Metagenome / Metatranscriptome Family F098699

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098699
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	60 residues
Representative Sequence	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD
Number of Associated Samples	31
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	50.98 %
% of genes near scaffold ends (potentially truncated)	30.10 %
% of genes from short scaffolds (< 2000 bps)	86.41 %
Associated GOLD sequencing projects	31
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Eukaryota (54.369 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (40.777 % of family members)
Environment Ontology (ENVO)	Unclassified (40.777 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.602 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1JGI24768J34885_100482963 2Ga0071350_12292692 3Ga0102853_10221232 4Ga0102856_10639452 5Ga0102856_10801172 6Ga0102852_10931861 7Ga0102852_11160741 8Ga0105735_10824062 9Ga0105735_11115802 10Ga0105735_11414252 11Ga0105735_11616891 12Ga0105736_10651302 13Ga0105736_11217641 14Ga0114348_11092031 15Ga0114348_11389712 16Ga0114359_10763492 17Ga0114359_11749792 18Ga0114349_10037773 19Ga0114349_10178367 20Ga0114349_10229314 21Ga0114349_10522462 22Ga0114349_10639082 23Ga0114349_10771194 24Ga0114349_10791374 25Ga0114349_10847992 26Ga0114349_10977421 27Ga0114349_11037242 28Ga0114349_11206212 29Ga0114349_11844082 30Ga0114349_12411231 31Ga0114349_12506752 32Ga0114349_12863562 33Ga0114353_10962061 34Ga0114361_10206884 35Ga0114361_10216502 36Ga0114361_10222501 37Ga0114361_10302202 38Ga0114361_10357604 39Ga0114361_10408473 40Ga0114361_10463622 41Ga0114361_10525832 42Ga0114361_10547613 43Ga0114361_10548842 44Ga0114361_10571563 45Ga0114361_10759621 46Ga0114361_10780281 47Ga0114361_10844401 48Ga0114361_10889802 49Ga0114361_10893193 50Ga0114361_11185672 51Ga0114361_11205131 52Ga0114361_11293022 53Ga0114361_11752602 54Ga0114361_11858271 55Ga0114361_12641612 56Ga0129318_100793271 57Ga0129318_102503961 58Ga0207193_11926492 59Ga0207193_12536431 60Ga0207193_18699211 61Ga0208718_10601601 62Ga0214162_10135223 63Ga0214162_10287111 64Ga0214162_10664141 65Ga0210301_10055132 66Ga0210301_12429852 67Ga0210301_13188151 68Ga0210298_11899311 69Ga0210298_12830462 70Ga0210297_10500502 71Ga0208020_10629592 72Ga0315905_113013881 73Ga0334989_0005595_3747_3929 74Ga0334989_0008606_3191_3373 75Ga0334989_0021470_996_1178 76Ga0334989_0033609_1850_2017 77Ga0334989_0054706_927_1109 78Ga0334989_0107321_946_1128 79Ga0334989_0113796_703_885 80Ga0334989_0160429_435_617 81Ga0334989_0310520_66_248 82Ga0334998_0344858_624_806 83Ga0335005_0265317_220_402 84Ga0335005_0705690_44_226 85Ga0335021_0021199_13_216 86Ga0335021_0163045_1025_1207 87Ga0335001_0169622_363_527 88Ga0335001_0321040_551_748 89Ga0335001_0404479_84_281 90Ga0335001_0435918_493_690 91Ga0335001_0470732_344_508 92Ga0335001_0727727_26_208 93Ga0335001_0755610_34_231 94Ga0335001_0763266_150_329 95Ga0334990_0133899_20_202 96Ga0335035_0084836_1750_1932 97Ga0335037_0657862_33_215 98Ga0335017_0153752_479_661 99Ga0335017_0154166_1092_1274 100Ga0335017_0327599_641_808 101Ga0335017_0389524_1_144 102Ga0335017_0459350_2_175 103Ga0335061_0642526_303_485
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1JGI24768J34885_100482963 2Ga0102853_10221232 3Ga0102852_10931861 4Ga0105735_11115802 5Ga0105736_11217641 6Ga0114349_10178367 7Ga0114361_10759621 8Ga0207193_11926492 9Ga0210298_11899311 10Ga0335001_0169622_363_527 11Ga0335001_0321040_551_748 12Ga0335001_0755610_34_231
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0334989_0310520_66_248 2Ga0102852_10931861 3Ga0105735_11115802 4Ga0105735_11414252 5Ga0105735_11616891 6Ga0105736_10651302 7Ga0114348_11092031 8Ga0114349_10178367 9Ga0114349_10639082 10Ga0114349_10771194 11Ga0114349_11037242 12Ga0114349_11206212 13Ga0114349_12506752 14Ga0114361_10216502 15Ga0114361_10222501 16Ga0114361_10893193 17Ga0207193_11926492 18Ga0210298_11899311 19Ga0208020_10629592 20Ga0315905_113013881 21Ga0334989_0005595_3747_3929 22Ga0334989_0021470_996_1178 23Ga0334989_0107321_946_1128 24Ga0334998_0344858_624_806 25Ga0335001_0169622_363_527 26Ga0335001_0321040_551_748 27Ga0335001_0404479_84_281 28Ga0335001_0435918_493_690 29Ga0335001_0470732_344_508 30Ga0335001_0727727_26_208 31Ga0335001_0755610_34_231
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.86% β-sheet: 0.00% Coil/Unstructured: 51.14%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07727	RVT_2	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	54.37 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Skeletonemataceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae	51.46 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	2.91 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Skeletonema	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema	51.46 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	2.91 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Skeletonema marinoi-dohrnii complex	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex	51.46 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2.91 %
Unclassified	root	N/A	45.63 %

Name	Rank	Taxonomy	Distribution
Skeletonema marinoi	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	51.46 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2.91 %
Unclassified	root	N/A	45.63 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002447\|JGI24768J34885_10048296	Not Available	1415	Open in IMG/M
3300005069\|Ga0071350_1229269	Not Available	642	Open in IMG/M
3300007543\|Ga0102853_1022123	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	1048	Open in IMG/M
3300007636\|Ga0102856_1063945	Not Available	593	Open in IMG/M
3300007636\|Ga0102856_1080117	Not Available	539	Open in IMG/M
3300007718\|Ga0102852_1093186	Not Available	592	Open in IMG/M
3300007718\|Ga0102852_1116074	Not Available	537	Open in IMG/M
3300007860\|Ga0105735_1082406	Not Available	666	Open in IMG/M
3300007860\|Ga0105735_1111580	Not Available	585	Open in IMG/M
3300007860\|Ga0105735_1141425	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	531	Open in IMG/M

Showing 1 to 10 of 102 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	80.58%
Marine	Environmental → Aquatic → Marine	19.42%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	7.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.65%
Lake	Environmental → Aquatic → Freshwater → Lake	73.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.88%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	11.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	70.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.77%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	11.65%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	5.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	30.10%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.97%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.97%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	2.91%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.94%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	40.78%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300005069	Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008122	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTR	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M

Showing 1 to 10 of 31 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_100482963	3300002447	Freshwater And Sediment	KKRLRWMGDSFRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDEIAGEEEDMGVYHDDMD*
Ga0071350_12292692	3300005069	Freshwater	KRLRWMGDSFRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD*
Ga0102853_10221232	3300007543	Estuarine	MYLRDKHVIQDQHQEALWASSEEVMDLVSALPANILRLSIMSNETAGEEEDSMGVYHDDMD*
Ga0102856_10639452	3300007636	Estuarine	VIQDQHREALRASSEEVMDLVLALPADILRLSIMSDETAGEEKDMGVYHDDMD*
Ga0102856_10801172	3300007636	Estuarine	DTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD*
Ga0102852_10931861	3300007718	Estuarine	THVIQDQNREAVRASSEEVMDLVSALPDDILRLSIRSEETAGEEGDMGVYQDDMD*
Ga0102852_11160741	3300007718	Estuarine	DSFRMYLRDTQVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDEIAGEEEDMGVYHDDMD*
Ga0105735_10824062	3300007860	Estuary Water	MYLRDMHVIQDQHREALRASSEEVMNLVSALPANILRLSTMSDGTADDEEDMGVYQDEMD
Ga0105735_11115802	3300007860	Estuary Water	MYLHDTHVIQDQHREALWASFEEVVDLVSALPADILCLSIMSEGTAGDEEDMGVYQDEMDETAILLK*
Ga0105735_11414252	3300007860	Estuary Water	MYLRDTHVIQDQHLMALRASSKEVMDLVSALPANILCLSIMSEETAGEEEDMGVYQDDMD
Ga0105735_11616891	3300007860	Estuary Water	KRLRWMGDSFRMYLRDTHVIQDQHQEALRASSEEVLDLVSALPADILWCLSTMSDGTADDEEDMGVYQDDMD*
Ga0105736_10651302	3300007861	Estuary Water	MYLHDTHVIQDQHREALQASSKEVMDLVSALPANILCLNIMSEETAGEEEDMGVYQDDLD
Ga0105736_11217641	3300007861	Estuary Water	QDQHREALRASSAEVMDLVSALPADILRLSTMSEETAGDDDDMGVYHDDMD*
Ga0114348_11092031	3300008115	Freshwater, Plankton	MYLHDTHVIQDQHRKALWASSEEVMDLVRTLPADILRLSIMSEETAGEEEDMGVYQDDMD
Ga0114348_11389712	3300008115	Freshwater, Plankton	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVHQDDMD
Ga0114359_10763492	3300008122	Freshwater, Plankton	MYLRDTHVIQDQHHEALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD
Ga0114359_11749792	3300008122	Freshwater, Plankton	MYLRDTHIIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD
Ga0114349_10037773	3300008263	Freshwater, Plankton	MLDSFRMYLRDTHVIQDQHREALRSSSEEVMDLVSALPANILRLSIMSEETAGEEEDMRVYQDEMD*
Ga0114349_10178367	3300008263	Freshwater, Plankton	MGDSFRKFLCGTHVIQDQHREALWASFKESALPADILCLSIMSKKTAGEEEDMGVYQDDMD*
Ga0114349_10229314	3300008263	Freshwater, Plankton	MGDFFRMYLRNTHVIQDQHREALRASSEEVMDLVSALPANILRLSIMSEETAGEEEDMGIYQDDMD*
Ga0114349_10522462	3300008263	Freshwater, Plankton	MYLCDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD
Ga0114349_10639082	3300008263	Freshwater, Plankton	MYFRDTHVIQDQHGEALGASSEEAMDLVSALPADILCLSIMSEETAGEEENMGVYQDEMD
Ga0114349_10771194	3300008263	Freshwater, Plankton	MYLHDTHVIQDQHREALQASSKEVMDLVSTLPADILHLSIMSEGTAGDEDDMGVYQDEMD
Ga0114349_10791374	3300008263	Freshwater, Plankton	VIQDQHCEALWASSEEVMDLVSALPADILCLSIMSEEIAGEEEDMGVYQDDMD*
Ga0114349_10847992	3300008263	Freshwater, Plankton	MYLRDTHIIQDRHCEALRASSEEVMDLVSALPADIFRLSIMSDETAGEEEDSMGVYHDDMD*
Ga0114349_10977421	3300008263	Freshwater, Plankton	MYLRDTHVIQDQHCEALRASSEEVMDLVSALPADILCLSIMSEETAGEEEDMGVYHDDMD
Ga0114349_11037242	3300008263	Freshwater, Plankton	MYLRDTHIIQDQHCKALRASSEEVINLVSALPADILRLSIMSEETAGGEEDMGVYQDNMD
Ga0114349_11206212	3300008263	Freshwater, Plankton	MHVIQDQHHEALRVSSEEVMDLVSALPANILRLSIMSDETAGKEEDMGVYHDDMD*
Ga0114349_11844082	3300008263	Freshwater, Plankton	MYLRDTHVIQDHHCEALRASSEEVMDLFSALPADILRLSIMSEETAGEEEDMGVYHDDMD
Ga0114349_12411231	3300008263	Freshwater, Plankton	IKKRLRWMGDSFRMYLRDTHVIQDQHHEALRASSEEVIDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD*
Ga0114349_12506752	3300008263	Freshwater, Plankton	MYLRDTHVIQDQHCKALRASSKEVMDLVSAIPADIRLSIMSEETAGEEEDMGVYQDVMD*
Ga0114349_12863562	3300008263	Freshwater, Plankton	QDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGKEEDMGVYQDDMD*
Ga0114353_10962061	3300008264	Freshwater, Plankton	IKKRLRWMGDSFRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD*
Ga0114361_10206884	3300008265	Freshwater, Plankton	MYLCDTYVIQDQHREALRPSSEEVMDLVSALPADILCLSIMSEETAGEEEDMGVYQDDMD
Ga0114361_10216502	3300008265	Freshwater, Plankton	MHVIQDQHYEALQASSEEVMDLVSALPADILHLSIMSEETAGEEVDMGVYQDEID*
Ga0114361_10222501	3300008265	Freshwater, Plankton	MGDSFRMHLRDTHVIQDQHREALRASSEEVMDLVSALPADILHLSIMSEGTTSDENDMGVYQDDMD*
Ga0114361_10302202	3300008265	Freshwater, Plankton	MGDSFRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGKEEDMGVYQDDMD*
Ga0114361_10357604	3300008265	Freshwater, Plankton	RMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD*
Ga0114361_10408473	3300008265	Freshwater, Plankton	MGDSFQMYLHDTHVIQDQHREALRASSEEVTDLVSALPADILRLSIMSEETAGEEEDMGVYQDEMD*
Ga0114361_10463622	3300008265	Freshwater, Plankton	MYLRDTHVIQDQHCKALRASSEEVMDLVSALPADILSLSIMSEETDGEEEDMGVYHDDMD
Ga0114361_10525832	3300008265	Freshwater, Plankton	MYLRDTHVIQDQHCEALWASSEEVMDLVSALPANILRLSIMSEETAGEEEDMGVYQDDMD
Ga0114361_10547613	3300008265	Freshwater, Plankton	MYLHDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD
Ga0114361_10548842	3300008265	Freshwater, Plankton	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILHLSIMSKETAGDDDDMGVYHDDMD
Ga0114361_10571563	3300008265	Freshwater, Plankton	MYLRDTHVIQDHHCEALRASSEEVMDLVSALPADIICLSIMSEETAGEEEDMGVYHDDMD
Ga0114361_10759621	3300008265	Freshwater, Plankton	MYLRDTHVIQDQHCEALRASSEEVMDLVSALPADILRLSIMSEETAGEE
Ga0114361_10780281	3300008265	Freshwater, Plankton	MYLCDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYQDEMD
Ga0114361_10844401	3300008265	Freshwater, Plankton	REALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD*
Ga0114361_10889802	3300008265	Freshwater, Plankton	MYLRDLHVIQDQHREALRVSSEEVMDLVSALPADILRLSIMSKETAGEEEDSMGVYHDDMD*
Ga0114361_10893193	3300008265	Freshwater, Plankton	MYLCDTQIIQDQHCEALRASSEEVMDLVSALPADILRLSIMSKGTAGDEKDMGVYQDDMD
Ga0114361_11185672	3300008265	Freshwater, Plankton	RMYLRDTHVIQDQHREALRASSEEVMDLVSALPADIVHLSIMSDETAGEEEDMGVYHDDMD*
Ga0114361_11205131	3300008265	Freshwater, Plankton	MGDSFRMYLRDTHVIQNQHREALRASSEEVMDLVSALPANILRLSIMSEETAGEEEDMGVYQDDID*
Ga0114361_11293022	3300008265	Freshwater, Plankton	MGDSFLMYLRDTHIIQDQHHEALRASSKEVMDLVSTLPADILRLSIMSEETAGEEEDMGAYHDDMD*
Ga0114361_11752602	3300008265	Freshwater, Plankton	LRWMGDSFRMYLRDTHVIQDQHREALRASSEEVMDLVSTLPADILRLSIMSDETAGEEEDMGVYHDDMD*
Ga0114361_11858271	3300008265	Freshwater, Plankton	KKRLRWMGDSFRMYLRDTHVIQDQHREALRASSEEVMNLVSALPADILRLSIMSEETAGEEEDIGVYHDDMD*
Ga0114361_12641612	3300008265	Freshwater, Plankton	FRMYLRDTHVIQDQHREALRASSEEVMDLVSALPAEILCLSIMSEETSGKEEDMGVYQDDMD*
Ga0129318_100793271	3300011009	Freshwater To Marine Saline Gradient	MYLRDTHVIQDQHREALRASSKEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD
Ga0129318_102503961	3300011009	Freshwater To Marine Saline Gradient	MYLRDTHVIQDQHREALRASSEEVMDFVSALPADILRLSIMSEETAGEEEDMGVYQDDMD
Ga0207193_11926492	3300020048	Freshwater Lake Sediment	MYLRDTHAIQNKHRKALRASSEEVMDLVSALPADILHLSIMLEGTAGDEDDMGVYQDDMD
Ga0207193_12536431	3300020048	Freshwater Lake Sediment	MYLRDTHVIQDQHREALRASSEEVMDLVSALHADILRLSIMSEGTVGDEEDMGVYHDDMD
Ga0207193_18699211	3300020048	Freshwater Lake Sediment	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGDDEDMGVYQDDMD
Ga0208718_10601601	3300020565	Freshwater	HREALRASSEEVMDLVSALPADILRLSIMSDEIAGEEEDMGVYHDDMD
Ga0214162_10135223	3300021108	Freshwater	FRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD
Ga0214162_10287111	3300021108	Freshwater	KKRLRWMGDSFRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMGVYHDDMD
Ga0214162_10664141	3300021108	Freshwater	FRMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEGIAGEEEDMGVYQDDMD
Ga0210301_10055132	3300021325	Estuarine	RMYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEKDMGVYHDDM
Ga0210301_12429852	3300021325	Estuarine	MYLRDTRVIQDQHREALRASSEEVMDLVSTLPADILRLSIMSEETAGEEEDMGVYHDEMD
Ga0210301_13188151	3300021325	Estuarine	HVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGKEEDMGVYHDDMD
Ga0210298_11899311	3300021328	Estuarine	MYLRDTHVIQDEHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEEDMAQTVHETHTRISQ
Ga0210298_12830462	3300021328	Estuarine	DQHREALRASSEEVMDIVGALPGDILRLSTMSDGTAAGDGDDMGVYHDDMD
Ga0210297_10500502	3300021845	Estuarine	DQHREALRASSEEVMDIVGALPVDILRLSTMSDGTAAGDGDDMGVYHDDMD
Ga0208020_10629592	3300027159	Estuarine	LRWMGDSFRMYLRDTRVIQDQHREALRASSEEVMDIVGALPGDILCLSTMSDGTAAGDGDDMGVYHDDMD
Ga0315905_113013881	3300032092	Freshwater	MYLRDMHDIQDQHREALRASSEEVMDLISALPANILRLSTMSDGTADDEEDMGVYHDEMD
Ga0334989_0005595_3747_3929	3300033984	Freshwater	MYLRDTLIIQEQHRKALRASLEEVMDLVSTLPADILRLSIMSEGTAGDEEDMGVYQDGMD
Ga0334989_0008606_3191_3373	3300033984	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDTD
Ga0334989_0021470_996_1178	3300033984	Freshwater	MYLRDTHVIQDQHREALRASSEEVTDLVSALPADILHLSIMSEGSAGDEEDMGVYQDDMD
Ga0334989_0033609_1850_2017	3300033984	Freshwater	MHVIQDQHREALRASSEEVMDLVSALPADILCLSIMSEETADEEEDMGVYLDDMD
Ga0334989_0054706_927_1109	3300033984	Freshwater	MYLRDTYDIQDQHREALRASSEEVMDLVSALPADILRLSIMSKETAGEEEDMGVFHDDMD
Ga0334989_0107321_946_1128	3300033984	Freshwater	MYLRDKYDIQDQHREALRASSEEVMDLVSALPADILHLSIMSKETAGEEEDMGVFHDDMD
Ga0334989_0113796_703_885	3300033984	Freshwater	MYLRDTHVIQDQHRKALRASSEEVMDLVSALPADILRLSIMSKETAGEEEDMGVYQDDMD
Ga0334989_0160429_435_617	3300033984	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEGTAGDEEDMGVYHDDMD
Ga0334989_0310520_66_248	3300033984	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD
Ga0334998_0344858_624_806	3300034019	Freshwater	MYLRDTRVIQDQHGKALRASSEEVMDIVGALPDDILRLSTISDGTAGNEDDMGVYHDDMD
Ga0335005_0265317_220_402	3300034022	Freshwater	MYLRDTYDIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVFHDDMD
Ga0335005_0705690_44_226	3300034022	Freshwater	MYLRDTHVIQDQHREALQASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYQDDMD
Ga0335021_0021199_13_216	3300034023	Freshwater	MGDSFRMYLRDTRVIQDQHREALRASSEEVMDIVGALPVDILRLSTMSDGTAAGDGDDMGVYHDDMD
Ga0335021_0163045_1025_1207	3300034023	Freshwater	MYLRDTRVIQDQHREALRASSEEVMDIVGALPDDILRLSTMSDGTAGDEDDMGVYHDDMD
Ga0335001_0169622_363_527	3300034064	Freshwater	MQIIQDQQCEALQASSKEVMDLIDALPAKIICLSSMSNGAGDADNMGVYHDNMD
Ga0335001_0321040_551_748	3300034064	Freshwater	MGDSFRMYLRDTCVIQDQHRKALRASSKEVMDLISVLPAGILHLSTMSEGTGDKDNMGVTHDDMD
Ga0335001_0404479_84_281	3300034064	Freshwater	MGDSFRMYLRDMHVIQDQHCKALWALSEEVMDLMSVLPDNILHLSTMSKGTGDKDDMGVYHDDMD
Ga0335001_0435918_493_690	3300034064	Freshwater	MGNSFWMYLRDTHVIQDQHRKALQASSEEVMDLISTLPAKILRLSTMSEGTGDEHDMGVYHDDMD
Ga0335001_0470732_344_508	3300034064	Freshwater	MLIIQDQHCEALRASSKEVMDLISVLPADILCLSTMSEGTGDKDNMGVYHDDMD
Ga0335001_0727727_26_208	3300034064	Freshwater	MYLRDTRVIQDQQHREALQASSKEVMDLISALPADILCLSTMSEGAGDEDNMGVYHDDMD
Ga0335001_0755610_34_231	3300034064	Freshwater	MGSSFWMYLRDTRVIQDQHHEALRALSEEVMDLVSALPDDILCLSIMSDGTGYEDNMGFYHGDMD
Ga0335001_0763266_150_329	3300034064	Freshwater	MYLRDTRVIQDQHRKALRASSEEVMDLISALPADILCLSTMSEGTGDKDDMGVYHDDMD
Ga0334990_0133899_20_202	3300034068	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEGTAGEEEDMGAYHDDMD
Ga0335035_0084836_1750_1932	3300034105	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSDETAGEEKDMGVYHDDMD
Ga0335037_0657862_33_215	3300034107	Freshwater	MYLRDTKVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVYHDDMD
Ga0335017_0153752_479_661	3300034167	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGKEEDMGVYHDDMD
Ga0335017_0154166_1092_1274	3300034167	Freshwater	MYLRDTHVIQDQHREALRASSKEVMDLVSALPADILRLSIMSNGTAGEEEDMGVYHDDMD
Ga0335017_0327599_641_808	3300034167	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGEEEDMGVS
Ga0335017_0389524_1_144	3300034167	Freshwater	MYLRDKYDIQDQHREALRASSEEVMDLVSALPADILRLSIMSEETAGE
Ga0335017_0459350_2_175	3300034167	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEGTAGDEEDMGVYHDD
Ga0335061_0642526_303_485	3300034168	Freshwater	MYLRDTHVIQDQHREALRASSEEVMDLVSALPADILRLSIMSEGTAGEEEDMGVYHDDMD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters