Metagenome Family F098627

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098627
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	50 residues
Representative Sequence	MTDRFELENKQDLELKKQLEKVDWPIEYGIVSIQLRAGKPTLIKVERTIKLD
Number of Associated Samples	33
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.97 %
% of genes from short scaffolds (< 2000 bps)	2.91 %
Associated GOLD sequencing projects	29
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.117 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (30.097 % of family members)
Environment Ontology (ENVO)	Unclassified (33.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (52.427 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.50% β-sheet: 21.25% Coil/Unstructured: 56.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04233	Phage_Mu_F	24.27
PF06150	ChaB	19.42
PF03354	TerL_ATPase	5.83
PF04480	DUF559	2.91
PF03237	Terminase_6N	2.91
PF00961	LAGLIDADG_1	1.94
PF04466	Terminase_3	1.94
PF05119	Terminase_4	0.97
PF03109	ABC1	0.97
PF09956	DUF2190	0.97
PF13392	HNH_3	0.97
PF00656	Peptidase_C14	0.97
PF11367	DUF3168	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	19.42
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	5.83
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	1.94
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.97
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.97
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
All Organisms	root	All Organisms	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
cellular organisms	root	All Organisms → cellular organisms	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005823\|Ga0078745_1017973	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300013089\|Ga0163203_1133191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	748	Open in IMG/M
3300014656\|Ga0180007_10136799	Not Available	1600	Open in IMG/M
3300014656\|Ga0180007_10523729	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300031539\|Ga0307380_10005328	Not Available	17078	Open in IMG/M
3300032053\|Ga0315284_10001954	All Organisms → cellular organisms → Bacteria	29511	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	89.32%
Terrestrial	Environmental → Terrestrial	10.68%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	46.60%
Freshwater	Environmental → Aquatic → Freshwater	34.95%
Soil	Environmental → Terrestrial → Soil	10.68%
Thermal Springs	Environmental → Aquatic → Thermal Springs	7.77%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	37.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	22.33%
Lake	Environmental → Aquatic → Freshwater → Lake	11.65%
Clay	Environmental → Terrestrial → Soil → Clay	10.68%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	7.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.85%
Coastal	Environmental → Aquatic → Marine → Coastal	3.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	37.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	22.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	10.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	10.68%
Microbial Mats	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats	7.77%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.85%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	30.10%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	22.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	10.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	10.68%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	7.77%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat	7.77%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	3.88%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	3.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.97%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005823	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009528	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010284	Hot spring microbial mat communities from California, USA to study Microbial Dark Matter (Phase II) - Cone Pool mat layer H metaG	Environmental	Open in IMG/M
3300013089	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_330m	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300014613	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PW_MetaG	Environmental	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300020171	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaG	Environmental	Open in IMG/M
3300022548	Cone Pool_combined assembly	Environmental	Open in IMG/M
3300024429	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)	Environmental	Open in IMG/M
3300024432	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300031278	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-170	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031551	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-110	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031651	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-210	Environmental	Open in IMG/M
3300031654	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-200	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0069718_157906781	3300004481	Sediment	TPFPSKLRLCACASNAMTDRLELENKQDSELKRQLEQVKWPIEYGNIRIQLRAGKPTLITIEKTIKLD*
Ga0079367_10097644	3300005782	Marine Sediment	MNEQDEELKKQLEKIKWPIEYGIVSVQIREGKSTLVKVERTIKLD*
Ga0079367_11015163	3300005782	Marine Sediment	MTDKFELENKEDIELKRQLDQVKWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0078745_10179736	3300005823	Marine Sediment	MTDKLEIADRQDDALKRQLEKVDWPVDYGSVKIQLRAGIGHS*
Ga0111033_12441871	3300008516	Marine Sediment	MERLMNEQDEELKKQLEKIKWPIEYGIVSVQIREGKSTLVKVERTIKLD*
Ga0114925_100041382	3300009488	Deep Subsurface	MTDKLEIQNQQDIDLKKQIEGIDWTIDYGNVKIQIRQGKPTLVTIERTVKLD*
Ga0114925_100219314	3300009488	Deep Subsurface	MTDKFESENKQDTEFRKHLEKVTWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114925_100384753	3300009488	Deep Subsurface	MTDKFDIENKQDAEFRKQLEKIDWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114925_100759061	3300009488	Deep Subsurface	EFRKQLEKIAWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114925_101653265	3300009488	Deep Subsurface	MTDRFESENKQDAEFRKQLDKIAWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114925_103692581	3300009488	Deep Subsurface	MTDKFDIENKQDAEFRKQLDKIAWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114925_103733062	3300009488	Deep Subsurface	MTDKFNIENKQDAEFRKQLDKITWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114920_100285016	3300009528	Deep Subsurface	MTIELENKQDAEFKKQLEKIVWPIEYGIVSIQLRAGKPTLIKVERTIKLD*
Ga0114920_102778184	3300009528	Deep Subsurface	MIDRLDLENKQDIEFKEQLEKIAWPIDYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114920_111951062	3300009528	Deep Subsurface	MTIELENKQDIELKKQLDKVTWPIEYGIISIQLRAGKATLIKVERTIKLD*
Ga0114919_100766373	3300009529	Deep Subsurface	MVEHNQQDIELKKQLEKIDWPIEYGIISIQLRAGKPTLIKIERTIKLD*
Ga0114919_101202801	3300009529	Deep Subsurface	MTEFEDKQDAELKKQLEQVKWPVEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114919_101721414	3300009529	Deep Subsurface	VCLGAGNAEMTDRLDLENKQDSELKRQLEQVDWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114919_103305652	3300009529	Deep Subsurface	MTDKIDLENKQDSELKRQLDKVDWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114919_105602882	3300009529	Deep Subsurface	MTDKFDLENKQDSELKRQLDKVDWPIEYGIISIQLRAGKPTLIKVERTI
Ga0114919_108120241	3300009529	Deep Subsurface	MTDKFELENKQDSELKRQLDKVDWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114919_109881452	3300009529	Deep Subsurface	MTIELEDKQDIELKKQFDKITWPIEYGIISIQLRAGKPTLIRV
Ga0114919_110827532	3300009529	Deep Subsurface	MTDKFNLENKEDIELKRQLDKVDWPIEYGIISIQLRAGKPTLIKVERTIKLD*
Ga0114919_111409301	3300009529	Deep Subsurface	MGIIDTQNQQDIELKKQLEKIDWPIDYGNIRIQLRAGKPTLVTIERTIKLD*
Ga0129301_10369853	3300010284	Hot Spring Microbial Mat	MTEAEENELKEKLSQIKWPIEYGNIKIQIREGKPTLIYVEKTIKLD*
Ga0129301_10658272	3300010284	Hot Spring Microbial Mat	MTEAEENELKDKLNQIKWPIEYGNIKIQIREGKPTLIYVEKTIKLD*
Ga0129301_10798392	3300010284	Hot Spring Microbial Mat	MTEAEENELKEKLSQIKWPIEYGNIKIQIREGKPTLVYVEKTIKLD*
Ga0129301_11204472	3300010284	Hot Spring Microbial Mat	MTEAEENELKDKLSQIKWPIEYGNIKIQIREGKPTLIYVEKTIKLD*
Ga0163203_11331912	3300013089	Freshwater	MNDKLEIENQQELELKKSLEKIDWPVDYGNVKIQIRNGKITLLTIE
(restricted) Ga0172364_102010642	3300013129	Sediment	MIDRLEIQNTRDLELKKQLEKVTWPIDYGTVKIQVRQGKPSLVTVERTIKQD*
(restricted) Ga0172364_103734962	3300013129	Sediment	MIDRLEIQNTRDQELKKQLERVDWPIDYGTVKIQVRQGKPTLVTVERTIKLD*
(restricted) Ga0172363_102595272	3300013130	Sediment	MIDRLEIQNTRDLELKKQLEKVTWPIDYGTVKIQVRQGKPTLVTIERTIKLD*
(restricted) Ga0172363_103970901	3300013130	Sediment	PGDAEMIDRLEIQNTRDLELKKQLERIVWPIDYGTVKIQVRQGKPTLVTVERTIKLD*
(restricted) Ga0172362_102429531	3300013133	Sediment	MIDRLEIQNTRDLELKKQLERKVWPIDYGTVKIQVRQGKPTLVTVERTIKL
Ga0180008_10361161	3300014613	Groundwater	MTDRVELENREDEILKKELEKIDWPIRYGIITIQLRDGKPTLGRIERTVKWD*
Ga0180008_11354412	3300014613	Groundwater	MAGGVEILNEQDEALKKELEKIDWPIEYGIITIQIRDGRPSLLKIERTVKLD*
Ga0180008_11575851	3300014613	Groundwater	MDKFELENKQDMELKRQLEQVNWPIDYGIISIQLRAGRPTLIKVERTIKLD*
Ga0180008_11645332	3300014613	Groundwater	MTDKLEITNSQDIELKKQLEKIDWPIEYGNVKIQLRAGKPTLVTIERTIKLD*
Ga0180008_11753722	3300014613	Groundwater	MDKVEMPRQEDTELKRQLDKIEWPIEYGNIRIQLRAGKPTLLVIEKTVKLD*
Ga0180008_12221782	3300014613	Groundwater	MDKLEIQNQKDSELKKQLEKIPWPIDYGNIKIQLRAGKPTLVVVERTKRLD*
Ga0180008_12901982	3300014613	Groundwater	MTDHQDEELKKELEKIDWPIEFGIITIQLRTGKPTLLKIERTVKLD*
Ga0180007_101367991	3300014656	Groundwater	MIEIQNQPDIELKKQLGKIDWPIEFGTVKITIRAGKVTLLTIERTVKMD*
Ga0180007_101741553	3300014656	Groundwater	VTERLEIQSQQDIDLKKQLDKIGWPIAYGNIKIQLRAGKPTLVTIERTIKLD*
Ga0180007_103117342	3300014656	Groundwater	MTDKVVLESQQDSELKRQLDNVRWPIEYGVVSIQIRAGKPTLVKVERTIKLD*
Ga0180007_103312871	3300014656	Groundwater	MTDRLEIQNQQDISLKKELEKIDWPIEYGTVKVTIRAGKPTLVTIERTVKLD*
Ga0180007_103559422	3300014656	Groundwater	MTERLEIQNQQDIELKKQLEKIDWPTQYGNVKVQIRNGKVTLLTVERTIKLD*
Ga0180007_104387622	3300014656	Groundwater	MDKLEIQNQKDGELKKQLEKIPWPIDYGNIKIQLRAGKPTLVVVERTIRLD*
Ga0180007_105237292	3300014656	Groundwater	MSDNQQDIELKKELDKVDWPIEFGIITIQLRNGKPTLLTIERTVKLD*
Ga0180007_105264053	3300014656	Groundwater	MTDKLEITNSQDIELKKQLEKIDWPIEYGNVKIQLRAGKPTLV
Ga0180007_106173342	3300014656	Groundwater	MERLEIQNQQDIDLKKELEKVDWPIEYGIITIQLRNGKPSLLKIERTVKLD*
Ga0180007_107630093	3300014656	Groundwater	MIDKVRIEQDIELARQLDKIDWPIEYGIISVQIRGGKPTLVKVERTIKLD*
Ga0180007_107864682	3300014656	Groundwater	MTTETWNRQDQELKKQLEKIDWPIEFGIITIQLRNGKPTLLKIERTVKLD*
Ga0180732_10489332	3300020171	Groundwater	MMTDRLEIENQKDLELKKQLEKVDWPIEYGIMRIQLRAGKPTLVTIERTIKLD
Ga0180732_10595432	3300020171	Groundwater	MMPDKLELINQEDINLKKQLEKIDWPIDYGNIKVQLRAGKPTLITIERTVKLD
Ga0180732_10924692	3300020171	Groundwater	MTDRLEIQNQQDIDLKKALEKIDLTIDYGTVTMQVRAGKVTMVKIERTIKLD
Ga0180732_11063982	3300020171	Groundwater	MERLEIQGQKDIDLKKQLEGIDWPIEYGTIKVRLWAGKLTLVTIERTVKLD
Ga0180732_11157322	3300020171	Groundwater	MTDRLEIENQKDLELKKQLERIDWPIEYGVVKLQLRAGKVTLVTVERTIKLD
Ga0212092_10349975	3300022548	Hot Spring Microbial Mat	MTEAEENELKEKLSQIKWPIEYGNIKIQIREGKPTLVYVEKTIKLD
Ga0212092_10406683	3300022548	Hot Spring Microbial Mat	MTEAEENELKEKLSQIKWPIDYGNIKIQIREGKPTLVYVEKTIKLD
Ga0212092_11449592	3300022548	Hot Spring Microbial Mat	MTEAEENELKDKLNQIKWPIEYGNIKIQIREGKPTLIYVEKTIKLD
Ga0212092_13449722	3300022548	Hot Spring Microbial Mat	MTEAEENELKDKLSQIKWPIEYGNIKIQIREGKPTLIYVEKTIKLD
Ga0209991_100253614	3300024429	Deep Subsurface	MTIELENKQDAEFKKQLEKIVWPIEYGIVSIQLRAGKPTLIKVERTIKLD
Ga0209977_100003079	3300024432	Deep Subsurface	MTDKLEIQNQQDIDLKKQIEGIDWTIDYGNVKIQIRQGKPTLVTIERTVKLD
Ga0209977_100258492	3300024432	Deep Subsurface	MTDRFESENKQDAEFRKQLEKIAWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209977_100266997	3300024432	Deep Subsurface	MTDKFDIENKQDAEFRKQLEKIDWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209977_100309885	3300024432	Deep Subsurface	MTDKFESENKQDTEFRKHLEKVTWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209977_100564443	3300024432	Deep Subsurface	MTDKFDIENKQDAEFRKQLDKIAWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209977_100734822	3300024432	Deep Subsurface	MTDKFNIENKQDAEFRKQLDKITWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209977_101384295	3300024432	Deep Subsurface	DQMTDRFESENKQDAEFRKQLDKIAWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209986_102028002	3300024433	Deep Subsurface	MVEHNQQDIELKKQLEKIDWPIEYGIISIQLRAGKPTLIKIERTIKLD
Ga0209986_103576202	3300024433	Deep Subsurface	MTDRLDLENKQDSELKRQLEQVDWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209986_103639181	3300024433	Deep Subsurface	MCLSSGDVEMTDKFNLENKEDIELKRQLDKVDWPIEYGIISIQLRAGKPTLIKVERTIKL
Ga0209986_104646542	3300024433	Deep Subsurface	ELENKQDSELKRQLDKVDWPIEYGVISIQLRAGKPTLIKVERTIKLD
Ga0209635_104585062	3300027888	Marine Sediment	MTDKIELENQQDIELKKQLNNIEWPIEYGIISIQLRAGKPTLVKVERTIKLD
Ga0209635_105109453	3300027888	Marine Sediment	ENKQDIELKRQLEQVKWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209635_106463092	3300027888	Marine Sediment	MTDKFDLENKQDIEFKRQLEQVNWPIKYGIVSIQLRAGKPTLIKVERT
Ga0209635_109464491	3300027888	Marine Sediment	MCIGSCDVEMTDKIELENKQDIELKRQLEKVDWPIEYGIISIQLRAGKPTLIKVERTIKL
Ga0209635_110312332	3300027888	Marine Sediment	QDIELKRQLNKIEWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0209635_110489134	3300027888	Marine Sediment	VERLKKQLENVTWPIGYGIISIQLRNGKVTFVKIEQTLKFD
Ga0209635_111383801	3300027888	Marine Sediment	EMTDKFDLDNKQDIEFKRQLEQVNWPIEYGIILIQLRAGKLTLIKVERTIKLD
Ga0209427_100657682	3300027901	Marine Sediment	MTDKFDLENKQDIEFKRQLEQVNWPIKYGIVSIQLRAGKPTLIKVERTIKLD
Ga0307431_10061935	3300031278	Salt Marsh	MTKLESQQDAKLKEQLDKIDWPIAYGNIRIQLREGKPTLITIERTIKLD
Ga0307380_1000532818	3300031539	Soil	MDKLDIENKQDLELKRQLEKVDWPIEYGIVSIQLRAGKPTLIKVERTIKLD
Ga0307380_101471954	3300031539	Soil	MTDVELKEELERISWPIKYGTITLQLRDGKPTLMKIERTIKLD
Ga0307380_103575491	3300031539	Soil	MTDRFELENKQDLELKRQLEKVNWPIEYGIVSIQLRAGKPTLIKVERTIKLD
Ga0307380_103697642	3300031539	Soil	VTERLEIQSQQDIDLKKQLDKIGWPIAYGNIKIQLRAGKPTLVTIERTIKLD
Ga0307380_107701432	3300031539	Soil	VTERLEIINQQDIELKRQLEKVVWPIEYGNIKIQLRGGKPTLVTIERTVKLD
Ga0307380_111345042	3300031539	Soil	MDKLDIENKQDLELKRQLEKVDWPIEYGIISIQLRAGKPTLVKVERTIKLD
Ga0315548_10081736	3300031551	Salt Marsh Sediment	MTDKLENKEDLELKGQLEKIVWPIEYGVISIHLRAGKPTLIKVERTIKLD
Ga0307378_112400551	3300031566	Soil	MTDRLEIPIGELVELKKQLVKIDWRIGYGTVKIQIRQGKPTLVTIERTIKLD
Ga0307378_113751521	3300031566	Soil	MMNKLEIQNSQDAEFKRQLERIDWPIEYGNIRIQLRASKPTLIVIERTIKLD
Ga0307376_1000329627	3300031578	Soil	MTDRIELENTQDMELKRQLETVSWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0307376_100126638	3300031578	Soil	MIDKFELENKQDLELKRQLEKVDWPIEYGIISIQLRAGKATLIKVERTIKLD
Ga0307376_100463994	3300031578	Soil	MTDRFELENKQDLELKKQLEKVDWPIEYGIVSIQLRAGKPTLIKVERTIKLD
Ga0315545_10869814	3300031624	Salt Marsh Sediment	VEMTDRLDIENKEDIELKRQLEQVKWPIEYGIISIQLRAGKPTLIKIERTVKLD
Ga0315543_10793184	3300031651	Salt Marsh Sediment	MTDKIELTNKQDEELKRQLGMIDWPVEYGIVSIQVRAGKPTLVKVERTIKLD
Ga0315549_13417722	3300031654	Salt Marsh Sediment	MTDKIELTNKQDEELKRQLGMIDWPVEYGIVSIQVRAGKPTLVKVERTIKL
Ga0315288_102790883	3300031772	Sediment	MDRLELENKEDTEFKKQLDQVKWPIEYGIISIQLRAGKPTLVKVQRTIKLD
Ga0315288_110990263	3300031772	Sediment	KEDTEFKKQLDQVKWPIEYGIISIQLRAGKPTLVKVERTIKLD
Ga0315294_108193063	3300031952	Sediment	MDRLELENKEDTEFKRQLEQVKWPIEYGIISIQLRAGKPTLVKVERTIKLD
Ga0315289_100432264	3300032046	Sediment	MDRLELENKEDTEFKKQLEQVKWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0315289_103805384	3300032046	Sediment	KELENKKDREFKKQLDKIDWPIEYGIISIQLRAGKPTLIKVERTIKLD
Ga0315284_1000195426	3300032053	Sediment	MTDRLEIINPQDVELKRQLDNIKWPIDYGSLKLQLRAGKITLVTVERTIKLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters