Metagenome / Metatranscriptome Family F098588

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098588
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	68 residues
Representative Sequence	MAPELPKPDIRPQLRELLAWYEDVLERIASGALVEPGVAERLSEEQEFAARHLELLDADEESPQATE
Number of Associated Samples	75
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.88 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	88.35 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.010 % of family members)
Environment Ontology (ENVO)	Unclassified (33.981 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.282 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.26% β-sheet: 0.00% Coil/Unstructured: 54.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02580	Tyr_Deacylase	2.91
PF00211	Guanylate_cyc	2.91
PF04964	Flp_Fap	1.94
PF00274	Glycolytic	0.97
PF07690	MFS_1	0.97
PF00069	Pkinase	0.97
PF07676	PD40	0.97
PF01965	DJ-1_PfpI	0.97
PF03575	Peptidase_S51	0.97
PF13456	RVT_3	0.97
PF08125	Mannitol_dh_C	0.97
PF01381	HTH_3	0.97
PF13551	HTH_29	0.97
PF00404	Dockerin_1	0.97
PF13302	Acetyltransf_3	0.97
PF04358	DsrC	0.97
PF06210	DUF1003	0.97
PF13191	AAA_16	0.97
PF00072	Response_reg	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.88
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	2.91
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.91
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.94
COG0246	Mannitol-1-phosphate/altronate dehydrogenases	Carbohydrate transport and metabolism [G]	0.97
COG2920	Sulfur transfer complex TusBCD TusE component, DsrC family (tRNA 2-thiouridine synthesizing protein C)	Translation, ribosomal structure and biogenesis [J]	0.97
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.97
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.20 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.32 %
Unclassified	root	N/A	1.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.41 %
Unclassified	root	N/A	1.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.55 %
Unclassified	root	N/A	1.94 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.55 %
Unclassified	root	N/A	1.94 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.55 %
Unclassified	root	N/A	1.94 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.55 %
Unclassified	root	N/A	1.94 %
Kineococcus siccus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig859625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300000956\|JGI10216J12902_100807049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1535	Open in IMG/M
3300000956\|JGI10216J12902_101217966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300000956\|JGI10216J12902_102453230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1555	Open in IMG/M
3300000956\|JGI10216J12902_103428853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1600	Open in IMG/M
3300000956\|JGI10216J12902_107169918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300000956\|JGI10216J12902_114457761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300005093\|Ga0062594_100404284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300005180\|Ga0066685_10703629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300005341\|Ga0070691_10322533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300005356\|Ga0070674_101822912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005445\|Ga0070708_100075934	Not Available	3033	Open in IMG/M
3300005450\|Ga0066682_10113993	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005553\|Ga0066695_10315082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300005566\|Ga0066693_10022800	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300005574\|Ga0066694_10424306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300005937\|Ga0081455_10715362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300009012\|Ga0066710_101521005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1031	Open in IMG/M
3300009137\|Ga0066709_100829953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1342	Open in IMG/M
3300009137\|Ga0066709_102816001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300009789\|Ga0126307_10069210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2776	Open in IMG/M
3300009840\|Ga0126313_10289422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1279	Open in IMG/M
3300010040\|Ga0126308_10435038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300010042\|Ga0126314_10328122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1095	Open in IMG/M
3300010304\|Ga0134088_10541106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300010322\|Ga0134084_10385676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300010326\|Ga0134065_10138428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300011000\|Ga0138513_100009958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1174	Open in IMG/M
3300011003\|Ga0138514_100160087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012198\|Ga0137364_10554741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300012201\|Ga0137365_10344848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1101	Open in IMG/M
3300012204\|Ga0137374_10041381	All Organisms → cellular organisms → Bacteria	4876	Open in IMG/M
3300012204\|Ga0137374_10390338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300012206\|Ga0137380_10091595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2778	Open in IMG/M
3300012206\|Ga0137380_10169277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1990	Open in IMG/M
3300012207\|Ga0137381_10091175	Not Available	2572	Open in IMG/M
3300012208\|Ga0137376_10195648	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1748	Open in IMG/M
3300012211\|Ga0137377_10584149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300012350\|Ga0137372_10015280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7288	Open in IMG/M
3300012350\|Ga0137372_10239187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1434	Open in IMG/M
3300012350\|Ga0137372_10277262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308	Open in IMG/M
3300012350\|Ga0137372_10376271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300012353\|Ga0137367_10247592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	1282	Open in IMG/M
3300012356\|Ga0137371_10099262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2267	Open in IMG/M
3300012356\|Ga0137371_10523981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300012357\|Ga0137384_10334147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300012357\|Ga0137384_10689330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300012359\|Ga0137385_10148458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2063	Open in IMG/M
3300012532\|Ga0137373_10671303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300012532\|Ga0137373_11317428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012938\|Ga0162651_100016144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300012975\|Ga0134110_10306950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300012975\|Ga0134110_10440547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300012977\|Ga0134087_10371456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300012977\|Ga0134087_10438023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300012977\|Ga0134087_10544175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300015077\|Ga0173483_10640807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300015357\|Ga0134072_10250098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300015358\|Ga0134089_10536727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300018027\|Ga0184605_10154581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300018027\|Ga0184605_10374711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300018061\|Ga0184619_10125859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1162	Open in IMG/M
3300018071\|Ga0184618_10042588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1618	Open in IMG/M
3300018433\|Ga0066667_10180834	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1527	Open in IMG/M
3300018433\|Ga0066667_10911604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300019867\|Ga0193704_1081750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300019869\|Ga0193705_1018901	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1501	Open in IMG/M
3300021080\|Ga0210382_10280683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300021344\|Ga0193719_10043766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1939	Open in IMG/M
3300021344\|Ga0193719_10466163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300021415\|Ga0193694_1029743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300022756\|Ga0222622_10048918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2376	Open in IMG/M
3300022756\|Ga0222622_10732016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300025913\|Ga0207695_11036093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300028708\|Ga0307295_10225888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300028711\|Ga0307293_10009255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2718	Open in IMG/M
3300028715\|Ga0307313_10165805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300028715\|Ga0307313_10174952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300028716\|Ga0307311_10267629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300028718\|Ga0307307_10163594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300028718\|Ga0307307_10205651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300028720\|Ga0307317_10074573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300028720\|Ga0307317_10172188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300028722\|Ga0307319_10138409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300028744\|Ga0307318_10326809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300028787\|Ga0307323_10211094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300028796\|Ga0307287_10002645	All Organisms → cellular organisms → Bacteria	5825	Open in IMG/M
3300028796\|Ga0307287_10073070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300028807\|Ga0307305_10363632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300028810\|Ga0307294_10071877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300028811\|Ga0307292_10402037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300028814\|Ga0307302_10044885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2051	Open in IMG/M
3300028819\|Ga0307296_10261267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300028819\|Ga0307296_10264056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300028828\|Ga0307312_10107819	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300028828\|Ga0307312_10561499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300028876\|Ga0307286_10372806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300028881\|Ga0307277_10255747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300028885\|Ga0307304_10078001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1285	Open in IMG/M
3300028885\|Ga0307304_10134024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300031099\|Ga0308181_1105688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300031421\|Ga0308194_10187223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300031938\|Ga0308175_101823637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.29%
Aquatic	Environmental → Aquatic	6.80%
Plants	Host-Associated → Plants	2.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.38%
Sediment	Environmental → Aquatic → Sediment	5.83%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.91%
Loam	Environmental → Terrestrial → Soil → Loam	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.88%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_09584540	2124908045	Soil	MAPELPKPDVRPQLRELLAWYDDVLGRIAAGALVAPGVAERLSEERDFTARLLELLDAGEESSQATE
JGI10216J12902_1008070492	3300000956	Soil	MAPELPKPDVRPQLRELVAWYDDVLGRITAGALVAPGVAERLSEERDFTARFLEFLDAGEQGSQATE*
JGI10216J12902_1012179661	3300000956	Soil	MAPEFPKPDIRPQLRELLAWYDDVLGRIAAGALVSPGVAERLREEQKSTARYLDLLDAGEESSQTTE*
JGI10216J12902_1024532301	3300000956	Soil	PQLRELLAWYDDVLQRIASGALVEPGLAERLSEEREFAARHLELLDTGEENLQATE*
JGI10216J12902_1034288533	3300000956	Soil	VAPELPKPDIRPQLRELLAWYDDVLERIAAGALVEPGRAERLSEEREFAARHLELLDAAEKGWPATE*
JGI10216J12902_1071699181	3300000956	Soil	PELPKPDIRPQLRELLAWYDDVLQRIAAGALVEPGVVERLSEEREFATRHLELLDADEESPQATE*
JGI10216J12902_1144577612	3300000956	Soil	MAPELPKPDVRPQLRELLAWYDDVLGRIVAGALVAPGVAERLGEERDFTARFLEFLDAGEQSSQATE*
Ga0062594_1004042843	3300005093	Soil	MAPERSKPDIRPQLREMLAWYDDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDVGEESSQTTE*
Ga0066685_107036291	3300005180	Soil	VAPELPKPDIRPQLRELLVWYDDVLQRIASGALVEPGVAEHVTEEREFAARHLELLDADEGPRDMDEA*
Ga0070691_103225331	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAPERSKPDIRPQLREMLAWYDDVLERIAAGALVGPGVAEHLREEQNLTARYLDLLDVGEESSQTTE*
Ga0070674_1018229121	3300005356	Miscanthus Rhizosphere	RPQLREMLAWYDDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDVGEESSQTTE*
Ga0070708_1000759343	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAPELPKPDVRPQLRELLAWYDDVLQRIASGALVEPGVAEHLSEEREFAARHLELLDAGEESRQVTE*
Ga0066682_101139931	3300005450	Soil	MAPELPKPDVRPQLRELLAWYDDVLGRIAAGALVAPGVAQRLSEERDFTARFLELLDAGEQSSQAME*
Ga0066695_103150823	3300005553	Soil	VAPELRKPDIRPQLRELLAWYEDVLERIASGALVEPGVAERLAEEQEFTARYLEFLDAGEEITQATE*
Ga0066693_100228005	3300005566	Soil	VAPELTKPDIRPQLRKLVEWYDDVLERIASGALVEPGVAERLKEQREFAARHLELLETDEESSQATE*
Ga0066694_104243062	3300005574	Soil	VAPELRKPDIRPQLRELLAWYEDVLERIASGALVETGVAERLAEEQEFTARYLEFLDAGEEITQATE*
Ga0081455_107153621	3300005937	Tabebuia Heterophylla Rhizosphere	MAPELPKPDVRPQPRELLAWYDDVLGRIAAGALVAPGVAERLSEERDFTVRFLELLDAGEESSQATE*
Ga0066710_1015210053	3300009012	Grasslands Soil	VAPELRKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERVSEEREVAARHLELLDADEESPQTTE
Ga0066709_1008299532	3300009137	Grasslands Soil	VAPELPKPDIRPQLRELLAWYDDVLQRIAAGALVEPGVAERLSEEREFTARHLELLDADEESSPAAE*
Ga0066709_1028160011	3300009137	Grasslands Soil	MAPELAKPDIRPQLREMLAWYDDVLARIAAGALVGPGVAERLREEQNLTARYLDLLDAGE
Ga0126307_100692102	3300009789	Serpentine Soil	MAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALAGPGVAERLREEQNLTARYLELLDAGEESSQGTE*
Ga0126313_102894221	3300009840	Serpentine Soil	MSPELPKPDVRPQLRELVAWYDDVLGRVAAGALVAPGVAERLGEERDFSARLLELLDAAEESSKATE*
Ga0126308_104350382	3300010040	Serpentine Soil	MAPELPKPDIRPQLRELLAWYDDVLGRIAAGALVAPDLAERLAEEQDFTARYLELLDAGEESSQGTE*
Ga0126314_103281221	3300010042	Serpentine Soil	MAPDLPKPGIRPQLRELLAWYDDVLGRIAAGALAGPGVAERLREEQNLTARYLELLDAGEESSQGTE*
Ga0134088_105411061	3300010304	Grasslands Soil	VAPELSKPDLRPQLRELLAWYDDVLGRIAAGALVAPGVAERLGKERDFTARYLELLDAGVESSQATDQ*
Ga0134084_103856761	3300010322	Grasslands Soil	MAPDLPKPDIRPQLRELLAWYADVLERIASGALVEPGVAERLSEERELAARHLELLDADEESPQATE*
Ga0134065_101384281	3300010326	Grasslands Soil	VAPELPKPDIRPQLRKLVEWYDDVLERIASGALVEPGVAERLSDEREFTARHLELLDADEESLQATE*
Ga0138513_1000099581	3300011000	Soil	MAPELPKPDIRPQLREMLAWYDDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDVGEESSEATE*
Ga0138514_1001600872	3300011003	Soil	MAPEFPKPDIRPQLRELLAWYDDVLERIASGALVEPGAAERLSEEQEFAARHLELLDADEESSPAAESA*
Ga0137364_105547411	3300012198	Vadose Zone Soil	MAPELPKPDIRPQLRELLAWYEDVLERIASGALVEPGVAERLSEEQEFAARHLELLDADEESPQATE*
Ga0137365_103448482	3300012201	Vadose Zone Soil	VAPELSKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERVSEEQEFAARHLELLDADEEGPQATE*
Ga0137374_100413813	3300012204	Vadose Zone Soil	MAPELAKPDVRPHLRELLAWYDDVLGRIAAGALVAPGVAERLGEERDLELLDTGEQSPQAAE*
Ga0137374_103903382	3300012204	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERLSDEREFTARHLELLDADEESLQARE*
Ga0137380_100915954	3300012206	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERVSEEQEFAARHLELLDADEEGPQATE*
Ga0137380_101692773	3300012206	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWHEDVLQRIASGALVEPGVAERLSEEREFTARHLELLDADEESPQATE*
Ga0137381_100911755	3300012207	Vadose Zone Soil	VVAPELPKPDIRPQLRELLAWHEDVLQRIASGALVEPGVAERLSEEREFTARHLELLDADEESPQATE*
Ga0137376_101956484	3300012208	Vadose Zone Soil	VAPELPKPDIRPQLRELLVWYDDVLQRIASGALVEPGVAEHVTEEREFAARHLELLDADEGPRDMD
Ga0137377_105841492	3300012211	Vadose Zone Soil	MAPELAKPDIRPQLREMLAWYDDVLGRIAAGALVGPGVAEHLREEQNLTARYLDLLDAGEETSQATE*
Ga0137372_100152806	3300012350	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYEDVLQRIGSGALVEPGVAERLAEEQEFTARYLEFLDAGEEITQATE*
Ga0137372_102391872	3300012350	Vadose Zone Soil	VAPEFPKPDIRPQLRELLAWYEDVLERIASGALVEPGMAERLSEEREFAARHLELLDAHEESPQATG*
Ga0137372_102772622	3300012350	Vadose Zone Soil	VAPELSKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERVSEEREFAARHLELLDADEESPQATE*
Ga0137372_103762711	3300012350	Vadose Zone Soil	MAPELAKPDVRPHLRELLAWYDDVLGRIAAGALVAPGVAERLSEERDFTARLLELLDAGEQSPQATE*
Ga0137367_102475922	3300012353	Vadose Zone Soil	VKAALGSALDSCKMAPELPKPDIRPQLREMLAWYDDVLGRIADGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE*
Ga0137371_100992622	3300012356	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYDDVLQRIAPRALVEPGMAERLCDEREFTARHLELLDADEESLQAKE*
Ga0137371_105239811	3300012356	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYEDVLERIAAGALVEPGIAERVSEEREFAARHLELLDADEESPQATE*
Ga0137384_103341472	3300012357	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYEDVLQRIASGALLEPGVAERLSEEREFTARHLELLDADEESPQATE*
Ga0137384_106893301	3300012357	Vadose Zone Soil	PRWAVSAPGRRLLPVAPELPKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERVSEEQEFAARHLELLDADEEGPQATE*
Ga0137385_101484581	3300012359	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERVSEEQEFAARHLELLDADEESPQATE*
Ga0137373_106713032	3300012532	Vadose Zone Soil	VAPELPKPDIRPQLRELLAWYEDVLQRIGSGALVEPGVAERVSEEREFAARHLELLDAGEEITQATE*
Ga0137373_113174281	3300012532	Vadose Zone Soil	KRSLEREVEAALGSVRRLRQMAPELPKPDIRPQLREMLAWYDDVLGRIADGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE*
Ga0162651_1000161443	3300012938	Soil	MAPELPKPDIRPQLREMRAWYDDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDSGEERSQAPE*
Ga0134110_103069501	3300012975	Grasslands Soil	VAPELPKPDIRPQLRERLAWYDDVLQRIASGALVEPGVVEHLSEEREFAARHLELLDADEESRQAME*
Ga0134110_104405471	3300012975	Grasslands Soil	VAPELPKPDIRPQLRELLAWYDDVLERIASGALVEPGVAERVSEEREFAARHLELLDADEESPQAAE*
Ga0134087_103714562	3300012977	Grasslands Soil	VAPELPKPDIRPQLRVLLVWYDDVLQRIASGALVEPGVAEHVTEEREFAARHLELLDADEESPQATE*
Ga0134087_104380231	3300012977	Grasslands Soil	MAPELPKPDIRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQSLTARYLDLLDAGEESSQLAE*
Ga0134087_105441752	3300012977	Grasslands Soil	VAPELRKPDIRPQLRELLAWYEDVLERIASGALVEPGVAERLTDEREFTARHLELLDADEESPQATE*
Ga0173483_106408072	3300015077	Soil	RQMAPELPKPDIRPQLREMLAWYDDVLERIAAGALVEPGVAERLREEQNLTARYLDLLDAGEKSSQATD*
Ga0134072_102500981	3300015357	Grasslands Soil	MRVAPELPKPDIRPQLRELLVWYDDVLQRIASGALVEPGVAEHVTEEREFAARHLELLDADEEITQVTE*
Ga0134089_105367271	3300015358	Grasslands Soil	MAPELPKPDIRPQLRELLAWYEDVLKRIASGALVEPGIAERLSEEREFAARHLELLDADEESPQATE*
Ga0184605_101545812	3300018027	Groundwater Sediment	VAPELPKPDIRPQLRELLAWYEDVLQRIASGALVEPGVAERLSEEREFAARHLELLDADEESPQATE
Ga0184605_103747111	3300018027	Groundwater Sediment	VAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEESSQATE
Ga0184619_101258592	3300018061	Groundwater Sediment	MAPELPKPDIRPQLREMLAWYDDVLGRIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESQQAKE
Ga0184618_100425883	3300018071	Groundwater Sediment	VAPEFPKPDIRPQLRELLAWYDDVLQRIGSGALVEPGVAERLTEEQEFAARHLELLDADEGPREMDEA
Ga0066667_101808342	3300018433	Grasslands Soil	VAPELPKPDIRPQLRELLVWYDDVLQRIASGALVEPGVAEHVTEEREFAARHLELLDADEGPRDMDEA
Ga0066667_109116042	3300018433	Grasslands Soil	MAPELPKPDIRPQLRELLAWYDDVLQRIASGALVEPGVAERLSEEREFTARHLELLDADEESSPATE
Ga0193704_10817502	3300019867	Soil	IRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEESSQATE
Ga0193705_10189011	3300019869	Soil	KQACFEKRPRLQQMAPELPKPDIRPQLREMLAWYEDVLGRIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE
Ga0210382_102806832	3300021080	Groundwater Sediment	MAPEFAKPDIRPQLREMLAWYDDVLGRIAAGALVGPGVAERLREEQNLTARYLDLLDAGEGTSQATE
Ga0193719_100437663	3300021344	Soil	VAPDLPKPDIRPQLRELLAWYEEVLARIASGALVEPGLAERLSEERELAARHLELLDADAESREAVE
Ga0193719_104661632	3300021344	Soil	RRLRDASVHSRQVAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEESSQATE
Ga0193694_10297432	3300021415	Soil	MAPDLPKPDIRPQLRELLAWYEDVLERIASGALVEPGVVERLSEERELAARHLELLDADEESPAATE
Ga0222622_100489182	3300022756	Groundwater Sediment	MAPELPKPDIRPQLREMLAWYEDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQPTE
Ga0222622_107320161	3300022756	Groundwater Sediment	WAASAPGRRLLPVAPDLPKPDIRPQLRELLAWYEEVLARIASGALVEPGLAERLSEERELAARHLELLDADAESREAVE
Ga0207695_110360932	3300025913	Corn Rhizosphere	MAPERSKPDIRPQLREMLAWYDDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDVGEESSQTTE
Ga0307295_102258881	3300028708	Soil	MAPEHQKPDIRPQLREMLAWYADVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQPTE
Ga0307293_100092553	3300028711	Soil	MAPELPKPDIRPQLRELLAWYDDVLQRIASGALVEPGLAGRLSEEQEFAARHLELLDADEEGRQATE
Ga0307313_101658051	3300028715	Soil	MAPELPKPDIRPQLREMLAWYADVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQTTE
Ga0307313_101749522	3300028715	Soil	VAPELPKPDIRPQLRELLAWYEDVLERIASGALVEPGVVERLSEERELAARHLELLDADEESPAATE
Ga0307311_102676292	3300028716	Soil	MAPELPKPDIRPQLRELLAWYEDVLQRIASGALVEPGVAERLSEEREFTARHLELLDADEESSPTTE
Ga0307307_101635943	3300028718	Soil	MAPEFPKPDIRPQLRELLAWYDDVLERIASGALVEPGAAERLSEEQEFAARHLELLDADEESSPAAE
Ga0307307_102056512	3300028718	Soil	MAPELPKPDIRPQLRELLAWYEDVLERIASGALVEPGVAERLSEERELAARHLELLDADEESPQATE
Ga0307317_100745731	3300028720	Soil	QFCSVRRLRQMAPELQKPDIRPQLREMLAWYADVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE
Ga0307317_101721881	3300028720	Soil	IRPQLRELLAWYEDVLQRIASGALVEPGVAERLSEEREFTARHLELLDADEESSPTTE
Ga0307319_101384091	3300028722	Soil	DASVHSRQVAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEESSQATE
Ga0307318_103268092	3300028744	Soil	VAPELPKPDIRPQLRELLAWYEDVLQRIASGALVEPGVVEHLSEEREFAARHLELLDAHEESRRPLGEQGPIGLG
Ga0307323_102110942	3300028787	Soil	MAPELPKPDIRPQLREMLAWYEDVLGRIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE
Ga0307287_100026451	3300028796	Soil	MAPELQKPDIRPQLREMLAWYADVLERIAAGALVGPGVAERLREEQNLTARYLDL
Ga0307287_100730701	3300028796	Soil	ELQKPDIRPQLREMLAWYADVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEKSSQATE
Ga0307305_103636321	3300028807	Soil	MAPEFPKPDIRPQLRELLAWYDDVLERIASGALVEPGAAERLSEEQEFAARHLELLDADE
Ga0307294_100718771	3300028810	Soil	LPKPDIRPQLRELLAWYEDVLERIASGALVEPGVVERLSEERELAARHLELLDADEESPAATE
Ga0307292_104020371	3300028811	Soil	MAPEFPKPDIRPQLRELLAWYDDVLERIASGALVEPGAAERLSEEQEFAARHLELLDADEESSLAAE
Ga0307302_100448852	3300028814	Soil	MAPELQKPDIRPQLREMLAWYGDVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE
Ga0307296_102612672	3300028819	Soil	VAPELPKPDIRPQLRELLAWYEDVLQRIASGALVEPGVAERLSEEREFTARHLELLDADEESPQATE
Ga0307296_102640561	3300028819	Soil	YTPGRLAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEESSQATE
Ga0307312_101078191	3300028828	Soil	MAPEFPKPDIRPQLRELLAWYDDVLERIASGALVEPGVAERLSEEQEFAARHLELLDADEESSPAAE
Ga0307312_105614991	3300028828	Soil	QLRELLAWYDDVLARIAAGALVAPGVAERLGEERDFTARYLELLDAGEESSQATGQ
Ga0307286_103728062	3300028876	Soil	ATSRQFCSVRRLRQMAPELQKPDIRPQLREMLAWYADVLERIAAGALVGPGVAERLREEQNLTARYLDLLDAGEESSQATE
Ga0307277_102557472	3300028881	Soil	MAPELPKPDIRPQLRELLAWYEDVLERIASGALVEPGVAERLAEEQEFTARYLEFLDAGEESSPATE
Ga0307304_100780012	3300028885	Soil	RRLRDASVHSQQVAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEESSQATE
Ga0307304_101340241	3300028885	Soil	MAPDLPKPDIRPQLRELLAWYEDVLERIASGALVEPGVVERLSEERELAARHLELLDADAESREAVE
Ga0308181_11056881	3300031099	Soil	MAPDLPKPDIRPQLRELLAWYDDVLGRIAAGALVAPGLAERLAEEQDFTARYLELLD
Ga0308194_101872232	3300031421	Soil	VAPEFPKPDIRPQLRELLAWYDDVLQRIASGALVEPGLAGRLSEEQEFAARHLELLDADEEGRQATE
Ga0308175_1018236371	3300031938	Soil	MAPELPKPDIRPQLREMLAWYDGVLGRIAAGALVGPGVAERLREEQNLAARYLDLLDAGEENSQAAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098588

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences