Metagenome Family F098540

Overview

Basic Information

• Family ID: F098540
• Family Type: Metagenome
• Number of Sequences: 103
• Average Sequence Length: 57 residues
• Representative Sequence: MSSWRSSNVDEMVLATFAKKGPLLPKEEAHWRVLSVVGFVVVREAFVGMELYGDFFR
• Number of Associated Samples: 52
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 70.00 %
• % of genes near scaffold ends (potentially truncated): 31.07 %
• % of genes from short scaffolds (< 2000 bps): 87.38 %
• Associated GOLD sequencing projects: 52
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (88.350 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (96.117 % of family members)
• Environment Ontology (ENVO): Unclassified (97.087 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant surface (97.087 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.24%
  β-sheet: 0.00%
  Coil/Unstructured: 51.76%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF03947	Ribosomal_L2_C	9.71
PF04195	Transposase_28	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0090	Ribosomal protein L2	Translation, ribosomal structure and biogenesis [J]	9.71

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
All Organisms	root	All Organisms	11.65 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
cellular organisms	root	All Organisms → cellular organisms	11.65 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	11.65 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	10.68 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	10.68 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	10.68 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	10.68 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.94 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.94 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.94 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.94 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.94 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	1.94 %

Level 14

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	1.94 %

Level 15

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	1.94 %

Level 16

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	1.94 %

Level 17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1.94 %

Level 18

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	0.97 %

Level 19

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	0.97 %

Level 20

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	0.97 %

Level 21

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.35 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	0.97 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300013297|Ga0157378_12226569	Not Available	599
3300013297|Ga0157378_12855488	Not Available	535
3300015268|Ga0182154_1011001	Not Available	837
3300015274|Ga0182188_1010218	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	798
3300015274|Ga0182188_1019185	Not Available	683
3300015274|Ga0182188_1019612	Not Available	679
3300015275|Ga0182172_1036734	Not Available	623
3300015277|Ga0182128_1042917	Not Available	602
3300015277|Ga0182128_1071430	Not Available	519
3300015282|Ga0182124_1025656	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	699
3300015283|Ga0182156_1041251	Not Available	628
3300015283|Ga0182156_1070946	Not Available	537
3300015286|Ga0182176_1026418	Not Available	726
3300015286|Ga0182176_1067124	Not Available	544
3300015287|Ga0182171_1086612	Not Available	505
3300015288|Ga0182173_1041910	Not Available	621
3300015289|Ga0182138_1075414	Not Available	529
3300015291|Ga0182125_1014372	Not Available	859
3300015294|Ga0182126_1097180	Not Available	500
3300015295|Ga0182175_1016696	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	839
3300015296|Ga0182157_1041023	Not Available	663
3300015302|Ga0182143_1054041	Not Available	615
3300015304|Ga0182112_1081685	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	545
3300015308|Ga0182142_1027206	Not Available	774
3300015321|Ga0182127_1044064	Not Available	694
3300015341|Ga0182187_1045334	Not Available	844
3300015341|Ga0182187_1092801	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	662
3300015341|Ga0182187_1169823	Not Available	534
3300015343|Ga0182155_1161083	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	570
3300015343|Ga0182155_1222334	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	504
3300015344|Ga0182189_1023266	Not Available	1122
3300015344|Ga0182189_1058680	Not Available	827
3300015344|Ga0182189_1060284	Not Available	819
3300015344|Ga0182189_1097038	Not Available	692
3300015344|Ga0182189_1154916	Not Available	584
3300015344|Ga0182189_1165165	Not Available	570
3300015344|Ga0182189_1178075	Not Available	554
3300015345|Ga0182111_1069581	Not Available	808
3300015345|Ga0182111_1108971	Not Available	686
3300015347|Ga0182177_1085760	Not Available	753
3300015347|Ga0182177_1126844	Not Available	651
3300015347|Ga0182177_1154302	Not Available	605
3300015351|Ga0182161_1189581	Not Available	578
3300015355|Ga0182159_1174441	Not Available	681
3300015355|Ga0182159_1212471	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	626
3300015361|Ga0182145_1091180	Not Available	648
3300017404|Ga0182203_1085912	Not Available	621
3300017404|Ga0182203_1160225	Not Available	506
3300017407|Ga0182220_1009106	Not Available	978
3300017407|Ga0182220_1059536	Not Available	596
3300017407|Ga0182220_1082125	All Organisms → cellular organisms → Eukaryota	545
3300017409|Ga0182204_1117126	Not Available	505
3300017410|Ga0182207_1037827	Not Available	832
3300017410|Ga0182207_1044063	Not Available	793
3300017410|Ga0182207_1129408	Not Available	559
3300017411|Ga0182208_1088832	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	567
3300017411|Ga0182208_1092226	Not Available	560
3300017413|Ga0182222_1032654	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	686
3300017413|Ga0182222_1054074	Not Available	603
3300017413|Ga0182222_1062820	Not Available	580
3300017415|Ga0182202_1137690	Not Available	504
3300017420|Ga0182228_1096451	Not Available	559
3300017424|Ga0182219_1032501	Not Available	792
3300017424|Ga0182219_1061382	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	650
3300017425|Ga0182224_1153437	Not Available	515
3300017427|Ga0182190_1087222	Not Available	626
3300017430|Ga0182192_1101991	Not Available	605
3300017430|Ga0182192_1151978	Not Available	526
3300017430|Ga0182192_1167433	Not Available	508
3300017433|Ga0182206_1056355	Not Available	699
3300017433|Ga0182206_1090172	Not Available	604
3300017433|Ga0182206_1154738	Not Available	507
3300017436|Ga0182209_1137959	Not Available	542
3300017438|Ga0182191_1065923	Not Available	707
3300017438|Ga0182191_1139758	Not Available	551
3300017443|Ga0182193_1070234	Not Available	715
3300017443|Ga0182193_1113628	Not Available	609
3300017443|Ga0182193_1195887	Not Available	503
3300017683|Ga0182218_1153253	Not Available	503
3300017684|Ga0182225_1015498	Not Available	1015
3300017684|Ga0182225_1064115	Not Available	647
3300017685|Ga0182227_1084468	Not Available	602
3300017685|Ga0182227_1091426	Not Available	584
3300017685|Ga0182227_1132876	Not Available	507
3300017686|Ga0182205_1159599	Not Available	515
3300017690|Ga0182223_1004723	Not Available	1212
3300017690|Ga0182223_1037868	Not Available	697
3300017690|Ga0182223_1083950	Not Available	562
3300017690|Ga0182223_1094777	Not Available	543
3300021060|Ga0182232_1076071	Not Available	547

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Category

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	97.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.91%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	97.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.91%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	97.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.91%

Habitat

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	96.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105243_114625271	3300009148	Miscanthus Rhizosphere	MSSLEVPNVDEMVLAAFAEKGLVPPKEVAHWRVLYVIGFVTICEAFTGMEPYVDSFW*
Ga0157378_122265691	3300013297	Miscanthus Rhizosphere	MSSWRSSNVDEMVLAAFAEKGPLLPKEEAHWRVVSVIGSIVVHEAFVGMEPYGDLFCQIFSRRALLV
Ga0157378_128554882	3300013297	Miscanthus Rhizosphere	MSSWRSSNVDEIVLAAFVEKGPLSPKEEAHWRVLHVIGFVTIYEAFVGMEPYEDFLR*
Ga0182154_10110012	3300015268	Miscanthus Phyllosphere	TMSSWRSSNIDEMVLATFAKKGPLLLKEEAHWRVLHIVGFVPACEAFVGMEPYGDLFR*
Ga0182188_10102181	3300015274	Miscanthus Phyllosphere	MSSWRSSSIDEVVLAAFTEMGLLPPKEEAHWRVLHIVGFITICEAFVGMEPHVDSFWQIFYGRVL
Ga0182188_10191851	3300015274	Miscanthus Phyllosphere	MSSWRSSNVDEVVLAAFAKKGPLPPKEEAHWKVLHVASFVAVCEAFIGMEPYRNLFR*
Ga0182188_10196121	3300015274	Miscanthus Phyllosphere	MSSWRSSNIDEMVLAAFAEKGPLPPKEEVHWRVLRIIGFVVVCEAFL
Ga0182172_10367341	3300015275	Miscanthus Phyllosphere	MLSWRSSNIDEMVLAAFIEKGPLLPKEEVNWRVLSVVGFAVIRDAFVRMEPYGKPFR*
Ga0182128_10429171	3300015277	Miscanthus Phyllosphere	AMSSWRSSNVDEMVLAAFAKKGPLLPKEEAHWRVPSVFDFVVVHKAFVGMEPYGDLF*
Ga0182128_10714301	3300015277	Miscanthus Phyllosphere	MSSWRSSSVDEVVLAAFAKKGLLPPKEVAHWRVLHVAGFVTVYEAFFRMEQHVDSFR*
Ga0182124_10256561	3300015282	Miscanthus Phyllosphere	MSSWRLSNIDEMVLAAFTKKGPLLPKEETHWRVLSVIGFVIICEAFVRIEPYKNLFR*
Ga0182156_10412511	3300015283	Miscanthus Phyllosphere	MSSKRSSNVDEMVLATFAEKGPLPPKDEAHWRVPHVTGFVPAYEAFVRMEPYRDLFR*
Ga0182156_10709462	3300015283	Miscanthus Phyllosphere	MSSWRLSNIDEMVSTTFAEKGPLPPKEEAHWRVLRVADFVAVCEAFIEMEPYRDLFR*
Ga0182176_10264181	3300015286	Miscanthus Phyllosphere	MLSWRSSNIDEMVLAAFAEKGPLPSKEEAHWKVLSVVGFVVVREAFVRMDPYKGLLW*
Ga0182176_10671241	3300015286	Miscanthus Phyllosphere	MLSWRSSNIDEMVLAAFIEKGLLSPKEMAHWRVLNVAGFITIYEAFIEMEP
Ga0182171_10866122	3300015287	Miscanthus Phyllosphere	MLSWRSSNVDEMVSAAFTKKGPLPPKEEVHWRALSVVGFAVVREAFVGVEPYAPHP
Ga0182173_10419101	3300015288	Miscanthus Phyllosphere	MSSWRSFNVDEMVLSAFAKKGPLPPKEEAHWRVLSVVGFVIVHKAFIGMDLYGGLLR*
Ga0182138_10754141	3300015289	Miscanthus Phyllosphere	MSSWRSSNVDEMVLAAFAEKWLVLPKEVAHWRVPYVASFVTVCEAFVGMEPYVDSFR*
Ga0182125_10143721	3300015291	Miscanthus Phyllosphere	MSSWRSSNIDEMGSAAFAEKGPLPPKEEAHWRVLSVVGFVIVPEAFVGMDPYGGLLR*
Ga0182126_10971801	3300015294	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFAEKGPLLLKEQAHWRVLSIVSFAVVHEASIGMEPYGK
Ga0182175_10166961	3300015295	Miscanthus Phyllosphere	VMSSWRSSNIDEMVLATFAKKGPPPPKEQAHWRVLHVAGFVTICEAFVEMEPYRDFFR*
Ga0182157_10410231	3300015296	Miscanthus Phyllosphere	DEMVLAALAKNGPLPPKVEAHWRVLHVASFVIVCEAFVGMGSYIDFF*
Ga0182108_11000541	3300015300	Miscanthus Phyllosphere	MSSWRSPNIDEMVLAAFIEKGLVSPKEVAHWKVSYVAGFVTICEAFIGMEPHVDSFW*
Ga0182108_11021982	3300015300	Miscanthus Phyllosphere	MSRWRSSSVDEVVLAAFAKKGLLPPKEVVQWRVLHVTGFVPICEAFIGMEPHVDSF*
Ga0182143_10540412	3300015302	Miscanthus Phyllosphere	RSHNVDEMVLAAFAEKGLLPPKEVVHERGPHVAGFIIVCEAFVRMEPYGDFF*
Ga0182112_10816851	3300015304	Miscanthus Phyllosphere	MSSWRSSNVDEMVSTAFAEKGPLPPKEEAHWRVLSVIGFVVVREAFTGMDPYGGLLWRIFSG*
Ga0182144_10263093	3300015307	Miscanthus Phyllosphere	MVLVAFAEKGPLPPKEEAHWRVLRVAGSVIVGEAFIRMEPYVGFFR*
Ga0182142_10272062	3300015308	Miscanthus Phyllosphere	MSGWRSSNVDEMVSTAFAEKGPLPPKEEVHWRVLSVVGFVIVREAFAGMDPYGGLLWRIFSG*
Ga0182127_10440641	3300015321	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFSEKGLLLSKEEAHWRVLSVIGFVIVREAFIGM
Ga0182187_10453341	3300015341	Miscanthus Phyllosphere	MSGWRSSNIDEIVLATFVEKGPLLLKEELHRRVLSVVGIAIVHEAFVGMEPYGKLF*
Ga0182187_10928012	3300015341	Miscanthus Phyllosphere	MLSWRSSNIDEMVLATFAEKGPLLLKEQAHWRVLSIVSFAVVHEASIGMEPYGKLFR*
Ga0182187_11698232	3300015341	Miscanthus Phyllosphere	MMSSWRSSNIDEMVLAPFAEKGLLLSKEEAHWKVLHVVGFVTVYEAFIGMEPYGDFFR*
Ga0182155_11610832	3300015343	Miscanthus Phyllosphere	MSSWRSSNVDEMVLAAFAEKGPLPPKEEAHWRVLSVVGSTVVREAFVGIEQYGKLFR*
Ga0182155_12223341	3300015343	Miscanthus Phyllosphere	MSSWRSSNVDELVLAAFAEKGPLPPKEEAHWRVLHVIGFVTVCEAFIGIEPYVGLFR*
Ga0182189_10232662	3300015344	Miscanthus Phyllosphere	MLNLRSSNVDEMVLAFFVEKGPLLPKEEAHWRVLSVIGFVVVCEAFVRMEPYGDLFQ*
Ga0182189_10586802	3300015344	Miscanthus Phyllosphere	MLNWRPSNIDEMVLAAFAEKGPLSPKEEAHWRVLHVTGFVTICEVFVGMGPYGDFF*
Ga0182189_10602841	3300015344	Miscanthus Phyllosphere	MSGWRSSNVDEMVLATFAEKGPLPPKEEAHWRVLSVVSFVVVREAFVGMDPYGGLLQ*
Ga0182189_10970381	3300015344	Miscanthus Phyllosphere	MLSWRSSNIDEMVLAAFAEKGLLPPKEVAHWRVLHVAGFVTICEAFIRMEPPMDSIR*
Ga0182189_11549161	3300015344	Miscanthus Phyllosphere	MLSWRSSNVDEMVLAFFAEKGPLPPKEEAHWKVLSVVGFVIVREAFIGMEPYGDLFR*
Ga0182189_11651651	3300015344	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFAEKGPLPPKEEVHWKALHVAGLVPACEAFVGMESYGDCFQ*
Ga0182189_11780751	3300015344	Miscanthus Phyllosphere	MSSWRSSNMDEMVLAAFTEKGPLLPKEEAHWRVLSVIGFVVVCEAFIGMEPYENLFR*
Ga0182111_10695812	3300015345	Miscanthus Phyllosphere	MSSWRSSNIDEMGSAAFAEKGPLPPKEEVHWRVLRIIGFVVVCEAFLGMEPYIGFFW*
Ga0182111_11089711	3300015345	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFAKKGPLPLKEEAYWRVPSIVGFVVVREAF
Ga0182177_10857601	3300015347	Miscanthus Phyllosphere	MSSLRSSNVDEVVLAAFAEKGLLPPKEVVHWRVLQVVGFVTICEAFIGMEPHVDSFR*
Ga0182177_11268441	3300015347	Miscanthus Phyllosphere	MLSWRSSNVDEMVSAAFAEKGPLLSKEEAHWRLLSVIGCVVVREAFVGMEPYGNLS*
Ga0182177_11543021	3300015347	Miscanthus Phyllosphere	MSSWRSSNIDEKESATFVEKGLLSPKEKAHWRVPSVAGFVVVREAFVGMDPYGGLLR*
Ga0182161_10802861	3300015351	Miscanthus Phyllosphere	MSSLRSSNVDEVVLAAFAEKGLVLPKEVAHWRVSYIVGFVIVCEAFIGMEPYVDSFR*
Ga0182161_11895811	3300015351	Miscanthus Phyllosphere	MSSWRSSNVDELVLAAFAEKGPLPPKEVAHWRVLHVTVFITVCGAFIGMVVDSFCRIFSG
Ga0182161_12509931	3300015351	Miscanthus Phyllosphere	MSSWRSPNIDEMVLATFTEKGLVPPKEVAHWRVPYVADLVTVYEAFVGMEPYVDSFRRVISM*
Ga0182159_11744411	3300015355	Miscanthus Phyllosphere	MSSWRSSNVDEMVSAAFADKGPLPREEEAYWRVLSVVGFAVVREAFVGMEPYGKLFRW
Ga0182159_12124711	3300015355	Miscanthus Phyllosphere	MSSWRSSNVDEMVLATFTEKGPLLPKEEAHRKALHVAGFVPACEAFIGMEPYGDLFW*
Ga0182159_12289901	3300015355	Miscanthus Phyllosphere	MSSRRSPNIDEMVLAVFAENGLVPPKEVAHWRVSYVASFVTVCEAFIGMEPLVDSF*
Ga0182145_10911801	3300015361	Miscanthus Phyllosphere	MMSSWRSSNVDEMVSAAFAKKGPLPPKEEAHWRVLRVASFVTVYEAFVGMELYVGFFWRIFSG*
Ga0182203_10859122	3300017404	Miscanthus Phyllosphere	MSSWRSSNIDEMVQAAFAKKGPLPLKEEGHWRVLSVVGFAVVREAFVGMEPYGDFFQRSFSGRAL
Ga0182203_11602251	3300017404	Miscanthus Phyllosphere	MSSWRSSNVDEIMLAAFAEKGPLPPKEEAHWRVLSIVGFVIVLEAFVGMDPYGGLLW
Ga0182220_10091063	3300017407	Miscanthus Phyllosphere	MSSWRLSNVDEMVPAAFAKKEPLSPKEEAHWRVLRVVGFVVVHKAFIGMEPYGDLFW
Ga0182220_10595362	3300017407	Miscanthus Phyllosphere	LSIVDEMVLAAFAEKGPLLPKEEAHWRVLSVVGFVVVRKAFVGMGPYGDFFQ
Ga0182220_10821252	3300017407	Miscanthus Phyllosphere	MSSWRSSNVDEMVLATFAKKGPLLPKEEAHWRVLSVVGFVVVREAFVGMELYGDFFR
Ga0182204_10873491	3300017409	Miscanthus Phyllosphere	MSSWRSPNVDEMVLAAFVEKGLLPPKDVVHWRVLYVAGFVTVCEAFIWMEPYVDSFR
Ga0182204_11171262	3300017409	Miscanthus Phyllosphere	MSSWRSSNVDEVVLAAFAKKGPLPPKEEAHWKVLHVASFVAVCEAFIGMEPYEDLFR
Ga0182207_10378271	3300017410	Miscanthus Phyllosphere	MSSWRSSNVDEMVLAAFAEKGPLPPEEEAQWRVLSVVGFAVVLEAFVGMEPYGKLFW
Ga0182207_10440633	3300017410	Miscanthus Phyllosphere	MSSWRSSNIDEMVLAAFAKKGPLPPKEEAHWRVLSVVGFVVVREAFVRMEPYGNLLW
Ga0182207_11294082	3300017410	Miscanthus Phyllosphere	TMSSWRSSNIDEMVPAAFAEKRPLLPKEEAHWRVLSIVGFVVVYMAFVGMKPYGDLFW
Ga0182208_10888322	3300017411	Miscanthus Phyllosphere	MSSWRSSNVDEMVLAAFTKKGPLSPKEEVHWRVLHVAGFVTVCKAFVGMEPYKDFFR
Ga0182208_10922262	3300017411	Miscanthus Phyllosphere	MSSWRSSNVDEMVLAAFTKKGPLPPKEEAHWRVLRVASFVTVYEAFVGMEPYVGFFWRIFSG
Ga0182222_10326541	3300017413	Miscanthus Phyllosphere	MSSWRSSNVDEMVLAAFAEKGPLPPKEEAHWRVLHVVGFIIVCEAFVRIEPYRDFFL
Ga0182222_10540741	3300017413	Miscanthus Phyllosphere	MSSWRSSNVDEMVLATFVKKGPLPPKEEAHCRVLSVIGFVVVREAFVRME
Ga0182222_10628202	3300017413	Miscanthus Phyllosphere	WRSSNVDEMVLAAFVENGLLPPKEEAHWRVLSIVDFAVVREAFVGMEPYGKLFR
Ga0182222_10638441	3300017413	Miscanthus Phyllosphere	MMSSWRSPNVDEMVLAAFTEKGPVPPKEVAHWSVPYIAGFVTVCEAFVGMEPYVDSFR
Ga0182202_11376902	3300017415	Miscanthus Phyllosphere	MSSWRSTNIDEMVSTAFAEKGPPPPKEEVHWRVLSVVSFAIVCEAFVGMEPYRKLFRRIFSG
Ga0182228_10964511	3300017420	Miscanthus Phyllosphere	MSSWRSSNIDEMVLAAFAKKGSPPPKEEARWRVLHVAGFVTICEVFIG
Ga0182219_10325011	3300017424	Miscanthus Phyllosphere	MLRWRSSNVDEMVLATFVEKGLMLLKEEAHWRVLSVVGFAVVREAFVGMEPYGKLFR
Ga0182219_10613822	3300017424	Miscanthus Phyllosphere	MSSWRSSKVDELVLAAFVEKGLLPPKDVVHWRVLYVAGFVTVCEAFIWMEPYVDSFR
Ga0182219_10661532	3300017424	Miscanthus Phyllosphere	MMSSWRSPNVDEMVLVAFVEKGLVPPKEVAHWRVSYVTSFITVCEAFVGMEPYVYSFR
Ga0182224_11534371	3300017425	Miscanthus Phyllosphere	SWRSSNVDEIVLDAFAQKGPLLLKEEAHWRVLSIISFVVVHEAFVRMEPYGDLFWRIFSG
Ga0182190_10872222	3300017427	Miscanthus Phyllosphere	LSWRSSNVDDMVLAAFAEKGPLPPKEEAHWRVLSVVVFVVVCEAFIGMDLDGGLL
Ga0182192_10881793	3300017430	Miscanthus Phyllosphere	MISSWRSPNVDEMVLAAFAEKGLVPPKEVAHWRVSYVVGFVTVCEAFVGMEPYVDSFRRVFFG
Ga0182192_11019912	3300017430	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFAKKGPLLLKEEAHWRVLHIVGFVPACEAFIGMEPYGDLFW
Ga0182192_11519781	3300017430	Miscanthus Phyllosphere	MSSWRLSNVDEMVSIAFAEKGPLSPKEEAHWRVLSIVAFVIIREAFVRMEPYGKLFL
Ga0182192_11674332	3300017430	Miscanthus Phyllosphere	RSSNIDEMVLATFAEKGPLPPMEEVYWMVLSVVGFVVVREAFIGMEPYGDLLWRIFSR
Ga0182206_10563552	3300017433	Miscanthus Phyllosphere	MSSWRSSNIDEMVLAAFAEKGPLPPKEEAHWRVLSIISFVVIREAFVGMEPYGKLFW
Ga0182206_10901721	3300017433	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFAEKGPLPPKEVAHWRVLHVTVFITVCGAFIGMVVDSFCRIFSG
Ga0182206_11547381	3300017433	Miscanthus Phyllosphere	TMLSWRTSNIDEMVLAAFVEKGPLLPKEEVHWRVLSFAGFIVVCEAFIGMEPYGKLFR
Ga0182209_11379591	3300017436	Miscanthus Phyllosphere	MSSWRSSTVDEMVLATFAEKGSLPPKEEARWRVLSVVDFAVVCEAFVGMKPYGKLFQ
Ga0182191_10659231	3300017438	Miscanthus Phyllosphere	MSSWRSSNVDEMVLVVFTEKGLLLPKEEMHWRVLSVVSFAVVHEAFVGMEPYGKLFL
Ga0182191_11397581	3300017438	Miscanthus Phyllosphere	MSGWRSSNIDEMVLAAFTKKGPLSPKEETHWRVLYITSFIPTYEAFVGMEPYGDLFW
Ga0182193_10702341	3300017443	Miscanthus Phyllosphere	MQRAMSSWRSSNIDEMVLATFAKKGPLPAKEEAHWRVPHVAGFVTVYEAFIGMELYVDF
Ga0182193_11136282	3300017443	Miscanthus Phyllosphere	SWRSSNVDEMVLAAFAEKGPLLPKEDAHRRVLSAVGFVIVYEAFVGMEPYRNFFR
Ga0182193_11958871	3300017443	Miscanthus Phyllosphere	MSSWRSSNIDEMVLATFAKKGPLPPKEEAHWRVLSVVGFAVVHEAFIRMEPYGNLFQRIFSERVLS
Ga0182218_11136201	3300017683	Miscanthus Phyllosphere	MSSWRSPNVDEMVLAAFAEKWLVLPKEVAHWRVPYVASFITVYEAFVGMEPYVDSFR
Ga0182218_11532531	3300017683	Miscanthus Phyllosphere	MSSWSSSNIDEMVLAAFTEKGPLLPKEEVHWRVLSVVGFVVVHEAFVR
Ga0182225_10154982	3300017684	Miscanthus Phyllosphere	MSSWRSSNIDEMVLDTFAKKGPLPPKEEAHWRVLSIVGFAVVREAFIGMELYRKLFQRIFSK
Ga0182225_10641151	3300017684	Miscanthus Phyllosphere	LSWRSPNVDEMVLAAFAEKGPLPPKEEVHWRVLRIIGFVVVCEAFLGMEPYIGFFW
Ga0182227_10844681	3300017685	Miscanthus Phyllosphere	MNRSTMSSWRSSNVDEIVLDAFAQKGPLLLKEEAHWRVLSIISFAIVRKAFVGMEPYGKF
Ga0182227_10914261	3300017685	Miscanthus Phyllosphere	MLSWRSSNVDEMVLAAFAEKGPLPLKEEAHWRVLSVVSFVIIRKAFVKMEPYGKLFQRIFSGRV
Ga0182227_11170482	3300017685	Miscanthus Phyllosphere	MSSWRSSIVDEMVLAAFAKKGLLPSKAVVHWRVLHIAVFVTVCEAFVG
Ga0182227_11328761	3300017685	Miscanthus Phyllosphere	STMLSWRSSNVDEMVLAAFTEKGPLPPKEEAHWRVLSIIGFVVVREALVGMEPY
Ga0182205_11595992	3300017686	Miscanthus Phyllosphere	MLSWRSSNVDDMVLAAFAEKGPLPPKEEAHWRVLSVVVFVVVCEAFIGMDLDGGLL
Ga0182223_10047232	3300017690	Miscanthus Phyllosphere	MSSWRSSNIDEMVLVAFTEKGPLLPKEEAHWRVLSVVGFAVVREAFVGMEPYGNLFR
Ga0182223_10378682	3300017690	Miscanthus Phyllosphere	MSSWRSSNIDEMGLAAFAEKGPLPPKEEAHWRVPPVAGFFPAYEAFLEMEPYEDLFR
Ga0182223_10839502	3300017690	Miscanthus Phyllosphere	AMLSWSSSNVDEMVLAAFTEKGPLPPKEEAHWRVLSVIDFVVVREAFVGVEPYWDLFW
Ga0182223_10947771	3300017690	Miscanthus Phyllosphere	MLSWRSSNIDEMVLAAFAEKGPLLPKDEAHWRVLSVVGFAVVREAFVGMEPH
Ga0182232_10760711	3300021060	Phyllosphere	MLSWRSSNIDKMVLAAFAEKGPLPPKEEAHWRVLRIAGFVTVCEAFVGMGPYGDFFR