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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F098557 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 103 |
| Average Sequence Length | 58 residues |
| Representative Sequence | LAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Number of Associated Samples | 55 |
| Number of Associated Scaffolds | 78 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 55.34 % |
| % of genes near scaffold ends (potentially truncated) | 43.69 % |
| % of genes from short scaffolds (< 2000 bps) | 100.00 % |
| Associated GOLD sequencing projects | 47 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (64.078 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (44.660 % of family members) |
| Environment Ontology (ENVO) | Unclassified (75.728 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (100.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 8.47% β-sheet: 32.20% Coil/Unstructured: 59.32% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 78 Family Scaffolds |
|---|---|---|
| PF02954 | HTH_8 | 3.85 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 64.08 % |
| Unclassified | root | N/A | 35.92 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300001353|JGI20159J14440_10116380 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae | 819 | Open in IMG/M |
| 3300009071|Ga0115566_10369488 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 832 | Open in IMG/M |
| 3300009071|Ga0115566_10369488 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 832 | Open in IMG/M |
| 3300009071|Ga0115566_10401864 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 790 | Open in IMG/M |
| 3300009071|Ga0115566_10401864 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 790 | Open in IMG/M |
| 3300009071|Ga0115566_10401864 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 790 | Open in IMG/M |
| 3300009071|Ga0115566_10811505 | Not Available | 514 | Open in IMG/M |
| 3300009074|Ga0115549_1093922 | Not Available | 1010 | Open in IMG/M |
| 3300009074|Ga0115549_1093922 | Not Available | 1010 | Open in IMG/M |
| 3300009074|Ga0115549_1218709 | Not Available | 606 | Open in IMG/M |
| 3300009076|Ga0115550_1243760 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 591 | Open in IMG/M |
| 3300009077|Ga0115552_1198779 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 823 | Open in IMG/M |
| 3300009433|Ga0115545_1247763 | Not Available | 599 | Open in IMG/M |
| 3300009434|Ga0115562_1242823 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 630 | Open in IMG/M |
| 3300009434|Ga0115562_1318585 | Not Available | 530 | Open in IMG/M |
| 3300009434|Ga0115562_1332696 | Not Available | 516 | Open in IMG/M |
| 3300009435|Ga0115546_1113409 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 976 | Open in IMG/M |
| 3300009435|Ga0115546_1328019 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 521 | Open in IMG/M |
| 3300009437|Ga0115556_1346402 | Not Available | 522 | Open in IMG/M |
| 3300009440|Ga0115561_1323116 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 568 | Open in IMG/M |
| 3300009440|Ga0115561_1323116 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 568 | Open in IMG/M |
| 3300009445|Ga0115553_1369581 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 547 | Open in IMG/M |
| 3300009449|Ga0115558_1206264 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 808 | Open in IMG/M |
| 3300009467|Ga0115565_10253562 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 804 | Open in IMG/M |
| 3300009472|Ga0115554_1424171 | Not Available | 519 | Open in IMG/M |
| 3300009476|Ga0115555_1453850 | Not Available | 508 | Open in IMG/M |
| 3300009498|Ga0115568_10267386 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 765 | Open in IMG/M |
| 3300009498|Ga0115568_10267386 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 765 | Open in IMG/M |
| 3300009498|Ga0115568_10337056 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 661 | Open in IMG/M |
| 3300016745|Ga0182093_1520069 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Pseudoruegeria → unclassified Pseudoruegeria → Pseudoruegeria sp. HB172150 | 633 | Open in IMG/M |
| 3300016791|Ga0182095_1299604 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 504 | Open in IMG/M |
| 3300017950|Ga0181607_10499901 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 650 | Open in IMG/M |
| 3300018036|Ga0181600_10287600 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 832 | Open in IMG/M |
| 3300018036|Ga0181600_10603355 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 512 | Open in IMG/M |
| 3300018041|Ga0181601_10433382 | Not Available | 696 | Open in IMG/M |
| 3300018041|Ga0181601_10433382 | Not Available | 696 | Open in IMG/M |
| 3300018048|Ga0181606_10229279 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1061 | Open in IMG/M |
| 3300018048|Ga0181606_10229279 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1061 | Open in IMG/M |
| 3300018048|Ga0181606_10229279 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1061 | Open in IMG/M |
| 3300018048|Ga0181606_10671280 | Not Available | 527 | Open in IMG/M |
| 3300018048|Ga0181606_10671280 | Not Available | 527 | Open in IMG/M |
| 3300019261|Ga0182097_1415609 | Not Available | 660 | Open in IMG/M |
| 3300020053|Ga0181595_10239396 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae | 774 | Open in IMG/M |
| 3300020053|Ga0181595_10239396 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae | 774 | Open in IMG/M |
| 3300020169|Ga0206127_1208005 | Not Available | 704 | Open in IMG/M |
| 3300020169|Ga0206127_1265394 | Not Available | 586 | Open in IMG/M |
| 3300020169|Ga0206127_1323010 | Not Available | 506 | Open in IMG/M |
| 3300020173|Ga0181602_10356526 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 587 | Open in IMG/M |
| 3300020173|Ga0181602_10356526 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 587 | Open in IMG/M |
| 3300020174|Ga0181603_10299869 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 621 | Open in IMG/M |
| 3300020182|Ga0206129_10369134 | Not Available | 550 | Open in IMG/M |
| 3300020182|Ga0206129_10369134 | Not Available | 550 | Open in IMG/M |
| 3300020182|Ga0206129_10414634 | Not Available | 503 | Open in IMG/M |
| 3300020185|Ga0206131_10320436 | All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium | 683 | Open in IMG/M |
| 3300020187|Ga0206130_10139680 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1296 | Open in IMG/M |
| 3300020188|Ga0181605_10423704 | Not Available | 522 | Open in IMG/M |
| 3300020194|Ga0181597_10189560 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 1008 | Open in IMG/M |
| 3300020194|Ga0181597_10189560 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 1008 | Open in IMG/M |
| 3300020595|Ga0206126_10404323 | Not Available | 601 | Open in IMG/M |
| 3300020595|Ga0206126_10404323 | Not Available | 601 | Open in IMG/M |
| 3300021375|Ga0213869_10214474 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 860 | Open in IMG/M |
| 3300021375|Ga0213869_10214474 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 860 | Open in IMG/M |
| 3300022921|Ga0255765_1317305 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 611 | Open in IMG/M |
| 3300022926|Ga0255753_1287478 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 643 | Open in IMG/M |
| 3300025577|Ga0209304_1060496 | All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium | 959 | Open in IMG/M |
| 3300025608|Ga0209654_1089752 | All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium | 845 | Open in IMG/M |
| 3300025640|Ga0209198_1199768 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 509 | Open in IMG/M |
| 3300025685|Ga0209095_1104397 | All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium | 886 | Open in IMG/M |
| 3300025685|Ga0209095_1181635 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 592 | Open in IMG/M |
| 3300025690|Ga0209505_1087190 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 914 | Open in IMG/M |
| 3300025690|Ga0209505_1087190 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 914 | Open in IMG/M |
| 3300025690|Ga0209505_1131420 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae | 681 | Open in IMG/M |
| 3300025690|Ga0209505_1135985 | Not Available | 665 | Open in IMG/M |
| 3300025694|Ga0209406_1105802 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 946 | Open in IMG/M |
| 3300025694|Ga0209406_1105802 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 946 | Open in IMG/M |
| 3300025696|Ga0209532_1120133 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 864 | Open in IMG/M |
| 3300025696|Ga0209532_1120133 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 864 | Open in IMG/M |
| 3300025699|Ga0209715_1189252 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 655 | Open in IMG/M |
| 3300025712|Ga0209305_1225041 | Not Available | 541 | Open in IMG/M |
| 3300025767|Ga0209137_1227093 | Not Available | 610 | Open in IMG/M |
| 3300025767|Ga0209137_1245600 | Not Available | 572 | Open in IMG/M |
| 3300025767|Ga0209137_1245600 | Not Available | 572 | Open in IMG/M |
| 3300025809|Ga0209199_1144287 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 899 | Open in IMG/M |
| 3300025822|Ga0209714_1179003 | Not Available | 520 | Open in IMG/M |
| 3300025869|Ga0209308_10261571 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 738 | Open in IMG/M |
| 3300025869|Ga0209308_10445412 | Not Available | 508 | Open in IMG/M |
| 3300025880|Ga0209534_10310120 | Not Available | 722 | Open in IMG/M |
| 3300025880|Ga0209534_10310120 | Not Available | 722 | Open in IMG/M |
| 3300025880|Ga0209534_10477911 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 518 | Open in IMG/M |
| 3300025880|Ga0209534_10477911 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 518 | Open in IMG/M |
| 3300025880|Ga0209534_10486402 | Not Available | 511 | Open in IMG/M |
| 3300025881|Ga0209309_10076884 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1883 | Open in IMG/M |
| 3300025881|Ga0209309_10354210 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 645 | Open in IMG/M |
| 3300025890|Ga0209631_10275793 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 826 | Open in IMG/M |
| 3300025890|Ga0209631_10275793 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 826 | Open in IMG/M |
| 3300025892|Ga0209630_10435936 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 557 | Open in IMG/M |
| 3300025894|Ga0209335_10240273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 804 | Open in IMG/M |
| 3300025894|Ga0209335_10240273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 804 | Open in IMG/M |
| 3300025894|Ga0209335_10240620 | Not Available | 803 | Open in IMG/M |
| 3300025894|Ga0209335_10240620 | Not Available | 803 | Open in IMG/M |
| 3300025894|Ga0209335_10310693 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 667 | Open in IMG/M |
| 3300025894|Ga0209335_10430570 | Not Available | 522 | Open in IMG/M |
| 3300025897|Ga0209425_10342319 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae | 733 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 44.66% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 22.33% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 17.48% |
| Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 9.71% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 3.88% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 1.94% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001353 | Pelagic Microbial community sample from North Sea - COGITO 998_met_09 | Environmental | Open in IMG/M |
| 3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
| 3300009074 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 | Environmental | Open in IMG/M |
| 3300009076 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 | Environmental | Open in IMG/M |
| 3300009077 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 | Environmental | Open in IMG/M |
| 3300009433 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 | Environmental | Open in IMG/M |
| 3300009434 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 | Environmental | Open in IMG/M |
| 3300009435 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 | Environmental | Open in IMG/M |
| 3300009437 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 | Environmental | Open in IMG/M |
| 3300009440 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 | Environmental | Open in IMG/M |
| 3300009445 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 | Environmental | Open in IMG/M |
| 3300009449 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 | Environmental | Open in IMG/M |
| 3300009467 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 | Environmental | Open in IMG/M |
| 3300009472 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 | Environmental | Open in IMG/M |
| 3300009476 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 | Environmental | Open in IMG/M |
| 3300009498 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 | Environmental | Open in IMG/M |
| 3300016745 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300016791 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300017950 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018036 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018041 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018048 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300019261 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413BS (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020053 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020169 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1 | Environmental | Open in IMG/M |
| 3300020173 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020174 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020182 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2 | Environmental | Open in IMG/M |
| 3300020185 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1 | Environmental | Open in IMG/M |
| 3300020187 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1 | Environmental | Open in IMG/M |
| 3300020188 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020194 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020595 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1 | Environmental | Open in IMG/M |
| 3300021375 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132 | Environmental | Open in IMG/M |
| 3300022921 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG | Environmental | Open in IMG/M |
| 3300022926 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG | Environmental | Open in IMG/M |
| 3300025577 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes) | Environmental | Open in IMG/M |
| 3300025608 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025640 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes) | Environmental | Open in IMG/M |
| 3300025685 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes) | Environmental | Open in IMG/M |
| 3300025690 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes) | Environmental | Open in IMG/M |
| 3300025694 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes) | Environmental | Open in IMG/M |
| 3300025696 | Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes) | Environmental | Open in IMG/M |
| 3300025699 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes) | Environmental | Open in IMG/M |
| 3300025712 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes) | Environmental | Open in IMG/M |
| 3300025767 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025809 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes) | Environmental | Open in IMG/M |
| 3300025822 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes) | Environmental | Open in IMG/M |
| 3300025869 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes) | Environmental | Open in IMG/M |
| 3300025880 | Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes) | Environmental | Open in IMG/M |
| 3300025881 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes) | Environmental | Open in IMG/M |
| 3300025890 | Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes) | Environmental | Open in IMG/M |
| 3300025892 | Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes) | Environmental | Open in IMG/M |
| 3300025894 | Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes) | Environmental | Open in IMG/M |
| 3300025897 | Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI20159J14440_101163802 | 3300001353 | Pelagic Marine | LAGAVIVTVTELALDCVPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLRETVVPEV* |
| Ga0115566_103694881 | 3300009071 | Pelagic Marine | MTVTVLELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAADVSLRATVVPEV* |
| Ga0115566_103694882 | 3300009071 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKMRLRSASPAIIAGAVNVGLAADTSLRATVVPEVWVQA* |
| Ga0115566_104018641 | 3300009071 | Pelagic Marine | LAGAVIVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPE |
| Ga0115566_104018642 | 3300009071 | Pelagic Marine | LAGAVIVTVTELLLVLVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRATVVPEV* |
| Ga0115566_104018643 | 3300009071 | Pelagic Marine | EATGALLLAVGAVTVTVTELALELVPSLTVTEKRRLRSASPIAMAGAVNVGLAADVSLRATAVPEV* |
| Ga0115566_108115051 | 3300009071 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKMRLRSASPIAIAGAVNVGLAADVSLRATVVPEV* |
| Ga0115549_10939221 | 3300009074 | Pelagic Marine | LLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWVQT* |
| Ga0115549_10939222 | 3300009074 | Pelagic Marine | LAGAVIVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEA* |
| Ga0115549_12187091 | 3300009074 | Pelagic Marine | MVTELLLVLVPSLTVTEKTRLRSVSPIAIAGTVNVGLAADASLRATVVPEV* |
| Ga0115550_12437601 | 3300009076 | Pelagic Marine | AVTVTVTELALKLVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPEV* |
| Ga0115552_11987791 | 3300009077 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKTRLRSASPAIIAGAVNVGLAADASLRATVVPEV* |
| Ga0115545_12477631 | 3300009433 | Pelagic Marine | LLAVGAVTVTVTGLALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLREIVVPDV |
| Ga0115562_12428232 | 3300009434 | Pelagic Marine | VTVTELALDCVPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLRETVVPEV* |
| Ga0115562_13185852 | 3300009434 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKMRLRAASPIAIAGAVNVGLAADVSLRATVVPEV* |
| Ga0115562_13326961 | 3300009434 | Pelagic Marine | LAVGAVTVTVTELEFVNKPSLTVIKNTIFRFASPVAIAGAVNVGLAADASLR |
| Ga0115546_11134092 | 3300009435 | Pelagic Marine | LLAVGAVTVMVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEV |
| Ga0115546_13280191 | 3300009435 | Pelagic Marine | ATGVAKLAGAVIVTVTELALDWVPSLTVTEKTRLRSASPATIAGAVNVGLAADASLRATVVPEV* |
| Ga0115556_13464022 | 3300009437 | Pelagic Marine | LAGAVIVTVTELLSVLVPSLTVTEKMRLRSASPAIIAGAVNVGLAADVSLRATVVPEA* |
| Ga0115561_13231161 | 3300009440 | Pelagic Marine | AVTVTVTELLSELVPSLTVTEKTRLRSASPIAMAGAVNVGLTADVSLRETVVPDV* |
| Ga0115561_13231162 | 3300009440 | Pelagic Marine | LLLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPEV* |
| Ga0115553_13695811 | 3300009445 | Pelagic Marine | MVTALEVVNTPSLTVTKNTMLRSASPIAMAGAVNVGLIADVSLRETVVPEV* |
| Ga0115558_12062641 | 3300009449 | Pelagic Marine | MVPELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPEA* |
| Ga0115565_102535622 | 3300009467 | Pelagic Marine | LLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPDV |
| Ga0115554_14241711 | 3300009472 | Pelagic Marine | MVTELLLVLVPSLTVTEKTRLRSASPIAIAGVVNVGLAADASLRATVVPEV* |
| Ga0115555_14538502 | 3300009476 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKMRLRSASPAIIAGAVNVGLAADTSL |
| Ga0115568_102673861 | 3300009498 | Pelagic Marine | LAGAVIVTVTELALDWLPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLKATVVPEV* |
| Ga0115568_102673862 | 3300009498 | Pelagic Marine | MVTELLLVLVPSLTVTEKTRLRSVSPIAMAGAVNVGLIADVSLRETVVPEV* |
| Ga0115568_103370562 | 3300009498 | Pelagic Marine | LLAVGAVTVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWVQA* |
| Ga0182093_15200692 | 3300016745 | Salt Marsh | LAVGAVTVTVTELALLLVPSLTVTEKTRLRSASPIAMAGAVNVGLAADASLRATVVPEV |
| Ga0182095_12996041 | 3300016791 | Salt Marsh | LLAVGAVTVTVTELALDWVPALTMEEKTRLRSASPIAMAGAVNVGLTADVSLRETVVPDVWVQA |
| Ga0181607_104999013 | 3300017950 | Salt Marsh | VTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Ga0181600_102876002 | 3300018036 | Salt Marsh | LLAVGAVTVMVTELLLVLVPSLTVTEKTRLRSASPIAMAGAVNVGLTADVSLRETVVPDV |
| Ga0181600_106033551 | 3300018036 | Salt Marsh | LLAVGAVTVTVTELALDCVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPEVWVQA |
| Ga0181601_104333821 | 3300018041 | Salt Marsh | LAGAVIVTVTELLSVLVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRATVVPEVWFQA |
| Ga0181601_104333822 | 3300018041 | Salt Marsh | LAGAVIVTVTELAVDWLPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLRETVVPEV |
| Ga0181606_102292791 | 3300018048 | Salt Marsh | LAGAVIVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRVTVVPEV |
| Ga0181606_102292793 | 3300018048 | Salt Marsh | LAVGAVTVMVTELLLVLVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Ga0181606_102292794 | 3300018048 | Salt Marsh | VTVTVTELLLVLVPSLTVTEKTRLRSASPAIIAGAVNVGLAADASLRATVVPEV |
| Ga0181606_106712801 | 3300018048 | Salt Marsh | LAGAVIVTVTELLSELVPSLTVTEKARLRSASPAVIAGAVNVGLAADASLRATVVPEV |
| Ga0181606_106712802 | 3300018048 | Salt Marsh | APAEATGVAKLAGAVIVTVTELALDWVSSLMVTEKMRLRSASPAIIAGAVNVGLAADVSLRTTVVPEV |
| Ga0182097_14156091 | 3300019261 | Salt Marsh | LLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRATVVPEV |
| Ga0181595_102393961 | 3300020053 | Salt Marsh | LAVGAATVTVTELALDCVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASL |
| Ga0181595_102393963 | 3300020053 | Salt Marsh | AEATGALLLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Ga0206127_12080051 | 3300020169 | Seawater | LLAVGAATVTVTELALDCVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPDV |
| Ga0206127_12653942 | 3300020169 | Seawater | LLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEV |
| Ga0206127_13230101 | 3300020169 | Seawater | LAVGAVTVTVTELEFVNKPSLTVIKNTIFRFASPVAIAGAVNVGLAADVSLRTT |
| Ga0181602_103565261 | 3300020173 | Salt Marsh | LLAVGAVTVMVTALEVVNTPSLTVTKNTMLRSASPIAMAGAVNVGLIADVSLRETVVPEV |
| Ga0181602_103565262 | 3300020173 | Salt Marsh | IVTVTELALDWVPSLMVTEKMRLRSASPIAIAGAVNVGLAADASLRATVVPEV |
| Ga0181603_102998693 | 3300020174 | Salt Marsh | AVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Ga0206129_103691341 | 3300020182 | Seawater | VGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWFQ |
| Ga0206129_103691342 | 3300020182 | Seawater | LAGAVIVTVTELALDWLPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLKATVVPEV |
| Ga0206129_104146342 | 3300020182 | Seawater | LAGAVIVTVTELALDCVPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLRETVVPEV |
| Ga0206131_103204361 | 3300020185 | Seawater | LAVGAVTVTVTELALELVPSLTVTENTRLRSASPIAMAGAVNVGLAADVSLRE |
| Ga0206130_101396802 | 3300020187 | Seawater | LLAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWFQA |
| Ga0181605_104237042 | 3300020188 | Salt Marsh | LAVGAVTVTVMELALELVPSLTVTEKRRLRSASPIAMAGAVNVGLAADVSLRATAVP |
| Ga0181597_101895601 | 3300020194 | Salt Marsh | LAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Ga0181597_101895603 | 3300020194 | Salt Marsh | LAGAVIVTVTELLSELVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRATVVPEV |
| Ga0206126_104043231 | 3300020595 | Seawater | LAGAVIVTVTELLSVLVPSLTVTEKMRLRSASPAIIAGAVNVGLAADTSL |
| Ga0206126_104043232 | 3300020595 | Seawater | LLAVGAVTVTVTELLSELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWVQA |
| Ga0213869_102144742 | 3300021375 | Seawater | LLAVGAVTVTVTELEFVNKPSLTVIKNTIFRFASPVAIAGAVNVGLAADASLRATVVPEV |
| Ga0213869_102144743 | 3300021375 | Seawater | LLAVGAVTVTVTELALELVPSLTVTEKRRLRSASPIAMAGAVNVGLAADVSLRATVVPEV |
| Ga0255765_13173052 | 3300022921 | Salt Marsh | LLAVGAVTVTVTELEFVNKPSLTVIKNTIFRFVSPVAIAGAVNAGLAADVSLRTTVVPDV |
| Ga0255753_12874781 | 3300022926 | Salt Marsh | LLAVGAVTVTVTELEFVNKPSLTVIKNTIFRFASPVAIAGAVNVGLAADASLRATVVPEVWVQA |
| Ga0209304_10604964 | 3300025577 | Pelagic Marine | LAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVW |
| Ga0209654_10897521 | 3300025608 | Marine | LAVGAVTVTVTELALELVPSLTVTENTRLRSASPIAMAGAVNVGLTADVS |
| Ga0209198_11997681 | 3300025640 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKMRLRSASPIAIAGAVNVGLAADASLRATVVPEV |
| Ga0209095_11043974 | 3300025685 | Pelagic Marine | LAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADV |
| Ga0209095_11816352 | 3300025685 | Pelagic Marine | LAVGAMTVTVTELLSELVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPDV |
| Ga0209505_10871902 | 3300025690 | Pelagic Marine | LAVGAVTVMVTELLLVLVPSLTVTEKTRLRSVSPIAMAGAVNVGLIADVSLRETVVPEV |
| Ga0209505_10871903 | 3300025690 | Pelagic Marine | EATGVAKLAGAVIVTVTELALDWVPSLMVTEKTRLRSASPAIIAGAVNVGLAADASLRATVVPEV |
| Ga0209505_11314201 | 3300025690 | Pelagic Marine | LAGAVIVTVTELLSVLVPSLTVTEKMRLRSASPAIIAGAVNVGLAADVSLRATVVPEA |
| Ga0209505_11359851 | 3300025690 | Pelagic Marine | AMTVMVTELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAAAASLRTTVAGPYRVQA |
| Ga0209406_11058022 | 3300025694 | Pelagic Marine | LAGAVIVTVTELALDWVPSLMVTEKMRLRSASPAIIAGAVNVGLAADTSLRATVVPEVWVQT |
| Ga0209406_11058023 | 3300025694 | Pelagic Marine | LLAVGAVTVTVTELALDWVPSLTVTEKTRLRSVSPIAMAGAVKVGLTADVSLRETVVPDV |
| Ga0209532_11201331 | 3300025696 | Pelagic Marine | LAVGAVTVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLTADVSLRE |
| Ga0209532_11201333 | 3300025696 | Pelagic Marine | LLAVGAVTVTVTELLSVLVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWVQA |
| Ga0209715_11892521 | 3300025699 | Pelagic Marine | VIVTVTELALDWVPSLMVTEKMRLRSASPIAIAGAVNVGLAADASLRATVVPEV |
| Ga0209305_12250411 | 3300025712 | Pelagic Marine | LAVGAATVMVTELLLVLVPSLTVTEKTRLRSASPIAIAGTVNVGLAADASL |
| Ga0209137_12270932 | 3300025767 | Marine | LAVGAVTVMVTELLLVLVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEV |
| Ga0209137_12456001 | 3300025767 | Marine | LAGAVIVTVTELALDCVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRATVVPEV |
| Ga0209137_12456002 | 3300025767 | Marine | LAGAVIVTVTELALELVPSLTVTEKTRLRSASPAIIAGAVNVGLAADASLRATVVPEVWVQA |
| Ga0209199_11442873 | 3300025809 | Pelagic Marine | LAVGAVTVTVTELALELVPSLTVTEKTRLRSASPIAIAGAVNVGLAADVSLR |
| Ga0209714_11790031 | 3300025822 | Pelagic Marine | LAVGAMTVMVPELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAAAASLRTTVAG |
| Ga0209308_102615713 | 3300025869 | Pelagic Marine | GAVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWFQA |
| Ga0209308_104454122 | 3300025869 | Pelagic Marine | LAVGAMTVMVTELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAAAASLRTTVAG |
| Ga0209534_103101202 | 3300025880 | Pelagic Marine | LLAVGAATVTVTELALDCVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRATVVPEV |
| Ga0209534_103101203 | 3300025880 | Pelagic Marine | LAGAVIVTVTELLSELVPSLTVTEKTRLRSASPAIIAGAVNVGLAADVSLRTTVVPEV |
| Ga0209534_104779111 | 3300025880 | Pelagic Marine | LLAVGAVTVTVTELALDWVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPDV |
| Ga0209534_104779112 | 3300025880 | Pelagic Marine | GVAKLAGAVIVTVTELALDWLPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLKATVVPEV |
| Ga0209534_104864021 | 3300025880 | Pelagic Marine | LAGAVIVTVTELALDCVPSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLRETVGP |
| Ga0209309_100768841 | 3300025881 | Pelagic Marine | LLAVGAVTVTVTELALAWVPSLTVTEKTRLRSASPIAMAGAVNVGLTADVSLRETVVPDV |
| Ga0209309_103542102 | 3300025881 | Pelagic Marine | LLAVGAVTVTVTELLSELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEV |
| Ga0209631_102757932 | 3300025890 | Pelagic Marine | LAVGAMTVMVTELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAAAASLRTTVAGPYRVQA |
| Ga0209631_102757933 | 3300025890 | Pelagic Marine | LAVGAVTVTVTELALELVPSLTVTEKRRLRSASPIAMAGAVNVGLTADVSLRATV |
| Ga0209630_104359362 | 3300025892 | Pelagic Marine | AVTVTVTELALELVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRETVVPEV |
| Ga0209335_102402731 | 3300025894 | Pelagic Marine | LAVGAVTVTVTELEFVNKPSLTVIKNTIFRFASPVAIAGAVNVGLAADASLRATVVPEV |
| Ga0209335_102402733 | 3300025894 | Pelagic Marine | PADATGVAKLAGAVIVTVTELALDWVPSLMVTEKMRLRAASPIAIAGAVNVGLAADVSLRATVVPEV |
| Ga0209335_102406202 | 3300025894 | Pelagic Marine | LAVGAMTVMVTELLSVLVPSLTVTEKTRLRSASPIAIAGAVNVGLAADASLRATVVPDV |
| Ga0209335_102406203 | 3300025894 | Pelagic Marine | LAGAVIVTVTELALDWVPSLTVTEKTRLRSASPATIAGAVNVGLAADASLRATVVPEV |
| Ga0209335_103106932 | 3300025894 | Pelagic Marine | LAGAVIVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEA |
| Ga0209335_104305702 | 3300025894 | Pelagic Marine | LLAVGAVTVTVTELALDWVPSLTVTEKTRLRSASPIAMAGAVNVGLAADVSLRATVVPEVWVQA |
| Ga0209425_103423191 | 3300025897 | Pelagic Marine | AEATGVAKLAGAVTVTVTELALDWLLSLTVTEKTRLRSASPAIIAGAVNVGLIADVSLKATVVPEV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |