Metagenome Family F098498

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098498
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	66 residues
Representative Sequence	MRALIPFAIVVFMSTFAAPQTLPVPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPDGK
Number of Associated Samples	84
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.22 %
% of genes near scaffold ends (potentially truncated)	99.03 %
% of genes from short scaffolds (< 2000 bps)	89.32 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.233 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.563 % of family members)
Environment Ontology (ENVO)	Unclassified (27.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.019 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.65% β-sheet: 0.00% Coil/Unstructured: 67.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00730	HhH-GPD	30.10
PF10576	EndIII_4Fe-2S	11.65
PF09335	SNARE_assoc	1.94
PF10282	Lactonase	1.94
PF13649	Methyltransf_25	1.94
PF00072	Response_reg	0.97
PF01270	Glyco_hydro_8	0.97
PF01648	ACPS	0.97
PF00149	Metallophos	0.97
PF13432	TPR_16	0.97
PF12674	Zn_ribbon_2	0.97
PF07994	NAD_binding_5	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	30.10
COG0177	Endonuclease III	Replication, recombination and repair [L]	30.10
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	30.10
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	30.10
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	30.10
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.94
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.94
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.94
COG1260	Myo-inositol-1-phosphate synthase	Lipid transport and metabolism [I]	0.97
COG3405	Endo-1,4-beta-D-glucanase Y	Carbohydrate transport and metabolism [G]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.23 %
Unclassified	root	N/A	7.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.23 %
Unclassified	root	N/A	7.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.23 %
Unclassified	root	N/A	7.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.79 %
Unclassified	root	N/A	7.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.53 %
Unclassified	root	N/A	7.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.53 %
Unclassified	root	N/A	7.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.53 %
Unclassified	root	N/A	7.77 %
Chloroflexi bacterium 13_1_40CM_55_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	4.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.77 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.80 %
Chloroflexi bacterium 13_1_40CM_55_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	4.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.97 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.83 %
Chloroflexi bacterium 13_1_40CM_55_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	4.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.91 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10212293	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300002245\|JGIcombinedJ26739_100437858	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300003505\|JGIcombinedJ51221_10426888	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300004091\|Ga0062387_101526077	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300004092\|Ga0062389_104347063	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005537\|Ga0070730_10835671	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005566\|Ga0066693_10025400	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1832	Open in IMG/M
3300005598\|Ga0066706_10114827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1979	Open in IMG/M
3300005602\|Ga0070762_10693751	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300005610\|Ga0070763_10574678	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300005712\|Ga0070764_10299918	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005712\|Ga0070764_11030673	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300005712\|Ga0070764_11047552	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300006050\|Ga0075028_100103559	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300006050\|Ga0075028_100162388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1186	Open in IMG/M
3300006050\|Ga0075028_100356623	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300006052\|Ga0075029_101351881	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300009500\|Ga0116229_11081804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	642	Open in IMG/M
3300009520\|Ga0116214_1044296	All Organisms → cellular organisms → Bacteria → Acidobacteria	1610	Open in IMG/M
3300009545\|Ga0105237_11635512	Not Available	651	Open in IMG/M
3300009551\|Ga0105238_10103856	All Organisms → cellular organisms → Bacteria	2823	Open in IMG/M
3300009624\|Ga0116105_1216907	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009700\|Ga0116217_10637831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	662	Open in IMG/M
3300010047\|Ga0126382_11738794	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300010341\|Ga0074045_10610744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300010366\|Ga0126379_10758273	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300010375\|Ga0105239_12452432	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300010376\|Ga0126381_101652882	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300011120\|Ga0150983_15262447	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300011120\|Ga0150983_16593897	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300011444\|Ga0137463_1089102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300012361\|Ga0137360_11715489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	534	Open in IMG/M
3300012922\|Ga0137394_10754728	Not Available	817	Open in IMG/M
3300012955\|Ga0164298_11330463	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300012971\|Ga0126369_11907924	Not Available	682	Open in IMG/M
3300012971\|Ga0126369_12252843	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300012971\|Ga0126369_13647526	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300015371\|Ga0132258_11107511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2002	Open in IMG/M
3300015374\|Ga0132255_105385272	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300016371\|Ga0182034_10977590	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300016422\|Ga0182039_11121976	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300016445\|Ga0182038_10826038	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300017939\|Ga0187775_10285120	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300017955\|Ga0187817_10255070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1117	Open in IMG/M
3300017955\|Ga0187817_10638391	Not Available	679	Open in IMG/M
3300017955\|Ga0187817_10828753	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300017970\|Ga0187783_10569377	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300017995\|Ga0187816_10477999	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300018042\|Ga0187871_10631023	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300018062\|Ga0187784_10136517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2003	Open in IMG/M
3300018062\|Ga0187784_10403451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1105	Open in IMG/M
3300018062\|Ga0187784_11567747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	521	Open in IMG/M
3300018085\|Ga0187772_10056811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2423	Open in IMG/M
3300018085\|Ga0187772_10078804	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300018088\|Ga0187771_10442170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300018088\|Ga0187771_11057149	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300018090\|Ga0187770_10356509	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300018433\|Ga0066667_12167605	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300020004\|Ga0193755_1070701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300020150\|Ga0187768_1161025	Not Available	518	Open in IMG/M
3300020579\|Ga0210407_11085413	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300020581\|Ga0210399_10037709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3867	Open in IMG/M
3300020581\|Ga0210399_11441792	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300020583\|Ga0210401_11045401	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300021046\|Ga0215015_10284559	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300021170\|Ga0210400_10919372	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300021171\|Ga0210405_10007146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9847	Open in IMG/M
3300021171\|Ga0210405_11167992	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300021178\|Ga0210408_11520107	Not Available	501	Open in IMG/M
3300021407\|Ga0210383_11529474	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300021433\|Ga0210391_10416571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300021433\|Ga0210391_11472990	Not Available	522	Open in IMG/M
3300021478\|Ga0210402_10781017	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300021559\|Ga0210409_10133558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2278	Open in IMG/M
3300025932\|Ga0207690_10167245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1644	Open in IMG/M
3300026078\|Ga0207702_10266804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1614	Open in IMG/M
3300027497\|Ga0208199_1099607	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300027604\|Ga0208324_1218366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	501	Open in IMG/M
3300027660\|Ga0209736_1196030	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300027783\|Ga0209448_10314893	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300027846\|Ga0209180_10586599	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300027867\|Ga0209167_10158580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300027889\|Ga0209380_10421300	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300027894\|Ga0209068_10862853	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300027903\|Ga0209488_11150106	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300027908\|Ga0209006_11212380	Not Available	589	Open in IMG/M
3300028381\|Ga0268264_10902029	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300028673\|Ga0257175_1035219	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300028906\|Ga0308309_10784278	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300028906\|Ga0308309_11852211	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300030494\|Ga0310037_10059295	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1811	Open in IMG/M
3300031719\|Ga0306917_10966060	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300031740\|Ga0307468_101159026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	693	Open in IMG/M
3300031823\|Ga0307478_10656152	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300031962\|Ga0307479_11112432	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300031981\|Ga0318531_10501982	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300032001\|Ga0306922_10232542	All Organisms → cellular organisms → Bacteria → Acidobacteria	1980	Open in IMG/M
3300032160\|Ga0311301_11806418	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300032828\|Ga0335080_10001562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	22450	Open in IMG/M
3300032898\|Ga0335072_10189262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2458	Open in IMG/M
3300033158\|Ga0335077_10010024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11775	Open in IMG/M
3300033158\|Ga0335077_10393011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1492	Open in IMG/M
3300033158\|Ga0335077_10988828	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.26%
Host-Associated	Host-Associated	8.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.70%
Aquatic	Environmental → Aquatic	14.56%
Plants	Host-Associated → Plants	8.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.70%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Sediment	Environmental → Aquatic → Sediment	5.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.88%
Peat Moss	Host-Associated → Plants → Peat Moss	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.50%
Loam	Environmental → Terrestrial → Soil → Loam	13.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102122931	3300000567	Peatlands Soil	MRIFFLFAIVIFMSTVVSNLSAEAQTLPVPQAITDPKQIASKPNAQVEQNQQSLSIEKLYMTRQIGRPS
JGIcombinedJ26739_1004378582	3300002245	Forest Soil	MRSLTLLAMVISMSTLTLPQTLPAPQAITDPKQITSKPNATVEQNQQSLSIERLYMTRSVGASAWSPDGKT
JGIcombinedJ51221_104268882	3300003505	Forest Soil	MRLAIPFVIAIMMSTLALAQTLPTPQAVTDPKQIASKPNAQVEKNLSIEKLYMTRQVGASDWSPDGKQIVFVLNMSGR
Ga0062387_1015260772	3300004091	Bog Forest Soil	LRKASFFLFILVMMMTLMSEVSGMAQTLPSPQAITDPKLVPVKPNAQVEQGQQSLSIERLYMTRQVGRPSWSPDGKEIVFVTN
Ga0062389_1043470631	3300004092	Bog Forest Soil	MRSVIPFAIVVFMSTFAAPQTLPVPQAVTDPKQITSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPDG
Ga0070730_108356711	3300005537	Surface Soil	MRTSFLFVIGVTISLLAETQTLPAPHAVTDPKQITSKPNANVEQFQESLSIEKLYMTRQVGRACW
Ga0066693_100254001	3300005566	Soil	MRAIIPFAIVMSMSTLTLAQILPAPKAITDPKQIGSKPNAQVEQNQQSLSIERLYMTRSV
Ga0066706_101148274	3300005598	Soil	MRILILIASVISMSILTPAQLLPLPPVITDPKQITSKPNAQVEQNQQSLSVERLYMTRSVGATAWSPDGKTIA
Ga0070762_106937512	3300005602	Soil	MRPFIPFAIVVFMSTIAASQTLPVPQAITDPKQITSKPNANVEQNQQSLSIEKLY
Ga0070763_105746781	3300005610	Soil	MRIPTLFAIVVFMSTLAAAQILPVPQAITDPKQIASKPNANVDQNQQSLSIEKLYMTRAVGSAAWSP
Ga0070764_102999182	3300005712	Soil	MRACTSLAMVIMMNTVIAASAQTLPAPQAITDPKLIVSKINASVEQGAQSLSIEKLYMTRSVGDTSWSPD
Ga0070764_110306731	3300005712	Soil	MLDFSHRMRILVWFFFALVILMNSIAAAQTLPVPKAVTDPKQITSRPNANVEQFQQSLAIEKLYMTRQIGPASWSPDG
Ga0070764_110475522	3300005712	Soil	MLKLLCFIIVALMVPLAPAQTAISLQAITDPKQITSKTNLNVEQFQQSLSIEKLYMT
Ga0075028_1001035591	3300006050	Watersheds	MRILIPFAIVMFMSSIAPAQTLPVPQAITDPKQIASKPNANVEQGQQSLSVEKLYMTRQ
Ga0075028_1001623881	3300006050	Watersheds	MRSLTLLAMVISMSTLTLPQTLPAPQAITDPKQITSKPNANVEQNQQSLSIERLYMTRSVGATT
Ga0075028_1003566231	3300006050	Watersheds	MRAFIVFVILTFMSTFAPAQTLPVPPAITDPKQIASKPNANVEQNQQSLSIEKL
Ga0075029_1013518811	3300006052	Watersheds	MRTLILVALASTMTTLLPAQTLPVPQAITDPKLITSKPDAQVEQNQQSLSIERLYMTRSVGAS
Ga0116229_110818042	3300009500	Host-Associated	MSTVSLSQILPVPKAITDPKQVPVKPNAQVEQSQQSLSIEKLYMTRQVGSPSWSPDG
Ga0116214_10442961	3300009520	Peatlands Soil	MRALIPFAIVVFMSTFAAPQTLPVPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPDGK
Ga0105237_116355121	3300009545	Corn Rhizosphere	MRMPISFAIVILMSTISLAQTLPLPQAITDPKQVQSKTSATVEQNQQSLSIERLYMTRAIGSTSWS
Ga0105238_101038565	3300009551	Corn Rhizosphere	MRTLILFAVFTSMSTLALTQKLPAPQAITDPKLITSKPNANVEQNQQSLSIERLFTTRSVGASAWSPDGKSV
Ga0116105_12169071	3300009624	Peatland	MRTFISFAIVIFMSAIVSHVSTAAQTLPVPQAITDPKQITSRPNANVEQNQQSLSIEKL
Ga0116217_106378311	3300009700	Peatlands Soil	MRIFFLFAIVIFMSTVVSNLSAEAQTLPVPQAITDPKQIASKPNAQVEQNQQSLSIEKLYMTRQIGRPSWSPDG
Ga0126382_117387941	3300010047	Tropical Forest Soil	MRTFTLFVIVIVMSTFTLAQTLPVPQAITDPKQVTSKSNAQVEQNEQSLSLERLYMTRSIGGTAWSPDGK
Ga0074045_106107442	3300010341	Bog Forest Soil	MRTFISFVVVILMSTFTAAQTLFLPQAITDPKQIASKPNANVEQNQQSLSIERLYMTRQV
Ga0126379_107582731	3300010366	Tropical Forest Soil	MFKFILIAIVLIMSTALEAQTLSVPTAITDPKQVNSKPSAQVEQADQSLSIERLYMTRAVGGSTW
Ga0105239_124524322	3300010375	Corn Rhizosphere	MRTPILLAIVISMSTLALPQKLPAPLAITDPKLISSKPNANVEQNQQSLSIERLFMTRSVGASAWSPDGK
Ga0126381_1016528822	3300010376	Tropical Forest Soil	MRFLLFAMVMSMSTIALPQALPLPAAITDPKQVTSKPSAQVEQNQQSLSIDRLYMTRTVGSASWSP
Ga0150983_152624471	3300011120	Forest Soil	MVVFMSTFAAAQTLPVPQAITDPKQITSKPNANIEQNQQSLSIEKLYMTRQVGRASWS
Ga0150983_165938972	3300011120	Forest Soil	MRPLIRFVIVIFMSTVTLGQSLPVPQAITDPKQIISKPNARVDQRSQSLSLEKLYMTRSIGGTAWSPDGK
Ga0137463_10891022	3300011444	Soil	MRTLTLLAMVISMSTVTLPQNLPAPQAITDPKQITSKPNAQVEQNQQSFSIERLYMTRSVGATAWSPDGKT
Ga0137360_117154891	3300012361	Vadose Zone Soil	MSTLVSAQTLPVPQAITDPKQIGSKPNGTVEKNLSIEKLYMTRQVGQPDWAPDGKT
Ga0137394_107547281	3300012922	Vadose Zone Soil	MRALIAFAMAIPMSTLVAAQTLPVPQAVTDPKQIASKPSGTVERNLSIEKLYMTRQVGQADWSPDGKT
Ga0164298_113304632	3300012955	Soil	MRTLILLAIVISMSTLALPQKLPAPQAITDPKLITSKPNANVEQNQQSLSIERLFMTRSVGA
Ga0126369_119079242	3300012971	Tropical Forest Soil	MRTIVLFAIVVFMSIVAETQTLPVPQAVTDPKQIASKPNGTVEKNLSIEKLYSTRQVGRSDWSPDGKQIVFVSN
Ga0126369_122528432	3300012971	Tropical Forest Soil	MSTLVVSQTLSVPQAITDPKQITSKSNANVEQNQQNLSIEKLYMARQIGGAAWSPDGK
Ga0126369_136475262	3300012971	Tropical Forest Soil	MRALFAFAIVIFMSTLTAAQSLPVPQAITDPKQITSKSNLQVEKSLTIEKLYMTRQINGADWSPDGKMIVFVANI
Ga0132258_111075115	3300015371	Arabidopsis Rhizosphere	MRTSSLLITVISMSTFMPAQTLPVPQAITDPKQITSKPNAQVEQNQQNLSVERLYMTRSFGATAWAPDSKTI
Ga0132255_1053852722	3300015374	Arabidopsis Rhizosphere	MRTSSLLITVISMSTFMPAQTLPVPQAITDPKQITSKPNAQVEQNQQNLSVERLYMTRSFGATAWARR
Ga0182034_109775901	3300016371	Soil	MFSGLMHTALRVVIVLTMSTLVVSQTLSVPQAITDPKQITSKSNANVEQNQQNLSIEKLYMARQIGGAAWSPDGKT
Ga0182039_111219762	3300016422	Soil	MHTALRVVIVLTMSTLVVSQTLSVPQAITDPKQITSKSNANVEQNQQNLSIEKLYMAR
Ga0182038_108260381	3300016445	Soil	MHTALRVVIVLTMSTLVVSQTLSVPQAITDPKQITSKSNANVEQNQQNLSIEKLYMARQIGG
Ga0187775_102851201	3300017939	Tropical Peatland	MRTLTRFVIVIVMSTIVSNVSASAQTLPVTGAITDPKQITSKSNAQVEQFQQNLSIEKLYMTRQVA
Ga0187817_102550701	3300017955	Freshwater Sediment	MRTVFLFVIVIFMSTVVSAAQTLPVPQAITDPKQITSKANANVEQNQQSLSIEKLFMTRQIGRSAWSPDGK
Ga0187817_106383912	3300017955	Freshwater Sediment	MRIILLFAIVVFMSSLVPSISAPAQTLAVPQAITDPKQITSKSNADVEQNQQSLSIEKLYMTRQIGRSAWSPDGK
Ga0187817_108287531	3300017955	Freshwater Sediment	MRTFISFAIVIVMSSFAPAQTLTVPPAITDPKQITSKPNAQVEQNQQSLSIEKLYMTRQV
Ga0187783_105693772	3300017970	Tropical Peatland	MHTALRFVMVLAMSTLVASQTLSVPQALTDPKQITGKSNANVEQNQQNLSIERLYMARQI
Ga0187816_104779992	3300017995	Freshwater Sediment	MRTFLLFAIVIIMVTFAPAQTPTAPQAITDPKQITSKPNANVEQFQQNLSIEKLYMTRQVGPASWSPDGKT
Ga0187871_106310231	3300018042	Peatland	MRTFISFAIVIFMSAIVSHVSTAAQTLPVPQAITDPKQITSRPNANVEQNQQSLSIEKLYMTRQVG
Ga0187784_101365174	3300018062	Tropical Peatland	MRTLISFAIVIFMTTLALAQTLPVPQAITDPKQIASKSSLEVEQFQQNLSIERLYMTRQVGGSSWSPDGG
Ga0187784_104034511	3300018062	Tropical Peatland	MQSLLETIMRTLVLFAIVIHMTTAALAQTQPVPPAITDPKQIASKSSLEVEQFQQNLSIERLYMTRQ
Ga0187784_115677471	3300018062	Tropical Peatland	MHTALRVVIVLTMSTLVVSETLSAPQAITDPKQITSKSNANVEQNQQNLSIERLYMARQIGGGAWSPDGR
Ga0187772_100568111	3300018085	Tropical Peatland	MRIWILFAIVILAVTLAPAETPTAPQAITDPKQITSKPNAKVEQFQQNLSIEKLYMTRQV
Ga0187772_100788043	3300018085	Tropical Peatland	MRAFILFALTTLALPQTLPVPQAITDPKQITSKPNASVEQNQQSLSIEKLYMTRQVGRAAWSP
Ga0187771_104421701	3300018088	Tropical Peatland	MRTLIPFAIVVFMTALAPAQTLPVPQAITDPKQIASKSSLEVEQFQQNLSIERLYMTRLVGGSSWSPDGKTVVF
Ga0187771_110571491	3300018088	Tropical Peatland	MRTLTLFVIVIIMSTFVGAQTLPAPLAITDPKQITAKPNANVEQSQQSLSIERLYMTRQ
Ga0187770_103565091	3300018090	Tropical Peatland	MQSLLETIMRTLVLFAIVIHMTTAALAQTQPVPPAITDPKQIASQSSLEVEQFQQNLSIERLYMTRL
Ga0066667_121676051	3300018433	Grasslands Soil	MRAIIPFAIVMSMSTLTLAQTLPAPKAITDPKQISSKPNAQVEQNQQSLSIERLYMTRS
Ga0193755_10707012	3300020004	Soil	MRTSILLATVIFMSTLTLAQTLPVPQVITDPKQITSKPNAQVEQNQQSLSVERLYMTRSV
Ga0187768_11610251	3300020150	Tropical Peatland	MRDCFLFAIVTLMSTFALPQTLTPHAITDPKQITSKPNANVEQGQQSLSVERLYMTRQVG
Ga0210407_110854131	3300020579	Soil	MRSLIPFAIVVFMSTFALAQTLPVLQAVTDPKQITSKPNANVEQNQQSLSIEKLYMT
Ga0210399_100377091	3300020581	Soil	MTKTSATLFLPSMRTLILFAIVISMCTLSLPQNLPAPHAITDPKQITSKPNANVEQNQQSLSIERLYMTRSVGATTWSPDGKTIPFVSNT
Ga0210399_114417922	3300020581	Soil	MRALISFAIVIFMTTLAPTQTLPAPQAITDPKQITSKPNPDVEQFQQNLSIERLYMTRQV
Ga0210401_110454012	3300020583	Soil	MRIHILFVIVVFTTTAVAAQTLPVPRAITDPKQITSKPNANVEQFQQSLAVEKLYMTRQIGPASWSPDGKQLVFVA
Ga0215015_102845592	3300021046	Soil	MRTLILFAIVISMCTLSPPQNLPAPHAITDPKQITSKPNANVEQNQQSLSIERLYMTRSVGATTLSLIHI
Ga0210400_109193721	3300021170	Soil	MRALIPFAIVVFMSTFAGPQTLPVPQAVTDPKQISSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPD
Ga0210405_1000714610	3300021171	Soil	MRIHILFVIVVFTTTAVAAQTLPVPRANTDPKQITSKPNANVEQFQQSLAVEKLYMTRQIGPASW
Ga0210405_111679922	3300021171	Soil	MRSLIPFAIVVFMSTFAAPQTLPAPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPDG
Ga0210408_115201072	3300021178	Soil	MRSLIPFAIVIVMSIVAATPIASAQTLPVPQAITDPKLITSKSSAEVEQGQQSLSVEKLYMTRQVGRASWS
Ga0210383_115294742	3300021407	Soil	MRTFISFAIVIFMSAIVSHVSTAAQTLPVPQAITDPKQITSKPNANVEQNQQSLSIEKLY
Ga0210391_104165712	3300021433	Soil	MLDFSHHMRTPFFPLFVIVVFMSTGAAAQTLPVPQAITDPKQINSKPNANVEQFSQSLAIEKLYMTRQIGAA
Ga0210391_114729901	3300021433	Soil	MRTLISFSMVILMSTSALAQALPVPQVITDPKQIASKPNANVEQSQQSLSIEKLYMTRQVGRS
Ga0210402_107810171	3300021478	Soil	MRSLVPFAIVVFMSTFAPAQTLPVLQAVTDPKQITSKPNANVEQNQQSLSIEKL
Ga0210409_101335584	3300021559	Soil	MRTLISFAIVILMSTFASAQTLPVPQVITDPKQIASKPNANVEQNQQSLSIEKLYMTRQV
Ga0207690_101672453	3300025932	Corn Rhizosphere	MRTLILFAVFTSMSTLALTQKLPAPQAITDPKLITSKPNANVEQNQQSLSIERLFMTRSVGASAW
Ga0207702_102668041	3300026078	Corn Rhizosphere	MSTRILLATVISISMSTLALPQNLPAPQAITDPKLITSKPNANVEQNQQSLSIERLYMTRSVGATTWSPDGKTIA
Ga0208199_10996071	3300027497	Peatlands Soil	MRALIPFAIVVFMSTFAAPQTLSVPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPDGKTIV
Ga0208324_12183661	3300027604	Peatlands Soil	MRLLISFAIVITMSSFAPAQTLTVPQAITDPKQITSKPSAQVEQNQQSLSIEKLYMTRQVGRASWSPDGKTI
Ga0209736_11960302	3300027660	Forest Soil	MLNLISFAIVVVMSSFASAQILPVPPAITDPKQIASKPNAQVEQNQQSFSIEKLYMTR
Ga0209448_103148931	3300027783	Bog Forest Soil	MRIRVSLFFAIVVATSAVAAAQTLPVPQAITDPKQITSKPNANVEQFSQSLAIEKLYMMRQIGPASWSPDGK
Ga0209180_105865992	3300027846	Vadose Zone Soil	MRTLILLATVISMNVLTPAETLPVPQAITDPKQITSKPNAQVEQNQQSLSVERLYMTRSVGATAWSPDG
Ga0209167_101585801	3300027867	Surface Soil	MRTFISFAIVIFMSVIVSHVNTAAQTLPVPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTRQIGR
Ga0209380_104213001	3300027889	Soil	MRTFISFAIVIFMSTFAVAQTLSVPQAITDPKQISSKPNANVEQSQQSLSIEKLYMTRQVGRASWS
Ga0209068_108628531	3300027894	Watersheds	MRAFIVFVILTFMSTFAPAQTLPVPPAITDPKQIASKPNANVEQNQQSLSIEKLYMKRQV
Ga0209488_111501061	3300027903	Vadose Zone Soil	MRSLTLFAMVISMSTLTLPQTLPAPQAITDPKQITSKPNANVEQNQQSFSIERLYMTRSV
Ga0209006_112123802	3300027908	Forest Soil	MRSVIPFAIVVFMSTFAAPQTLPVPQAVTDPKQITSKPNAKVEQNQQSLSIEKLYMT
Ga0268264_109020292	3300028381	Switchgrass Rhizosphere	MRTLILFAVFISMSALALTQKLPAPQAITDPKLITSKPNANVEQNQQSLSIERLFMTRSVGASAW
Ga0257175_10352192	3300028673	Soil	MRTLILFAIVTSMSTLASAQTLPVPQMITDPKQIMSKPNAQVEQNQQSLSIERLYMTRSVGATAWSPD
Ga0308309_107842782	3300028906	Soil	MRACTSLAMVIMMNTVIAASAQTLPAPQAITDPKLIVSKINASVEQGAQSLSIEKLYMTRSVGDTSW
Ga0308309_118522111	3300028906	Soil	MRSLIPFAIVVFMSTFAAPQTLPAPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTRQVGRASWSPDGKT
Ga0310037_100592953	3300030494	Peatlands Soil	MRIFFLFAIVIFMSTVVSNLSAEAQTLPVPQAITDPKQIASKPNAQVEQNQQSLSIEKLYMTRQIG
Ga0306917_109660602	3300031719	Soil	MRAITPFAMVIAMSTFASAQALPIPQAITDPKQIASKPNGTVEKNLSIEKLYMTRQVGRADWSPDGK
Ga0307468_1011590262	3300031740	Hardwood Forest Soil	MRALIAFAMAIPMSTLVAAQTLPVPQAVTDPKQISSKPNGTVEKNLSIEKLFMTRQVGRTDWSPDGKTVVFVSNIS
Ga0307478_106561521	3300031823	Hardwood Forest Soil	MRTFISFAIVIFMSAIVSHVSTAAQTLPVPQAITDPKQITSKPNANVEQNQQSLSIEKLYMTR
Ga0307479_111124321	3300031962	Hardwood Forest Soil	MRTPILLAIVIFMSTLTLPQNLPVPQAITDPKLITSKPNANVEQNQQSLSIERL
Ga0318531_105019822	3300031981	Soil	MRALITFAIVVGMNAVLTAQTLPVPKAITDPKEISSKPNAQVEKTLSIEKLYMTRQIGRPDWSPDGKQIVFV
Ga0306922_102325424	3300032001	Soil	MFSGLMHTALRVVIVLTMSTLVVSQTLSVPQAITDPKQITSKSNANVEQNQQNLSIEKLYMARQIGGAAWSPD
Ga0311301_118064181	3300032160	Peatlands Soil	MRLLISFAIVITMSSFAPARSLTVPQAITDPKQITSKSSAQVEQNQQSLSIEKLYMTRQVGRASWS
Ga0335080_1000156223	3300032828	Soil	MRSAALFAIVMVMSTLTPAQTLPAAKTITDPKQITSKPNAQVEQNEPSLSLERLYMTRA
Ga0335072_101892621	3300032898	Soil	MRPCILFAIVVLMVPFAPAQTSTAPHVITDPKQITSKPNANVEQFQQNLSIEK
Ga0335077_1001002413	3300033158	Soil	MRTFIPFVIVLFMSTLVAPQTLPVPQAITDPRQITSKSNANVEQNQQNLSIERLYMTRQVGRAS
Ga0335077_103930113	3300033158	Soil	MRKLTLFIMVTIMSTVFAEESIIAQSLPVPQAITDPRQITSKPNANVEQFQQNLSIEKLYMTRQVGRASWSPDGRKI
Ga0335077_109888282	3300033158	Soil	MRTFLPFAIVVLMSTFAASQVLPVPHAITDPKQITSKPNANVEQFQQNLSIERLYMTRQIGRASWSPDGKQIVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098498

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences