Metagenome / Metatranscriptome Family F098780

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098780
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	42 residues
Representative Sequence	THEKGTLKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL
Number of Associated Samples	75
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	97.09 %
% of genes from short scaffolds (< 2000 bps)	89.32 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (58.252 % of family members)
Environment Ontology (ENVO)	Unclassified (55.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 35.21% Coil/Unstructured: 64.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10127	RlaP	4.85
PF10079	BshC	4.85
PF02472	ExbD	2.91
PF01381	HTH_3	2.91
PF13505	OMP_b-brl	1.94
PF13419	HAD_2	0.97
PF12844	HTH_19	0.97
PF00441	Acyl-CoA_dh_1	0.97
PF08241	Methyltransf_11	0.97
PF02518	HATPase_c	0.97
PF02786	CPSase_L_D2	0.97
PF02133	Transp_cyt_pur	0.97
PF00480	ROK	0.97
PF13372	Alginate_exp	0.97
PF03069	FmdA_AmdA	0.97
PF01740	STAS	0.97
PF00266	Aminotran_5	0.97
PF06123	CreD	0.97
PF13646	HEAT_2	0.97
PF01546	Peptidase_M20	0.97
PF12732	YtxH	0.97
PF00793	DAHP_synth_1	0.97
PF02585	PIG-L	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	2.91
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.94
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.97
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.97
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.97
COG4452	Inner membrane protein CreD involved in colicin E2 resistance	Defense mechanisms [V]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.82 %
Unclassified	root	N/A	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.16 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.88 %
Unclassified	root	N/A	1.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.50 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	9.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.88 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	1.94 %
Unclassified	root	N/A	1.94 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.50 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	9.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.88 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	1.94 %
Unclassified	root	N/A	1.94 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.50 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	9.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.88 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	1.94 %
Unclassified	root	N/A	1.94 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps_contig89168.52893	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104865743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300001661\|JGI12053J15887_10266817	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300002914\|JGI25617J43924_10102097	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300005437\|Ga0070710_10098752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1735	Open in IMG/M
3300005537\|Ga0070730_10356921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300005586\|Ga0066691_10795103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	558	Open in IMG/M
3300006914\|Ga0075436_100159529	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300007258\|Ga0099793_10267562	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300007788\|Ga0099795_10077837	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300007819\|Ga0104322_142691	All Organisms → cellular organisms → Bacteria	2856	Open in IMG/M
3300009038\|Ga0099829_10425534	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300009088\|Ga0099830_10413872	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300009088\|Ga0099830_11763185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009089\|Ga0099828_11322775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	637	Open in IMG/M
3300010048\|Ga0126373_11385768	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300010082\|Ga0127469_141315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	624	Open in IMG/M
3300010159\|Ga0099796_10133932	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300010337\|Ga0134062_10470550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	627	Open in IMG/M
3300010360\|Ga0126372_11485504	Not Available	713	Open in IMG/M
3300010362\|Ga0126377_12171604	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300011269\|Ga0137392_10380250	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300011269\|Ga0137392_11455522	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300011270\|Ga0137391_10433130	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300011270\|Ga0137391_11243860	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300011271\|Ga0137393_10460941	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300012189\|Ga0137388_10413514	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300012189\|Ga0137388_11809035	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012189\|Ga0137388_11812313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012198\|Ga0137364_10357053	All Organisms → cellular organisms → Bacteria → Acidobacteria	1091	Open in IMG/M
3300012200\|Ga0137382_10415589	All Organisms → cellular organisms → Bacteria → Acidobacteria	949	Open in IMG/M
3300012202\|Ga0137363_10551555	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012203\|Ga0137399_10344112	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012203\|Ga0137399_10370394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300012208\|Ga0137376_11265972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	627	Open in IMG/M
3300012361\|Ga0137360_10239007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1487	Open in IMG/M
3300012362\|Ga0137361_10228557	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300012582\|Ga0137358_10220366	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300012685\|Ga0137397_11247578	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012917\|Ga0137395_10518927	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300012918\|Ga0137396_10652273	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300012918\|Ga0137396_11137240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	555	Open in IMG/M
3300012923\|Ga0137359_11230318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012924\|Ga0137413_10615501	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300012924\|Ga0137413_11382310	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012925\|Ga0137419_10054131	All Organisms → cellular organisms → Bacteria → Acidobacteria	2601	Open in IMG/M
3300012925\|Ga0137419_10623290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	868	Open in IMG/M
3300012925\|Ga0137419_11962477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	503	Open in IMG/M
3300012927\|Ga0137416_10475574	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300012927\|Ga0137416_12247003	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300012929\|Ga0137404_11310344	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012944\|Ga0137410_11348596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	618	Open in IMG/M
3300015053\|Ga0137405_1393116	All Organisms → cellular organisms → Bacteria → Acidobacteria	6261	Open in IMG/M
3300015054\|Ga0137420_1233036	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300015242\|Ga0137412_10257916	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300015242\|Ga0137412_10259683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1372	Open in IMG/M
3300020140\|Ga0179590_1005212	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300020140\|Ga0179590_1142371	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300020170\|Ga0179594_10347626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	562	Open in IMG/M
3300020199\|Ga0179592_10057300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1776	Open in IMG/M
3300020199\|Ga0179592_10236450	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300020199\|Ga0179592_10295728	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300020199\|Ga0179592_10307667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300021088\|Ga0210404_10004679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5495	Open in IMG/M
3300021088\|Ga0210404_10349574	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300021178\|Ga0210408_10105602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2214	Open in IMG/M
3300021178\|Ga0210408_10658951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300021407\|Ga0210383_10415300	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300021420\|Ga0210394_11723656	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300021432\|Ga0210384_10268031	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300021559\|Ga0210409_10483367	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300024288\|Ga0179589_10185445	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300026328\|Ga0209802_1225231	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300026332\|Ga0209803_1256520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	602	Open in IMG/M
3300026537\|Ga0209157_1143204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300026551\|Ga0209648_10109195	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300026551\|Ga0209648_10117956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2147	Open in IMG/M
3300026551\|Ga0209648_10181630	All Organisms → cellular organisms → Bacteria → Acidobacteria	1627	Open in IMG/M
3300027643\|Ga0209076_1075333	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300027655\|Ga0209388_1098900	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300027660\|Ga0209736_1206666	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300027846\|Ga0209180_10101677	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300027846\|Ga0209180_10459965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300027846\|Ga0209180_10768514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300027862\|Ga0209701_10215592	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300027875\|Ga0209283_10131210	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300027875\|Ga0209283_10810112	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300027903\|Ga0209488_10114212	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300027903\|Ga0209488_10224300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1413	Open in IMG/M
3300027910\|Ga0209583_10783263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300028047\|Ga0209526_10460115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300031231\|Ga0170824_120403550	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300031718\|Ga0307474_10445738	Not Available	1011	Open in IMG/M
3300031720\|Ga0307469_10380197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300031720\|Ga0307469_10422741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1145	Open in IMG/M
3300031754\|Ga0307475_10090515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2372	Open in IMG/M
3300031754\|Ga0307475_10487086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300031962\|Ga0307479_10106162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2731	Open in IMG/M
3300031962\|Ga0307479_10409622	All Organisms → cellular organisms → Bacteria → Acidobacteria	1340	Open in IMG/M
3300031962\|Ga0307479_10975358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	818	Open in IMG/M
3300032059\|Ga0318533_11230018	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032174\|Ga0307470_11324015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	591	Open in IMG/M
3300032180\|Ga0307471_100775315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.06%
Aquatic	Environmental → Aquatic	0.97%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.06%
Sediment	Environmental → Aquatic → Sediment	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.17%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	58.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010082	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_00716910	2199352024	Soil	VTGATHEKGKQKGKAYEHYGRFTDTWIKHDSQWICVSSQLGLLHK
INPhiseqgaiiFebDRAFT_1048657431	3300000364	Soil	QNGKPFAHNGRSTDTWIKKDGRWVCVASHLGVISK*
JGI12053J15887_102668171	3300001661	Forest Soil	KGTFKGKPYQHQGRFTDTWMKKNGQWLCIASHLGVVSK*
JGI25617J43924_101020971	3300002914	Grasslands Soil	GATHEKGTEKGKPFSHVGRFTDTWIKKDGQWLCIASQLSLIGK*
Ga0070710_100987521	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	HEKGKQRGKTYEHYGRFTDTWIRHNREWICVASHLGLLQK*
Ga0070730_103569211	3300005537	Surface Soil	ATHERGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALMPKSL*
Ga0066691_107951032	3300005586	Soil	KGKPYAHQGRFTDTWIKKDSQWLCFASQLSLIGK*
Ga0075436_1001595293	3300006914	Populus Rhizosphere	VYHEKGTLNGKPYYHHGRFTDTWIKEGSAWLCAASQSTLIQK*
Ga0099793_102675621	3300007258	Vadose Zone Soil	TEKGKPYAHQGRFTDTWIKKDGQWLCVASQLSLISSK*
Ga0099795_100778371	3300007788	Vadose Zone Soil	TVVVIGATHEKGTAKGKPYEHYGRFTDTWIKRDAQWLCVASQLALIPKSL*
Ga0104322_1426911	3300007819	Permafrost Soil	VTGATHEKGTNKGKHYEHRGRFTDTWILKNGEWLCVASHLGLLSK*
Ga0099829_104255342	3300009038	Vadose Zone Soil	LKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL*
Ga0099830_104138721	3300009088	Vadose Zone Soil	IGATHEKGALKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL*
Ga0099830_117631851	3300009088	Vadose Zone Soil	TLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL*
Ga0099828_113227752	3300009089	Vadose Zone Soil	GTEKGKPFSHQGRFTDTWIKKDGQWLCIASQLSLISK*
Ga0126373_113857682	3300010048	Tropical Forest Soil	VVVTGATHEKGTLKGKPYEHYGRFTDTWIKQNGEWICVASQLGLLRSVG*
Ga0127469_1413151	3300010082	Grasslands Soil	VTGATREKGTEKGKPYAHQGRFTETWIKKDRQWLCVASQPSLIGK*
Ga0099796_101339321	3300010159	Vadose Zone Soil	THEKGTAKGKPYEHYGRFTDTWIKRDTQWLCVASQLALIPKSL*
Ga0134062_104705501	3300010337	Grasslands Soil	KGTEKGKPFSHHGRFTDTWIKKDGQWLCIASQLSLIGK*
Ga0126372_114855041	3300010360	Tropical Forest Soil	LKGKAYQHQGRFTDTWIKKNGQWLCVASQLSSVGK*
Ga0126377_121716041	3300010362	Tropical Forest Soil	KGTQNGKPFAHTGRFTDTWIKKNGTWLCVASHLGVVSK*
Ga0137392_103802501	3300011269	Vadose Zone Soil	YEHHGRFTDTWIKRDYRWLCIASQLAQIPVIRGG*
Ga0137392_114555222	3300011269	Vadose Zone Soil	VIGATHEKGAAKGKPYEHYGRFTDTWIKRDSQWLCIASQLSLVPKSL*
Ga0137391_104331303	3300011270	Vadose Zone Soil	GDTVIVIGATHEKGALRSKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL*
Ga0137391_112438602	3300011270	Vadose Zone Soil	GKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL*
Ga0137393_104609411	3300011271	Vadose Zone Soil	IVIGSTREKGTEKGKPFSHLGRFTDTWNKKDGQWLCIASQLSLIGK*
Ga0137388_104135141	3300012189	Vadose Zone Soil	ATHERGTLRGKPYEHYGRFTDTWIKHDAQWLCIASQLALIPKPL*
Ga0137388_118090351	3300012189	Vadose Zone Soil	GSTHEKGTEKGKPFVHRGRFTDTWIKKDGQWLCVASQLSLLNK*
Ga0137388_118123131	3300012189	Vadose Zone Soil	TVVVIGATHEKGALKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL*
Ga0137364_103570531	3300012198	Vadose Zone Soil	VVTGATREKGTEKGKPYAHQGRFTDTWTKKDGQWLCVAVS*
Ga0137382_104155892	3300012200	Vadose Zone Soil	MELHRHGDTVAVTGATREKGTEKGKPYAHQGRFTETWIKKDRQWLCVASQPSLIGK*
Ga0137363_105515552	3300012202	Vadose Zone Soil	THEKGTLKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL*
Ga0137399_103441121	3300012203	Vadose Zone Soil	KGKPYEHYGRFTDTWIKRDAQWLCVASQLALIPKSL*
Ga0137399_103703941	3300012203	Vadose Zone Soil	THEKGTAKGKPYEHYGRFTDTWIKREAQWLCVASQLALIPKSL*
Ga0137376_112659722	3300012208	Vadose Zone Soil	GATREKGTEKGKPYAHQGRFTETWIKKDRQWLCVASQPSLIGK*
Ga0137360_102390072	3300012361	Vadose Zone Soil	GATHEKGTAKGKPYEHHGRFTDTWIKRDAQWLCIASQLSLIPKSL*
Ga0137361_102285571	3300012362	Vadose Zone Soil	GTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL*
Ga0137358_102203662	3300012582	Vadose Zone Soil	VIGATHEKGTAKGKPYEHYGRFTDTWIKRDAQWLCVASQLALIPKSL*
Ga0137397_112475781	3300012685	Vadose Zone Soil	IIIGATHEKGTAKGKPYEHYGRFTDTWIKRDDRWLCIASQLALIPKSV*
Ga0137395_105189271	3300012917	Vadose Zone Soil	ATHEKGTAKGKPYEHYGRFTDTWIKRDAQWLCIASQLSLIPKSL*
Ga0137396_106522732	3300012918	Vadose Zone Soil	VTGATREKGTEKGKPYAHQGRFTDTWIKKDGQWLCVASQLSLISSK*
Ga0137396_111372402	3300012918	Vadose Zone Soil	GTEQGTPYAHQGRFTATSIKKDGQWLCVASQLSLTSSK*
Ga0137359_112303181	3300012923	Vadose Zone Soil	ATHEKGTAKGKPYEHYGRFTDTWIKREPQWLCVASQLALIPKSL*
Ga0137413_106155011	3300012924	Vadose Zone Soil	GTEKGKPFSHLGRFTDTWIKKDGQWLCIASQLSLIGK*
Ga0137413_113823101	3300012924	Vadose Zone Soil	EKGTAKGKPYEHHGRFTDTWIKRDDRWLCVASQLALIPKSL*
Ga0137419_100541311	3300012925	Vadose Zone Soil	KGKPFSHLGRFTDTWIKKDGQWLCIASQLSLIGK*
Ga0137419_106232901	3300012925	Vadose Zone Soil	EKGTAKGKPYAHQGRFTDTWIKKDGQWLCVASQLSLIGK*
Ga0137419_119624771	3300012925	Vadose Zone Soil	EKGTFKGKPYQHQGRFTDTWIKKNGQWLCIASHLGVVSK*
Ga0137416_104755741	3300012927	Vadose Zone Soil	TVVVTGATREKGTEKGKPYAHQGRFTDTWIKKDSQWLCVASQLSLINK*
Ga0137416_122470032	3300012927	Vadose Zone Soil	IGATHEKGTAKGRPYEHHGRFTDTWIKRDAQWLCIASQLALIPKSL*
Ga0137404_113103441	3300012929	Vadose Zone Soil	GKPYEHYGRFTDTWIKREAQWLCVASQLALIPKSL*
Ga0137410_113485962	3300012944	Vadose Zone Soil	KGTFKGKPYQHQGRFTDTWMKKNGQWLCIASHLGVISKPA*
Ga0137405_13931165	3300015053	Vadose Zone Soil	MKLHRHGDTVVVIGATHEKGTFKGKPYQHQGGFTDTWMKKNGQWLCIASHLGVTSK*
Ga0137420_12330362	3300015054	Vadose Zone Soil	KGTEKGKSFSHVGRFTDTWIKKDGKWLCIASQLSLIGK*
Ga0137412_102579161	3300015242	Vadose Zone Soil	HEKGTAKGKPYEHYGRFTDTWIKRDAQWLCVASQLALIPKSL*
Ga0137412_102596831	3300015242	Vadose Zone Soil	HEKGTAKGKPYEHYGRFTDTWIKRDTQWLCVASQLALIPKSV*
Ga0179590_10052124	3300020140	Vadose Zone Soil	TVVVIGATHEKGTAKGKPYEHHGRFTDTWIKRDDRWLCVASQLALTPKSV
Ga0179590_11423712	3300020140	Vadose Zone Soil	KGTAKGKPYEHYGRFTDTWIKREAQWLCVASQLALIPKSL
Ga0179594_103476262	3300020170	Vadose Zone Soil	GTAKGKPYAHQGRFTDTWIKKDGQWLCVASQLSLIGK
Ga0179592_100573003	3300020199	Vadose Zone Soil	KGTAKGKPYEHYGRFTDTWIKRDAQWLCVASQLALIPKSL
Ga0179592_102364502	3300020199	Vadose Zone Soil	STHEKGTEKGKPFSHAGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0179592_102957282	3300020199	Vadose Zone Soil	VVVIGATHEKGTLKGKQYQHNGRFTDTWIKRDNQWLCIASQLSLIPKSL
Ga0179592_103076672	3300020199	Vadose Zone Soil	ATHEKGTAKGKPYEHYGRFTDTWIKRDTQWLCVASQLALIPKSL
Ga0210404_100046791	3300021088	Soil	KGKPYEHHGRFTDTWIKHDSQWLCVASQLSLIPKSL
Ga0210404_103495741	3300021088	Soil	KGILKGKPYEHHGRFTDTWIKHDSQWLCVASQLSLIPKSL
Ga0210408_101056021	3300021178	Soil	VGATHEKGTAKGKPYEHHGRFTDTWIKRDYRWLCIASQLSLIPKSQ
Ga0210408_106589511	3300021178	Soil	KGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0210383_104153001	3300021407	Soil	HEKGTEKGKAFSHSGRFTDTWIKKDGQWLCVASQLSLLGK
Ga0210394_117236561	3300021420	Soil	VIGATREKGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0210384_102680311	3300021432	Soil	EKGTLKGKPYEHHGRFTDTWTKHDGQWLCIASHLSLIPKT
Ga0210409_104833671	3300021559	Soil	TREKGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0179589_101854453	3300024288	Vadose Zone Soil	HEKGTAKGKPYEHYGRFTDTWIKRDTQWLCVASQLALIPKSL
Ga0209802_12252311	3300026328	Soil	TREKGTEKGKPFSHLGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0209803_12565201	3300026332	Soil	TVVVIGATHEKGTEKGKPFSHHGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0209157_11432042	3300026537	Soil	TVIVIGSTREKGTEKGKPFSHLGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0209648_101091953	3300026551	Grasslands Soil	EKGTEKGKLFSHLGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0209648_101179561	3300026551	Grasslands Soil	IGATHEKGTLKGKPYEHNGRFTDTWIKRDYRWLCVASQLAIIPKSL
Ga0209648_101816303	3300026551	Grasslands Soil	VVVTGATREKGTENGKPYAHQGRFTDTWIKKDGQWLCVASQLRLIGK
Ga0209076_10753332	3300027643	Vadose Zone Soil	EKGTEKGKPFSHLGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0209388_10989002	3300027655	Vadose Zone Soil	VIVIGSTREKGTEKGKPFSHLGRFTDTWIKKDGQWLCIASQLSLIGK
Ga0209736_12066661	3300027660	Forest Soil	LKGKPYEHHGRFTDTWIRRDYRWLCIASQLALIPKSL
Ga0209180_101016771	3300027846	Vadose Zone Soil	GATHEKGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0209180_104599651	3300027846	Vadose Zone Soil	VIVIGATHEKGTLKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL
Ga0209180_107685142	3300027846	Vadose Zone Soil	VVVTGATHEKGALKGKAYEHYGRFTDTWIKRDGQWICVASQLGLLQK
Ga0209701_102155921	3300027862	Vadose Zone Soil	THEKGALKGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL
Ga0209283_101312101	3300027875	Vadose Zone Soil	ATREKGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0209283_108101121	3300027875	Vadose Zone Soil	KGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKSL
Ga0209488_101142121	3300027903	Vadose Zone Soil	VVVIGATHEKGTAKGKPYEHYGRFTDTWIKRDDRWLCVASQLALIPKSV
Ga0209488_102243001	3300027903	Vadose Zone Soil	VVVIGATHEKGTAKGKPYEHYGRFTDTWIKRDAQWLCVASQLALIPKSL
Ga0209583_107832631	3300027910	Watersheds	DTVVVTGATHEKGKQIGKTYEHYGRFTDTWIRRNSEWICVASHLGLLQK
Ga0209526_104601153	3300028047	Forest Soil	TLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0170824_1204035501	3300031231	Forest Soil	HEKGKQKGKAYEHYGRFTDTWIKHDSEWICVASHLGLLHN
Ga0307474_104457381	3300031718	Hardwood Forest Soil	HEKGKQKGKTYEHYGRFTDTWMRRNNEWICVASQLGLLPK
Ga0307469_103801971	3300031720	Hardwood Forest Soil	KGTLRGKPYEHHGRFTDTWIKRDYRWLCVASQLALIPKPL
Ga0307469_104227411	3300031720	Hardwood Forest Soil	TFKGKPYQHQGRFTDTWMKKNGQWLCIASHLSAISKPA
Ga0307475_100905154	3300031754	Hardwood Forest Soil	REKGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKTL
Ga0307475_104870863	3300031754	Hardwood Forest Soil	VIVIGATHEKGTLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL
Ga0307479_101061621	3300031962	Hardwood Forest Soil	KGTLKGKTYQHKGRFTDTWIRQDGRWICVASQLALLSN
Ga0307479_104096221	3300031962	Hardwood Forest Soil	IGATHEKGTENGKAFSHHGRFTDTWIKKDGQWLCIASQLSLVGK
Ga0307479_109753582	3300031962	Hardwood Forest Soil	TLKGKPYEHHGRFTDTWIKRDYRWLCIASQLALIPKTL
Ga0318533_112300181	3300032059	Soil	VVTGATHEKGKQRGKTYEHYGRFTDTWVKQNGAWICVASQLGLLQK
Ga0307470_113240152	3300032174	Hardwood Forest Soil	ATHEKGTFKGKPYQHQGRFTDTWIKKNGQCLCVASHLSAISKPA
Ga0307471_1007753151	3300032180	Hardwood Forest Soil	LKGKRYEHHGRFTDTWIKRDYRWLCIASQLALIPKSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098780

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences