NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098649

Metagenome / Metatranscriptome Family F098649

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098649
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 45 residues
Representative Sequence VNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINN
Number of Associated Samples 20
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 22.55 %
% of genes near scaffold ends (potentially truncated) 97.09 %
% of genes from short scaffolds (< 2000 bps) 87.38 %
Associated GOLD sequencing projects 20
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.078 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral
(91.262 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal corpus
(91.262 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64
1Ga0099809_101128611
2Ga0099809_101229591
3Ga0099809_101630242
4Ga0099809_101696253
5Ga0099809_101805342
6Ga0099809_101808252
7Ga0099808_10771571
8Ga0099808_11154101
9Ga0099808_16933011
10Ga0099803_10741052
11Ga0099803_11582192
12Ga0099803_11835552
13Ga0099803_15167121
14Ga0099805_10412401
15Ga0099805_11683723
16Ga0099805_11730411
17Ga0099805_12926221
18Ga0099805_12965441
19Ga0099805_13159012
20Ga0099805_17144513
21Ga0099802_10178271
22Ga0099802_11986051
23Ga0099801_10056751
24Ga0099801_12851461
25Ga0099806_10196341
26Ga0099806_10359171
27Ga0099806_10520773
28Ga0099806_10755931
29Ga0099806_10810531
30Ga0099806_11233531
31Ga0099806_12495851
32Ga0099806_15741361
33Ga0100406_10770071
34Ga0100406_11090912
35Ga0100406_11950922
36Ga0100406_12628211
37Ga0100406_13149132
38Ga0099807_10310481
39Ga0099807_10803651
40Ga0099807_11983991
41Ga0099807_12612932
42Ga0099804_10591701
43Ga0099804_11469201
44Ga0099804_11892053
45Ga0099804_12003341
46Ga0099804_12366042
47Ga0100405_10070281
48Ga0100405_10203912
49Ga0100405_10371393
50Ga0100405_10436701
51Ga0100405_10460861
52Ga0100405_10590161
53Ga0100405_11334322
54Ga0100404_10689453
55Ga0100404_12011641
56Ga0100404_12200466
57Ga0100404_12301841
58Ga0100404_12708131
59Ga0100404_15105621
60Ga0133903_10039551
61Ga0133900_10091001
62Ga0133900_10251591
63Ga0133900_10347312
64Ga0133900_10409851
65Ga0133900_10957851
66Ga0133900_11330081
67Ga0133900_11347241
68Ga0133905_10786321
69Ga0126338_100400843
70Ga0126338_100408551
71Ga0126338_100649071
72Ga0126338_100873852
73Ga0126338_100874542
74Ga0126338_100959481
75Ga0126338_100965001
76Ga0126338_101170702
77Ga0126338_101503241
78Ga0126338_102483591
79Ga0126338_103429091
80Ga0126339_100127785
81Ga0126339_100351461
82Ga0126339_100812181
83Ga0126339_101488461
84Ga0126339_102605261
85Ga0126339_106903741
86Ga0126342_104405301
87Ga0126343_100858043
88Ga0126341_10309531
89Ga0126341_10546721
90Ga0126341_10598861
91Ga0126341_10663231
92Ga0126341_10663711
93Ga0126341_10689941
94Ga0126341_10995971
95Ga0126341_11022591
96Ga0126341_11042221
97Ga0126341_11053471
98Ga0126341_11135821
99Ga0126341_11511121
100Ga0126341_11867981
101Ga0126341_11894311
102Ga0126341_11895611
103Ga0126341_12164281
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.33%    β-sheet: 0.00%    Coil/Unstructured: 41.67%
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51015202530354045VNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNSequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
35.9%64.1%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Host-Associated
Coral
8.7%91.3%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0099809_1011286113300008013CoralMNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNL
Ga0099809_1012295913300008013CoralLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0099809_1016302423300008013CoralNYNHGAIIRIYMGINKVFLLLNEHGDPTFLFQNLSSYNINNR*
Ga0099809_1016962533300008013CoralYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINN*
Ga0099809_1018053423300008013CoralNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNP*
Ga0099809_1018082523300008013CoralNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLRSYNINNQ*
Ga0099808_107715713300008035CoralMNLASNRDYNHGAIIRIYMGINKVLLLLNKHGDPSFLSQNLSSYNINNQ
Ga0099808_111541013300008035CoralVNLASNRDYNHSAIIRIYMGINKVLLLLNEHGDPSFLFQNLRSY*
Ga0099808_169330113300008035CoralVTLASNRDYNHGVIISIYMGINKVLLLLNEHGDPSFLFQN
Ga0099803_107410523300008037CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLRSYNINNP*
Ga0099803_115821923300008037CoralMNLANNRNYNHGAIIRIYMSINKVLLLLNVNEHGNPSFLFENFSSYDINNR*
Ga0099803_118355523300008037CoralASNRDYNHGLIIRIYMGINKVLLLLNEHGDPSFLFQNLSCSNMNNQ*
Ga0099803_151671213300008037CoralNLASNRDYNHGAIIRIYKGINKLLLLLNEHGDPSVLFQNLSSYNINNQ*
Ga0099805_104124013300008038CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDP*
Ga0099805_116837233300008038CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINN
Ga0099805_117304113300008038CoralGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNP*
Ga0099805_129262213300008038CoralGNVNLASNRDYNHSAIIRIYMGINKVLLLLNEHGDPSFLFQNLRSY*
Ga0099805_129654413300008038CoralGNVNLASNRNYNHGAIIRIYMGINKVFLLLNEHGDPTFLFQNLSSYNINNR*
Ga0099805_131590123300008038CoralVNLASNGNYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNIN
Ga0099805_171445133300008038CoralASNRNYNHGAIIRIYMGINKVLLLLNKHGDPSFLFQNLSSSNINNR*
Ga0099802_101782713300008039CoralLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNSSSYKINNQ*
Ga0099802_119860513300008039CoralMNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINN
Ga0099801_100567513300008040CoralSNRRNVNLASNRDHNHGAIIRIYMGINKVLLLLNEHGDPSFLFQF*
Ga0099801_128514613300008040CoralASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0099806_101963413300008041CoralNMNLASNRDYNHGAIIRIYMGINKVLLLLNKHGNPSFLSQNLSSYNINNQ*
Ga0099806_103591713300008041CoralNHDAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSHNINNQ*
Ga0099806_105207733300008041CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNKHGDPSFYFKI*
Ga0099806_107559313300008041CoralGNVNLASNRDYNRGAIIRIYMGINKVLLLLNKHGDPSFSFQNLSSYNINNQ*
Ga0099806_108105313300008041CoralGNVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLF*
Ga0099806_112335313300008041CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQ
Ga0099806_124958513300008041CoralVNLASNCDYNHGANTRIYMGVNKVLLLLNEHGDPSFLFQNLSSYNINNQ
Ga0099806_157413613300008041CoralRDYNHGAIIRIYMGINKVLLLLNEHVDPSFLFQNPSSYKINNQ*
Ga0100406_107700713300008042CoralVNLGSNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNIN
Ga0100406_110909123300008042CoralPILSVEQKAIVGNVNLASNRDYNHGVIIRIYMGINKVLLLLNEHGDP*
Ga0100406_119509223300008042CoralVNLASNRDYNHGAIVRIYMGINKVLLLLNEHGDPSFLFQNL
Ga0100406_126282113300008042CoralVNLASNRDYNHDAIIRIYMGINKVLLLLNEHGDPSFLFQNL
Ga0100406_131491323300008042CoralGNVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLRSYNINNP*
Ga0099807_103104813300008043CoralVNLASNCDYNHGANTRIYMGVNKVLLLLNEHGDPSFLFQNLSSYNINN
Ga0099807_108036513300008043CoralSNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0099807_119839913300008043CoralMNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFL
Ga0099807_126129323300008043CoralIVGNVNLASNPDYNHGAIIRIYMGINKVLLLLNEQGTPHFFFKI*
Ga0099804_105917013300008044CoralVGNVNLASNPDYNHGAIIRIYMGINKVLLLLNEQGTPHFFFKI*
Ga0099804_114692013300008044CoralMNLASNRDYNHGAIIRIYMGTNKVLLLLNEHGDPSF
Ga0099804_118920533300008044CoralMNLASNRNYNHGAIVRIYMGLNKVLLLLNEHGDPSFLFQNLSSYNIN
Ga0099804_120033413300008044CoralGNVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNP*
Ga0099804_123660423300008044CoralNYNHGAIVRIYMGLNKVLLLLNEHGDPSFLFQNLSSYNINN*
Ga0100405_100702813300008045CoralGNMNLASNRDYNHGAIIRIYMGINKVLLLLNKHGNPSFLSQNLSSYNINNQ*
Ga0100405_102039123300008045CoralVNLANNRDYNHDVIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYN
Ga0100405_103713933300008045CoralLASNRDYNHGAIIRIYMGINKVLLLLNKHGDPSFLFQNLSSYIINNQ*
Ga0100405_104367013300008045CoralSNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSCNINNP*
Ga0100405_104608613300008045CoralMNLASNCNYNHGAIVRIFMGINKVLLLLNKHGDPSFLFQNLSSYNIN
Ga0100405_105901613300008045CoralVGNVNLASNCDYNHGAIIRICMGINKMLLFLNEHGDPSFLFQNLSSYNINNQ*
Ga0100405_113343223300008045CoralNLASNRDYNHGAIIRIYMGINKVLLLLDEHGDPSFLFQNLRSYDINNQ*
Ga0100404_106894533300008047CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFL
Ga0100404_120116413300008047CoralGNVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSCNINNP*
Ga0100404_122004663300008047CoralMNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLF
Ga0100404_123018413300008047CoralVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0100404_127081313300008047CoralMNLASNRDYNHGAIIRIYMGTNKVLLLLNEHGDPSFLFQNLS
Ga0100404_151056213300008047CoralVGNVNLASNRDYNHGAIIRTYMGINKVLLLLNEHGDPSFLFQNLRSYNINNQ*
Ga0133903_100395513300010017Host-AssociatedDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0133900_100910013300010020Host-AssociatedGAIIRIYMGINKVLLLLNEHRDPSFLFQNVISYNTNNQ*
Ga0133900_102515913300010020Host-AssociatedNVNLASNRNYNHGAIIRTLMGINKVLLLLNEHGDPLFLFQNLSSYNINNR*
Ga0133900_103473123300010020Host-AssociatedNVNLASNRNYNHGAIIRIYIGTNKVLLLLNEHGDPSFLFQNISSYNINNR*
Ga0133900_104098513300010020Host-AssociatedNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0133900_109578513300010020Host-AssociatedDSNHVSIIRIFMGINKVLLHLNEHGDPSFLFQNLSSYNINSQ*
Ga0133900_113300813300010020Host-AssociatedASNHNYNHGGIIKISMGINKVLLLLNEHEDPSFLFQNLSSYKINDR*
Ga0133900_113472413300010020Host-AssociatedVGNVNLASNRDYNHGAIKRIYMGINKALLLLNEHGDPSFLFQNLNSYNINNR*
Ga0133905_107863213300010021Host-AssociatedRGAFIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0126338_1004008433300010030CoralMNLASNRNYNHGAIVRIYMGLNKVLLLLNEHGDPSFLFQNLSS
Ga0126338_1004085513300010030CoralVGNVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLF*
Ga0126338_1006490713300010030CoralNYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINMR*
Ga0126338_1008738523300010030CoralVNLASTRDYNHDAIITIYMGIKKVLLLLNEHGDPSFLLQNLSFYNI
Ga0126338_1008745423300010030CoralVNLASNRDYNHDAIITIYMGIKKVLLLLNEHGDPSFLLQNLSFYNI
Ga0126338_1009594813300010030CoralMNLASNRDYNHGAIIRIYMGTNKVLLLLNEHGDPSFL
Ga0126338_1009650013300010030CoralNVNLASNRDYNPGAIIRIYMGINNLLLFLNEHGDPSFLFQNLSSYNINNR*
Ga0126338_1011707023300010030CoralNVNLASNRDYNHGAIIRIYMSINKVLLLLNKHGDPSFLFQNLSSYNINNQ*
Ga0126338_1015032413300010030CoralHDAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSHNINNQ*
Ga0126338_1024835913300010030CoralYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0126338_1034290913300010030CoralKAIVGKMNLARNRDYNHDGIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINSQ*
Ga0126339_1001277853300010033CoralNLASNRNYNHGAIVRIYMGLNKVLLLLNEHGDPSFLFQNLSSHNINN*
Ga0126339_1003514613300010033CoralDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINN*
Ga0126339_1008121813300010033CoralDYNHDAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0126339_1014884613300010033CoralRDYNHDAIITIYMGIKKVLLLLNEHGDPSFLLQNLSFYNINNQ*
Ga0126339_1026052613300010033CoralDYNHGAIIRICMGLNKVLLLLNEHGDPSFLFPNLSSYNINNQ*
Ga0126339_1069037413300010033CoralVNLASNRDYNHGAIIRIYMGINKVLSLLNEHEDPSFLFQNLSSYNI
Ga0126342_1044053013300010034CoralEQEAIVGNVNLASNHGAIYKDLYNINKVLLLLNECGDPPFLFPN*
Ga0126343_1008580433300010035CoralVNLASNHGAIYKDLYGINKVLSLLNERGDPPFLFQNLRCYNTNNQ*
Ga0126341_103095313300010394CoralMNLASNPNYDHGAIIRIYMGINKVLLLLNEDGDPSFLFQNLSSYNINNQ*
Ga0126341_105467213300010394CoralNHGAIIRIYMGINKVLLLLNEHGNPSFLFQNLSSSNINNR*
Ga0126341_105988613300010394CoralNHGAIIRIYMGIDKVLLLLKNHGDPSFLFQNLSSYNINNK*
Ga0126341_106632313300010394CoralVNLASDRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSS
Ga0126341_106637113300010394CoralLASNRDYNHSAVIRIYMGTNKVLLLLNEHGDPSFLFQNLSFYNINNQ*
Ga0126341_106899413300010394CoralIVRNVNLASNRDYNHDAIIRIYMGINKVLLLLNEHGDPSF*
Ga0126341_109959713300010394CoralVNLASNHNYNHGAFVRIYMGINKVLLLLNEHGDPSFLFQNLSSYDINNR*
Ga0126341_110225913300010394CoralHGAIIRIYMGINKVLLLLDKHGYPSFLFQNVSSYNINNQ*
Ga0126341_110422213300010394CoralKAIVGNVNLASNRDYNHGAIIRIYMGINKVLLLLNEHGDP*
Ga0126341_110534713300010394CoralDYNHGAIIRIYMGINKVLSLLNEHGGPSFLFQNLSSYNINNQ*
Ga0126341_111358213300010394CoralGNVNLASNRNYNHGAIIRIYMGTNKVLLLLNEHGDPSFLFQNISSYNINNR*
Ga0126341_115111213300010394CoralHSYGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINNQ*
Ga0126341_118679813300010394CoralRDYNHGAIIRIYMDINKVLLLLDEHGDPSFLFQNSSSYNINNR*
Ga0126341_118943113300010394CoralMKLASNRDYNHGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSS
Ga0126341_118956113300010394CoralVNLASNRDYNHGAIIRIYMGINKVLLPLNKHGDPSFLFQNSSSYNINNQ*
Ga0126341_121642813300010394CoralVNLASNRDYNCGAIIRIYMGINKVLLLLNEHGDPSFLFQNLSSYNINN


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