Vadose Zone SoilVGTETIAQIVNAYELTIACEKCSAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLAERILKL*
Ga0105239_1091029923300010375Corn RhizosphereETIGEIISNYELTIACHKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0105239_1314865223300010375Corn RhizosphereVGTETIAEIVSNYELTIACEKCGAQIPKTIGWVRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLSDLQSQLTERIRKL*
Ga0134121_1251162113300010401Terrestrial SoilVGTETIAEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERISKL*
Ga0126361_1129533013300010876Boreal Forest SoilPERTNVGTETIAEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPGCEAVIVLNTSRMTGTIRSVERRLGDLQNQLTERIRKL*
Ga0137381_1078631823300012207Vadose Zone SoilVSAYELTISCEKCGVQSQRTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0137385_1012421933300012359Vadose Zone SoilPTETIAQIVSAYELPISCEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0137397_1098306513300012685Vadose Zone SoilVGTETIAQIVNAYELTISCEKCSAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0157289_1021317623300012903SoilMIVGMETIAEIVSNYELTIACEKCGAQTQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0157282_1002995123300012904SoilMIVGMETISEIVSNYELTIACEKCGAQTQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137359_1061546223300012923Vadose Zone SoilVGTETIAQIVNAYELTIACEKCSAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0137416_1005206113300012927Vadose Zone SoilMTVGTETISEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137416_1015542423300012927Vadose Zone SoilMRSSVGTETIAQIVSAYELTISCEKCGAQSQQTIGWIRLHRDMRCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0137407_1054256823300012930Vadose Zone SoilMIVGTETISEIVSNYELPITCEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137410_1074045023300012944Vadose Zone SoilVGTETISEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0181534_10000321283300014168BogVGTETISEIVSNYELTIACEKCGAQTQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0163163_1149058813300014325Switchgrass RhizosphereVGTETIAEIICNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0157379_1008005433300014968Switchgrass RhizosphereVGTDTIAEIVSAYELTISCEKCGAQTQQAIGWIRAHRDMKCPGCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0157376_1150242323300014969Miscanthus RhizosphereMIVGTETIAEIVSNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDGVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137418_1009407423300015241Vadose Zone SoilMTVGTETISERVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137412_1023861213300015242Vadose Zone SoilVQLARVIVGTETISEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137409_1004381443300015245Vadose Zone SoilMIVGTETISEIVSNYELPITCEKCSAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL*
Ga0137403_1033618523300015264Vadose Zone SoilMRLSVGTETIAEIVSAYELTISCEKCSAQSQRTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL*
Ga0179596_1030406113300021086Vadose Zone SoilMIVGTETISEIVSNYELPITCEKCSAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0210406_1059539313300021168SoilVGTETIAEIVSNYELTIACDKCGAQSQRTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0210393_1081243913300021401SoilTIAEIVSNYELVIACEKCGAQSQKTIGWIRLHRDMKCPGCEAVIVLNTSRMTGTIRSVERRLGDLQNQLTERIRKL
Ga0210410_1095525123300021479SoilVGTETIAQIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0242654_1034598523300022726SoilGTDTIAQIVSNYELTIACDKCGAQSQRTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0247778_100709123300022894Plant LitterMETISEIVSNYELTIACEKCGAQTQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0247764_105730913300022897Plant LitterMETIAEIVSNYELTIACEKCGAQTQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIR
Ga0247779_105356423300022908Plant LitterMIVGTETISEIVSNYELTIACEKCGAQIQKTIGWIRLHRDMKCPQCEAVIVLNTSRITATIRSVERRLGDLQTQLTERIRKL
Ga0247777_114947223300022917Plant LitterMETISEIVSNYELTIACEKCGAQTQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQ
Ga0207656_1047320813300025321Corn RhizosphereVGTETIAEIVSNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDGVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0207710_1004433613300025900Switchgrass RhizosphereVGTETIGEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRK
Ga0207680_1009089823300025903Switchgrass RhizosphereVGTETIAEIISNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0207705_1050265123300025909Corn RhizosphereVGTETIAEIVSNYELTIACEKCGAQIPKTIGWVRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0207654_1074022123300025911Corn RhizosphereVGTETIAEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0207695_1108467013300025913Corn RhizosphereVGTETIAQIVSNYELTIACERCSAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITATIRSVERRLGDLQSQLTERIRKL
Ga0207671_1015377723300025914Corn RhizosphereVGTETLAEIINAYELTISCEKCGAQTQQSIGWIRVHRDMKCPGCEAVIVLNTSRITGTIRSVERRLNDLQNQLTERIRKL
Ga0207671_1019771223300025914Corn RhizosphereVGTETIAEIISNYELTIACDKCGAQTPKPIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0207671_1133810023300025914Corn RhizosphereVGTETISEIVSNYELTIACEKCSAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITATIRSVERRLGDLQSQLTERIRKL
Ga0207694_1173240313300025924Corn RhizosphereVGTETISEIVSNYELAIACEKCGAQTQKTIGWIRLHRDMKCPQCDAVIVLNTSRLTGTIRSVERRL
Ga0207712_1128556223300025961Switchgrass RhizosphereVGTETIGEIVSNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTER
Ga0207703_10000401313300026035Switchgrass RhizosphereVGTETIGEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0207702_1015637213300026078Corn RhizosphereVGTETIAEIVSNYELTIACDKCGAQTPKTIGWIRLHRDMKCPQCDGVIVLNTSRITGTIRSVERRLGDLQS
Ga0207702_1155559723300026078Corn RhizosphereTIACEKCSAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITATIRSVERRLGDLQSQLTERIRKL
Ga0207676_1053784723300026095Switchgrass RhizosphereVGTETIAEIVSNYELPIACDKCGAQTPKTIGWIRLHRDMKCPQCDAMIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0208989_1008255513300027738Forest SoilVGTETIARIVSAYELTISCVKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0209068_1093827023300027894WatershedsMRLVVGTETIAEIVSAYELTIACEKCGAQSPRTIGWIRLHRDMKCPECDAMIVLNTSRITGTIRSVERRLGDLQVQLTERIRKL
Ga0209488_1020508123300027903Vadose Zone SoilPCPAKVRSSVGTETIAQIVNAYELTIACEKCSAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLAERILKL
Ga0209488_1028739623300027903Vadose Zone SoilVGTETIARIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRMTGTIRSVERRLGDLQTQLTERIRKL
Ga0209526_1098523913300028047Forest SoilVQLEGVIVGTDTIAQIVSNYELPIACEKCGAQSQRTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0268266_1000474983300028379Switchgrass RhizosphereVGTDTISEIVSNYELTIACERCSAQLQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQNQLTERIRKL
Ga0137415_1000043343300028536Vadose Zone SoilVGTETISEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0137415_1020424523300028536Vadose Zone SoilVGTETIAQIVSAYELTISCEKCGAQSQQTIGWIRLHRDMRCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0311360_1104225623300030339BogVGTETISKIVSNYELPIACEKCGAQLQKTIGWIRLHRDMKCPQCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0268253_1017480423300030514AgaveLSGLLGLIVSTESIADIVSAYELTIACEKCGAQSPRTIGWIRLHRDMKCPECDAMIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0307511_1004663123300030521EctomycorrhizaVGTDTIAEIVSNYELTIACEKCGAQSQKTIGWIRLHRDMKCPGCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0307511_1011495523300030521EctomycorrhizaGVQIPCPPLMRSSVTTVTIAEIVSAYELTISCEKCGAQSQQTIGWIRQHRDMKCPGRESVIVLNTSRLTGTIRSVERRLGDLQTQLTERIRKL
Ga0170834_10802967323300031057Forest SoilTNSVSAPMRSSVGTKTIAQIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0170823_1073995913300031128Forest SoilLERTTVGTDTIAQIVSNYELTIACDKCGAQSQRTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0170824_11144374123300031231Forest SoilVSNYELAIACEKCGGQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0170824_12824559023300031231Forest SoilQLERVIVGTETIAQIVSNYELTIACEKCGAQTPKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0170820_1330235823300031446Forest SoilYELTILCEKCGAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0170820_1478010413300031446Forest SoilAEIVSNYELTIACEKCGAQSQKTIGWIRLHRDMKCPGCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0170820_1594558023300031446Forest SoilMIVGTETIAEIVSNYELPIACEKCGAQSQRTIGWLRLHRDMKCPVCEAVIVLNTSRLTGTIRSVERRLGDLQSQLTERIRKL
Ga0170819_1102262223300031469Forest SoilGLERVIVGTETIAEIVSNYELTIACEKCGAQSQKTIGWIRLHRDMKCPGCEAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0170818_10565533713300031474Forest SoilETISEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0170818_11087565813300031474Forest SoilARMIVGTETISEIVSNYELPIACEKCGAQSQRTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0307509_100000011933300031507EctomycorrhizaVGTESIADIVSNYELTIACEKCGAQTPRTIGWIRQHRDMKCPECDAIIVLNTSRITGTIRSVERRLGDLRTQLTERIRKL
Ga0307476_1001541343300031715Hardwood Forest SoilMGTLEEIVSAYELTIDCEQCGAKTPKPIGWIRLHRDMTCPGCTAVIVLNTSRITATIRGVERKLGDLQTQLTERIRKL
Ga0302322_10087882623300031902FenVSAYELTIACEKCGAQSPRTIGWIRQHRDMKCPACDAMIVLNTSRLTGTIRSVERRLGDLQVQLTERIRKL
Ga0307479_1026841923300031962Hardwood Forest SoilVGKETIARIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0307471_10352464723300032180Hardwood Forest SoilVGTETIAQIVNAYELTISCEKCSAQSQQTIGWIRQHRDMKCPGCDAVIVLNTSRITGTIRSVERRLGDLQTQLTERIRKL
Ga0335080_1002983953300032828SoilVPKETIANIVSAYELTITCQKCGAQSQKTIGWIRVHRDMKCSACDAVIVLNTSRITSTIRSVERRLGDLQSQLTERIRKL
Ga0307510_100000131483300033180EctomycorrhizaVGTETISEIVSNYELTIACEKCGAQSPKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0307510_1000889223300033180EctomycorrhizaVGTETISEIVSNYELPIACEKCGAQSQKTIGWIRLHRDMKCPQCDAVIVLNTSRITGTIRSVERRLGDLQSQLTERIRKL
Ga0372946_0306272_231_4853300034384SoilMRLSVGTETIARIVSAYELTISCEKCGAQSQQTIGWIRLHRDMKCPGCDAVIVLNTSRMTGTIRSVERRLGDLQTQLTERIRKL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.