Metagenome Family F098560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098560
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	90 residues
Representative Sequence	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Number of Associated Samples	73
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	40.78 %
% of genes from short scaffolds (< 2000 bps)	74.76 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (65.049 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (31.068 % of family members)
Environment Ontology (ENVO)	Unclassified (62.136 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.165 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1Water_10002741 2JGI25907J50239_10528672 3Ga0049081_100405273 4Ga0049085_102318752 5Ga0049084_103118221 6Ga0114973_101512413 7Ga0114973_101769192 8Ga0114980_102234932 9Ga0114968_100578675 10Ga0114968_102989392 11Ga0114977_103276403 12Ga0114978_103798961 13Ga0114981_100867932 14Ga0114966_101709383 15Ga0114970_106859992 16Ga0114970_107086302 17Ga0114975_100846492 18Ga0114979_101827483 19Ga0114974_104148152 20Ga0114976_100455115 21Ga0114971_102020962 22Ga0153800_10079673 23Ga0164293_100999522 24Ga0181350_10850371 25Ga0181347_10318352 26Ga0181347_11010181 27Ga0181362_10291271 28Ga0181365_11447582 29Ga0181352_11057531 30Ga0181352_11140541 31Ga0181344_10873301 32Ga0181356_10676182 33Ga0181356_10823131 34Ga0181358_10692193 35Ga0181358_11623351 36Ga0181349_10712693 37Ga0181349_11702412 38Ga0181346_10874551 39Ga0181348_11659751 40Ga0181355_11524221 41Ga0181359_10257533 42Ga0222714_100040953 43Ga0222714_104577822 44Ga0222713_101275531 45Ga0222713_101631213 46Ga0222712_100413784 47Ga0222712_101463435 48Ga0181354_11658692 49Ga0244775_114751051 50Ga0208974_10019369 51Ga0208942_101052210 52Ga0209087_11309132 53Ga0209190_100231030 54Ga0209190_11908511 55Ga0209190_12150123 56Ga0209596_10141179 57Ga0209596_10162993 58Ga0209596_10225888 59Ga0209296_10066377 60Ga0209296_10417315 61Ga0209088_100044822 62Ga0209088_100309131 63Ga0209829_100049406 64Ga0209500_100521125 65Ga0209107_102355432 66Ga0209353_102702712 67Ga0209353_103390062 68Ga0209354_100584301 69Ga0209191_11182462 70Ga0209401_13376631 71Ga0209299_11641233 72Ga0315291_103476922 73Ga0315293_104445361 74Ga0315293_106427182 75Ga0315290_111144831 76Ga0315285_108393121 77Ga0315294_104030242 78Ga0315294_106891151 79Ga0315294_110261611 80Ga0315294_110858332 81Ga0315294_113605121 82Ga0315278_106421241 83Ga0315274_106497483 84Ga0315274_111358701 85Ga0315272_100524002 86Ga0315272_101461302 87Ga0315289_112344502 88Ga0315284_115350542 89Ga0315277_111433361 90Ga0315283_101797613 91Ga0315268_105085302 92Ga0315271_100395283 93Ga0315271_104093851 94Ga0315271_104810102 95Ga0315287_107264551 96Ga0315287_124639251 97Ga0315275_109807042 98Ga0315273_113775471 99Ga0315273_122806891 100Ga0334722_102461543 101Ga0334722_104507131 102Ga0334979_0170817_1_246 103Ga0334990_0059962_500_787
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1Water_10002741 2Ga0049085_102318752 3Ga0049084_103118221 4Ga0181350_10850371 5Ga0209296_10066377
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1Water_10002741 2Ga0049085_102318752 3Ga0049084_103118221 4Ga0181350_10850371 5Ga0209296_10066377
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13489	Methyltransf_23	0.97
PF11397	GlcNAc	0.97
PF03237	Terminase_6N	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	34.95 %
Unclassified	root	N/A	65.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.88 %
Unclassified	root	N/A	65.05 %
Viruses	superkingdom	All Organisms → Viruses	31.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.88 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	31.07 %
Unclassified	root	N/A	65.05 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	31.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %
Unclassified	root	N/A	65.05 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Unclassified	root	N/A	65.05 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	31.07 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31.07 %
Unclassified	root	N/A	65.05 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	31.07 %
Unclassified	root	N/A	65.05 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Unclassified	root	N/A	65.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	31.07 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002930\|Water_100027	Not Available	36571	Open in IMG/M
3300003394\|JGI25907J50239_1052867	Not Available	824	Open in IMG/M
3300005581\|Ga0049081_10040527	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1768	Open in IMG/M
3300005583\|Ga0049085_10231875	Not Available	607	Open in IMG/M
3300005585\|Ga0049084_10311822	Not Available	521	Open in IMG/M
3300009068\|Ga0114973_10151241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1290	Open in IMG/M
3300009068\|Ga0114973_10176919	Not Available	1175	Open in IMG/M
3300009152\|Ga0114980_10223493	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1103	Open in IMG/M
3300009155\|Ga0114968_10057867	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2472	Open in IMG/M
3300009155\|Ga0114968_10298939	Not Available	900	Open in IMG/M

Showing 1 to 10 of 99 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.23%
Marine	Environmental → Aquatic → Marine	7.77%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.97%
Lake	Environmental → Aquatic → Freshwater → Lake	64.08%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.80%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.97%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	29.13%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	34.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	27.18%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.80%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.97%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.83%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.97%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	31.07%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	22.33%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	29.13%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M

Showing 1 to 10 of 73 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Water_10002741	3300002930	Estuary Water	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDTELKMIINHRKARKASLVAPAQSTPAPGVTHAATPVLGA*
JGI25907J50239_10528672	3300003394	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKXRKAAAAAPAQSTPAPGVTHAATPVLGA*
Ga0049081_100405273	3300005581	Freshwater Lentic	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKTRKAAAAAPAQSTPAPGVSHAATPVLGA*
Ga0049085_102318752	3300005583	Freshwater Lentic	MKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIA
Ga0049084_103118221	3300005585	Freshwater Lentic	MKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQPAPAPGVTHAATPVL
Ga0114973_101512413	3300009068	Freshwater Lake	MKIEMKRPNKQMADSIETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGITHAATPVLGA*
Ga0114973_101769192	3300009068	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKIQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPALGVTHAATPVLGA*
Ga0114980_102234932	3300009152	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGVTHAATPVLGA*
Ga0114968_100578675	3300009155	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPAQSTPAPGVTHAATPVLGA*
Ga0114968_102989392	3300009155	Freshwater Lake	MKIEMKRPNKEMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASAAAPAQSTPTPGVTHAATPVLGA*
Ga0114977_103276403	3300009158	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPTPGVNHAATPVLGA*
Ga0114978_103798961	3300009159	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAALAQPAPAPGVTHAATPVLGA*
Ga0114981_100867932	3300009160	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGVTHAATPVLGA*
Ga0114966_101709383	3300009161	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA*
Ga0114970_106859992	3300009163	Freshwater Lake	QMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPAQSTPAPGVTHAATPVLGA*
Ga0114970_107086302	3300009163	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASLAALAQSTPAPGVTHAATPVLGA*
Ga0114975_100846492	3300009164	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPSQSTPAPGVTHAATPVLGA*
Ga0114979_101827483	3300009180	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGVTHAATPVL
Ga0114974_104148152	3300009183	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDGELKMIINHRKTRKAAAAAPAQSTPAPGVTHAATPVLGA*
Ga0114976_100455115	3300009184	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPTPGVNHAATPVLGA*
Ga0114971_102020962	3300009185	Freshwater Lake	MKIEMKRPNKEMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKTRKAAAAAPAQSTPAPGVTHAATPVLGA*
Ga0153800_10079673	3300011995	Freshwater	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA*
Ga0164293_100999522	3300013004	Freshwater	MKIEMKRPNKEMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA*
Ga0181350_10850371	3300017716	Freshwater Lake	MKIEMKRPNKGMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAALKMIIDHRKARKAAIADLTAVAALAQ
Ga0181347_10318352	3300017722	Freshwater Lake	MKIEMKCPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181347_11010181	3300017722	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELQMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181362_10291271	3300017723	Freshwater Lake	QMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181365_11447582	3300017736	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMGSDAELKMIINHRKARKAAIADLA
Ga0181352_11057531	3300017747	Freshwater Lake	RPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181352_11140541	3300017747	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQP
Ga0181344_10873301	3300017754	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKLIINHRK
Ga0181356_10676182	3300017761	Freshwater Lake	EMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181356_10823131	3300017761	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKAR
Ga0181358_10692193	3300017774	Freshwater Lake	ADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181358_11623351	3300017774	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASPAAPAQSTPAPGVTHAATPVLG
Ga0181349_10712693	3300017778	Freshwater Lake	EMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181349_11702412	3300017778	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASPAAPAQSTPAPGVTHAATPVLGA
Ga0181346_10874551	3300017780	Freshwater Lake	PMKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181348_11659751	3300017784	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKTRKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0181355_11524221	3300017785	Freshwater Lake	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAASAQSTPAPGVTH
Ga0181359_10257533	3300019784	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0222714_100040953	3300021961	Estuarine Water	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASPAAVAALAQSTPAPGITHAATPVLGA
Ga0222714_104577822	3300021961	Estuarine Water	MKIEMKRPNKQMAENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKA
Ga0222713_101275531	3300021962	Estuarine Water	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASPAASAQSTPAPGVTHA
Ga0222713_101631213	3300021962	Estuarine Water	MKRPNKQMAENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQSTPAPGITHAATPVLGA
Ga0222712_100413784	3300021963	Estuarine Water	MKIEMKRPNKQMAENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQSTPAPGITHAATPVLGA
Ga0222712_101463435	3300021963	Estuarine Water	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASPAAVAA
Ga0181354_11658692	3300022190	Freshwater Lake	MKIEMKRPNKQMADSIETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQPAPAPG
Ga0244775_114751051	3300024346	Estuarine	MKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQPAPA
Ga0208974_10019369	3300027608	Freshwater Lentic	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKTRKAAAAAPAQSTPAPGVSHAATPVLGA
Ga0208942_101052210	3300027627	Freshwater Lentic	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQSAP
Ga0209087_11309132	3300027734	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPTPGVNHAATPVLGA
Ga0209190_100231030	3300027736	Freshwater Lake	MKIEMKRPNKQMADSIETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGITHAATPVLGA
Ga0209190_11908511	3300027736	Freshwater Lake	EMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPTPGVTHAATPVLGA
Ga0209190_12150123	3300027736	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKTRKAAAAAPAQSTPAPGVTHAATPVLAA
Ga0209596_10141179	3300027754	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPAQSTPAPGVTHAATPVLGA
Ga0209596_10162993	3300027754	Freshwater Lake	MKIEMKRPNKEMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASAAAPAQSTPTPGVTHAATPVLGA
Ga0209596_10225888	3300027754	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0209296_10066377	3300027759	Freshwater Lake	TMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGVTHAATPVLGA
Ga0209296_10417315	3300027759	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDVELKMIINHRKARKASSAA
Ga0209088_100044822	3300027763	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSAAPSQSTPAPGVTHAATPVLGA
Ga0209088_100309131	3300027763	Freshwater Lake	MKIEMKRPNKQMADNVETMLNVNAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAALAQPAPAPGVTHAATPVLGA
Ga0209829_100049406	3300027777	Freshwater Lake	MKIEMKRPNKEMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDVELKMIINHRKARKAAIADLAVVAALAQPAPAPGVTHAATPVLGA
Ga0209500_100521125	3300027782	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAALAQPAPAPGVTHAATPVLGA
Ga0209107_102355432	3300027797	Freshwater And Sediment	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0209353_102702712	3300027798	Freshwater Lake	DFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAAPAQSTPAPGVTHAATPVLGA
Ga0209353_103390062	3300027798	Freshwater Lake	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARK
Ga0209354_100584301	3300027808	Freshwater Lake	KQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0209191_11182462	3300027969	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPSQSTPAPGVTHAATPVLGA
Ga0209401_13376631	3300027971	Freshwater Lake	PMKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPALGVTHAATPVLGA
Ga0209299_11641233	3300027974	Freshwater Lake	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKASSA
Ga0315291_103476922	3300031707	Sediment	MKIEMKRPNKQMADNIETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKTAIADLAAVAALAQPAPAPGVTHAATPVLGA
Ga0315293_104445361	3300031746	Sediment	MKIEMKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKTAIADLA
Ga0315293_106427182	3300031746	Sediment	AKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQPAPAPSVTHAATPVLGA
Ga0315290_111144831	3300031834	Sediment	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPA
Ga0315285_108393121	3300031885	Sediment	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVT
Ga0315294_104030242	3300031952	Sediment	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQPAPAPSVTHAATPVLGA
Ga0315294_106891151	3300031952	Sediment	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKA
Ga0315294_110261611	3300031952	Sediment	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVVALAQPAPAP
Ga0315294_110858332	3300031952	Sediment	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDVELKMIINHRKARKAAIADLAAVAALAQPAPAPGVTHAATPVL
Ga0315294_113605121	3300031952	Sediment	MKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKTAIADLAAVAALAQPAPAPGVTHAATPVVGA
Ga0315278_106421241	3300031997	Sediment	MKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0315274_106497483	3300031999	Sediment	MKIEMKRPNKQMADNIETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0315274_111358701	3300031999	Sediment	MKRPNKQMADNVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQPTLAPGITHAATPVLGA
Ga0315272_100524002	3300032018	Sediment	MKIEMKRPNKQMADNIETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAAVAALAQPAPTPGVTHAATPVLRA
Ga0315272_101461302	3300032018	Sediment	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAALAQSTPEPGVTHAATPVLGA
Ga0315289_112344502	3300032046	Sediment	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDVELKMIINHRKARKAAIADLAAVAALAQPAP
Ga0315284_115350542	3300032053	Sediment	MKRPNKQMADNIETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARK
Ga0315277_111433361	3300032118	Sediment	MKRPNKQMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQSTPAPGVTHAATPVLGA
Ga0315283_101797613	3300032164	Sediment	MKIEMKRPNKQMCENVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDVELKMIINHRKARKTAIADLAAVAALAQPAPAPGVTHAATPVLGA
Ga0315268_105085302	3300032173	Sediment	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPSVTHAATPVLGA
Ga0315271_100395283	3300032256	Sediment	MKIEMKRPNKQMADSIETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0315271_104093851	3300032256	Sediment	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQS
Ga0315271_104810102	3300032256	Sediment	MKIEMKRPNKQMADNIEIMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQSTPAPGVTHAATPVLGA
Ga0315287_107264551	3300032397	Sediment	DFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQPAPAPSVTHAATPVLGA
Ga0315287_124639251	3300032397	Sediment	MKRPNKQMADNIETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA
Ga0315275_109807042	3300032401	Sediment	MKIEMKRPNKQMCENVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQPAPAPSVTHAATPVLGA
Ga0315273_113775471	3300032516	Sediment	MKIEMKRPNKEMADSIETMLNDFVKISTIARNLKTQVVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPA
Ga0315273_122806891	3300032516	Sediment	MKRPNKQMADNVETMLNDFVKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKTAIADLAAVAALAQPAPAPGVTHAATPVVGA
Ga0334722_102461543	3300033233	Sediment	MKIEMKRPNKQMADNIEIMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAIADLAVVAALAQPAPAPSVTHAATPVLGA
Ga0334722_104507131	3300033233	Sediment	MKIEMKRPNKQMADSIETMLNDFAKISTIARTLKTQMVTVYRYISYLKYTKVMVSDAELKMIINHRKARKAAAAAPAQST
Ga0334979_0170817_1_246	3300033996	Freshwater	MKIEMKRPNKEMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPA
Ga0334990_0059962_500_787	3300034068	Freshwater	MKIEMKRPNKEMADNVETMLNDFAKISTIARTLKTQMVTVYRYISYLQYTKVMVSDAELKMIINHRKARKAAAAAPAQSTPAPGVTHAATPVLGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098560

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences