Metagenome / Metatranscriptome Family F098589

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098589
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	80 residues
Representative Sequence	MARDKGTARAPRSRSAPRVVAPRNKVNVALPFSRITAEEPMKMTVGDWISLAGLVISVAGFSVVIWQLTRSARASKAD
Number of Associated Samples	75
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.27 %
% of genes near scaffold ends (potentially truncated)	24.27 %
% of genes from short scaffolds (< 2000 bps)	78.64 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.398 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (19.417 % of family members)
Environment Ontology (ENVO)	Unclassified (21.359 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.456 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.13% β-sheet: 0.00% Coil/Unstructured: 68.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10400	Vir_act_alpha_C	3.88
PF00582	Usp	3.88
PF06197	DUF998	3.88
PF13828	DUF4190	1.94
PF00392	GntR	1.94
PF06724	DUF1206	1.94
PF13460	NAD_binding_10	1.94
PF01548	DEDD_Tnp_IS110	1.94
PF10745	DUF2530	1.94
PF13193	AMP-binding_C	0.97
PF02467	Whib	0.97
PF13683	rve_3	0.97
PF06689	zf-C4_ClpX	0.97
PF03007	WES_acyltransf	0.97
PF01965	DJ-1_PfpI	0.97
PF12920	TcdA_TcdB_pore	0.97
PF12900	Pyridox_ox_2	0.97
PF01183	Glyco_hydro_25	0.97
PF00485	PRK	0.97
PF06974	WS_DGAT_C	0.97
PF04972	BON	0.97
PF04107	GCS2	0.97
PF00011	HSP20	0.97
PF01636	APH	0.97
PF00892	EamA	0.97
PF11578	DUF3237	0.97
PF00929	RNase_T	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3371	Uncharacterized membrane protein	Function unknown [S]	3.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.94
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.97
COG4908	Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.54 %
Unclassified	root	N/A	46.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.97 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.57 %
Unclassified	root	N/A	46.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.86 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.59 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.91 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.59 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.91 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.91 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.94 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.59 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.91 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.91 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	1.94 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.59 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.91 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.91 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	1.94 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.59 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.91 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.91 %
Blastococcus sp. TF02A-30	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	1.94 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100142478	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300000956\|JGI10216J12902_113368200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	904	Open in IMG/M
3300000956\|JGI10216J12902_114344800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1471	Open in IMG/M
3300003219\|JGI26341J46601_10078730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	987	Open in IMG/M
3300004479\|Ga0062595_101818965	Not Available	579	Open in IMG/M
3300005332\|Ga0066388_100116953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3178	Open in IMG/M
3300005332\|Ga0066388_100354315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2114	Open in IMG/M
3300005332\|Ga0066388_102076376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1021	Open in IMG/M
3300005332\|Ga0066388_104455383	Not Available	713	Open in IMG/M
3300005467\|Ga0070706_100462277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1181	Open in IMG/M
3300005468\|Ga0070707_100006518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10841	Open in IMG/M
3300005574\|Ga0066694_10620847	Not Available	504	Open in IMG/M
3300005764\|Ga0066903_104261612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300006046\|Ga0066652_101523873	Not Available	619	Open in IMG/M
3300006047\|Ga0075024_100477647	Not Available	649	Open in IMG/M
3300006059\|Ga0075017_100075871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2305	Open in IMG/M
3300006102\|Ga0075015_100363948	Not Available	809	Open in IMG/M
3300009012\|Ga0066710_101314622	Not Available	1121	Open in IMG/M
3300009137\|Ga0066709_100083349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3829	Open in IMG/M
3300010326\|Ga0134065_10488502	Not Available	511	Open in IMG/M
3300010337\|Ga0134062_10120471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300010361\|Ga0126378_10461298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300010362\|Ga0126377_12684318	Not Available	573	Open in IMG/M
3300010379\|Ga0136449_100955422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1387	Open in IMG/M
3300016270\|Ga0182036_10635011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300016357\|Ga0182032_10575958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	934	Open in IMG/M
3300016357\|Ga0182032_11742847	Not Available	544	Open in IMG/M
3300016404\|Ga0182037_11048954	Not Available	712	Open in IMG/M
3300017926\|Ga0187807_1030568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1668	Open in IMG/M
3300017926\|Ga0187807_1038709	Not Available	1476	Open in IMG/M
3300017928\|Ga0187806_1210838	Not Available	661	Open in IMG/M
3300017937\|Ga0187809_10177219	Not Available	748	Open in IMG/M
3300017939\|Ga0187775_10494060	Not Available	521	Open in IMG/M
3300017944\|Ga0187786_10043195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1325	Open in IMG/M
3300017947\|Ga0187785_10617619	Not Available	559	Open in IMG/M
3300017959\|Ga0187779_10666268	Not Available	701	Open in IMG/M
3300017966\|Ga0187776_10636905	Not Available	747	Open in IMG/M
3300017966\|Ga0187776_10699915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	717	Open in IMG/M
3300017966\|Ga0187776_10795088	Not Available	678	Open in IMG/M
3300017966\|Ga0187776_11617652	Not Available	502	Open in IMG/M
3300017974\|Ga0187777_10695912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300017974\|Ga0187777_11223001	Not Available	550	Open in IMG/M
3300017999\|Ga0187767_10239942	Not Available	592	Open in IMG/M
3300018058\|Ga0187766_11159398	Not Available	558	Open in IMG/M
3300018060\|Ga0187765_10060222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1978	Open in IMG/M
3300018060\|Ga0187765_11127570	Not Available	546	Open in IMG/M
3300018064\|Ga0187773_10377246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	815	Open in IMG/M
3300018064\|Ga0187773_11140948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300018089\|Ga0187774_10090745	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300018089\|Ga0187774_10149309	Not Available	1224	Open in IMG/M
3300018089\|Ga0187774_10528992	Not Available	748	Open in IMG/M
3300018482\|Ga0066669_10069864	Not Available	2316	Open in IMG/M
3300021560\|Ga0126371_10282290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1783	Open in IMG/M
3300021860\|Ga0213851_1851696	Not Available	957	Open in IMG/M
3300021861\|Ga0213853_11380782	Not Available	617	Open in IMG/M
3300021861\|Ga0213853_11381475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300025527\|Ga0208714_1057665	Not Available	828	Open in IMG/M
3300025910\|Ga0207684_10287944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1417	Open in IMG/M
3300025922\|Ga0207646_10008408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10349	Open in IMG/M
3300025928\|Ga0207700_11813771	Not Available	536	Open in IMG/M
3300027812\|Ga0209656_10022790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3809	Open in IMG/M
3300027915\|Ga0209069_10318894	Not Available	830	Open in IMG/M
3300028819\|Ga0307296_10353400	Not Available	803	Open in IMG/M
3300031231\|Ga0170824_119014236	Not Available	520	Open in IMG/M
3300031543\|Ga0318516_10064584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2019	Open in IMG/M
3300031572\|Ga0318515_10701594	Not Available	535	Open in IMG/M
3300031573\|Ga0310915_10356750	Not Available	1037	Open in IMG/M
3300031771\|Ga0318546_10153853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1551	Open in IMG/M
3300031799\|Ga0318565_10283221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300031821\|Ga0318567_10491435	Not Available	697	Open in IMG/M
3300031831\|Ga0318564_10473207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300031833\|Ga0310917_10321055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300031845\|Ga0318511_10212514	Not Available	862	Open in IMG/M
3300031859\|Ga0318527_10334312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300031890\|Ga0306925_10671592	Not Available	1087	Open in IMG/M
3300031890\|Ga0306925_11232034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300031897\|Ga0318520_11079420	Not Available	508	Open in IMG/M
3300031946\|Ga0310910_10985437	Not Available	659	Open in IMG/M
3300031981\|Ga0318531_10140077	Not Available	1080	Open in IMG/M
3300032001\|Ga0306922_11846486	Not Available	593	Open in IMG/M
3300032009\|Ga0318563_10567030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300032065\|Ga0318513_10496985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300032160\|Ga0311301_10606782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1575	Open in IMG/M
3300032160\|Ga0311301_12568380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300032770\|Ga0335085_10025407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8335	Open in IMG/M
3300032770\|Ga0335085_10073483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4514	Open in IMG/M
3300032770\|Ga0335085_10227332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2262	Open in IMG/M
3300032782\|Ga0335082_10035147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5296	Open in IMG/M
3300032783\|Ga0335079_10001943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23730	Open in IMG/M
3300032783\|Ga0335079_10002892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19795	Open in IMG/M
3300032783\|Ga0335079_10240068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1996	Open in IMG/M
3300032783\|Ga0335079_11809175	Not Available	594	Open in IMG/M
3300032805\|Ga0335078_10111909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3923	Open in IMG/M
3300032805\|Ga0335078_10704681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300032805\|Ga0335078_11400826	Not Available	789	Open in IMG/M
3300032828\|Ga0335080_10125618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2847	Open in IMG/M
3300032828\|Ga0335080_10235285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2005	Open in IMG/M
3300032893\|Ga0335069_10176585	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300032955\|Ga0335076_10091674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	2970	Open in IMG/M
3300032955\|Ga0335076_11414470	Not Available	581	Open in IMG/M
3300033134\|Ga0335073_10225338	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300033805\|Ga0314864_0020909	Not Available	1360	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.38%
Aquatic	Environmental → Aquatic	12.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.38%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Sediment	Environmental → Aquatic → Sediment	3.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	36.89%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	36.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	19.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	16.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.88%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1001424781	3300000956	Soil	MANGKRAALASRSRSAPRVVAPRNKVNVALPFGRITAEEPVKMKVGDWTGLAGLVISVIGFSVVIWQHIRS
JGI10216J12902_1133682002	3300000956	Soil	MANRKRTAPASRSRSAPRVVAPTNKVNVALPFGKITAEEPMKMKAGHWTSLAGLVISVIGFSVVIWQHIRS
JGI10216J12902_1143448001	3300000956	Soil	MARDKGTARAPRSRSAPRVVAPRNKVNVALPFSRITAEEPMKMTVGDWISLAGLVISVAGFSVVIWQLTRSARASKAD*
JGI26341J46601_100787302	3300003219	Bog Forest Soil	MANRKATAVAPRSRSAPKVVAPTNKVNVALPFSRLTVEEPTTLTAGELISLAGLVVSVIGFSIVIWQFTRAANAPEAGQAG*
Ga0062595_1018189651	3300004479	Soil	MANGKRAALASRSRSAPRVVAPRNKVNVALPFGRITAEEPVKMKVGDWTGLAGLVISVIGFSVVIWQHIRSAKASEAD*
Ga0066388_1001169534	3300005332	Tropical Forest Soil	VAGDKGAALASRSRSAPKVVAPQNKVNVALPLGRITVEEPVKMAVRDWISLAGLAVSVAGFSVVIWQLIRSTKASEAD*
Ga0066388_1003543151	3300005332	Tropical Forest Soil	MAESNGTSLATRSRSAPRVVSPRNKVNVALPFSRFTVQEPMKMTVGDWIGLAALVISVAGFSVVIWQSARTANGSEADRASYRAG*
Ga0066388_1020763762	3300005332	Tropical Forest Soil	MARAKGAAPAPRSRSAPRIVAPGSTVTVALPFSNITAEKPVKMEAGDWISLAGLVITVAGFSAVIWQLIRSAKAPEAD*
Ga0066388_1044553832	3300005332	Tropical Forest Soil	MGGRQDTAPAPRARSAPKVVAPRTRTNVALPFARFTVQEPAMTAGDWISLAGLVISVIGFSVVIRQSARTANAPETGG*
Ga0070706_1004622771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MANRKSTARALRSQSAPQVVSPRNRTNVAFPLSFSRFTTEEPAMTVRDWTSLAGLVVSVIGFSVVIWQFTRAANDREENHASHRAA*
Ga0070707_1000065189	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MARRKSTDLAPRSGSAPQVVSPRNKTNVALPFSRFTVEEPVKMTVGDWISLAGLVVSVIGFSVVIWQFIRTPNAEAVQHSNTATS*
Ga0066694_106208472	3300005574	Soil	YTHVAAPSLWLMGGCEMANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKVGDWTGLAGLVISVIGFSVVIWQHIRSAKASEAD*
Ga0066903_1042616122	3300005764	Tropical Forest Soil	MAGNKDTTLAPRSRSAPRVVAPRNKVNVAFPLSRITAEEPVKMKVGDWISLAGLVISVAGFSLVIWQLIRGTKASEAD*
Ga0066652_1015238731	3300006046	Soil	MANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKVGDWTGLAGLVISVIGFSVVIWQHIRSAKASEAD*
Ga0075024_1004776472	3300006047	Watersheds	MASSKGTTRAPRSRSAPRVVSPRNNTNVALPFSKLTVDQPAQMTVGDWISLAGLVVSVIGFSVLIWQSIRTAKASEGNQEAIERDERALDDR*
Ga0075017_1000758716	3300006059	Watersheds	MSTIPLADGGNEMARDKDNALAPRSRSAPRVIAPRNKVNVALPFSKITAEEPVNMKVGDWISLAGLAVSVAGFSVVIWQHIRSTRAP*
Ga0075015_1003639481	3300006102	Watersheds	MHVGGGEMAGDKGATLTPRSRSAPRVVAPRNNVNVALPFSKITAEEPAKMKVGDWISLAGLVIAAAGFSVVIWQLARSPRAAEAA*
Ga0066710_1013146222	3300009012	Grasslands Soil	MANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKAGDWTGLAGLVISVIGFSVVIWQHIRSAKTAEAD
Ga0066709_1000833492	3300009137	Grasslands Soil	MGGCEMANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKVGDWTGLAGLVISVIGFSVVIWQHIRSAKASEAD*
Ga0134065_104885022	3300010326	Grasslands Soil	MGGCEMANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKVGDWTGLAGLVISVIGFSVV
Ga0134062_101204711	3300010337	Grasslands Soil	MGGCEMANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKVGDWTGLAGLVISVIGFSV
Ga0126378_104612981	3300010361	Tropical Forest Soil	MTHDKGAVMAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKMGDWISLAGLLVSVAGFSVVIWQFTRGARAPEAD*
Ga0126377_126843181	3300010362	Tropical Forest Soil	LMGGCEMAGGKGTGLAPRSRSAPSVVENRNRMNVALPFSRITAEEPVKMQVGDWISLAGLVVSIAGFSVVIWQLTRSARASGED*
Ga0136449_1009554221	3300010379	Peatlands Soil	MASRKATAVAPRSRLAPKVVAPTNKVNVALPFSRLTVAEPAKLTAGDWISLAGLVVSVIGFSIVIWQFTRAATNAPGAGQAG*
Ga0182036_106350111	3300016270	Soil	APRSRSAPRVVAPRNKVNVALPLGRITAAEPMNMKVGDWISLAGLMVSVAGFSVVIWQLVRGAGAPKAD
Ga0182032_105759582	3300016357	Soil	MAHDKETTVAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVAGFSVVIWQFIRGAKAPEED
Ga0182032_117428471	3300016357	Soil	MAHDRGAALAPRSRSAPRVVAPRNEVNVALPFGRITAEKPTNMKAGDWISLAGLVVSVAGFSFVIWQFVHGM
Ga0182037_110489542	3300016404	Soil	MARGKGTAPAPRSRSAPKVVAPSTRVNVALPFGRITTKEPVKMEVRDWISLAGLVVSVAGFRVVISQLIRSTRASEAD
Ga0187807_10305681	3300017926	Freshwater Sediment	MANRKATAVAPRSRSAPKVVSPTNRVNVALPFSRLTVGEPAKLTAGELISLAGLVVSVIGFSIVIWQFTRAANAPEAGEAG
Ga0187807_10387092	3300017926	Freshwater Sediment	MANRKSTARALRSHSAPQVVSPRNRTNVAFPLSFSRFTTEEPAMTVRDWTSLAGLVVSVIGFSVVIWQFTRAANDREENHASHRAA
Ga0187806_12108382	3300017928	Freshwater Sediment	MANRKATAVAPRSRSAPKVVSPTNRVNVALPFSRLTVEEPAKLTAGELISLAGLVVSVIGFSIVIWRFTRAANAPEAGQAG
Ga0187809_101772191	3300017937	Freshwater Sediment	MANRKSTARALRSHSAPQVVSPRNRTNVAFPLSFSRFTTEEPAMTVRDWTSLAGLVVSVIGFSIVIWQFTRATNDREENHASHRAA
Ga0187775_104940601	3300017939	Tropical Peatland	MAGGKGAALAPRSRSAPRVVAPRNKVNVALPFSKITAEEPVEMKVEVWISLAGLVVSAAGFGVVIWQLARSARPSEAG
Ga0187786_100431951	3300017944	Tropical Peatland	MAGDKAAARASRSRSAPRVVAPRNKVNVALPLGRITVEQPVKMAVDDWISLAGLVVSVAGFSVVIWQLIRSTKASEAD
Ga0187785_106176191	3300017947	Tropical Peatland	MAVDKGAALAPRSRSAPKVVAPRNKVNVAFPFSRITPEDPVKMKVGDWISLAGQVIVAAGFTVVIWQLARSPRAPEAG
Ga0187779_106662681	3300017959	Tropical Peatland	MADNKGTLAPRSRSAPKVVAPRNNINVALPFSKITAEEPMKLKVGDWISLAGVGISVIGFSVVIWQLIRAANALEAGQADS
Ga0187779_107048991	3300017959	Tropical Peatland	MAHRNGAPLAPRSHSAPRVVSPRNKVNVALPFSRLTVQEPKMTAGDWISLTALVISVTGFGFVIWQSTRPANGSEASRGLATAAASD
Ga0187776_106369051	3300017966	Tropical Peatland	MADRPGTPPAPRSRSAPKIVAPKNKTNVAMPFSRFTVQEPTMTVGDWISLAGLVISVIGF
Ga0187776_106999152	3300017966	Tropical Peatland	MWRMGTVGLAEGGDEMAGGNGAALAPRSRSAPRVVAPRNKVNVAFPFSKITAEEPVTMKVEVWISLAGLVVSAAGFGVVIWQLARSARAPEAG
Ga0187776_107950881	3300017966	Tropical Peatland	MAGRQDTPPAPRSRLAPKIVAPTNKTNVALPFSRFTVQQPAMTVGDWISLAGLVISVIGFSAVIRQSTRTANASKAGN
Ga0187776_116176521	3300017966	Tropical Peatland	MARDKGAAPAPRSRSAPKVVAPRNNVNVALPFSRITAEEPMKMKAGDWISLAGLVISVAGFSAVIWQLIRSAKASEAD
Ga0187777_106959122	3300017974	Tropical Peatland	MAAGKDTALAPRSGSAPRVVAPRNKVNVALPFSKITYEEPMRMRVGDWISLAGLVISVIGFSVAVWQLIRIAKASEADQAGGRQSRS
Ga0187777_112230011	3300017974	Tropical Peatland	MAHGKGAVMAPGSRSAPRLVAPRNKVNVALPLGRITAEEPVNMKVGDWISLAGLVVSVAGFSVVIWQFIRGARAAEAG
Ga0187767_102399421	3300017999	Tropical Peatland	MAGGKGGALAPRSRSAPRVVAPRNKVNVALPFSKIVAEEPVKMKAGDWIGLAGLVVSAAGFGVVIWQLARSAQASEAG
Ga0187766_111593982	3300018058	Tropical Peatland	MAHGKGAVMAPGSRSAPRLVAPRNKVNVALPLGRITAEEPVNMTVGDWISLAGLVVSVAGFSVVIWQFVRGARAAEAD
Ga0187765_100602222	3300018060	Tropical Peatland	MAHGKGAVLAPGSRSAPRLVAPRNKVNVALPLGRITAEEPVNMTVGDWISLAGLVVSVAGFSVVIWQFVRGARAAEAD
Ga0187765_111275702	3300018060	Tropical Peatland	RSAPRVVAPRNKVNVALPFSKIVAEEPVKMKAGDWIGLAGLVVSAAGFGVVIWQLARSAQASEAG
Ga0187773_103772462	3300018064	Tropical Peatland	MANRKSTARAPRSRSAPQVVSHRNSTNVALPLSFSRFTTQEPAMTVKDWISLGGLVVSVIGFSVVIWQFTRAANAREENQPSHRAG
Ga0187773_111409482	3300018064	Tropical Peatland	MASRQDTPPAPRSRLAPKIVAPTNKTNVALPFSRFTVQQPAMTVGDWISLAGLVISVIGFGVVIRQSTRTANAPEADS
Ga0187774_100907453	3300018089	Tropical Peatland	MARDKGAPPAPRSRSAPKVVAPRNNVNVALPFSRITAEEPMKMKAGDWISLAGLVISVAGFSAVIWQLIRSAKASEAD
Ga0187774_101493091	3300018089	Tropical Peatland	MADRPGTPPAPRSRSAPRVVSPRNKTNVAMPFSKFTVQEPAMTVGDVISLAGLVISVIGFSAVIRQSTRTANASKAGN
Ga0187774_105289922	3300018089	Tropical Peatland	MAGGKGAALAPRSRSAPRVVAPRNKVNVALPFSKITAEEPVQMKVEVWISLAGLAVSAAGFGVVIWQLARSARPSEAG
Ga0066669_100698643	3300018482	Grasslands Soil	MANGKRAALASRSRSAPRVVAPRNKVNVALPFGKITAEEPVKMKVGDWTGLAGLVISVIGFSVVIWQHIRSAKASEAD
Ga0126371_102822903	3300021560	Tropical Forest Soil	MARAKGAAPAPRSRSAPRIVAPGSTVTVALPFSNITAEKPVKMEAGDWISLAGLVITVAGFSAVIWQLIRSAKAPEAD
Ga0213851_18516961	3300021860	Watersheds	MHVGGGEMAGDKGATLTPRSRSAPRVVAPRNNVNVALPFSKITAEEPAKMKVGDWISLAGLVIAAAGFSVVIWQLARSPRAAEAA
Ga0213853_113807821	3300021861	Watersheds	PRSRSAPRVVAPRNNVNVALPFSKITAEEPAKMKVGDWISLAGLVIAAAGFSVVIWQLARSPRAAEAA
Ga0213853_113814751	3300021861	Watersheds	PRSRSAPRVIAPRNKVNVALPFSKITAEEPVNMKVGDWISLAGLAVSVAGFSVVIWQHIRSTRAP
Ga0208714_10576651	3300025527	Arctic Peat Soil	MAGDKGTAQAPRSRSAPKVVAPRNNVNVALPFSKITAEDPVKLRAGDWISLAGLVISVIGFSVVIWQLIPTSKASEAGQA
Ga0207684_102879442	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MANRKSTARVPRARSAQAPQVVSPRNRTNVALPLSFARFTTQESAMTVRDWISLAGLVVSVIGFSVVIWQFTRAANDREENHASHRAA
Ga0207646_100084085	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MARRKSTDLAPRSGSAPQVVSPRNKTNVALPFSRFTVEEPVKMTVGDWISLAGLVVSVIGFSVVIWQFIRTPNAEAVQHSNTATS
Ga0207700_118137711	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MANRKSTARVPRARSAQAPQVVSPRNRTNVALPLSFARFTTQESAMTVRDWISLAGLVVSVIGFSVVIWQFTRAANAREENQASHPAA
Ga0209656_100227905	3300027812	Bog Forest Soil	MANRKATAVAPRSRSAPKVVAPTNKVNVALPFSRLTVEEPTTLTAGELISLAGLVVSVIGFSIVIWQFTRAANAPEAGQAG
Ga0209069_103188941	3300027915	Watersheds	MASSKGTTRAPRSRSAPRVVSPRNNTNVALPFSKLTVDQPAQMTVGDWISLAGLVVSVIGFSVLIWQSIRTAKASEGNQEAIERDERALDDR
Ga0307296_103534002	3300028819	Soil	MYARVCTVRLAYGGCEMAGEKGTGRTPRSRSAPRVVAPRNKVNVALPFGRITAEEPVKMKVGDWISLAGLVVSVAGFSVVIWQLIRSIKASEVD
Ga0170824_1190142361	3300031231	Forest Soil	MANRKNTARVPRARSAQAPQVVSPRNRTNVALPLSFARFTTQESAMTVRDWISLAGLVVSVIGFSVVIWQFTRAANAREENQARHPAA
Ga0318516_100645843	3300031543	Soil	MARGKGTAPAPRSRSAPKVVAPSTRVNVALPFGRITTKEPVKMEVRDWISLAGLVVSVAGFSVVISQLIRSTRASEAD
Ga0318515_107015941	3300031572	Soil	MAHDKGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVAGFSVVIW
Ga0310915_103567502	3300031573	Soil	KGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVAGFSVVIWQFIRGAKAPEED
Ga0318546_101538532	3300031771	Soil	SRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLMVSVAGFSVVIWQLVRGAGAPKAD
Ga0318565_102832212	3300031799	Soil	MAHDKGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSAIGFSVVIRELIRIAHASETGEVSHLVGRG
Ga0318567_104914351	3300031821	Soil	MAHDKGAVLAPRSRSAPRVVAPRNKVNVALPFGRITAEKPVDMKMGDWISLAGLVVSVAGFSVV
Ga0318564_104732072	3300031831	Soil	MAHDKETTVAPRSRSAPRVVAPRNKVNVALPLGRITAAEPMNMKVGDWISLAGLVVSVAGFSVVIWQFIRGAKAPEED
Ga0310917_103210552	3300031833	Soil	MAHDKGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSAIGFSVVIRELIRIAHASETGE
Ga0318511_102125142	3300031845	Soil	MAHDKGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVIGFSIAIRQLNRVTSASEAHQVLLDRSLGERLQA
Ga0318527_103343121	3300031859	Soil	DGGCEMAHDKETTVAPRSRSAPRVVAPRNKVNVALPLGRITAAEPMNMKVGDWISLAGLMVSVAGFSVVIWQLVRGAGAPKAD
Ga0306925_106715921	3300031890	Soil	MAHDKETTVAPRSRSAPRVVAPRNKVNVALPLGRITAAEPMNMKVGDWISLAGLMVSVAGFSVVIWQLVRGAGAPKAD
Ga0306925_112320342	3300031890	Soil	MAHDKGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVAGFSVVIWQFIRGAKAPEED
Ga0318520_110794201	3300031897	Soil	MAHDRGAALAPRSRSAPRVVAPRNEVNVALPFGRITAEKPTNMKAGDWISLAGLVVSVAGFSFVIWQFVHGMRAPEAD
Ga0310910_109854372	3300031946	Soil	MAHDKGAALAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVTGFSVVIWQFIRGARAPEAD
Ga0318531_101400771	3300031981	Soil	MARGKGTAPAPRSRSAPKVVAPSTRVNVALPFGRITTKEPVKMEVRDWISLAGLVVSVAGFSVVIWQLIRSTRASEAD
Ga0306922_118464862	3300032001	Soil	MAHDKETTVAPRSRSAPRVVAPRNKVNVALPLGRITAAEPMNMKVGDWISLAGLMVSVAGFSVVIW
Ga0318563_105670301	3300032009	Soil	HMCTIRTADGGCEMAHDKGAVLAPRSRSAPRVVAPRNKVNVALPLGRITAAEPMNMKVGDWISLAGLMVSVAGFSVVIWQLVRGAGAPKAD
Ga0318513_104969851	3300032065	Soil	GGCEMAHDRGAVLAPRSRSAPRVVAPRNKVNVALPFGRITAEKPMDMKVGDWISLAGLVVSVAGFSVVIWQFIRGAKAPEED
Ga0311301_106067821	3300032160	Peatlands Soil	MASRKATAVAPRSRLAPKVVAPTNKVNVALPFSRLTVEEPTKLTAGDWISLAGLVVSVIGFSIVIWQFTRAATNAPGAGQAR
Ga0311301_125683802	3300032160	Peatlands Soil	MADDKGSALAPRSRSAPKVVAPRNNVNVALPFSKITAEEPMKLKVGDWISLAGLVISVIGFSVVIWRLSRIANA
Ga0335085_100254077	3300032770	Soil	MAGGKGAALAPRSRSAPRVVAPRNKVNVALPFSKITAEEPVKMKVEVWISLAGLVVSAAGFGVVIWQLARSARPLEAG
Ga0335085_100734838	3300032770	Soil	MADRPGTPPAPRSRSAPRVVSPRNKTNVAMPFSKFTVQEPAMTVGDVISLAGLVISVIGFSVVIWQSTRPANAPETGS
Ga0335085_102273321	3300032770	Soil	MAADRGTALASRSRSAPRVVAPRNKVNVALPLSRITAVEPMTMRVGDWINLAGLVISVAGFSVVIWQLIRGAKAPEAD
Ga0335082_100351474	3300032782	Soil	MAGGKGGALAPRSRSAPRVVAPRNKVNVALPFSKIVAEEPVKMKAWDWIGLAGLVVSAAGFGVVIWQLARSAQASEAG
Ga0335079_100019435	3300032783	Soil	MANRTSTTRAPRSRSAPQVVSPRNRTNVALPLSFSQFTTEEPAMTARDWISLAGLVVSVIGFSVVIWQHTWAANAREENQASPPAAAGPDQPD
Ga0335079_1000289211	3300032783	Soil	MARDKGNALAPRPRSAPRVIAPRNKVNVALPFSKITAEEPVNMKVGDWISLAGLAVSVAGFSVVIWQHIRSTRAPEAD
Ga0335079_102400683	3300032783	Soil	MTRGKSTAPAPRSRSAPKVVAPANRTNVALPFGRITAEEPVKMEVRDWISLAGLVVSVAGFSVVIWQLVRSTRPSEAD
Ga0335079_118091751	3300032783	Soil	MAGGKGGALAPRSRSAPRVVAPRNKVNVALPFSKIVAEEPVKMKAGDWIGLAGLVVSAAGFGVVIWQLARSARPLEAG
Ga0335078_101119092	3300032805	Soil	MANDKGTALTPRSRSAPRVVAPRNHVNIAFPFSRITAEEPMKMKAGDWISLTGLVISVLGFGVVIWQLIRIANASRADQASGRANRE
Ga0335078_107046813	3300032805	Soil	MANNRGIALAPRSRSAPRVVAPRNNINVAFPFSRITAEEPMKMKVGDWISLAGLGVSVIGFSVAIWQLIRTAHAPDADQANHRANQ
Ga0335078_114008262	3300032805	Soil	MSTIPLADGGNEMARDKGNALAPRPRSAPRVIAPRNKVNVALPFSKITAEEPVNMKVGDWISLAGLAVSVAGFSVVIWQHIRSTRAPEAD
Ga0335080_101256182	3300032828	Soil	MAHGKGAVMAPGSRSAPRLVAPRNKVNVALPLGRITAEEPVNMKVGDWISLAGLVVSVAGFSVVIWQFVRGARAAEAD
Ga0335080_102352851	3300032828	Soil	MAGRQDTPPAPRSRLAPKIVAPTNKTNIALPFARFTVQQPAMTVGDWISLAGLVISVIGFSAVIRQSTRTANASKAGN
Ga0335069_101765855	3300032893	Soil	MANRKSTARALRSHSAPRVVSPRNRTNVAFPLSFSRFTTEEPAMTMRDWTSLAGLVVSVIGFSVVIWQFTRAANDREENHASHRAA
Ga0335076_100916742	3300032955	Soil	MDNRKSTARALRSRSAPRVVSHRNRTNVALPLSFSRFTTQEPAMTVKDWISLGGLVVSVIGFSIVIWQFTRAANAREENQASHRAA
Ga0335076_114144701	3300032955	Soil	MARGKGTAPAARSRSAPKVVAPANRTNVVFPFGRITAEEPVKMEVRDWISLAGLVVSVAGFSVVIWQLIRSTRASEADQASNPPERVLPGTASSATYA
Ga0335073_102253381	3300033134	Soil	MASRKSTARALRSHSAPQVVSPRNRTNVAFPLSFSRFTTEEPAMTVRDWTSLAGLVVSVIGFSVVIWQFTRAANDRENHASHRAA
Ga0314864_0020909_723_959	3300033805	Peatland	MAGGKGAALAPRSRSAPRVVAPRNKVNVALPFSKIVAEEPVKMKAGDWIGLAGLVVSAAGFGVVIWQLARSAQASEAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098589

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences