NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098483

Metagenome / Metatranscriptome Family F098483

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098483
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 45 residues
Representative Sequence MRALLLAVAIGAVLAVGAGLGAGAVLSGVANGKPVNAQLYNYGQR
Number of Associated Samples 60
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.52 %
% of genes near scaffold ends (potentially truncated) 20.39 %
% of genes from short scaffolds (< 2000 bps) 65.05 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.408 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(17.476 % of family members)
Environment Ontology (ENVO) Unclassified
(33.010 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.369 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 49.32%    β-sheet: 0.00%    Coil/Unstructured: 50.68%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00535Glycos_transf_2 56.31
PF13579Glyco_trans_4_4 4.85
PF11847DUF3367 4.85
PF11271PorA 3.88
PF08241Methyltransf_11 2.91
PF04030ALO 1.94
PF13692Glyco_trans_1_4 0.97
PF11255DUF3054 0.97
PF02720DUF222 0.97
PF08734GYD 0.97
PF13193AMP-binding_C 0.97
PF08281Sigma70_r4_2 0.97
PF12146Hydrolase_4 0.97
PF03466LysR_substrate 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 1.94
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.41 %
UnclassifiedrootN/A13.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004633|Ga0066395_11000899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia510Open in IMG/M
3300005332|Ga0066388_103899595Not Available761Open in IMG/M
3300005538|Ga0070731_10190505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1361Open in IMG/M
3300005602|Ga0070762_10038956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2579Open in IMG/M
3300005602|Ga0070762_10278222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1048Open in IMG/M
3300005602|Ga0070762_10758436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia654Open in IMG/M
3300005712|Ga0070764_10187885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1153Open in IMG/M
3300005712|Ga0070764_10517318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales719Open in IMG/M
3300005764|Ga0066903_100146375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3378Open in IMG/M
3300005764|Ga0066903_100598879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1909Open in IMG/M
3300006028|Ga0070717_10942300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales786Open in IMG/M
3300009519|Ga0116108_1001882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia10499Open in IMG/M
3300009637|Ga0116118_1100608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium970Open in IMG/M
3300009700|Ga0116217_10733093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium610Open in IMG/M
3300009792|Ga0126374_10426943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia934Open in IMG/M
3300009826|Ga0123355_10065356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora5858Open in IMG/M
3300009826|Ga0123355_11082620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia837Open in IMG/M
3300010043|Ga0126380_10002878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora6917Open in IMG/M
3300010043|Ga0126380_10867089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales746Open in IMG/M
3300010043|Ga0126380_12128532Not Available517Open in IMG/M
3300010048|Ga0126373_10003808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia11380Open in IMG/M
3300010048|Ga0126373_10030467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales4662Open in IMG/M
3300010048|Ga0126373_10138289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2301Open in IMG/M
3300010048|Ga0126373_10155745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2176Open in IMG/M
3300010048|Ga0126373_11330279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia784Open in IMG/M
3300010048|Ga0126373_13252330Not Available506Open in IMG/M
3300010049|Ga0123356_10660943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1212Open in IMG/M
3300010361|Ga0126378_10081525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3136Open in IMG/M
3300010361|Ga0126378_10604360All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300010366|Ga0126379_11257305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales846Open in IMG/M
3300010376|Ga0126381_104321549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia550Open in IMG/M
3300010379|Ga0136449_100269173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3143Open in IMG/M
3300016730|Ga0181515_1163632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium764Open in IMG/M
3300017822|Ga0187802_10195184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia778Open in IMG/M
3300017926|Ga0187807_1000817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9874Open in IMG/M
3300017926|Ga0187807_1230392Not Available604Open in IMG/M
3300017928|Ga0187806_1182804Not Available704Open in IMG/M
3300017928|Ga0187806_1296776Not Available569Open in IMG/M
3300017932|Ga0187814_10034083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1890Open in IMG/M
3300017942|Ga0187808_10026789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2365Open in IMG/M
3300017946|Ga0187879_10507978Not Available669Open in IMG/M
3300017955|Ga0187817_10071274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2162Open in IMG/M
3300017970|Ga0187783_10002496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales13654Open in IMG/M
3300017970|Ga0187783_10002657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales13249Open in IMG/M
3300017970|Ga0187783_10005369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura9458Open in IMG/M
3300017970|Ga0187783_10111871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea2012Open in IMG/M
3300017970|Ga0187783_10559118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales828Open in IMG/M
3300017970|Ga0187783_10607340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia791Open in IMG/M
3300017970|Ga0187783_11014063Not Available598Open in IMG/M
3300017972|Ga0187781_10004731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10135Open in IMG/M
3300017975|Ga0187782_10015545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales5547Open in IMG/M
3300018006|Ga0187804_10408996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia602Open in IMG/M
3300018008|Ga0187888_1196073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium804Open in IMG/M
3300018058|Ga0187766_10829928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales647Open in IMG/M
3300020583|Ga0210401_10061565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3534Open in IMG/M
3300021180|Ga0210396_10703441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia873Open in IMG/M
3300021401|Ga0210393_11078091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia649Open in IMG/M
3300021401|Ga0210393_11631609Not Available511Open in IMG/M
3300021402|Ga0210385_10700699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia775Open in IMG/M
3300021402|Ga0210385_11143608Not Available598Open in IMG/M
3300021402|Ga0210385_11211357Not Available579Open in IMG/M
3300021403|Ga0210397_10094492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2008Open in IMG/M
3300021403|Ga0210397_11116748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia613Open in IMG/M
3300021560|Ga0126371_10004330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12518Open in IMG/M
3300021560|Ga0126371_10022299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae5853Open in IMG/M
3300021560|Ga0126371_10036486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales4638Open in IMG/M
3300021560|Ga0126371_11844297All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300022708|Ga0242670_1046345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia607Open in IMG/M
3300025444|Ga0208189_1028467Not Available1142Open in IMG/M
3300027884|Ga0209275_10496400Not Available695Open in IMG/M
3300027908|Ga0209006_10048606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3815Open in IMG/M
3300030738|Ga0265462_12145564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia548Open in IMG/M
3300030937|Ga0138302_1587476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia518Open in IMG/M
3300031057|Ga0170834_100582602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia675Open in IMG/M
3300031231|Ga0170824_109242314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia697Open in IMG/M
3300031231|Ga0170824_112687699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia692Open in IMG/M
3300031231|Ga0170824_117233933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia545Open in IMG/M
3300031231|Ga0170824_127212814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1590Open in IMG/M
3300031469|Ga0170819_11998995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia664Open in IMG/M
3300031469|Ga0170819_12408537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia552Open in IMG/M
3300031474|Ga0170818_103796812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1181Open in IMG/M
3300031708|Ga0310686_117660752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1547Open in IMG/M
3300031708|Ga0310686_118195898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia852Open in IMG/M
3300031823|Ga0307478_10071549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2623Open in IMG/M
3300031896|Ga0318551_10733185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300031954|Ga0306926_12603775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia552Open in IMG/M
3300032160|Ga0311301_10255360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2882Open in IMG/M
3300032805|Ga0335078_10002624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia27111Open in IMG/M
3300032805|Ga0335078_10920428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1047Open in IMG/M
3300032895|Ga0335074_10002979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia23050Open in IMG/M
3300032895|Ga0335074_10005822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia17080Open in IMG/M
3300032895|Ga0335074_10006503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia16216Open in IMG/M
3300032895|Ga0335074_10070824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4710Open in IMG/M
3300032895|Ga0335074_10130621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3229Open in IMG/M
3300032895|Ga0335074_10358785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium1614Open in IMG/M
3300032895|Ga0335074_10871717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia823Open in IMG/M
3300032895|Ga0335074_10874753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales821Open in IMG/M
3300032896|Ga0335075_11495813Not Available562Open in IMG/M
3300032898|Ga0335072_10007362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia16031Open in IMG/M
3300032898|Ga0335072_10934107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia807Open in IMG/M
3300033134|Ga0335073_10191980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2544Open in IMG/M
3300033134|Ga0335073_11449305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia667Open in IMG/M
3300033828|Ga0334850_021225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1215Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil17.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil14.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.62%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland9.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment8.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil7.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.88%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.91%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.91%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.91%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.94%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.97%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025444Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030937Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033828Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066395_1100089923300004633Tropical Forest SoilMRGLLVAALIGAVLAIGAGFGAGAVLSGATNGKPVNATLFNYGQR*
Ga0066388_10389959523300005332Tropical Forest SoilMRALLIAVAVGAVLAAGAGLGAGALLAGVANGKPVNSQLYNYGQR*
Ga0070731_1019050523300005538Surface SoilMRALIISLAVGAVLAVAAGFGAGAVVSGVANGQPANSSLYNYGQR*
Ga0070762_1003895633300005602SoilMRALLISIAVGAVLAVGAGLGTGAIVVGVANGQPANTSIYNYGQR*
Ga0070762_1027822223300005602SoilMRALLVAVLVGAVLAIGAGFGTGAILSGVANGKPANTQLYNYGQR*
Ga0070762_1075843623300005602SoilMRALLISVAVGAVLAVAAGLGAGAVVSGVANGQPANSTLYNYGQR*
Ga0070764_1018788523300005712SoilMRALLVAVAIGAVLAVGAGLGAGSLLSGVANGKPANTQLYNYGQR*
Ga0070764_1051731823300005712SoilMKALLISVAVAAVLAVGAGLGGGALVASIANGQNSNQTLYNYGQR*
Ga0066903_10014637533300005764Tropical Forest SoilMRGLLIAALIGAVLAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0066903_10059887923300005764Tropical Forest SoilMRGLLIAALIGAILAVGAGYGTGAVLSGATNGKPVNATLFNYGQR*
Ga0070717_1094230023300006028Corn, Switchgrass And Miscanthus RhizosphereMRALLVAVAVGAILAIGAGFGTGAILSGVANGKPANTQLYNYGQR*
Ga0116108_1001882113300009519PeatlandMARLLVAVAIGAILAIGAGLVASTVLLGIANGKPANAQLYNYGQP*
Ga0116118_110060813300009637PeatlandIHSGRERLMARLLVAVAIGAILAIGAGLVASTVLLGIANGKPANAQLYNYGQP*
Ga0116217_1073309323300009700Peatlands SoilGLAVTLVDIHSGRERLMARLLVAVAIGAILAIGAGLVASTVLLGIANGKPANAQLYNYGQP*
Ga0126374_1042694313300009792Tropical Forest SoilTKGSAMRGLLIAALIGAVLAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0123355_1006535643300009826Termite GutMAMRGVLIAALIGAVLAVGAGFGTGAVLSGATNGKPVNTTLFNYGQR*
Ga0123355_1108262023300009826Termite GutMRGVLIAALIGAVLAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126380_1000287853300010043Tropical Forest SoilMAMRGLLIAALIGAILAVGAGYGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126380_1086708913300010043Tropical Forest SoilMRGLLIAALIGAVLAVGAGFGAGAVLSGATNGKPVNATLFNYGQR*
Ga0126380_1212853223300010043Tropical Forest SoilMRALIISVAVGAVLAVAAGFGAGAIAAGIDNGQPANTTLYNYGQR*
Ga0126373_10003808113300010048Tropical Forest SoilMAMRGLLVAALIGAILAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126373_1003046743300010048Tropical Forest SoilMRGLLIAALIGAILAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126373_1013828933300010048Tropical Forest SoilMRALLLAVAVGAVLALGAGLGTGALLSGVANGKPANTQLYNYGQR*
Ga0126373_1015574533300010048Tropical Forest SoilMRGLLIAALIGAVLAVGAGCGTGAVLSGVTNSKPVNATLFNYGQR*
Ga0126373_1133027913300010048Tropical Forest SoilMRGLLIAALIGAVLAVGAGLGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126373_1325233013300010048Tropical Forest SoilMAMRGLLIAALIGAVLAVGAGIGTGAVLSGATDGKPVNATLFNYGQR*
Ga0123356_1066094323300010049Termite GutMAMRGVLIAALIGAVLAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126378_1008152523300010361Tropical Forest SoilMRGLLIAALIGAILAVGAGLGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126378_1060436013300010361Tropical Forest SoilMALRGLLVAALIGAILAVGAGFGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126379_1125730523300010366Tropical Forest SoilMAMRGLLVAALIGAILAVGAGLGTGAVLSGATNGKPVNATLFNYGQR*
Ga0126381_10432154913300010376Tropical Forest SoilMSALIISLAVGAVLAVGAGFGAGAIVSGIANGQPANTTLYNYGQR*
Ga0136449_10026917323300010379Peatlands SoilMRALLVAVAVGAVLAVGAGLGTGALLSGVANGKPANTQLYNYGQR*
Ga0181515_116363223300016730PeatlandGRERLMARLLVAVAIGAILAIGAGLVASTVLLGIANGKPANAQLYNYGQP
Ga0187802_1019518423300017822Freshwater SedimentMRALLIAVVIGAVLAVGVGFAAGAVLSGVSNGKPVNTQLFNYGQR
Ga0187807_100081733300017926Freshwater SedimentMRGLLIAALIGAVLAAGAGFGTGAVLSGATNGKPVNATLFNYGQR
Ga0187807_123039213300017926Freshwater SedimentMRALLIAVAVGAVLAAGAGLGAGSLLAGVANGKPANSQLYNYGQR
Ga0187806_118280423300017928Freshwater SedimentMRALVVAILIGAVLAVGTGIGIGAVASGVDNGKPVNAQLYNYGQR
Ga0187806_129677613300017928Freshwater SedimentMRGLLIAALIGAVLAVGAGIGTGAVLSGATNGKPVNATLFNYGQR
Ga0187814_1003408323300017932Freshwater SedimentMRALLLAVAIGALLAVGAGLGTGALLAGFANGKPVNAQLYNYGER
Ga0187808_1002678923300017942Freshwater SedimentMRALLLAVAIGAVLAVGAGLGAGAVLSGVANGKPVNAQLYNYGQR
Ga0187879_1050797823300017946PeatlandMRALLVAVAIGAVLAIGAGLGTGALLSGVANGKPANTQLYNYGQR
Ga0187817_1007127413300017955Freshwater SedimentMRALLIAVVIGAVLAVGVGFAAGAVLSGVSNGKPVNTQLFNSRQR
Ga0187783_1000249683300017970Tropical PeatlandMAAEGQSMRAVLIAIVIGAVLAVGAGLGIGHVVAGIGNGKPVNAQLYNYGQR
Ga0187783_1000265723300017970Tropical PeatlandMRALLLAVLVGAVLAVGAGLGAGAVVSGIANGKPVNAQLYNYGQR
Ga0187783_1000536983300017970Tropical PeatlandMRALLISVIIGVVLAVAAGLGGGALVAGVANGQPSNNSLYNYGQR
Ga0187783_1011187133300017970Tropical PeatlandMRALLLAVAIGAVLAIGAGLGTGAILSGVANGKPVNAQLYNYGQR
Ga0187783_1055911823300017970Tropical PeatlandMRALLMAILIGAVLALGAGLGAGAVVSGIDNGKPVNAQLYNY
Ga0187783_1060734013300017970Tropical PeatlandMRALLISLAIGVVLAVAAGVGGGVLIAGVANGQPANTTLYNYGQR
Ga0187783_1101406323300017970Tropical PeatlandMRALLIAVAIGAILAAGAGLGAGALLAGVANGKPVNSQLYNYGQR
Ga0187781_1000473143300017972Tropical PeatlandMRALLMAILIGAVLAVGAGLGAGAVVSGIANGKPVNAQLYNYGQR
Ga0187782_1001554533300017975Tropical PeatlandMRALLMAILIGAVLAVGAGLGAGAVVSGIDNGKPVNAQLYNYGQR
Ga0187804_1040899613300018006Freshwater SedimentIGAVLAVGVGFAAGAVLSGVSNGKPVNTQLFNYGQR
Ga0187888_119607313300018008PeatlandRLMARLLVAVAIGAILAIGAGLVASTVLLGIANGKPANAQLYNYGQP
Ga0187766_1082992813300018058Tropical PeatlandMRALLLAVAIGAVLAVGAGVGAGAVLSGVANGKPVNAQFYNYGQR
Ga0210401_1006156523300020583SoilMRALLIAVVVGAVLAAGAGLGAGALFAGVANGKPANSQLYNYGQR
Ga0210396_1070344113300021180SoilMRALLIAVAVGVVLAVGAGLGTGALLAGVANGKPANAQLYNYGQR
Ga0210393_1107809113300021401SoilMRALIISLAVGAVLAVAAGLGAGAVVSGVANGQPANSTLYNYGQR
Ga0210393_1163160923300021401SoilMRALLISVAVGAVLAVAAGLGAGAVVSGVANGQPANSTLYNYG
Ga0210385_1070069923300021402SoilWCMRALIISLAVGAVLAVAAGFGAGAVVSGVANGQPANSSLYNYGQR
Ga0210385_1114360823300021402SoilMRALLLAVAIGAVLAVGAGLGTGAILAGVANGKPVNAQLYNYGQR
Ga0210385_1121135723300021402SoilMRALLISIAVGAVLAVGAGLGTGAIVVGVANGQPANTSIYNYGQR
Ga0210397_1009449223300021403SoilMRALIISLAVGAVLAVAAGFGAGAVVSGVANGQPANSSLYNYGQR
Ga0210397_1111674813300021403SoilMRALLISVAVGAVLAVAAGLGAGAVVSGVANGQPANSTLYNYGQR
Ga0126371_1000433083300021560Tropical Forest SoilMRGLLIAALIGAVLAVGAGFGTGAVLSGATNGKPVNATLFNYGQR
Ga0126371_1002229943300021560Tropical Forest SoilMRGLLIAALIGAILAVGAGYGTGAVLSGATNGKPVNATLFNYGQR
Ga0126371_1003648653300021560Tropical Forest SoilMRGLLIAALIGAVLAVGAGLGTGAVLSGATNGKPVNATLFNYGQR
Ga0126371_1184429713300021560Tropical Forest SoilMRGLLVAALIGAILAVGAGFGTGAVLSGATNGKPVNATLFNYGQR
Ga0242670_104634523300022708SoilHMRALLIAVVVGAVLAAGAGLGAGALFAGVANGKPANSQLYNYGQR
Ga0208189_102846713300025444PeatlandMARLLVAVAIGAILAIGAGLVASTVLLGIANGKPANAQLYNYGQP
Ga0209275_1049640023300027884SoilMRALLVAVLVGAVLAIGAGFGTGAILSGVANGKPANTQLYNYGQR
Ga0209006_1004860633300027908Forest SoilMRALIISLAVGAVLAVAAGLGAGAVVSGVANGQPANSSLYNYGQR
Ga0265462_1214556423300030738SoilLAVGAVLAVAAGLGAGAVVSGVANGQPANSSLYNYGQR
Ga0138302_158747613300030937SoilHAKERHMRALLIAVVVGAVLAAGAGLGAGALFAGVANGKPANSQLYNYGQR
Ga0170834_10058260213300031057Forest SoilMRGLLVSIAVGAVLAVAAGLGTGSILAGVSNGKPANTELYNYGQR
Ga0170824_10924231423300031231Forest SoilMRALIISVAVGVVLAVAAGLGAGAVVSGVANGQPANSTLYNYGQR
Ga0170824_11268769923300031231Forest SoilHAKERHMRALLIAVVVGAVLAAGAGLGAGALFAGVTNGKPANSQLYNYGQR
Ga0170824_11723393323300031231Forest SoilLVSIAVGAVLAVAAGLGTGSILAGVSNGKPANTELYNYGQR
Ga0170824_12721281433300031231Forest SoilKERQMRALLAAVAIGTVLAVGAGLGTGALLSGVANGKPANTQLYNYGQR
Ga0170819_1199899513300031469Forest SoilPKEWGMRALIISVAVGVVLAVAAGLGAGAVVSGVANGQPANSTLYNYGQR
Ga0170819_1240853713300031469Forest SoilERQMRALLVAVVVGVVLAVGAGLGTGALLAGVANGKPANAQLYNYGQR
Ga0170818_10379681213300031474Forest SoilMRALLAAVAIGAVLAIGAGLGTGALLSGVANGKPANTQLYNYGQR
Ga0310686_11766075223300031708SoilMRALLVAVAVGAVLAAGAGLGTGALLSGVANGKPANTQLYNYGQR
Ga0310686_11819589823300031708SoilMRALLISIAIGAVLAVGAGLGTGAIVVGVANGQPANTSIYNYGQR
Ga0307478_1007154923300031823Hardwood Forest SoilMKALLIAVVVGAVLAAGAGLGAGALLAGVANGKPANSQLYNYGQR
Ga0318551_1073318513300031896SoilRQMRALLIAVVVGTVLAVGAGLGTGALLAGVANGKPANAQLYNYGQR
Ga0306926_1260377523300031954SoilATLTERIEERQMRALLIAVVVGTVLAVGAGLGTGALLAGVANGKPANAQLYNYGQR
Ga0311301_1025536033300032160Peatlands SoilMRALLVAVAVGAVLAVGAGLGTGALLSGVANGKPANTQLYNYGQR
Ga0335078_10002624203300032805SoilMRALIISVAVGAVLAVAAGFGAGAVVSGIANGQPANTTLYNYGQR
Ga0335078_1092042813300032805SoilMRALIISLAVGAVLAIAAGFGAGAVVSGVANGQPANSSLYNYGQR
Ga0335074_10002979113300032895SoilMKALLIAVVVGAVLAAGAGLGAGALLAGVANGKPANSQLFNYGQR
Ga0335074_1000582283300032895SoilMRALLIAVAIGAILAAGAGLGAGAVLSGVANGKPVNAQLYNYGQR
Ga0335074_1000650383300032895SoilMRALLIAVAIGLVLAVGAGLGSGAILSGVSNGKPVNAQLFNYGQR
Ga0335074_1007082453300032895SoilMRALLIAVAVGAILAAGAGLGAGALLAGVANGKPVNSQLYNYGQR
Ga0335074_1013062133300032895SoilMRALLIAVVVGAVLAAGAGLGAGALLAGVANGKPANSQLYNYGQR
Ga0335074_1035878523300032895SoilLMRALLIAVAIGAILAAGAGLGAGAVLSGVANGKPVNAQLYNYGQR
Ga0335074_1087171723300032895SoilMRALLVAVVVGAVLAAGAGLGAGALLAGVANGKPANSQLYNYGQR
Ga0335074_1087475323300032895SoilMRAVLVAILIGAVLAVGAGLGIGQVVSGVGNGKPVNAQLYNYGQR
Ga0335075_1149581313300032896SoilMLMRALLIAVAIGAILAAGAGLGAGAVLSGVANGKPVNAQLYNYGQR
Ga0335072_1000736243300032898SoilMRALLLAVAIGAVLAVGAGVGAGAVLSGVANGKPVNAQLYNYGTR
Ga0335072_1093410713300032898SoilMRALLVAVVIGAVLAVGAGLGTGALLQGVANGKPANTQLYNYGQR
Ga0335073_1019198033300033134SoilMKALLIAVVVGAVLAAGAGLGAGALLAGVANGKPAN
Ga0335073_1144930513300033134SoilMRALLISVAIAAVLAVGAGLGGGALVASIANGQNSNQTLYNYGQR
Ga0334850_021225_3_1193300033828SoilMRALLVAVAIGAVLAIGAGLGTGALLSGVANGKPANTQL


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